# terms

id: GO:0097591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibrillar repetitive structure surrounding the ventral disc edge in Giardia species (trophozoite stage). The composition of the lateral crest is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc lateral crest","synonyms":[{"name":"lateral crest","type":"broad"},{"name":"ventral disk lateral crest","type":"related"}],"termid":"GO:0097591"}


id: GO:0010927
data:
  {"annotated_genes":["SJAG_04509","SJAG_00663","SJAG_02379","SJAG_03250","SJAG_02169","SJAG_03536","SJAG_05309","SJAG_02989","SJAG_04922","SJAG_00826","SJAG_01769","SJAG_04470","SJAG_03746","SJAG_04271","SJAG_00405","SJAG_04781","SJAG_04080","SJAG_02700","SJAG_02864","SJAG_02736","SJAG_01993","SJAG_04275","SJAG_00514","SJAG_04615","SJAG_04238","SJAG_04010","SJAG_02248","SJAG_02320","SJAG_00114","SJAG_03453","SJAG_01943","SJAG_00974","SJAG_04483","SJAG_03915","SJAG_03688","SJAG_02241","SJAG_00971","SJAG_01894","SJAG_01794","SJAG_01321","SJAG_03483","SJAG_00486","SJAG_01483","SJAG_04901","SJAG_02529","SJAG_00821","SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109296,112876,83988,87420,85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"},{"annotations":[100364,104624,87155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[105418,93137,109155,113603,102744,112064,94358,86953,113887,90954,100676,93096,95395,97186,114061],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[93097,95329,98356,95328,87932,103082,109156,99562,102202,92435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[93828,94429,94508,109534,88141,84033],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[86426],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[85589,86534,83684,89105,106625],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[90114,95331,95330,95608,101401,111134],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular component assembly that is part of the initial shaping of the component during its developmental progression.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cellular anatomical entity morphogenesis","termid":"GO:0032989"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cellular component assembly involved in morphogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010927","terms_by_termid":{"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0070583":null,"GO:1902917":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0075687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Snf2 related CREBBP activator protein","termid":"PBO:0075687"}


id: GO:1902522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4'-epidoxorubicin stimulus.","definition_xrefs":["PMID:23648065","GOC:TermGenie","GOC:dw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 4'-epidoxorubicin","synonyms":[{"name":"response to epirubicin","type":"related"}],"termid":"GO:1902522"}


id: MOD:00649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylated residue","synonyms":[{"name":"AcylRes","type":"exact"}],"termid":"MOD:00649"}


id: PATO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aerobic","termid":"PATO:0001455"}


id: PBO:0064677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 13","termid":"PBO:0064677"}


id: PBO:0059436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A6A","termid":"PBO:0059436"}


id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: GO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root cap mucilage metabolic process","termid":"GO:0048360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage biosynthetic process","synonyms":[{"name":"root cap mucilage anabolism","type":"exact"},{"name":"root cap mucilage biosynthesis","type":"exact"},{"name":"root cap mucilage formation","type":"exact"},{"name":"root cap mucilage synthesis","type":"exact"}],"termid":"GO:0048355"}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: GO:0051403
data:
  {"annotated_genes":["SJAG_03185","SJAG_01587","SJAG_03903","SJAG_03263","SJAG_02135","SJAG_04777","SJAG_03828","SJAG_04503","SJAG_03753","SJAG_02000","SJAG_02013","SJAG_02945","SJAG_02342","SJAG_06621","SJAG_06622","SJAG_00318","SJAG_02183","SJAG_03384","SJAG_03893","SJAG_06592","SJAG_04551","SJAG_04825","SJAG_01114","SJAG_00027","SJAG_00117","SJAG_02392","SJAG_05000","SJAG_04522","SJAG_01181","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95464],"is_not":false,"summary":null,"term":"GO:0051403"},{"annotations":[106249,87902,97604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[102412,113385,99237,91432,94951,102973],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[112209,87317,113386,90627,94953,91554],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903753"},{"annotations":[89980,70496,105632,97229,72911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038066"},{"annotations":[104274,104268,104269,104273,104272,113352,107081,107723,104270,90843,104271],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which a stress-activated MAP kinase cascade relays a signal; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase.","definition_xrefs":["PMID:15936270","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"is_a","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00117":null,"SJAG_00318":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01587":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02342":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03384":null,"SJAG_03753":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04503":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04777":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"MAPK11 cascade","type":"narrow"},{"name":"MAPK12 cascade","type":"narrow"},{"name":"MAPK13 cascade","type":"narrow"},{"name":"MAPK14 cascade","type":"narrow"},{"name":"SAPK cascade","type":"broad"},{"name":"p38 MAPK signaling","type":"narrow"},{"name":"p38 MAPK signalling","type":"narrow"},{"name":"p38 cascade","type":"narrow"},{"name":"stress-activated MAPK signaling pathway","type":"exact"},{"name":"stress-activated MAPK signalling pathway","type":"exact"},{"name":"stress-activated MAPKKK cascade","type":"exact"},{"name":"stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0051403","terms_by_termid":{"GO:0000196":null,"GO:0038066":null,"GO:0051403":null,"GO:1900745":null,"GO:1903138":null,"GO:1903753":null}}


id: GO:1903918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23325791","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament severing","synonyms":[{"name":"regulation of F-actin severing","type":"exact"},{"name":"regulation of actin filament severing activity","type":"related"},{"name":"regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903918"}


id: PBO:0063594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 7","termid":"PBO:0063594"}


id: PBO:0073263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 7","termid":"PBO:0073263"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:10891884","GOC:mah","PMID:15560120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042534","GO:1904467"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: PBO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amiloride","termid":"PBO:0031305"}


id: FYPO:0008110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of the adenine residue at position 64 in an U6 snRNA molecule is decreased.","definition_xrefs":["PMID:37403782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased U6 2'-O-snRNA methylation at residue A64","termid":"FYPO:0008110"}


id: GO:1903542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GO_REF:0000058","PMID:24105262","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of exosomal secretion","termid":"GO:1903541"},{"relation_name":"negatively_regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of exosomal secretion","synonyms":[{"name":"down regulation of exosomal protein secretion","type":"narrow"},{"name":"down regulation of exosomal secretion","type":"exact"},{"name":"down regulation of exosomal secretory pathway","type":"exact"},{"name":"down regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down regulation of secretion of exosome","type":"exact"},{"name":"down-regulation of exosomal protein secretion","type":"narrow"},{"name":"down-regulation of exosomal secretion","type":"exact"},{"name":"down-regulation of exosomal secretory pathway","type":"exact"},{"name":"down-regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"down-regulation of secretion of exosome","type":"exact"},{"name":"downregulation of exosomal protein secretion","type":"narrow"},{"name":"downregulation of exosomal secretion","type":"exact"},{"name":"downregulation of exosomal secretory pathway","type":"exact"},{"name":"downregulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"downregulation of secretion of exosome","type":"exact"},{"name":"inhibition of exosomal protein secretion","type":"narrow"},{"name":"inhibition of exosomal secretion","type":"narrow"},{"name":"inhibition of exosomal secretory pathway","type":"narrow"},{"name":"inhibition of extracellular vesicular exosome secretion","type":"narrow"},{"name":"inhibition of secretion of exosome","type":"narrow"},{"name":"negative regulation of exosomal protein secretion","type":"narrow"},{"name":"negative regulation of exosomal secretory pathway","type":"exact"},{"name":"negative regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"negative regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903542"}


id: PBO:0065210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog B","termid":"PBO:0065210"}


id: PBO:0082885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with and phosphorylated by Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcription, specifically required for Gcn4p degradation, may be sensor of cellular protein biosynthetic capacity","termid":"PBO:0082885"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: PBO:0090683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein","termid":"PBO:0090683"}


id: PBO:0044264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 2","termid":"PBO:0044264"}


id: GO:0044750
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111161],"is_not":false,"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of nickel (Ni) cations from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044750","terms_by_termid":{"GO:0044750":null}}


id: PBO:0070206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 133 pseudogene","termid":"PBO:0070206"}


id: PBO:0005884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Threonine, mitochondrial","termid":"PBO:0005884"}


id: PBO:0050007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction recognition protein","termid":"PBO:0050007"}


id: GO:0006564
data:
  {"annotated_genes":["SJAG_02313","SJAG_04964","SJAG_02791","SJAG_04449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72998,78289,95753,112047],"is_not":false,"summary":null,"term":"GO:0006564"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"serine family amino acid biosynthetic process","termid":"GO:0009070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null,"SJAG_04449":null,"SJAG_04964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-serine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SERSYN-PWY"],"synonyms":[{"name":"L-serine anabolism","type":"exact"},{"name":"L-serine biosynthesis","type":"exact"},{"name":"L-serine formation","type":"exact"},{"name":"L-serine synthesis","type":"exact"}],"termid":"GO:0006564","terms_by_termid":{"GO:0006564":null}}


id: PBO:0068853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 91, pseudogene","termid":"PBO:0068853"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_02440","SJAG_01400","SJAG_02877","SJAG_00321","SJAG_02322","SJAG_03399","SJAG_02019","SJAG_03850","SJAG_03631","SJAG_04028","SJAG_05229","SJAG_01090","SJAG_02532","SJAG_03873","SJAG_04668","SJAG_04096","SJAG_04698","SJAG_03895","SJAG_04551","SJAG_04757","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92912,91217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[87987,88033,73884,109644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[110720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[91039,90414,73284,97113,91564,77267,104692,72359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[86868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[108586,86886],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[97607],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[72634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[103997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:0043818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + precorrin-3A = H2O + NAD+ + precorrin-3B.","definition_xrefs":["EC:1.14.13.83","RHEA:17293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"precorrin-3B synthase activity","secondary_identifiers":["KEGG_REACTION:R05217","MetaCyc:R321-RXN"],"synonyms":[{"name":"CobG","type":"related"},{"name":"precorrin-3A,NADH:oxygen oxidoreductase (20-hydroxylating)","type":"exact"},{"name":"precorrin-3X synthase activity","type":"related"}],"termid":"GO:0043818"}


id: MOD:02003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-serine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O3-acylated L-serine","termid":"MOD:02003"}


id: PBO:0029859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_vegetative_cell_population_(obsolete_FYPO:0002378)","termid":"PBO:0029859"}


id: PBO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 13","termid":"PBO:0075157"}


id: PBO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease tRNAse Z, Trz2","termid":"PBO:0015681"}


id: PBO:0085925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole; YLL025W is not an essential gene","termid":"PBO:0085925"}


id: GO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of muscle cell differentiation","termid":"GO:0051148"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"negatively_regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of striated muscle cell differentiation","synonyms":[{"name":"down regulation of striated muscle cell differentiation","type":"exact"},{"name":"down-regulation of striated muscle cell differentiation","type":"exact"},{"name":"downregulation of striated muscle cell differentiation","type":"exact"},{"name":"inhibition of striated muscle cell differentiation","type":"narrow"}],"termid":"GO:0051154"}


id: PBO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A12","termid":"PBO:0044104"}


id: PBO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.14","termid":"PBO:0000695"}


id: GO:1902436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male mating behavior.","definition_xrefs":["GOC:TermGenie","PMID:24089208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male mating behavior","synonyms":[{"name":"down regulation of male mating behavior","type":"exact"},{"name":"down-regulation of male mating behavior","type":"exact"},{"name":"downregulation of male mating behavior","type":"exact"},{"name":"inhibition of male mating behavior","type":"narrow"}],"termid":"GO:1902436"}


id: PBO:0070237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 175 pseudogene","termid":"PBO:0070237"}


id: PBO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliomedin","termid":"PBO:0048679"}


id: FYPO:0003194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, occurs at a greater rate, or speed, than normal.","definition_xrefs":["GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule stability during vegetative growth","type":"related"},{"name":"increased microtubule depolymerization rate during vegetative growth","type":"exact"},{"name":"increased rate of microtubule catastrophe during vegetative growth","type":"related"},{"name":"increased rate of microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"increased rate of microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule shrinkage during vegetative growth","type":"related"}],"termid":"FYPO:0003194"}


id: GO:0004198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase activity","secondary_identifiers":["Reactome:R-HSA-8863012","Reactome:R-HSA-8848658"],"synonyms":[{"name":"calpain activity","type":"narrow"}],"termid":"GO:0004198"}


id: PBO:0077868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 9","termid":"PBO:0077868"}


id: PBO:0063999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 33","termid":"PBO:0063999"}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: FYPO:0007590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is abnormal.","definition_xrefs":["GO:0000422","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal autophagy","termid":"FYPO:0008082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitophagy","synonyms":[{"name":"abnormal autophagy of mitochondrion","type":"exact"}],"termid":"FYPO:0007590"}


id: PBO:0084423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isozyme of methylenetetrahydrofolate reductase; catalyzes the reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate in the methionine biosynthesis pathway","termid":"PBO:0084423"}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: GO:0008997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction, leaving an undigested core of 3-5 nucleotides.","definition_xrefs":["PMID:11948193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"ribonuclease R activity","secondary_identifiers":["EC:3.1.11.-"],"termid":"GO:0008997"}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["CL:0000624","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: PBO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 13","termid":"PBO:0047359"}


id: PBO:0064082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase","termid":"PBO:0064082"}


id: GO:1902577
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93972],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a medial cortical node.","definition_xrefs":["GOC:TermGenie","PMID:24127216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in medial cortical node","type":"exact"},{"name":"protein localisation to medial cortical node","type":"exact"},{"name":"protein localization in medial cortical node","type":"exact"}],"termid":"GO:1902577","terms_by_termid":{"GO:0120047":null}}


id: GO:1904875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["PMID:17389648","GOC:BHF_telomere","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA ligation","termid":"GO:0051105"},{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA ligase activity","termid":"GO:1904875"}


id: PBO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A8","termid":"PBO:0072747"}


id: FYPO:0000953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to a chemical stimulus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal cellular response to chemical stimulus","termid":"FYPO:0000953"}


id: PBO:0080959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB2 pseudogene 1","termid":"PBO:0080959"}


id: PBO:0039372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMMECR1 like pseudogene 1","termid":"PBO:0039372"}


id: PBO:0045209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C4","termid":"PBO:0045209"}


id: GO:0030684
data:
  {"annotated_genes":["SJAG_00772","SJAG_01907","SJAG_00245","SJAG_02436","SJAG_03569","SJAG_01764","SJAG_04847","SJAG_02250","SJAG_00882","SJAG_00344","SJAG_02662","SJAG_04491","SJAG_04475","SJAG_00744","SJAG_04492","SJAG_00838","SJAG_00142","SJAG_04992","SJAG_03341","SJAG_04033","SJAG_03466","SJAG_02046","SJAG_01581","SJAG_03458","SJAG_01115","SJAG_00294","SJAG_00945","SJAG_02427","SJAG_03496","SJAG_03413","SJAG_01839","SJAG_04395","SJAG_01618","SJAG_03410","SJAG_04611","SJAG_03697","SJAG_00253","SJAG_01272","SJAG_02300","SJAG_05018","SJAG_00538","SJAG_00271","SJAG_02759","SJAG_00879","SJAG_01275","SJAG_01877","SJAG_03539","SJAG_03028","SJAG_03931","SJAG_04979","SJAG_02830","SJAG_00311","SJAG_03719","SJAG_03654","SJAG_00897","SJAG_00562","SJAG_05186","SJAG_03252","SJAG_02681","SJAG_01169","SJAG_03012","SJAG_00689","SJAG_03156","SJAG_02024","SJAG_05187","SJAG_01420","SJAG_01454","SJAG_04330","SJAG_01606","SJAG_04069","SJAG_02377","SJAG_00657","SJAG_02287","SJAG_02530","SJAG_02025","SJAG_02350","SJAG_02608","SJAG_04424","SJAG_01799","SJAG_01338","SJAG_03617","SJAG_00965","SJAG_01821","SJAG_02372","SJAG_00722","SJAG_04919","SJAG_00572","SJAG_01752","SJAG_04224","SJAG_04908","SJAG_00943","SJAG_03846","SJAG_03077","SJAG_04346","SJAG_01494","SJAG_01811","SJAG_04339","SJAG_02702"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85667,110487],"is_not":false,"summary":null,"term":"GO:0030684"},{"annotations":[102396,88237,73280,111702,75299,110870,76904,70591,75122,71105,111887,97049,108299,75645,71921,96071,72629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030686"},{"annotations":[75257,77254,78770],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[78736,93429,72498],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[78737,72499,107678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"},{"annotations":[72441,77588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[73387,74388,75348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[75347,98931,113267,75338,74632,77543,88826,111392,75505,78184,78578,72173,93518,76302,94699,101390,74387,90431,94963,77973,71360,71591,75854,72291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030687"},{"annotations":[97052,102334,108221,70174,71343,108130,73854,74293,74626,70592,78118,78168,106323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030688"},{"annotations":[75847,71767,73020,71384,78374],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[72630,78162,71099,75300,110375,78360,71111,84978,77385,71544,74883,76129,112523,74862,77894,72442,75846,77589,83538,74686,76643,77136,73019,70735,75256,101602,105497,73082,77253,87691,75646,108758,78373,105854,96891,71383,73978,94319,78769,88260,86897,72528,71766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032040"},{"annotations":[77387,89356,74262,75632,77040],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"Any complex of pre-rRNAs, ribosomal proteins, and associated proteins formed during ribosome biogenesis.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein 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id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: PR:O94501
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.03","secondary_identifiers":["UniProtKB:O94501"],"synonyms":[{"name":"CCT-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT1","type":"exact"},{"name":"TCP-1-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94501"}


id: SO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A minicircle is a replicon, part of a kinetoplast, that encodes for guide RNAs.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minicircle","secondary_identifiers":["SO:0000974","http://en.wikipedia.org/wiki/Minicircle"],"synonyms":[{"name":"minicircle_chromosome","type":"exact"}],"termid":"SO:0000980"}


id: FYPO:0003580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Sad1 accumulates is greater than normal during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Sad1 foci during response to DNA damage","synonyms":[{"name":"increased number of Sad1 foci during DNA damage response","type":"exact"},{"name":"increased number of Sad1 foci during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased number of Sad1 foci during response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003580"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: PR:Q9Y7Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qrs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.02","synonyms":[{"name":"GlnRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qrs1","type":"exact"},{"name":"glutaminyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y8"}


id: PBO:0083647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongin A; F-box protein that forms a heterodimer with Elc1p and is required for ubiquitin-dependent degradation of the RNA Polymerase II subunit Rpo21p; subunit of the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0083647"}


id: GO:0033686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"},{"relation_name":"positively_regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of luteinizing hormone secretion","synonyms":[{"name":"activation of luteinizing hormone secretion","type":"narrow"},{"name":"stimulation of luteinizing hormone secretion","type":"narrow"},{"name":"up regulation of luteinizing hormone secretion","type":"exact"},{"name":"up-regulation of luteinizing hormone secretion","type":"exact"},{"name":"upregulation of luteinizing hormone secretion","type":"exact"}],"termid":"GO:0033686"}


id: GO:0099529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane that is involved in regulating postsynaptic membrane potential, either directly (ionotropic receptors) or indirectly (e.g. via GPCR activation of an ion channel).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}


id: PBO:0049949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 2","termid":"PBO:0049949"}


id: PBO:0077069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3 pseudogene 1","termid":"PBO:0077069"}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: GO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by norepinephrine","termid":"GO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating norepinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating noradrenaline","type":"exact"}],"termid":"GO:0003114"}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10372961","GOC:yaf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: PBO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0035869"}


id: GO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-matrix adhesion","termid":"GO:0001952"}


id: PBO:0069346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 606, pseudogene","termid":"PBO:0069346"}


id: GO:0010661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle cell apoptotic process","synonyms":[{"name":"positive regulation of muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010661"}


id: PBO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG2 catalytic domain","termid":"PBO:0018183"}


id: PBO:0075448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2 like","termid":"PBO:0075448"}


id: GO:1900311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose metabolic process","termid":"GO:1900309"},{"relation_name":"positively_regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of maltoheptaose metabolic process","synonyms":[{"name":"activation of maltoheptaose metabolic process","type":"narrow"},{"name":"activation of maltoheptaose metabolism","type":"narrow"},{"name":"positive regulation of maltoheptaose metabolism","type":"exact"},{"name":"up regulation of maltoheptaose metabolic process","type":"exact"},{"name":"up regulation of maltoheptaose metabolism","type":"exact"},{"name":"up-regulation of maltoheptaose metabolic process","type":"exact"},{"name":"up-regulation of maltoheptaose metabolism","type":"exact"},{"name":"upregulation of maltoheptaose metabolic process","type":"exact"},{"name":"upregulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900311"}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: PBO:0084483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific component of the spindle pole body; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane (PSM) during meiosis II; required for PSM growth and closure; DON1 has a paralog, CUE5, that arose from the whole genome","termid":"PBO:0084483"}


id: PBO:0026995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis_I","termid":"PBO:0026995"}


id: SO:0000777
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non functional descendant of an rRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_transcript","termid":"SO:0000516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:pseudo","type":"exact"},{"name":"pseudogenic rRNA","type":"exact"}],"termid":"SO:0000777"}


id: FYPO:0005637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"normal duration of meiosis I metaphase","type":"related"},{"name":"normal duration of metaphase during meiosis I","type":"related"},{"name":"normal onset of meiosis I metaphase/anaphase transition","type":"exact"},{"name":"normal onset of metaphase/anaphase transition of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0005637"}


id: GO:0034871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydroxy-4,4-dimethylpentan-3-one = 4,4-dimethyl-3-oxopentanal + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-hydroxy-4,4-dimethylpentan-3-one dehydrogenase activity","termid":"GO:0034871"}


id: GO:0035912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the dorsal aorta are generated and organized. The dorsal aorta is a blood vessel in a single-pass circulatory system that carries oxygenated blood from the gills to the rest of the body. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["ZFA:0000014","GOC:bf","UBERON:0005805","GOC:dgh","Wikipedia:Aorta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"dorsal aorta development","termid":"GO:0035907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal aorta morphogenesis","termid":"GO:0035912"}


id: PBO:0039500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 23","termid":"PBO:0039500"}


id: PBO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase (predicted)","termid":"PBO:0001280"}


id: PBO:0047032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 95 member C","termid":"PBO:0047032"}


id: MOD:00026
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-threonine.","definition_xrefs":["ChEBI:30013","DeltaMass:0","PubMed:2989287","PubMed:6692818","RESID:AA0017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine residue","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanoic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"L-threo-threonine","type":"exact"},{"name":"L-threonine","type":"exact"},{"name":"Thr","type":"exact"},{"name":"alpha-amino-beta-hydroxybutyric acid","type":"exact"},{"name":"beta-methylserine","type":"exact"}],"termid":"MOD:00026"}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd","MetaCyc:RXN-11629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"geranylgeraniol kinase activity","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: GO:0102419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: omega-hydroxy-C22:0-CoA + sn-glycerol 3-phosphate = coenzyme A + 2-omega-hydroxy-C22:0-LPA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sn-2-glycerol-3-phosphate omega-OH-C22:0-CoA acyl transferase activity (obsolete GO:0102419)","termid":"GO:0102419"}


id: GO:1901969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"},{"relation_name":"is_a","term_name":"regulation of polynucleotide 3'-phosphatase activity","termid":"GO:1901968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of polynucleotide 3'-phosphatase activity","synonyms":[{"name":"activation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"activation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"activation of DNA 3'-phosphatase activity","type":"exact"},{"name":"activation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"activation of polynucleotide 3'-phosphatase activity","type":"narrow"},{"name":"activation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"positive regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"positive regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"up-regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"up-regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"upregulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"upregulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"upregulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphatase activity","type":"exact"},{"name":"upregulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901969"}


id: PBO:0049392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 6 (putative)","termid":"PBO:0049392"}


id: GO:0050817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fluid solution, or part of it, changes into a solid or semisolid mass.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coagulation","synonyms":[{"name":"clotting","type":"exact"}],"termid":"GO:0050817"}


id: GO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form 3-hydroxytoluene (m-cresol).","definition_xrefs":["MetaCyc:TOLUENE-DEG-3-OH-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via 3-hydroxytoluene","termid":"GO:0019602"}


id: GO:1900669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of endocrocin biosynthetic process","termid":"GO:1900667"},{"relation_name":"positively_regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of endocrocin biosynthetic process","synonyms":[{"name":"activation of endocrocin anabolism","type":"exact"},{"name":"activation of endocrocin biosynthesis","type":"exact"},{"name":"activation of endocrocin biosynthetic process","type":"narrow"},{"name":"activation of endocrocin formation","type":"exact"},{"name":"activation of endocrocin synthesis","type":"exact"},{"name":"positive regulation of endocrocin anabolism","type":"exact"},{"name":"positive regulation of endocrocin biosynthesis","type":"exact"},{"name":"positive regulation of endocrocin formation","type":"exact"},{"name":"positive regulation of endocrocin synthesis","type":"exact"},{"name":"up regulation of endocrocin anabolism","type":"exact"},{"name":"up regulation of endocrocin biosynthesis","type":"exact"},{"name":"up regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up regulation of endocrocin formation","type":"exact"},{"name":"up regulation of endocrocin synthesis","type":"exact"},{"name":"up-regulation of endocrocin anabolism","type":"exact"},{"name":"up-regulation of endocrocin biosynthesis","type":"exact"},{"name":"up-regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up-regulation of endocrocin formation","type":"exact"},{"name":"up-regulation of endocrocin synthesis","type":"exact"},{"name":"upregulation of endocrocin anabolism","type":"exact"},{"name":"upregulation of endocrocin biosynthesis","type":"exact"},{"name":"upregulation of endocrocin biosynthetic process","type":"exact"},{"name":"upregulation of endocrocin formation","type":"exact"},{"name":"upregulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900669"}


id: GO:1905282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:TermGenie","PMID:23069713","GOC:bc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905282"}


id: PBO:0081447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 311","termid":"PBO:0081447"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: MOD:01746
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01746"}


id: PBO:0110386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3123","termid":"PBO:0110386"}


id: PBO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Tgs1","termid":"PBO:0034707"}


id: PBO:0001349
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhp57 facilitates Rhp51 assembly at damage sites independently of Swi5","termid":"PBO:0001349"}


id: PBO:0061812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 2 Y-linked","termid":"PBO:0061812"}


id: GO:0060078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the potential difference across a post-synaptic membrane.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic membrane potential","synonyms":[{"name":"regulation of post-synaptic membrane potential","type":"exact"}],"termid":"GO:0060078"}


id: PBO:0077778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 70","termid":"PBO:0077778"}


id: PBO:0055652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3092","termid":"PBO:0055652"}


id: PBO:0109366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 3B","termid":"PBO:0109366"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: PBO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK1","termid":"PBO:0046172"}


id: FYPO:0001495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable, is elongated, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000032","FYPO:0001985","FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable elongated multinucleate vegetative cell","synonyms":[{"name":"elongated multinucleate viable cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate viable vegetative cell","type":"exact"},{"name":"viable elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001495"}


id: MOD:01180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to 2-hydroxyglycine.","definition_xrefs":["PubMed:17431180","ChEBI:38048","RESID:AA0434","PubMed:16178056","PubMed:17823333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyglycine observational artifact","synonyms":[{"name":"2-hydroxyglycine","type":"exact"},{"name":"2HyGly","type":"exact"},{"name":"alpha-hydroxyglycine","type":"exact"},{"name":"amino(hydroxy)acetic acid","type":"exact"},{"name":"aminohydroxyacetic acid","type":"exact"}],"termid":"MOD:01180"}


id: PBO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 2","termid":"PBO:0080179"}


id: GO:1903776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via single-strand annealing, removal of nonhomologous ends.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25203555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","termid":"GO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"regulation of double-strand break repair via single-strand annealing, removal of nonhomologous ends","termid":"GO:1903776"}


id: PBO:0084523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; may interact with ribosomes; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress","termid":"PBO:0084523"}


id: GO:0045455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecdysteroids, a group of polyhydroxylated ketosteroids ubiquitous in insects and other arthropods, in which they initiate post-embryonic development, including the metamorphosis of immature forms and the development of the reproductive system and the maturation of oocytes in adult females.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ecdysteroid metabolic process","synonyms":[{"name":"ecdysteroid metabolism","type":"exact"}],"termid":"GO:0045455"}


id: PBO:0002294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap104","termid":"PBO:0002294"}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: FYPO:0005860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains a detectable Mei2 nuclear dot complex during the vegetative growth phase of the life cycle. Normally the Mei2 nuclear dot is only present during the meiotic cell cycle.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"Mei2 nuclear dot present in cell during vegetative growth","synonyms":[{"name":"Mei2 nuclear dot present in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005860"}


id: PBO:0076997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 11","termid":"PBO:0076997"}


id: PBO:0091155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4","termid":"PBO:0091155"}


id: GO:0008691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA + NADP+ = 3-acetoacetyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.1.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN","RHEA:16197"],"synonyms":[{"name":"(S)-3-hydroxybutanoyl-CoA:NADP+ oxidoreductase activity","type":"related"},{"name":"BHBD activity","type":"related"},{"name":"L(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"L-(+)-3-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl coenzyme A dehydrogenase activity","type":"related"},{"name":"beta-hydroxybutyryl-CoA dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-3-hydroxybutyryl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0008691"}


id: GO:0090150
data:
  {"annotated_genes":["SJAG_03440","SJAG_03315","SJAG_05300","SJAG_03970","SJAG_03633","SJAG_04294","SJAG_04609","SJAG_01435","SJAG_01782","SJAG_01223","SJAG_02208","SJAG_01917","SJAG_02912","SJAG_00379","SJAG_01496","SJAG_00959","SJAG_00277","SJAG_03930","SJAG_03710","SJAG_01641","SJAG_03838","SJAG_01178","SJAG_04208","SJAG_01114","SJAG_00404","SJAG_02524","SJAG_01299","SJAG_02588","SJAG_01127","SJAG_01112","SJAG_04565","SJAG_02398","SJAG_01999","SJAG_00064","SJAG_02437","SJAG_00144","SJAG_04996","SJAG_05302","SJAG_02914","SJAG_03029","SJAG_01640","SJAG_01120","SJAG_04129","SJAG_02320","SJAG_03955","SJAG_02354","SJAG_00858","SJAG_04684","SJAG_03684","SJAG_02330","SJAG_01949","SJAG_01840","SJAG_00603","SJAG_02177","SJAG_03515","SJAG_00895","SJAG_03865","SJAG_02456","SJAG_01951","SJAG_01349","SJAG_00687","SJAG_02361","SJAG_00569","SJAG_03396","SJAG_00175","SJAG_02034","SJAG_01940","SJAG_04763","SJAG_04203","SJAG_03502","SJAG_01759","SJAG_02231","SJAG_03411","SJAG_01240","SJAG_01809","SJAG_02797","SJAG_01516","SJAG_05414","SJAG_01733","SJAG_01780","SJAG_04451","SJAG_02065","SJAG_04370","SJAG_02355","SJAG_00916","SJAG_03781","SJAG_01558","SJAG_01282","SJAG_03416","SJAG_03756","SJAG_01405","SJAG_00360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[87924,96619,102727,113565,113936,108016,108236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[96501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[74379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"},{"annotations":[104895,108238,102511,104127,101795,76620,90735,102410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[83870],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[83712,70224,74603,91322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[103645,73397,78852,72992,92897,93598,72945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[91011,106652,86132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[107497,101556,94126,105690,98937,109064,86914,93599,103734,90427,110283,103646,87321,99905,100189,109597,104659,93904,96675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[73736,102954,102931,84419,111429,98362,73014,75007,76838,108426,86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[96400,84552,108573,77199,109890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[102885,103016,105688,70260,102932,93773,94115,105698,107050,105349,75755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[74520,75323,91479,71152,60342,72677,74256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[89888,111793,105066,70223,86515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[87283,110316,109574],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[73399,93600,98027,103647,72994,74825],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[83731,72657,109340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in a membrane.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"},{"relation_name":"is_a","term_name":"protein localization to 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of protein localization to membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"establishment of protein localisation in membrane","type":"exact"},{"name":"establishment of protein localization in membrane","type":"exact"}],"termid":"GO:0090150","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0032979":null,"GO:0042997":null,"GO:0043001":null,"GO:0045039":null,"GO:0045040":null,"GO:0045046":null,"GO:0045048":null,"GO:0061951":null,"GO:0071816":null,"GO:0099638":null,"GO:0140569":null,"GO:0140570":null}}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PMID:21561865","PomBase:MAH","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos:(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"rad9/Phos:(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: PBO:0044158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD small phosphatase like","termid":"PBO:0044158"}


id: GO:0006205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine metabolic process (obsolete GO:0006205)","synonyms":[{"name":"pyrimidine metabolic process","type":"exact"}],"termid":"GO:0006205"}


id: PBO:0061690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 205","termid":"PBO:0061690"}


id: PBO:0056627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 8","termid":"PBO:0056627"}


id: PBO:0005481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf30 (predicted)","termid":"PBO:0005481"}


id: PBO:0027363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitosis","termid":"PBO:0027363"}


id: PBO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading/unloading factor (WAPL) Wpl1","termid":"PBO:0034751"}


id: PBO:0014581
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutaric aciduria 2A","termid":"PBO:0014581"}


id: PR:O14127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3C7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.01c","synonyms":[{"name":"Spom972h-sac12","type":"exact"}],"termid":"PR:O14127"}


id: GO:0052905
data:
  {"annotated_genes":["SJAG_04993"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94923],"is_not":false,"summary":null,"term":"GO:0052905"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine9 in tRNA + S-adenosyl-L-methionine = H+ + N1-methylguanosine9 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:43156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140098","GO:0140101","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tRNA (guanosine(9)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6787591","EC:2.1.1.221","MetaCyc:RXN-12459","Reactome:R-HSA-6786621"],"synonyms":[{"name":"tRNA (guanine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanine-N(1)-)-methyltransferase activity","type":"related"},{"name":"tRNA (guanosine(9)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (guanosine(9)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA m(1)G(9) Mtase activity","type":"related"},{"name":"tRNA m(1)G(9)-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))-methyltransferase activity","type":"related"},{"name":"tRNA(m(1)G(9)/m(1)A(9))Mtase activity","type":"related"}],"termid":"GO:0052905","terms_by_termid":{"GO:0052905":null}}


id: PBO:0091585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga9","termid":"PBO:0091585"}


id: PBO:0089607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine/threonine protein phosphatase PP2C catalytic subunit Ptc4","termid":"PBO:0089607"}


id: PBO:0076189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 4","termid":"PBO:0076189"}


id: GO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an autophagosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:26763909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"autophagosome localization","termid":"GO:0061906"}


id: PBO:0034697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces_specific_protein,_uncharacterized","termid":"PBO:0034697"}


id: MOD:00860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing an exogenous sulfur atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur containing modified residue","termid":"MOD:00860"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_00552","SJAG_01556","SJAG_00173","SJAG_00436","SJAG_02341","SJAG_03794","SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100383,113647],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[108841,105622,104953,103351,105056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: PBO:0064792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1K divergent transcript","termid":"PBO:0064792"}


id: PBO:0062966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 9","termid":"PBO:0062966"}


id: PBO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str1","termid":"PBO:0004165"}


id: PATO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern which has irregular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep pattern","termid":"PATO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular sleep pattern","termid":"PATO:0001700"}


id: GO:1905056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration.","definition_xrefs":["PMID:22972962","GO_REF:0000061","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of presynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of presynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905056"}


id: GO:0005663
data:
  {"annotated_genes":["SJAG_04150","SJAG_02182","SJAG_00729","SJAG_00272","SJAG_01010","SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72507,76206,76841,75509,108058,102351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043599"}]},"cv_name":"cellular_component","definition":"A complex that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase. In eukaryotes the complex consists of five polypeptides.","definition_xrefs":["PMID:14614842","PMID:14646196","PMID:16172520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"replication fork","termid":"GO:0005657"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA replication factor C complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"RFC complex","type":"exact"},{"name":"activator 1 complex","type":"exact"}],"termid":"GO:0005663","terms_by_termid":{"GO:0043599":null}}


id: GO:0018490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (4-hydroxyphenyl)pyruvate + O2 = 2 (4-hydroxyphenyl)acetate + 2 CO2.","definition_xrefs":["RHEA:17197","EC:1.2.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","termid":"GO:0016623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxyphenylpyruvate oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0299","KEGG_REACTION:R00042","MetaCyc:1.2.3.13-RXN"],"synonyms":[{"name":"4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)","type":"broad"}],"termid":"GO:0018490"}


id: PBO:0045518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death domain containing 1","termid":"PBO:0045518"}


id: PBO:0047779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD1 antisense RNA 1","termid":"PBO:0047779"}


id: FYPO:0004294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has a septum in an abnormal location when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized septum in stationary phase","synonyms":[{"name":"abnormal septum localization in stationary phase","type":"related"},{"name":"abnormal septum location in stationary phase","type":"exact"},{"name":"abnormal septum position in stationary phase","type":"exact"},{"name":"abnormal septum positioning in stationary phase","type":"related"},{"name":"asymmetric septum in stationary phase","type":"exact"},{"name":"asymmetrically located septum in stationary phase","type":"exact"},{"name":"mislocalised septum in stationary phase","type":"exact"},{"name":"misplaced septum in stationary phase","type":"exact"}],"termid":"FYPO:0004294"}


id: GO:0046441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-lysine metabolic process","synonyms":[{"name":"D-lysine metabolism","type":"exact"}],"termid":"GO:0046441"}


id: GO:0008245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lysosomal membrane hydrogen-transporting ATPase (obsolete GO:0008245)","synonyms":[{"name":"V-ATPase","type":"related"},{"name":"lysosomal membrane hydrogen-transporting ATPase","type":"exact"}],"termid":"GO:0008245"}


id: GO:0030238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of male sex of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male sex determination","termid":"GO:0030238"}


id: SO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four or five consecutive residues and one H-bond in which: residue(i) is Serine (S) or Threonine (T), the side-chain OH of residue(i) is H-bonded to the main-chain CO of residue(i3) or (i4), Phi angles of residues(i1), (i2) and (i3) are negative.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_staple_motif","secondary_identifiers":["BS:00230"],"synonyms":[{"name":"serine threonine staple motif","type":"exact"},{"name":"st_staple","type":"exact"}],"termid":"SO:0001127"}


id: PBO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNRHR2 pseudogene 1","termid":"PBO:0048852"}


id: GO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the kinetochore microtubules shorten as chromosomes move toward the spindle poles as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000090"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0000090","GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic anaphase A","termid":"GO:0000091"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:mah","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: PBO:0004858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTT109 family histone lysine acetyltransferase","termid":"PBO:0004858"}


id: FYPO:0005136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break formation","termid":"FYPO:0005136"}


id: PBO:0015252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0015252"}


id: FYPO:0006348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mechlorethamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on mechlorethamine","synonyms":[{"name":"normal cell population growth in presence of mechlorethamine","type":"exact"},{"name":"normal cell population growth on mechlorethamine","type":"exact"},{"name":"normal growth on 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"normal growth on HN2","type":"exact"},{"name":"normal growth on bis(2-chloroethyl)methylamine","type":"exact"},{"name":"normal vegetative cell population growth on mechlorethamine","type":"exact"}],"termid":"FYPO:0006348"}


id: GO:0048669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons.","definition_xrefs":["GOC:lm","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting in absence of injury","termid":"GO:0048669"}


id: PBO:0056334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K14 antisense RNA 1","termid":"PBO:0056334"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: PATO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edematous","termid":"PATO:0001450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalic","termid":"PATO:0001853"}


id: FYPO:0004568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle","termid":"FYPO:0004568"}


id: PBO:0075681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequestosome 1","termid":"PBO:0075681"}


id: GO:0035382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a sterol is transported across a membrane. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sterol transmembrane transport","synonyms":[{"name":"sterol membrane transport","type":"exact"}],"termid":"GO:0035382"}


id: PBO:0054932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2346","termid":"PBO:0054932"}


id: PBO:0085470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydrogenase involved in tyrosine biosynthesis; expression is dependent on phenylalanine levels","termid":"PBO:0085470"}


id: GO:0102476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinocembrin + NADPH + O2 + H+ = 2,5,7-trihydroxyflavanone + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pinocembrin 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14083","RHEA:57592"],"termid":"GO:0102476"}


id: PBO:0070502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 1","termid":"PBO:0070502"}


id: GO:0001631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cysteinyl leukotriene to initiate a change in cell activity. Cysteinyl leukotrienes are leukotrienes that contain a peptide group based on cysteine.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cysteinyl leukotriene receptor activity","synonyms":[{"name":"CysLT receptor","type":"exact"}],"termid":"GO:0001631"}


id: PBO:0058448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5087","termid":"PBO:0058448"}


id: GO:0044654
data:
  {"annotated_genes":["SJAG_02131","SJAG_03824"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97085,97086],"is_not":false,"summary":null,"term":"GO:0044654"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: starch + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"starch alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044654","terms_by_termid":{"GO:0044654":null}}


id: GO:0102701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate(3-) = tricyclene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tricyclene synthase activity","secondary_identifiers":["MetaCyc:RXN-5121","RHEA:32687"],"termid":"GO:0102701"}


id: GO:0010964
data:
  {"annotated_genes":["SJAG_04369","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112853],"is_not":false,"summary":null,"term":"GO:0010964"},{"annotations":[103826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small non-coding RNA-mediated heterochromatin formation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"regulates","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNAi-mediated heterochromatin assembly","type":"exact"},{"name":"regulation of chromatin silencing by small RNA","type":"narrow"},{"name":"regulation of heterochromatin assembly by small RNA","type":"narrow"},{"name":"regulation of ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"regulation of small non-coding RNA-mediated heterochromatin formation","type":"narrow"}],"termid":"GO:0010964","terms_by_termid":{"GO:0010964":null,"GO:0060906":null}}


id: PR:Q9URZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mel1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase mel1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.07c","synonyms":[{"name":"Melibiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mel1","type":"exact"},{"name":"alpha-D-galactoside galactohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ0"}


id: PBO:0066769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 67","termid":"PBO:0066769"}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: GO:0099077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA-binding activity that is dependent on binding to a histone.","definition_xrefs":["PMID:11691835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"histone-dependent DNA binding","termid":"GO:0099077"}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["EC:5.1.1.7","RHEA:15393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["MetaCyc:DIAMINOPIMEPIM-RXN","KEGG_REACTION:R02735"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: FYECO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with isoleucine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, isoleucine nitrogen source","termid":"FYECO:0000278"}


id: PBO:0040561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2","termid":"PBO:0040561"}


id: PBO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SMARCD1, SMARCD2 and SMARCD3 ortholog","termid":"PBO:0033813"}


id: PBO:0062666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily H member 1","termid":"PBO:0062666"}


id: PBO:0053164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor adaptor protein 1","termid":"PBO:0053164"}


id: PBO:0078707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-2","termid":"PBO:0078707"}


id: PBO:0108608
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_detail","termid":"PBO:0108608"}


id: PBO:0079520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase like (pseudogene)","termid":"PBO:0079520"}


id: FYPO:0007150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of microtubule bundle formation, which normally results in a parallel arrangement of microtubules, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"decreased microtubule bundle formation","synonyms":[{"name":"decreased microtubule array formation","type":"related"},{"name":"decreased microtubule bundling","type":"exact"},{"name":"reduced microtubule bundle formation","type":"exact"}],"termid":"FYPO:0007150"}


id: GO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V2 vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"V2 vasopressin receptor binding","synonyms":[{"name":"V2 vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031896"}


id: GO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of poly(3-hydroxyalkanoates), polyesters of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"poly(3-hydroxyalkanoate) biosynthetic process","termid":"GO:0042621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(3-hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"regulation of PHA","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) anabolism","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) formation","type":"exact"},{"name":"regulation of poly(3-hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:0043286"}


id: PBO:0030042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_vegetative_growth","termid":"PBO:0030042"}


id: GO:0034708
data:
  {"annotated_genes":["SJAG_03431","SJAG_01540","SJAG_03680","SJAG_00769","SJAG_02768","SJAG_00896","SJAG_00341","SJAG_03949","SJAG_07011","SJAG_04680","SJAG_02637","SJAG_01325","SJAG_04848","SJAG_00756","SJAG_02119","SJAG_02329","SJAG_02386","SJAG_04181","SJAG_04574","SJAG_02170","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89955,92291,112792,113861,105768,109207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[77639,91788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035657"},{"annotations":[112648,86407,104667,101015,98549,110859,71436,75078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048188"},{"annotations":[74488,73570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[91790,99569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[110868,114032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses methyltransferase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_00769":null,"SJAG_00896":null,"SJAG_01325":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_02170":null,"SJAG_02329":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_02768":null,"SJAG_03431":null,"SJAG_03680":null,"SJAG_03949":null,"SJAG_04181":null,"SJAG_04574":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0034708","terms_by_termid":{"GO:0031515":null,"GO:0035657":null,"GO:0043494":null,"GO:0043528":null,"GO:0048188":null,"GO:0106143":null}}


id: PR:000050517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PRO:DAN","PMID:22375066","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/Phos:(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"Spom-ssp2/Phos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, MOD:00047","type":"narrow"},{"name":"ssp2/Phos:(T189)","type":"exact"}],"termid":"PR:000050517"}


id: PBO:0082606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cochaperone protein; regulates activity of adenylyl cyclase Cyr1p; involved in kinetochore complex assembly; associates with the SCF (Skp1p/Cdc53p/F box protein) ubiquitin ligase complex; acts as a linker between Skp1p and HSP90 complexes; protein abundance increases in response to DNA replication stress","termid":"PBO:0082606"}


id: PBO:0004367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 1 Pre3 (predicted)","termid":"PBO:0004367"}


id: PBO:0039246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member L1","termid":"PBO:0039246"}


id: PBO:0081702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 623","termid":"PBO:0081702"}


id: FYPO:0004161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to regions of chromatin containing genes that can be transcribed by RNA polymerase II is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at polymerase II transcribed genes during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","type":"exact"}],"termid":"FYPO:0004161"}


id: PBO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Erf2 (predicted)","termid":"PBO:0003802"}


id: PBO:0091356
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Target Of Sbf, after S. cerevisiae","termid":"PBO:0091356"}


id: GO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemoglobin biosynthetic process","synonyms":[{"name":"down regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"down-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"downregulation of hemoglobin biosynthetic process","type":"exact"},{"name":"inhibition of hemoglobin biosynthetic process","type":"narrow"},{"name":"negative regulation of haemoglobin biosynthesis","type":"exact"},{"name":"negative regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"negative regulation of hemoglobin anabolism","type":"exact"},{"name":"negative regulation of hemoglobin biosynthesis","type":"exact"},{"name":"negative regulation of hemoglobin formation","type":"exact"},{"name":"negative regulation of hemoglobin synthesis","type":"exact"}],"termid":"GO:0046986"}


id: PBO:0076676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1 pseudogene 1","termid":"PBO:0076676"}


id: GO:1900575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"emodin metabolic process","termid":"GO:1900573"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"emodin biosynthetic process","synonyms":[{"name":"emodin anabolism","type":"exact"},{"name":"emodin biosynthesis","type":"exact"},{"name":"emodin formation","type":"exact"},{"name":"emodin synthesis","type":"exact"}],"termid":"GO:1900575"}


id: GO:0072371
data:
  {"annotated_genes":["SJAG_00364","SJAG_03720","SJAG_01082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102002,109712,111403],"is_not":false,"summary":null,"term":"GO:0072371"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-serine (position 121) + ATP = histone H2A-phosphoserine (position 121) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 121 of histone H2A.","definition_xrefs":["PMID:19965387","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01082":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0140096","GO:0003674","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"histone H2AS121 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A-S121 kinase activity","type":"exact"},{"name":"histone kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone serine kinase activity (H2A-S121 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2A-S121 specific)","type":"exact"}],"termid":"GO:0072371","terms_by_termid":{"GO:0072371":null}}


id: GO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of taste","synonyms":[{"name":"perception of taste, detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory detection of taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory transduction of taste","type":"exact"},{"name":"taste perception","type":"broad"}],"termid":"GO:0050912"}


id: PBO:0054059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1402","termid":"PBO:0054059"}


id: MOD:00366
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-sulfo-L-serine.","definition_xrefs":["PubMed:14752058","Unimod:40#S","RESID:AA0361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sulfo-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(sulfooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-sulfate","type":"exact"},{"name":"MOD_RES Sulfoserine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O-sulfo-L-serine","type":"exact"},{"name":"O3-sulfonoserine","type":"exact"},{"name":"O3-sulfoserine","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"serine sulfate ester","type":"exact"}],"termid":"MOD:00366"}


id: GO:1990252
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contributes to the endocytic process and bud growth in yeast. It is involved in the precise timing of actin assembly during endocytosis.","definition_xrefs":["GOC:bhm","PMID:19713939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Syp1 complex","synonyms":[{"name":"Syp1 dimer","type":"exact"}],"termid":"GO:1990252"}


id: PBO:0042888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 410","termid":"PBO:0042888"}


id: PBO:0056659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 26","termid":"PBO:0056659"}


id: GO:0033081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell differentiation in thymus","synonyms":[{"name":"regulation of T cell development in thymus","type":"related"},{"name":"regulation of thymic T cell differentiation","type":"exact"},{"name":"regulation of thymocyte cell differentiation","type":"exact"},{"name":"regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033081"}


id: GO:0048066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the deposition of coloring matter in an organism, tissue or cell.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental pigmentation","synonyms":[{"name":"pigmentation during development","type":"related"}],"termid":"GO:0048066"}


id: PBO:0063479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDLIM1 interacting kinase 1 like","termid":"PBO:0063479"}


id: GO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"maturation of 2S rRNA","termid":"GO:0000475"}


id: RO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_ubiquitination","termid":"RO:0002482"}


id: PBO:0084673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial and cytoplasmic valyl-tRNA synthetase; human homolog VARS2 implicated in mitochondrial diseases, can partially complement yeast null mutant","termid":"PBO:0084673"}


id: PBO:0044421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 5","termid":"PBO:0044421"}


id: PBO:0057163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320b-1","termid":"PBO:0057163"}


id: PBO:0004364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc21","termid":"PBO:0004364"}


id: PBO:0077703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C2, fast skeletal type","termid":"PBO:0077703"}


id: PBO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cip1","termid":"PBO:0004880"}


id: PBO:0077422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161A","termid":"PBO:0077422"}


id: GO:0102073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: OPC8-3-hydroxyacyl-CoA = OPC8-trans-2-enoyl-CoA + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.17"],"gene_count":0,"genotype_count":0,"name":"obsolete OPC8-trans-2-enoyl-CoA hydratase activity (obsolete GO:0102073)","termid":"GO:0102073"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: GO:1901544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"positively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"activation of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"positive regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901544"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"NAD+ ADP-ribosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2187325","Reactome:R-HSA-9686061","Reactome:R-HSA-5688276","Reactome:R-HSA-3640858","Reactome:R-HSA-8948800","MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-5687653","Reactome:R-HSA-9729279","Reactome:R-HSA-5651723","Reactome:R-HSA-8938073"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: MOD:00758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)glucosyl-L-hydroxyproline.","definition_xrefs":["PubMed:15238247","PubMed:9660787","RESID:AA0390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","termid":"MOD:01677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-glucopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylglucosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-glucopyranosyl]oxyproline","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) hydroxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"O4GlcNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)glucopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00758"}


id: GO:0030975
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95031],"is_not":false,"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thiamine binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin binding","type":"exact"},{"name":"vitamin B1 binding","type":"exact"}],"termid":"GO:0030975","terms_by_termid":{"GO:0030975":null}}


id: PBO:0051787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F5","termid":"PBO:0051787"}


id: PBO:0034720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (ERCC-3) subunit Ptr8","termid":"PBO:0034720"}


id: GO:0071809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin biosynthetic process","termid":"GO:0100008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin biosynthesis","termid":"GO:0071809"}


id: PBO:0031364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0031364"}


id: PBO:0053554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 561","termid":"PBO:0053554"}


id: GO:0106410
data:
  {"annotated_genes":["SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97627],"is_not":false,"summary":null,"term":"GO:0106410"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of a box C/D RNA molecule.","definition_xrefs":["PMID:34352089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"},{"relation_name":"is_a","term_name":"box C/D RNA processing","termid":"GO:0034963"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"box C/D RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106410","terms_by_termid":{"GO:0106410":null}}


id: GO:0102627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: parthenolide + NADPH + O2 + H+ = 3beta-hydroxyparthenolide + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"parthenolide 3beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15532"],"termid":"GO:0102627"}


id: PR:P48009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.11c","secondary_identifiers":["UniProtKB:P48009"],"synonyms":[{"name":"SPAC9G1.11c","type":"related"},{"name":"Spom972h-SEPT4","type":"exact"}],"termid":"PR:P48009"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.160","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity","secondary_identifiers":["RHEA:20944","MetaCyc:RXN-7599"],"termid":"GO:0102740"}


id: PBO:0030627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_nitrogen_starvation","termid":"PBO:0030627"}


id: GO:0032286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature central nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"central nervous system myelin maintenance","synonyms":[{"name":"central nervous system myelin sheath maintenance","type":"exact"},{"name":"myelin maintenance in central nervous system","type":"exact"}],"termid":"GO:0032286"}


id: PBO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Puc1","termid":"PBO:0004621"}


id: PBO:0066722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 19","termid":"PBO:0066722"}


id: PBO:0108940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 19","termid":"PBO:0108940"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016787","GO:0003674","GO:0016829","GO:0016788"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: PBO:0031128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_ammonia_nitrogen_source","termid":"PBO:0031128"}


id: GO:0008998
data:
  {"annotated_genes":["SJAG_02948"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71881],"is_not":false,"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside triphosphate + thioredoxin disulfide + H2O = ribonucleoside triphosphate + thioredoxin.","definition_xrefs":["EC:1.17.4.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:1.17.4.2-RXN","RHEA:12701"],"synonyms":[{"name":"2'-deoxyribonucleoside-triphosphate:oxidized-thioredoxin 2'-oxidoreductase activity","type":"related"},{"name":"2'-deoxyribonucleoside-triphosphate:thioredoxin-disulfide 2'-oxidoreductase activity","type":"related"},{"name":"ribonucleotide reductase activity","type":"broad"}],"termid":"GO:0008998","terms_by_termid":{"GO:0008998":null}}


id: GO:1990351
data:
  {"annotated_genes":["SJAG_04677","SJAG_03050","SJAG_04675","SJAG_02524","SJAG_07006","SJAG_04208","SJAG_00687","SJAG_01731","SJAG_02516","SJAG_01763","SJAG_02693","SJAG_02646","SJAG_00080","SJAG_05229","SJAG_00755","SJAG_MIT03","SJAG_05315","SJAG_00601","SJAG_01949","SJAG_03324","SJAG_00891","SJAG_01490","SJAG_03490","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76861,88083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[86102,84418,88422,111428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042719"},{"annotations":[74963,113236,114097,103310,99512,108623,110284,112785,85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005750"},{"annotations":[70937,92518,74828,92039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990429"},{"annotations":[97793,93476,90031,100470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990531"},{"annotations":[73883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex facilitating transport of molecules (proteins, small molecules, nucleic acids) into, out of or within a cell, or between cells.","definition_xrefs":["GOC:bhm","PMID:15449578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00687":null,"SJAG_00755":null,"SJAG_00891":null,"SJAG_01490":null,"SJAG_01731":null,"SJAG_01763":null,"SJAG_01949":null,"SJAG_02516":null,"SJAG_02524":null,"SJAG_02646":null,"SJAG_02693":null,"SJAG_02897":null,"SJAG_03050":null,"SJAG_03324":null,"SJAG_03490":null,"SJAG_04208":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05229":null,"SJAG_05315":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transporter complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1990351","terms_by_termid":{"GO:0005750":null,"GO:0005891":null,"GO:0033573":null,"GO:0042719":null,"GO:1990429":null,"GO:1990531":null}}


id: PBO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.16","termid":"PBO:0004067"}


id: GO:0106426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tge kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"regulates","term_name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}


id: PBO:0081638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 566","termid":"PBO:0081638"}


id: PR:Q9C0Z9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase III subunit RPC9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01381","PRO:DNx","PANTHER:PTHR15561:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.10","secondary_identifiers":["UniProtKB:Q9C0Z9"],"synonyms":[{"name":"RNA polymerase III subunit C17 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CRCP","type":"exact"}],"termid":"PR:Q9C0Z9"}


id: PBO:0047708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin like 2","termid":"PBO:0047708"}


id: GO:0075319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"positively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ascus development","termid":"GO:0075319"}


id: PBO:0067986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 288","termid":"PBO:0067986"}


id: PBO:0079228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 5","termid":"PBO:0079228"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: PBO:0076902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 56, pseudogene","termid":"PBO:0076902"}


id: FYPO:0002447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the N-glycosylation of one or more specific proteins, or of specific protein sites, is abnormal. Protein N-linked glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein via the N4 atom of peptidyl-asparagine, the omega-N of arginine, or the N1' atom peptidyl-tryptophan.","definition_xrefs":["PomBase:mah","GO:0006487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein N-linked glycosylation during vegetative growth","synonyms":[{"name":"abnormal protein N-glycosylation during vegetative growth","type":"exact"},{"name":"abnormal protein N-linked glycosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002447"}


id: PBO:0085643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in localization of Cdc24p to the site of bud growth; may act as a membrane anchor; localizes to the bud neck and bud tip; potentially phosphorylated by Cdc28p; TOS2 has a paralog, SKG6, that arose from the whole genome duplication","termid":"PBO:0085643"}


id: PBO:0002556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein (predicted)","termid":"PBO:0002556"}


id: PBO:0030435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methyltransferase_activity","termid":"PBO:0030435"}


id: PBO:0086784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086784"}


id: PBO:0086291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in endocytosis and vacuole integrity; peripheral membrane protein; interacts with and negatively regulates Arl1p; localizes to the endosome; member of the Sec7p family of proteins","termid":"PBO:0086291"}


id: PBO:0050878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 1","termid":"PBO:0050878"}


id: FYPO:0002691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing menadione.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on menadione","synonyms":[{"name":"normal cell population growth in presence of menadione","type":"exact"},{"name":"normal cell population growth on menadione","type":"exact"},{"name":"normal cellular response to menadione","type":"related"},{"name":"normal vegetative cell population growth on menadione","type":"exact"}],"termid":"FYPO:0002691"}


id: GO:0030894
data:
  {"annotated_genes":["SJAG_03722","SJAG_04150","SJAG_00863","SJAG_05239","SJAG_00729","SJAG_03855","SJAG_02627","SJAG_04994","SJAG_02172","SJAG_00814","SJAG_02818","SJAG_03780","SJAG_00272","SJAG_05197","SJAG_01698","SJAG_02182","SJAG_01010","SJAG_04877"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72698,70619,92975,74654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[98269,71094,76000,74592],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[106805,111411,110680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[72507,75509,76841,108058,76206,102351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[107751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043601"}]},"cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the replication fork which mediates DNA replication. Includes DNA primase, one or more DNA polymerases, DNA helicases, and other proteins.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"part_of","term_name":"replication fork","termid":"GO:0005657"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01698":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_04150":null,"SJAG_04877":null,"SJAG_04994":null,"SJAG_05197":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"replisome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Replisome"],"synonyms":[{"name":"DNA synthesome complex","type":"related"},{"name":"RC complex","type":"related"},{"name":"replication-competent complex","type":"related"}],"termid":"GO:0030894","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PBO:0042040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 92","termid":"PBO:0042040"}


id: GO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: PBO:0049604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 7","termid":"PBO:0049604"}


id: PBO:0044576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diazepam binding inhibitor, acyl-CoA binding protein","termid":"PBO:0044576"}


id: GO:0006942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"regulates","term_name":"striated muscle contraction","termid":"GO:0006941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle contraction","termid":"GO:0006942"}


id: PBO:0003126
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.-","termid":"PBO:0003126"}


id: GO:0046824
data:
  {"annotated_genes":["SJAG_02592","SJAG_04464","SJAG_01805","SJAG_03048","SJAG_03453","SJAG_01245","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106282,89430,97319,95927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[89982,97842,86536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of nucleocytoplasmic transport","termid":"GO:0046822"},{"relation_name":"positively_regulates","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nucleocytoplasmic transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nucleocytoplasmic transport","type":"narrow"},{"name":"stimulation of nucleocytoplasmic transport","type":"narrow"},{"name":"up regulation of nucleocytoplasmic transport","type":"exact"},{"name":"up-regulation of nucleocytoplasmic transport","type":"exact"},{"name":"upregulation of nucleocytoplasmic transport","type":"exact"}],"termid":"GO:0046824","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["RHEA:16429","EC:6.3.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["KEGG_REACTION:R02783","MetaCyc:UDP-NACMURALA-GLU-LIG-RXN"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: GO:0006611
data:
  {"annotated_genes":["SJAG_04472","SJAG_01358","SJAG_03836","SJAG_01805","SJAG_01245","SJAG_04464","SJAG_04366","SJAG_04312","SJAG_04400","SJAG_00753","SJAG_01534","SJAG_00375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71642,86759,88788,92075,96639,104904,112505,112778],"is_not":false,"summary":null,"term":"GO:0006611"},{"annotations":[97319,89430,95927,106282],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046827"}]},"cv_name":"biological_process","definition":"The directed movement of a protein from the nucleus into the cytoplasm.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00375":null,"SJAG_00753":null,"SJAG_01245":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01805":null,"SJAG_03836":null,"SJAG_04312":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04464":null,"SJAG_04472":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"protein export from nucleus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0097349"],"synonyms":[{"name":"copper-induced protein export from nucleus","type":"related"},{"name":"protein export from cell nucleus","type":"exact"},{"name":"protein export out of nucleus","type":"exact"},{"name":"protein transport from nucleus to cytoplasm","type":"exact"},{"name":"protein-nucleus export","type":"exact"}],"termid":"GO:0006611","terms_by_termid":{"GO:0006611":null,"GO:0046827":null}}


id: GO:1905128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axo-dendritic protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:20694152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of axo-dendritic protein transport","termid":"GO:1905126"},{"relation_name":"positively_regulates","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of axo-dendritic protein transport","synonyms":[{"name":"activation of axo-dendritic protein transport","type":"narrow"},{"name":"activation of axonal protein transport","type":"narrow"},{"name":"positive regulation of axonal protein transport","type":"narrow"},{"name":"up regulation of axo-dendritic protein transport","type":"exact"},{"name":"up regulation of axonal protein transport","type":"narrow"},{"name":"up-regulation of axo-dendritic protein transport","type":"exact"},{"name":"up-regulation of axonal protein transport","type":"narrow"},{"name":"upregulation of axo-dendritic protein transport","type":"exact"},{"name":"upregulation of axonal protein transport","type":"narrow"}],"termid":"GO:1905128"}


id: PBO:0054881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2295","termid":"PBO:0054881"}


id: GO:2001049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tendon cell differentiation","synonyms":[{"name":"regulation of muscle attachment cell differentiation","type":"exact"},{"name":"regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001049"}


id: FYPO:0006947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during glucose starvation","synonyms":[{"name":"ectopic protein localization to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalised to cytoplasm during glucose starvation","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose depletion","type":"exact"},{"name":"protein mislocalized to cytoplasm during glucose deprivation","type":"exact"}],"termid":"FYPO:0006947"}


id: PBO:0065564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 4","termid":"PBO:0065564"}


id: PBO:0041843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 23","termid":"PBO:0041843"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: GO:1901166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in autonomic nervous system development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"}


id: GO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid glucose ester + UDP.","definition_xrefs":["RHEA:62316","MetaCyc:RXN-11659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (ester-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (ester-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052639"}


id: PR:Q10271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb2 gene.","definition_xrefs":["UniProtKB:Q10271","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.07","synonyms":[{"name":"Spom972h-arb2","type":"exact"}],"termid":"PR:Q10271"}


id: GO:0060387
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure that lies outside the plasma membrane and surrounds the egg. The fertilization envelope forms from the vitelline membrane after fertilization as a result of cortical granule release.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"egg coat","termid":"GO:0035805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fertilization envelope","synonyms":[{"name":"fertilization membrane","type":"related"}],"termid":"GO:0060387"}


id: GO:0070917
data:
  {"annotated_genes":["SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75441],"is_not":false,"summary":null,"term":"GO:0070917"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of inositol phosphoceramide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"inositol phosphoceramide synthase regulator activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"IPC synthase regulator activity","type":"exact"}],"termid":"GO:0070917","terms_by_termid":{"GO:0070917":null}}


id: PBO:0058220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4510","termid":"PBO:0058220"}


id: PBO:0054421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1817","termid":"PBO:0054421"}


id: PBO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A1","termid":"PBO:0048854"}


id: PBO:0069384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 644, pseudogene","termid":"PBO:0069384"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: SO:0001495
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A centromere DNA Element I (CDEI) is a conserved region, part of the centromere, consisting of a consensus region that consists of a 25-bp which enables binding by the centromere DNA binding factor 3 (CBF3) complex.","definition_xrefs":["PMID:11222754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"point_centromere","termid":"SO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere_DNA_Element_III","synonyms":[{"name":"CDEIII","type":"exact"},{"name":"centromere DNA Element III","type":"exact"}],"termid":"SO:0001495"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: GO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.","definition_xrefs":["GOC:dgh","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ensheathment of neurons","synonyms":[{"name":"ionic insulation of neurons by glial cells","type":"related"}],"termid":"GO:0007272"}


id: PBO:0066005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator","termid":"PBO:0066005"}


id: SO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where a segment of DNA has been rearranged from what it was in the parent cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_rearrangement_feature","synonyms":[{"name":"sequence rearrangement feature","type":"exact"}],"termid":"SO:0000669"}


id: GO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or extent of heart growth. Heart growth is the increase in size or mass of the heart.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organ growth","termid":"GO:0046622"},{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"positively_regulates","term_name":"heart growth","termid":"GO:0060419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart growth","termid":"GO:0060421"}


id: PBO:0082018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated B","termid":"PBO:0082018"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: GO:0003872
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76810],"is_not":false,"summary":null,"term":"GO:0003872"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"6-phosphofructokinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:6PFRUCTPHOS-RXN","Reactome:R-HSA-70467","RHEA:16109"],"synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"},{"name":"6-phosphofructose 1-kinase activity","type":"related"},{"name":"ATP-dependent phosphofructokinase activity","type":"related"},{"name":"ATP:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"PFK","type":"related"},{"name":"fructose 6-phosphate kinase activity","type":"related"},{"name":"fructose 6-phosphokinase activity","type":"related"},{"name":"nucleotide triphosphate-dependent phosphofructokinase activity","type":"related"},{"name":"phospho-1,6-fructokinase activity","type":"related"},{"name":"phosphofructokinase (phosphorylating)","type":"related"},{"name":"phosphofructokinase I activity","type":"related"},{"name":"phosphohexokinase activity","type":"broad"}],"termid":"GO:0003872","terms_by_termid":{"GO:0003872":null}}


id: PBO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds STREP motif","termid":"PBO:0000899"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a lysine residue from the N-terminal of an oligopeptide or polypeptide chain.","definition_xrefs":["PMID:12799365","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal lysine aminopeptidase activity (obsolete GO:0051398)","synonyms":[{"name":"N-terminal lysine aminopeptidase activity","type":"exact"},{"name":"lysine aminopeptidase activity","type":"broad"},{"name":"lysyl aminopeptidase activity","type":"broad"}],"termid":"GO:0051398"}


id: GO:1904767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to octanoic acid.","definition_xrefs":["GOC:kmv","PMID:19828452","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"octanoic acid binding","synonyms":[{"name":"caprylic acid binding","type":"exact"}],"termid":"GO:1904767"}


id: FYPO:0001674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"abnormal alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001674"}


id: GO:1902982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA strand elongation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0007049","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in premeiotic DNA replication","synonyms":[{"name":"DNA strand elongation involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902982"}


id: PBO:0069453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 718, pseudogene","termid":"PBO:0069453"}


id: PBO:0089277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatB N-acetyltransferase complex catalytic subunit Naa20","termid":"PBO:0089277"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: PBO:0062946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 4","termid":"PBO:0062946"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: PBO:0087328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting factor, central regulator of spatial protein quality control; physically and functionally interacts with chaperones to promote sorting and deposition of misfolded proteins into cytosolic compartments; involved in destabilization of [URE3] prions; CUR1 has a paralog, BTN2, that arose from the whole genome duplication","termid":"PBO:0087328"}


id: GO:0071040
data:
  {"annotated_genes":["SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70876],"is_not":false,"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of an antisense transcript, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target antisense transcript.","definition_xrefs":["PMID:18022365","GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA transcript catabolic process","termid":"GO:0071041"},{"relation_name":"is_a","term_name":"nuclear polyadenylation-dependent ncRNA catabolic process","termid":"GO:0071046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent antisense transcript catabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"nuclear poly(A)-dependent antisense transcript catabolic process","type":"related"}],"termid":"GO:0071040","terms_by_termid":{"GO:0071040":null}}


id: GO:0035816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process where water is taken up from the collecting ducts and proximal and distal loops of the nephron, which acts to decrease the amount of urine that is excreted from the body per unit time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"gene_count":0,"genotype_count":0,"name":"obsolete renal water absorption involved in negative regulation of urine volume (obsolete GO:0035816)","termid":"GO:0035816"}


id: GO:1901884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 4-hydroxycoumarin.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"4-hydroxycoumarin metabolic process","termid":"GO:1901882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"4-hydroxycoumarin biosynthetic process","synonyms":[{"name":"4-hydroxycoumarin anabolism","type":"exact"},{"name":"4-hydroxycoumarin biosynthesis","type":"exact"},{"name":"4-hydroxycoumarin formation","type":"exact"},{"name":"4-hydroxycoumarin synthesis","type":"exact"}],"termid":"GO:1901884"}


id: PR:O94332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn11 gene.","definition_xrefs":["UniProtKB:O94332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.17c","synonyms":[{"name":"Spom972h-rrn11","type":"exact"}],"termid":"PR:O94332"}


id: PBO:0086596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression induced in cells treated with mycotoxins patulin or citrinin; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086596"}


id: GO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of gelatin; little activity on hemoglobin. Specificity on B chain of insulin more restricted than pepsin A; does not cleave Phe1-Val2, Gln4-His5 or Gly23-Phe24.","definition_xrefs":["EC:3.4.23.25"],"gene_count":0,"genotype_count":0,"name":"obsolete saccharopepsin activity (obsolete GO:0004196)","synonyms":[{"name":"PRA","type":"related"},{"name":"Saccharomyces aspartic proteinase activity","type":"narrow"},{"name":"aspartic proteinase yscA","type":"related"},{"name":"proteinase A","type":"related"},{"name":"proteinase yscA","type":"related"},{"name":"saccharomyces aspartic proteinase activity","type":"related"},{"name":"saccharomyces cerevisiae aspartic proteinase A","type":"related"},{"name":"saccharopepsin activity","type":"exact"},{"name":"yeast endopeptidase A activity","type":"narrow"},{"name":"yeast proteinase A","type":"related"}],"termid":"GO:0004196"}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PMID:33723569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: GO:1903628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:1315924","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dUTP diphosphatase activity (obsolete GO:1903628)","synonyms":[{"name":"down regulation of dUTP diphosphatase activity","type":"exact"},{"name":"down regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"down regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"down regulation of dUTPase activity","type":"exact"},{"name":"down regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"down regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"down regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"down-regulation of dUTP diphosphatase activity","type":"exact"},{"name":"down-regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"down-regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"down-regulation of dUTPase activity","type":"exact"},{"name":"down-regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"down-regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"down-regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"downregulation of dUTP diphosphatase activity","type":"exact"},{"name":"downregulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"downregulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"downregulation of dUTPase activity","type":"exact"},{"name":"downregulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"downregulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"downregulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"inhibition of dUTP diphosphatase activity","type":"narrow"},{"name":"inhibition of dUTP nucleotidohydrolase activity","type":"narrow"},{"name":"inhibition of dUTP pyrophosphatase activity","type":"narrow"},{"name":"inhibition of dUTPase activity","type":"narrow"},{"name":"inhibition of deoxyuridine-triphosphatase activity","type":"narrow"},{"name":"inhibition of desoxyuridine 5'-triphosphatase activity","type":"narrow"},{"name":"inhibition of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"narrow"},{"name":"negative regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"negative regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"negative regulation of dUTPase activity","type":"exact"},{"name":"negative regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"negative regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"negative regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903628"}


id: GO:0007472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the wing disc are generated and organized. This includes the transformation of a wing imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc morphogenesis","synonyms":[{"name":"wing disc metamorphosis","type":"exact"}],"termid":"GO:0007472"}


id: PBO:0030371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030371"}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["GO:0020022","PMID:26523947","PMID:25964650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: PBO:0011440
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae OXA1","termid":"PBO:0011440"}


id: PBO:0077275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14C","termid":"PBO:0077275"}


id: SO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_methylation_site","synonyms":[{"name":"H3K36 methylation site","type":"exact"}],"termid":"SO:0001733"}


id: PBO:0053247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 2","termid":"PBO:0053247"}


id: PBO:0046176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK3","termid":"PBO:0046176"}


id: GO:0102561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + D-ribofuranose 2,5-bisphosphate = hydrogenphosphate + D-ribofuranose 5-phosphate.","definition_xrefs":["GOC:pz","RHEA:41616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-ribose 2,5-bisphosphate 2-phosphohydrolase activity","secondary_identifiers":["MetaCyc:RXN-14996","EC:3.1.4.57"],"termid":"GO:0102561"}


id: PBO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylbilane synthase Hem3 (predicted)","termid":"PBO:0013745"}


id: PBO:0084083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide dissociation stimulator for Sec4p; functions in the post-Golgi secretory pathway; binds zinc, found both on membranes and in the cytosol","termid":"PBO:0084083"}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: PBO:0042545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 10","termid":"PBO:0042545"}


id: PBO:0087904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon; PDR8 has a paralog, YRR1, that arose from the whole genome duplication","termid":"PBO:0087904"}


id: PBO:0082354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP sulfurylase; catalyzes the primary step of intracellular sulfate activation, essential for assimilatory reduction of sulfate to sulfide, involved in methionine metabolism; human homolog PAPSS2 complements yeast null mutant","termid":"PBO:0082354"}


id: PATO:0005007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape inhering in a bearer by virtue of the bearer's having dentition characterized by high-crowned teeth and enamel which extends far past the gum line, which provides extra material for wear and tear.","definition_xrefs":["DOI:10.1111/j.1469-185X.2011.00176.x"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D shape","termid":"PATO:0002266"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypsodont","termid":"PATO:0005007"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0028154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_epirubicin","termid":"PBO:0028154"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: PBO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj1 (predicted)","termid":"PBO:0001591"}


id: GO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + H2O + NAD+ = 3-hydroxypyruvate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.7","MetaCyc:SERINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine 2-dehydrogenase activity","secondary_identifiers":["RHEA:20884"],"synonyms":[{"name":"L-serine:NAD oxidoreductase (deaminating) activity","type":"related"},{"name":"L-serine:NAD+ 2-oxidoreductase (deaminating)","type":"related"},{"name":"serine dehydrogenase activity","type":"exact"}],"termid":"GO:0050282"}


id: GO:0103116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactofuranose + ATP + H2O = alpha-D-galactofuranose + hydrogenphosphate + ADP + H+.","definition_xrefs":["GOC:pz","PMID:19744923","RHEA:61716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-galactofuranose transporter","secondary_identifiers":["EC:7.5.2.9","MetaCyc:TRANS-RXN0-491"],"synonyms":[{"name":"ATP-dependent alpha-D-galactofuranose transporter activity","type":"exact"},{"name":"ATPase-coupled alpha-D-galactofuranose transporter activity","type":"related"},{"name":"alpha-D-galactofuranose transporter activity","type":"exact"}],"termid":"GO:0103116"}


id: FYPO:0005079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere central core","synonyms":[{"name":"normal protein localisation to chromatin at centromere central core","type":"exact"},{"name":"normal protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric central core","type":"exact"}],"termid":"FYPO:0005079"}


id: FYPO:0000055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"long microtubules","synonyms":[{"name":"elongated microtubules","type":"exact"},{"name":"long microtubules during mitotic cell cycle","type":"related"},{"name":"long microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long microtubules","type":"exact"}],"termid":"FYPO:0000055"}


id: PBO:0058310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4683","termid":"PBO:0058310"}


id: GO:0098994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell envelope components to allow entry into the host cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell envelope","termid":"GO:0098933"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope","secondary_identifiers":["VZ:3938"],"synonyms":[{"name":"disruption of host cell envelope during viral entry","type":"exact"}],"termid":"GO:0098994"}


id: PBO:0091463
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ell Binding Protein","termid":"PBO:0091463"}


id: SO:0000782
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that occurs in nature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural","termid":"SO:0000782"}


id: FYPO:0007397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of heme into the cell is abolished.","definition_xrefs":["PomBase:mah","GO:0140420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished heme import","synonyms":[{"name":"abolished haem import","type":"exact"},{"name":"abolished heme import during mitotic cell cycle","type":"related"},{"name":"abolished heme import during vegetative growth","type":"exact"},{"name":"abolished heme import into cell","type":"exact"},{"name":"heme import abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007397"}


id: PBO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate kinase domain family protein","termid":"PBO:0005502"}


id: GO:0160112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"axonemal B tubule inner sheath","termid":"GO:0160112"}


id: GO:1903604
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90048,102834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cytochrome.","definition_xrefs":["PMID:19721088","GOC:TermGenie","GO_REF:0000068","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome metabolism","type":"exact"}],"termid":"GO:1903604","terms_by_termid":{"GO:1903607":null}}


id: PBO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q22)","termid":"PBO:0047899"}


id: PBO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 5","termid":"PBO:0070539"}


id: GO:1905835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["PMID:22065602","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pyrimidine ribonucleotide","termid":"GO:1905835"}


id: PBO:0068330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 34","termid":"PBO:0068330"}


id: PBO:0048501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 1","termid":"PBO:0048501"}


id: GO:0061613
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84370],"is_not":false,"summary":null,"term":"GO:0061613"}]},"cv_name":"biological_process","definition":"The glycolytic process in which glycerol is catabolized to pyruvate generating ATP and NADH.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"},{"relation_name":"is_a","term_name":"glycerol catabolic process","termid":"GO:0019563"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0044281","GO:0055086","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glycolytic process from glycerol","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061613","terms_by_termid":{"GO:0061613":null}}


id: FYPO:0006470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is lower than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"},{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased mature rRNA level","synonyms":[{"name":"decreased mature rRNA accumulation","type":"related"},{"name":"decreased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature rRNA transcript level","type":"exact"},{"name":"decreased mature ribosomal RNA level","type":"exact"},{"name":"decreased rRNA level","type":"broad"},{"name":"reduced mature rRNA level","type":"exact"}],"termid":"FYPO:0006470"}


id: GO:0009206
data:
  {"annotated_genes":["SJAG_02105","SJAG_01471","SJAG_02598","SJAG_04422","SJAG_01298","SJAG_02887","SJAG_07003","SJAG_05204","SJAG_04122","SJAG_03925","SJAG_03114","SJAG_MIT09","SJAG_00438","SJAG_00133","SJAG_00542","SJAG_04849","SJAG_MIT15","SJAG_02564","SJAG_00915","SJAG_00836","SJAG_MIT37","SJAG_00985"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95567,97697,74300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[67645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[97286,99114,103168,90439,84876,111005,98469,89491,103255,114101,104119,114106,114110,88483,100395,88898,99085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[113093],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate biosynthetic process","termid":"GO:0009145"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate biosynthetic process","termid":"GO:0009201"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"purine ribonucleoside triphosphate anabolism","type":"exact"},{"name":"purine ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside triphosphate formation","type":"exact"},{"name":"purine ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009206","terms_by_termid":{"GO:0006183":null,"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: GO:1901541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901541"}


id: PBO:0057211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378a","termid":"PBO:0057211"}


id: PBO:0074590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 5B","termid":"PBO:0074590"}


id: PBO:0062548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily M member 1, pseudogene","termid":"PBO:0062548"}


id: PBO:0052507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 21","termid":"PBO:0052507"}


id: PBO:0011490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase cdk11","termid":"PBO:0011490"}


id: FYECO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which brefeldin A (BFA) was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ BFA","synonyms":[{"name":"+ brefeldin A","type":"exact"}],"termid":"FYECO:0000319"}


id: GO:0000455
data:
  {"annotated_genes":["SJAG_03755","SJAG_01172","SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74943,87915,101614],"is_not":false,"summary":null,"term":"GO:0000455"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01172":null,"SJAG_03572":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"enzyme-directed rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000455","terms_by_termid":{"GO:0000455":null}}


id: PBO:0075010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-21","termid":"PBO:0075010"}


id: PBO:0091304
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript with all introns spliced represents 85% of total mRNA","termid":"PBO:0091304"}


id: PBO:0053111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCMT1 antisense RNA 2","termid":"PBO:0053111"}


id: PBO:0072453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 17","termid":"PBO:0072453"}


id: PBO:0044342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 26","termid":"PBO:0044342"}


id: PBO:0038725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 20","termid":"PBO:0038725"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: PR:O14260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0592 membrane protein C7D4.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.03c","synonyms":[{"name":"Spom972h-SPAC7D4.03c","type":"exact"}],"termid":"PR:O14260"}


id: PBO:0027577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pseudohyphal_growth","termid":"PBO:0027577"}


id: FYPO:0003920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork arrest at mating-type locus","synonyms":[{"name":"increased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003920"}


id: GO:0008001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fibrinogen (obsolete GO:0008001)","synonyms":[{"name":"fibrinogen","type":"exact"}],"termid":"GO:0008001"}


id: PBO:0026860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_arm_condensation","termid":"PBO:0026860"}


id: PBO:0017653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication preinitiation complex assembly protein","termid":"PBO:0017653"}


id: GO:0103055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A15 + 2-oxoglutarate + O2 = gibberellin A24 + succinate + carbon dioxide + H2O.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberelli A15, 2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN1F-163","RHEA:60780"],"termid":"GO:0103055"}


id: PBO:0004129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Mot1 (predicted)","termid":"PBO:0004129"}


id: FYPO:0004093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A meiosis phenotype in which meiotic telomere clustering is normal (i.e. indistinguishable from wild type). Meiotic telomere clustering is the dynamic reorganization of telomeres in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body.","definition_xrefs":["GO:0045141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal meiotic telomere clustering","synonyms":[{"name":"normal bouquet formation","type":"exact"}],"termid":"FYPO:0004093"}


id: PBO:0063917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CD antisense RNA 2","termid":"PBO:0063917"}


id: GO:0047522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ -> (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+.","definition_xrefs":["EC:1.3.1.48","KEGG_REACTION:R04556","MetaCyc:15-OXOPROSTAGLANDIN-13-REDUCTASE-RXN","KEGG_REACTION:R04557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"15-oxoprostaglandin 13-oxidase activity","synonyms":[{"name":"(5Z)-(15S)-11alpha-hydroxy-9,15-dioxoprostanoate:NAD(P)+ delta13-oxidoreductase activity","type":"related"}],"termid":"GO:0047522"}


id: GO:0018359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of protein to heme P460 via heme P460-bis-L-cysteine-L-tyrosine.","definition_xrefs":["RESID:AA0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme P460 linkage","termid":"GO:0018174"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein-heme P460 linkage via heme P460-bis-L-cysteine-L-tyrosine","secondary_identifiers":["GO:0018385"],"synonyms":[{"name":"protein-haem P460 linkage via haem P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"GO:0018359"}


id: FYPO:0005096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a longer time than normal during anaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle pole body","termid":"FYPO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"increased duration of protein localization to mitotic SPB during anaphase","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to spindle pole body during mitotic anaphase","type":"exact"},{"name":"prolonged protein localization to mitotic spindle pole body during anaphase","type":"exact"}],"termid":"FYPO:0005096"}


id: GO:0015382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + Na+(out) = sulfate(in) + Na+(in).","definition_xrefs":["TC:2.A.47.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:sulfate symporter activity","secondary_identifiers":["Reactome:R-HSA-433099","Reactome:R-HSA-433114"],"synonyms":[{"name":"sodium:sulfate cotransporter activity","type":"broad"},{"name":"sodium:sulphate symporter activity","type":"exact"}],"termid":"GO:0015382"}


id: PBO:0038812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 19","termid":"PBO:0038812"}


id: PR:O94578
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mic26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.05c","synonyms":[{"name":"Spom972h-mic26","type":"exact"}],"termid":"PR:O94578"}


id: FYPO:0007393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum with both ends at the cell tip(s). The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:32101481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized, misoriented septum","termid":"FYPO:0003210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"septum mislocalized to cell tip","synonyms":[{"name":"septum mislocalized to cell tip during mitotic cell cycle","type":"related"},{"name":"septum mislocalized to cell tip during vegetative growth","type":"exact"},{"name":"tip septation","type":"exact"}],"termid":"FYPO:0007393"}


id: PBO:0077432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167B","termid":"PBO:0077432"}


id: GO:0120232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in prenyl-FMNH2, an essential cofactor for the decarboxylase enzymes UbiD and Fdc1.","definition_xrefs":["PMID:25647642","PMID:26083754","GOC:krc","PMID:26083743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"prenyl-FMNH2 biosynthetic process","synonyms":[{"name":"prenyl-FMNH2 anabolism","type":"exact"},{"name":"prenyl-FMNH2 biosynthesis","type":"exact"},{"name":"prenyl-FMNH2 formation","type":"exact"},{"name":"prenyl-FMNH2 synthesis","type":"exact"},{"name":"prenylated FMNH2 anabolism","type":"exact"},{"name":"prenylated FMNH2 biosynthesis","type":"exact"},{"name":"prenylated FMNH2 biosynthetic process","type":"exact"},{"name":"prenylated FMNH2 formation","type":"exact"},{"name":"prenylated FMNH2 synthesis","type":"exact"}],"termid":"GO:0120232"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:aruk","GOC:sart","PMID:20080302","GOC:dph","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0046386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOLA2 divergent transcript","termid":"PBO:0046386"}


id: GO:1901107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving granaticin.","definition_xrefs":["UniPathway:UPA00175","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"granaticin metabolic process","synonyms":[{"name":"granaticin metabolism","type":"exact"}],"termid":"GO:1901107"}


id: PBO:0027542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monopolar_intracellular_mitochondrion_distribution","termid":"PBO:0027542"}


id: PBO:0081296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 76","termid":"PBO:0081296"}


id: PBO:0040666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBX high mobility group box domain containing","termid":"PBO:0040666"}


id: FYPO:0002921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone ubiquitination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"},{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone ubiquitination during vegetative growth","synonyms":[{"name":"abnormal histone ubiquitination during mitotic cell cycle","type":"related"},{"name":"abnormal histone ubiquitinylation during vegetative growth","type":"exact"},{"name":"abnormal histone ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002921"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: GO:0031140
data:
  {"annotated_genes":["SJAG_03735","SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[110743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon starvation for one or more nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00781":null,"SJAG_03735":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"induction of conjugation upon nutrient starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031140","terms_by_termid":{"GO:0031141":null,"GO:0031142":null}}


id: GO:0060901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that modulates the rate, frequency or extent of the hair cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair cycle","termid":"GO:0042634"},{"relation_name":"is_a","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hair cycle by canonical Wnt signaling pathway","synonyms":[{"name":"regulation of hair cycle by Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of hair cycle by canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0060901"}


id: PBO:0085316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide (PI) binding protein; involved in micronucleophagy; belongs to the PROPPIN family of proteins defined by a seven-bladed beta-propeller fold and FRRG motif required for PI binding; displays punctate cytoplasmic localization","termid":"PBO:0085316"}


id: GO:1905588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any plant-type cell wall modification that is involved in stomatal movement.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:27720618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"part_of","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall modification involved in stomatal movement","synonyms":[{"name":"cellulose and pectin-containing cell wall modification involved in stomatal movement","type":"exact"}],"termid":"GO:1905588"}


id: PBO:0054989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2403","termid":"PBO:0054989"}


id: GO:0047216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + UDP-galactose = O-alpha-D-galactosyl-(1,3)-1D-myo-inositol + UDP.","definition_xrefs":["MetaCyc:2.4.1.123-RXN","EC:2.4.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"inositol 3-alpha-galactosyltransferase activity","secondary_identifiers":["RHEA:12464"],"synonyms":[{"name":"UDP-D-galactose:inositol galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:myo-inositol 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:myo-inositol 3-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:myo-inositol 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol synthase activity","type":"related"},{"name":"inositol 1-alpha-galactosyltransferase activity","type":"exact"},{"name":"uridine diphosphogalactose-inositol galactosyltransferase activity","type":"related"}],"termid":"GO:0047216"}


id: PBO:0063360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer expressed EZH2 associated transcript","termid":"PBO:0063360"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: PBO:0028577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_farnesyltransferase_activity","termid":"PBO:0028577"}


id: PBO:0005050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase Dga1","termid":"PBO:0005050"}


id: PBO:0004432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA acetyltransferase (predicted)","termid":"PBO:0004432"}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: GO:2000350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling via the CD40 signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of CD40 signaling pathway","termid":"GO:2000348"},{"relation_name":"positively_regulates","term_name":"CD40 signaling pathway","termid":"GO:0023035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CD40 signaling pathway","synonyms":[{"name":"positive regulation of CD40 signalling pathway","type":"exact"}],"termid":"GO:2000350"}


id: PBO:0060190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 8","termid":"PBO:0060190"}


id: PBO:0031154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_myo-inositol_import","termid":"PBO:0031154"}


id: GO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Leu-Xaa bond in angiotensinogen to generate angiotensin I.","definition_xrefs":["EC:3.4.23.15"],"gene_count":0,"genotype_count":0,"name":"obsolete renin activity (obsolete GO:0004195)","synonyms":[{"name":"angiotensin-forming enzyme activity","type":"related"},{"name":"angiotensinogenase activity","type":"related"},{"name":"renin activity","type":"exact"}],"termid":"GO:0004195"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: PBO:0053359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265-2, pseudogene","termid":"PBO:0053359"}


id: GO:0016677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor","secondary_identifiers":["EC:1.9.6.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, nitrogenous group as acceptor","type":"exact"}],"termid":"GO:0016677"}


id: PBO:0046884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A10, pseudogene","termid":"PBO:0046884"}


id: PBO:0064012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 46","termid":"PBO:0064012"}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: GO:0031632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle membrane organization","termid":"GO:1901634"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"activation of synaptic vesicle fusion to presynaptic membrane","type":"narrow"},{"name":"negative regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"positive regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"exact"},{"name":"stimulation of synaptic vesicle fusion to presynaptic membrane","type":"narrow"},{"name":"up regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"up regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"up-regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"up-regulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"},{"name":"upregulation of synaptic vesicle fusion to presynaptic membrane","type":"exact"}],"termid":"GO:0031632"}


id: FYPO:0004700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"bent cell","termid":"FYPO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"bent vegetative cell","synonyms":[{"name":"bent cell during vegetative growth","type":"exact"},{"name":"bent vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, bent during vegetative growth","type":"exact"}],"termid":"FYPO:0004700"}


id: PBO:0090893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-mannosyltransferase Och1","termid":"PBO:0090893"}


id: PBO:0028092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_unequal_chromosome_segregation","termid":"PBO:0028092"}


id: SO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby an intron is gained by the processed transcript; usually a result of an alteration of the donor or acceptor.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_gain_variant","synonyms":[{"name":"intron gain","type":"exact"},{"name":"intron gain variant","type":"exact"}],"termid":"SO:0001573"}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: GO:0046245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of styrene, an aromatic hydrocarbon liquid used in the manufacture of polystyrene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene biosynthetic process (obsolete GO:0046245)","synonyms":[{"name":"styrene anabolism","type":"exact"},{"name":"styrene biosynthesis","type":"exact"},{"name":"styrene biosynthetic process","type":"exact"},{"name":"styrene formation","type":"exact"},{"name":"styrene synthesis","type":"exact"}],"termid":"GO:0046245"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: PBO:0070432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 2","termid":"PBO:0070432"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: PBO:0061004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS antisense RNA 1","termid":"PBO:0061004"}


id: GO:0047302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + UDP-2-acetamido-4-amino-2,4,6-trideoxy-D-glucose = L-glutamate + UDP-2-acetamido-4-dehydro-2,6-dideoxy-beta-D-glucose.","definition_xrefs":["PMID:16286454","RHEA:31663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose transaminase activity","secondary_identifiers":["EC:2.6.1.34","KEGG_REACTION:R04529","MetaCyc:RXN-12812"],"synonyms":[{"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"exact"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose transaminase activity","type":"exact"},{"name":"uridine diphospho-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"related"}],"termid":"GO:0047302"}


id: PBO:0074875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 57","termid":"PBO:0074875"}


id: PBO:0034380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_orthology_relationship_with","termid":"PBO:0034380"}


id: GO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"positively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting in absence of injury","synonyms":[{"name":"activation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"stimulation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"up regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"up-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"upregulation of collateral sprouting in the absence of injury","type":"exact"}],"termid":"GO:0048697"}


id: GO:0010361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which blue light modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:dph","GOC:tb","PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of anion channel activity by blue light","synonyms":[{"name":"regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010361"}


id: PBO:0053402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 332","termid":"PBO:0053402"}


id: GO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication by electrical coupling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication by electrical coupling","type":"exact"}],"termid":"GO:0086054"}


id: PBO:0069288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 544, pseudogene","termid":"PBO:0069288"}


id: PBO:0059699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 7","termid":"PBO:0059699"}


id: GO:1905348
data:
  {"annotated_genes":["SJAG_01581","SJAG_01623","SJAG_03796","SJAG_02374","SJAG_02275","SJAG_04582","SJAG_01044","SJAG_03425","SJAG_03234","SJAG_00754","SJAG_04062","SJAG_06613","SJAG_00955","SJAG_01056","SJAG_04252","SJAG_04907","SJAG_03952","SJAG_01551","SJAG_01260","SJAG_04916","SJAG_02547","SJAG_01369","SJAG_02553","SJAG_00623","SJAG_03328","SJAG_03789","SJAG_00306"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73893,77915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"},{"annotations":[87350,90546,113620,99544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[71376,99968,108705,86764,113655,100178,71507,97512,94991,110476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[86765,110478,100180,92356,101044,75329,110558,71272,113656,101045,71506,73295,108708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[84538,112304,109775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[73583,77718,71583,101313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endonuclease activity.","definition_xrefs":["PMID:18413719","GOC:TermGenie","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00623":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01044":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endonuclease complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1905348","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0048476":null,"GO:0090730":null,"GO:0120330":null}}


id: FYPO:0003595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell grows in a shape that consists of two curves in opposite directions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"S-shaped cell","synonyms":[{"name":"S-shaped vegetative cell","type":"exact"},{"name":"Z-shaped cell","type":"exact"},{"name":"kinked cell","type":"exact"},{"name":"kinky cell","type":"exact"},{"name":"sigmoid cell","type":"exact"}],"termid":"FYPO:0003595"}


id: PBO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase","termid":"PBO:0043973"}


id: GO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a series of septin structures that are localized in the bud neck of a budding fungal cell during the cell cycle.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin structure","termid":"GO:0000399"}


id: PBO:0011433
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus SJAG_03327","termid":"PBO:0011433"}


id: GO:0070679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inositol 1,4,5 trisphosphate.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inositol 1,4,5 trisphosphate binding","synonyms":[{"name":"IP3 binding","type":"exact"},{"name":"InsP3 binding","type":"exact"}],"termid":"GO:0070679"}


id: PBO:0078128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 10","termid":"PBO:0078128"}


id: PBO:0044622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"doublecortin domain containing 1","termid":"PBO:0044622"}


id: PBO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)-specific ribonuclease complex subunit Pan3 (predicted)","termid":"PBO:0002107"}


id: PATO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000554 cold sensitive (obsolete PATO:0000554)","termid":"PATO:0000554"}


id: PBO:0069460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 725, pseudogene","termid":"PBO:0069460"}


id: GO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of melanocyte differentiation","termid":"GO:0045635"},{"relation_name":"is_a","term_name":"regulation of early stripe melanocyte differentiation","termid":"GO:0050939"},{"relation_name":"negatively_regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of early stripe melanocyte differentiation","synonyms":[{"name":"down regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"down-regulation of early stripe melanocyte differentiation","type":"exact"},{"name":"downregulation of early stripe melanocyte differentiation","type":"exact"},{"name":"inhibition of early stripe melanocyte differentiation","type":"narrow"},{"name":"negative regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050947"}


id: FYPO:0006253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and transfer RNA (tRNA) is normal (i.e. indistinguishable from wild type). One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-RNA interaction","termid":"FYPO:0002357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0002131","FYPO:0000257"],"is_obsolete":false,"name":"normal tRNA binding","synonyms":[{"name":"normal protein-tRNA interaction","type":"exact"},{"name":"normal protein-transfer RNA interaction","type":"exact"},{"name":"normal transfer RNA binding","type":"exact"}],"termid":"FYPO:0006253"}


id: PBO:0091547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SPT15","termid":"PBO:0091547"}


id: GO:0010897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:tb","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of triglyceride catabolic process","synonyms":[{"name":"negative regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010897"}


id: PBO:0031738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mating_type_switching","termid":"PBO:0031738"}


id: PR:Q9HFE6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein P16F5.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.06","synonyms":[{"name":"Spom972h-nop8","type":"exact"}],"termid":"PR:Q9HFE6"}


id: FYPO:0001821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells in an originally homothallic (h90) population express P-specific information from the mat1 locus.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of heterothallic h+ cells","synonyms":[{"name":"increased amount of heterothallic H+ cells","type":"exact"}],"termid":"FYPO:0001821"}


id: GO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of the plasma membrane potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086039"}


id: PBO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0086043"}


id: GO:0097301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20412803","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097301)","synonyms":[{"name":"cellular potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"potassium ion homeostasis by positive regulation of transcription from RNA polymerase II promoter","type":"broad"}],"termid":"GO:0097301"}


id: FYECO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamatic acid as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamate nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"PMG","type":"narrow"},{"name":"glucose minimal medium, glutamate nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamate nitrogen source","type":"related"}],"termid":"FYECO:0000263"}


id: GO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the chromatophore, containing either both large and small subunits or just small subunits which carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribulose bisphosphate carboxylase complex","termid":"GO:0048492"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chromatophore ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"}],"termid":"GO:0048494"}


id: PBO:0067258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 332, pseudogene","termid":"PBO:0067258"}


id: PBO:0046393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1","termid":"PBO:0046393"}


id: PBO:0031320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_pravastatin","termid":"PBO:0031320"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: PBO:0078068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 58 (non-functional)","termid":"PBO:0078068"}


id: GO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized precursor cell acquires specialized features of a lymphocyte. A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.","definition_xrefs":["CL:0000542","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte differentiation","secondary_identifiers":["GO:0046650"],"synonyms":[{"name":"lymphocyte cell differentiation","type":"exact"},{"name":"lymphocyte development","type":"related"},{"name":"lymphocytic blood cell differentiation","type":"exact"}],"termid":"GO:0030098"}


id: GO:0071785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) cisternal network in a stable functional or structural state. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["PMID:16469703","GOC:mah","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network maintenance","synonyms":[{"name":"ER cisternal network maintenance","type":"exact"}],"termid":"GO:0071785"}


id: SO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Zas1 protein binds. The consensus sequence is 5'-(Y)CCCCAY-3'.","definition_xrefs":["PMID:29735745","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zas1_recognition_motif","synonyms":[{"name":"Zas1 recognition motif","type":"exact"}],"termid":"SO:0002215"}


id: FYPO:0001879
data:
  {"alleles_by_uniquename":{"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114538,114537,114544],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a smaller diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"thin cell","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_03581","SJAG_04280","SJAG_03048"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased cell diameter","type":"exact"},{"name":"decreased cell thickness","type":"exact"},{"name":"decreased cell width","type":"exact"}],"termid":"FYPO:0001879","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that mediates editing of the mRNA encoding apolipoprotein B; catalyzes the deamination of C to U (residue 6666 in the human mRNA). Contains a catalytic subunit, APOBEC-1, and other proteins (e.g. human ASP; rat ASP and KSRP).","definition_xrefs":["PMID:10781591","PMID:12683974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme complex","synonyms":[{"name":"APOBEC","type":"exact"},{"name":"apoB mRNA editing enzyme complex","type":"exact"}],"termid":"GO:0030895"}


id: PBO:0068617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 69, pseudogene","termid":"PBO:0068617"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100570],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: PBO:0079961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 X-linked","termid":"PBO:0079961"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: PBO:0028487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0028487"}


id: GO:0043292
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:go_curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"contractile fiber","synonyms":[{"name":"contractile fibre","type":"exact"}],"termid":"GO:0043292"}


id: PATO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"male fertility","termid":"PATO:0000279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-sterile","termid":"PATO:0001762"}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: GO:0106049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cellular response to osmotic stress.","definition_xrefs":["PMID:10398679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to osmotic stress","termid":"GO:0047484"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"}


id: PBO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Not1 (predicted)","termid":"PBO:0000956"}


id: PBO:0049727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8","termid":"PBO:0049727"}


id: GO:0010530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transposition. Transposition results in the movement of discrete segments of DNA between nonhomologous sites.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition (obsolete GO:0010530)","termid":"GO:0010530"}


id: GO:0103083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(4'-methylthio)butylmalate = 3-(4'-methylthio)butylmalate.","definition_xrefs":["EC:5.4.4.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"methylthiobutylmalate isomerase activity","secondary_identifiers":["MetaCyc:RXNQT-4167"],"termid":"GO:0103083"}


id: GO:0008955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-diphosphoundecaprenol + GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol = [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-diphosphoundecaprenol + undecaprenyl diphosphate.","definition_xrefs":["EC:2.4.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"peptidoglycan glycosyltransferase activity","secondary_identifiers":["RHEA:23708","MetaCyc:RXN-14712"],"synonyms":[{"name":"PG-II activity","type":"related"},{"name":"bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"penicillin binding protein (3 or 1B) activity","type":"narrow"},{"name":"peptidoglycan TGase activity","type":"related"},{"name":"peptidoglycan transglycosylase activity","type":"related"},{"name":"undecaprenyldiphospho-N-acetyl-D-glucosaminyl-(1->4)-(N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase activity","type":"related"}],"termid":"GO:0008955"}


id: PBO:0076892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 46","termid":"PBO:0076892"}


id: GO:0048216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Golgi vesicle fusion to target membrane.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of Golgi vesicle fusion to target membrane","termid":"GO:0048214"},{"relation_name":"negatively_regulates","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"negative regulation of Golgi vesicle fusion to target membrane","synonyms":[{"name":"down regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"down-regulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"downregulation of Golgi vesicle fusion to target membrane","type":"exact"},{"name":"inhibition of Golgi vesicle fusion to target membrane","type":"narrow"}],"termid":"GO:0048216"}


id: GO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an avascular cornea over time, from its formation to the mature structure. Corneal avascularity (the absence of blood vessels in the cornea) is required for optical clarity and optimal vision. Avascular corneas are present in most animals, except Manatees.","definition_xrefs":["PMID:16849433","PMID:17051153","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea development in camera-type eye","termid":"GO:0061303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"avascular cornea development in camera-type eye","synonyms":[{"name":"avascular cornea development","type":"exact"}],"termid":"GO:0036331"}


id: GO:1990858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.","definition_xrefs":["PMID:26306444","PMID:25996210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lectin","termid":"GO:1990840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lectin","termid":"GO:1990858"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: PBO:0033747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033747"}


id: GO:0002371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a dendritic cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"dendritic cell cytokine production","termid":"GO:0002371"}


id: PR:Q9P7W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syo2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7W7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ARM-like repeat-containing protein C1703.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.03c","synonyms":[{"name":"Spom972h-syo2","type":"exact"}],"termid":"PR:Q9P7W7"}


id: PBO:0042569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A divergent transcript","termid":"PBO:0042569"}


id: GO:1905783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a CENP-A containing nucleosome into its constituent components.","definition_xrefs":["PMID:27666591","GOC:TermGenie","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete CENP-A containing nucleosome disassembly (obsolete GO:1905783)","synonyms":[{"name":"centromere specific nucleosome disassembly","type":"related"},{"name":"centromere-specific nucleosome disassembly","type":"related"},{"name":"centromeric nucleosome disassembly","type":"related"}],"termid":"GO:1905783"}


id: PBO:0078957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 1-1","termid":"PBO:0078957"}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: PBO:0084819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0084819"}


id: GO:0015520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).","definition_xrefs":["TC:2.A.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracycline transmembrane transporter activity","termid":"GO:0008493"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tetracycline:proton antiporter activity","synonyms":[{"name":"tetracyclin:hydrogen antiporter activity","type":"exact"},{"name":"tetracyclin:proton antiporter activity","type":"exact"},{"name":"tetracycline:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015520"}


id: FYPO:0005616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during cellular response to bleomycin","termid":"FYPO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to bleomycin","synonyms":[{"name":"abolished protein phosphorylation during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to bleomycin during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to bleomycin","type":"exact"}],"termid":"FYPO:0005616"}


id: GO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-lipid complex, any macromolecular complex that contains both protein and lipid molecules.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein-lipid complex binding","termid":"GO:0071814"}


id: _global:inheres_in_part_of
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"q characteristic of part of w if and only if there exists some p such that q inheres in p and p part of w.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in_part_of","secondary_identifiers":["RO:0002314"],"termid":"_global:inheres_in_part_of"}


id: PBO:0064325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleiotropic regulator 1","termid":"PBO:0064325"}


id: GO:0035263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex-specific patterns of primoridia growth and differentiation in the genital imaginal disc. The anal primordium of the genital disc develops in both sexes, but depending on the genetic sex gives rise to either male or female analia. Depending on the genetic sex, only one of the two genital primordia develop. In females the female genital primordium develops and gives rise to the female genitalia whereas the male primordium is repressed. Conversely, in males the male genital primordium develops and gives rise to the male genitalia whereas the female genital primordium is repressed.","definition_xrefs":["PMID:11494318","PMID:11290302","PMID:11702781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sex differentiation","termid":"GO:0007548"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc sexually dimorphic development","termid":"GO:0035263"}


id: PBO:0051380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6D-21 (non-functional)","termid":"PBO:0051380"}


id: PBO:0053794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1048","termid":"PBO:0053794"}


id: PBO:0078113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 2","termid":"PBO:0078113"}


id: PBO:0046676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 2","termid":"PBO:0046676"}


id: GO:0102806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + cyanin betaine = shisonin + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-coumaroyl-CoA:cyanidin-3,5-diglucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8170"],"termid":"GO:0102806"}


id: PBO:0064232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 2","termid":"PBO:0064232"}


id: GO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell tolerance induction","termid":"GO:0002666"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell anergy","synonyms":[{"name":"activation of T cell anergy","type":"narrow"},{"name":"positive regulation of T lymphocyte anergy","type":"exact"},{"name":"positive regulation of T-cell anergy","type":"exact"},{"name":"positive regulation of T-lymphocyte anergy","type":"exact"},{"name":"stimulation of T cell anergy","type":"narrow"},{"name":"up regulation of T cell anergy","type":"exact"},{"name":"up-regulation of T cell anergy","type":"exact"},{"name":"upregulation of T cell anergy","type":"exact"}],"termid":"GO:0002669"}


id: GO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism effects a change in the frequency, rate or extent of the activity of an ion channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of molecular function in another organism","termid":"GO:0044359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of ion channel activity in another organism","synonyms":[{"name":"modulation of ion channel activity in other organism","type":"exact"},{"name":"regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044561"}


id: FYPO:0000233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"long cytoplasmic microtubules","synonyms":[{"name":"elongated cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"long cytoplasmic microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defect, long cytoplasmic microtubules","type":"exact"},{"name":"microtubule organization defects, long cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0000233"}


id: GO:0052825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,5,6-pentakisphosphate + H2O = inositol-3,4,5,6-tetrakisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol pentakisphosphate phosphatase activity","termid":"GO:0052827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,3,4,5,6-pentakisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855219"],"termid":"GO:0052825"}


id: PBO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 2","termid":"PBO:0061669"}


id: GO:0034737
data:
  {"annotated_genes":["SJAG_04059","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75626,78741],"is_not":false,"summary":null,"term":"GO:0034737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + ergosterol = CoA + ergosterol ester.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"ergosterol O-acyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0034737","terms_by_termid":{"GO:0034737":null}}


id: GO:0018528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iminodiacetate + OH- = H+ + 2 e- + glyoxylate + glycine.","definition_xrefs":["UM-BBD_reactionID:r0589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iminodiacetate dehydrogenase activity","termid":"GO:0018528"}


id: PATO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A peramorphic growth quality which is due to a delayed offset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peramorphic growth","termid":"PATO:0001752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermorphic growth","termid":"PATO:0001755"}


id: FYPO:0003725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003725"}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["KEGG_REACTION:R04235","MetaCyc:2.7.4.19-RXN"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: PBO:0083062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrolipoyl transsuccinylase; component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes the oxidative decarboxylation of alpha-ketoglutarate to succinyl-CoA in the TCA cycle; phosphorylated","termid":"PBO:0083062"}


id: PBO:0068548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 154, pseudogene","termid":"PBO:0068548"}


id: PR:O13950
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle receptor subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR19326:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle receptor subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.07c","secondary_identifiers":["UniProtKB:O13950"],"synonyms":[{"name":"SPAC23H4.07c","type":"related"},{"name":"SR-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRPRB","type":"exact"}],"termid":"PR:O13950"}


id: GO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle viral transcription","synonyms":[{"name":"(delayed) early viral mRNA transcription","type":"related"}],"termid":"GO:0019084"}


id: PBO:0076447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 3","termid":"PBO:0076447"}


id: PBO:0063082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 1","termid":"PBO:0063082"}


id: PBO:0047421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 11","termid":"PBO:0047421"}


id: PBO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_fusion_during_mating","termid":"PBO:0031698"}


id: FYPO:0001493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one nucleus apiece.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated multinucleate vegetative cell","synonyms":[{"name":"SIN phenotype","type":"related"},{"name":"elongated inviable multinucleate cell during vegetative growth","type":"exact"},{"name":"elongated multinucleate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0001493"}


id: GO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075207)","synonyms":[{"name":"negative regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075207"}


id: PBO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion mutant expression profiling","termid":"PBO:0000206"}


id: GO:0035016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in length of the aristal laterals. The arista is the terminal segment of the antenna and consists of a central core and a series of lateral extensions.","definition_xrefs":["GOC:bf","PMID:11404081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"antennal morphogenesis","termid":"GO:0048800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elongation of arista lateral","termid":"GO:0035016"}


id: PBO:0050043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, F","termid":"PBO:0050043"}


id: RO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the relationship holds based on the presence or absence of statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_dependence_to","termid":"RO:0002609"}


id: MOD:00482
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-formyl-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:3042771","PubMed:11152118","RESID:AA0021#MET","PubMed:2165784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-methionine (Met)","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"NFoMet","type":"exact"}],"termid":"MOD:00482"}


id: PBO:0065130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cGMP-dependent 2","termid":"PBO:0065130"}


id: GO:0072677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an eosinophil within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah","GOC:BHF","CL:0000771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte migration","termid":"GO:0097530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil migration","termid":"GO:0072677"}


id: PBO:0039552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 46","termid":"PBO:0039552"}


id: PBO:0055732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 antisense RNA 1","termid":"PBO:0055732"}


id: GO:1904450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartate secretion.","definition_xrefs":["PMID:2342602","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"positively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartate secretion","synonyms":[{"name":"activation of aspartate secretion","type":"narrow"},{"name":"up regulation of aspartate secretion","type":"exact"},{"name":"up-regulation of aspartate secretion","type":"exact"},{"name":"upregulation of aspartate secretion","type":"exact"}],"termid":"GO:1904450"}


id: PATO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000153 absolute threshold (obsolete PATO:0000153)","termid":"PATO:0000153"}


id: PBO:0077037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 5","termid":"PBO:0077037"}


id: GO:0055064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of chloride ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion homeostasis","termid":"GO:0055081"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"chloride ion homeostasis","termid":"GO:0055064"}


id: PR:000050218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been ubiquitinated on Lys-15. Example: UniProtKB:P09988, 2-136, Lys-15, MOD:01148.","definition_xrefs":["PomBase:MAH","PMID:31468675","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/InitMet-/Ubiq:(K14)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3K14ub","type":"related"},{"name":"hht2/InitMet-/Ubiq:(K14)","type":"exact"},{"name":"hht2/InitMet-/Ubiq:(K15)","type":"exact"}],"termid":"PR:000050218"}


id: GO:0033090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrathymic T cell differentiation","termid":"GO:0033082"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"positively_regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of extrathymic T cell differentiation","synonyms":[{"name":"positive regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033090"}


id: GO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an AV node cardiomyocyte and a bundle of His cardiac muscle cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"AV node cell to bundle of His cell communication","termid":"GO:0086067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"AV node cell to bundle of His cell communication by electrical coupling","synonyms":[{"name":"atrioventricular node cell to bundle of His cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086053"}


id: PATO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity to irradiation which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitivity to irradiation","termid":"PATO:0001806"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity to irradiation","synonyms":[{"name":"high sensitivity to irradiation","type":"exact"}],"termid":"PATO:0001808"}


id: PBO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 4","termid":"PBO:0061313"}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: GO:0140268
data:
  {"annotated_genes":["SJAG_03170","SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76045,99797],"is_not":false,"summary":null,"term":"GO:0140268"}]},"cv_name":"cellular_component","definition":"A contact site between the endoplasmic reticulum membrane and the plasma membrane, structured by bridging complexes.","definition_xrefs":["PMID:23041194","PMID:29782498","PMID:27955928","PMID:29290560","PMID:30012696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01329":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane contact site","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"EPCS","type":"exact"},{"name":"ER-PM contact site","type":"exact"},{"name":"ER-plasma membrane contact site","type":"exact"},{"name":"endoplasmic reticulum-plasma membrane contact junction","type":"exact"}],"termid":"GO:0140268","terms_by_termid":{"GO:0140268":null}}


id: PBO:0081105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB1 transcriptional regulator RNA","termid":"PBO:0081105"}


id: PBO:0003939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1 (predicted)","termid":"PBO:0003939"}


id: PR:P87295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC16A10.03c gene.","definition_xrefs":["UniProtKB:P87295","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pep5-like zinc finger protein C16A10.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.03c","synonyms":[{"name":"Spom972h-SPAC16A10.03c","type":"exact"}],"termid":"PR:P87295"}


id: PBO:0005074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf6","termid":"PBO:0005074"}


id: PBO:0067297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 382, pseudogene","termid":"PBO:0067297"}


id: GO:0051716
data:
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