# terms

id: PBO:0076828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis, prostate and placenta expressed","termid":"PBO:0076828"}


id: GO:0021845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of migrating interneurons to neurotransmitters that alter electrical activity in cells in calcium dependent manner.","definition_xrefs":["GOC:dgh","PMID:12626695","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"part_of","term_name":"substrate-independent telencephalic tangential interneuron migration","termid":"GO:0021843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotransmitter-mediated guidance of interneurons involved in substrate-independent cerebral cortex tangential migration","termid":"GO:0021845"}


id: PBO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELFN1 antisense RNA 1","termid":"PBO:0046170"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: PBO:0069314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 572, pseudogene","termid":"PBO:0069314"}


id: PBO:0053832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1097","termid":"PBO:0053832"}


id: GO:0032725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of granulocyte macrophage colony-stimulating factor production","termid":"GO:0032645"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045425"],"synonyms":[{"name":"activation of granulocyte macrophage colony-stimulating factor production","type":"narrow"},{"name":"positive regulation of GM-CSF production","type":"exact"},{"name":"positive regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"},{"name":"stimulation of granulocyte macrophage colony-stimulating factor production","type":"narrow"},{"name":"up regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"up-regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"upregulation of granulocyte macrophage colony-stimulating factor production","type":"exact"}],"termid":"GO:0032725"}


id: PBO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERBB receptor feedback inhibitor 1","termid":"PBO:0046532"}


id: PBO:0067713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 11","termid":"PBO:0067713"}


id: PBO:0076986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 4","termid":"PBO:0076986"}


id: GO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin sulfate.","definition_xrefs":["EC:2.8.2.5","EC:2.8.2.17","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}


id: PBO:0039089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor associated protein","termid":"PBO:0039089"}


id: FYPO:0002058
data:
  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sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A 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type"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_01946","SJAG_03575","SJAG_02668","SJAG_03118","SJAG_03689","SJAG_03198"],"name":"viable cell population","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_01753","SJAG_03920","SJAG_04464","SJAG_00426","SJAG_00429","SJAG_01242","SJAG_04697","SJAG_03892","SJAG_04843","SJAG_03453","SJAG_02763","SJAG_03449","SJAG_00266","SJAG_00409","SJAG_01355","SJAG_00364","SJAG_01946","SJAG_00514","SJAG_03198","SJAG_02592","SJAG_00601","SJAG_04703","SJAG_05207","SJAG_02527","SJAG_03720"],"single_locus_genotype_uniquenames":["rad26delta","vps4delta","scd1delta","mdh1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","vps32delta","man1delta","ned1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","scd2delta","cem1delta","gms1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","atf1delta","ras1delta","for3delta","tel1delta","sdh3delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","cmp7delta","cox6delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","rad3delta","sty1delta","rip1delta","gpd1delta","oar2delta","fum1delta"],"termid":"FYPO:0002058","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000103":null,"FYECO:0000117":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000080":null,"FYPO:0000082":null,"FYPO:0000674":null,"FYPO:0001234":null,"FYPO:0001355":null,"FYPO:0001357":null,"FYPO:0001408":null,"FYPO:0001690":null,"FYPO:0002058":null,"FYPO:0004481":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0079269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39B","termid":"PBO:0079269"}


id: PBO:0053777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1023","termid":"PBO:0053777"}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PR:O13814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.17c","synonyms":[{"name":"Spom972h-mdm10","type":"exact"},{"name":"mitochondrial inheritance component mdm10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13814"}


id: PBO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone Sco1 (predicted)","termid":"PBO:0003307"}


id: PBO:0058565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6507","termid":"PBO:0058565"}


id: PR:Q9USK5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TIP41-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21021:SF16","PRO:DNx","OMA:SCHPO04568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2A phosphatase activator tip41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.16","secondary_identifiers":["UniProtKB:Q9USK5"],"synonyms":[{"name":"PP2A phosphatase activator tip41 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TIPRL","type":"exact"}],"termid":"PR:Q9USK5"}


id: GO:0021691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:cls","GOC:dph","ISBN:0838580343","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer maturation","termid":"GO:0021691"}


id: PBO:0079627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 O","termid":"PBO:0079627"}


id: GO:0140997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H4.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0140096","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"histone H4 kinase activity","termid":"GO:0140997"}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: GO:0009918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydroepisterol = 24-methylenecholesterol.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sterol delta7 reductase activity","secondary_identifiers":["MetaCyc:RXN-707"],"synonyms":[{"name":"sterol delta-7 reductase activity","type":"exact"}],"termid":"GO:0009918"}


id: PBO:0060292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6B pseudogene 1","termid":"PBO:0060292"}


id: PBO:0049744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit gamma 2","termid":"PBO:0049744"}


id: GO:0043995
data:
  {"annotated_genes":["SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84201],"is_not":false,"summary":null,"term":"GO:0043995"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H4 L-lysine (position 5) = CoA + histone H4 N6-acetyl-L-lysine (position 5).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 acetyltransferase activity","termid":"GO:0010485"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0034212","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H4K5 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone acetylase activity (H4-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H4-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H4-K5 specific)","type":"exact"}],"termid":"GO:0043995","terms_by_termid":{"GO:0043995":null}}


id: PBO:0029318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_subtelomere_during_mitotic_S_phase","termid":"PBO:0029318"}


id: SO:0000588
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self spliced intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"ribozymic","termid":"SO:0001186"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autocatalytically_spliced_intron","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:autocatalytically_spliced_intron","type":"exact"},{"name":"autocatalytically spliced intron","type":"exact"}],"termid":"SO:0000588"}


id: PR:O59770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF10","PRO:DNx","OMA:SCHPO04533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.04c","secondary_identifiers":["UniProtKB:O59770"],"synonyms":[{"name":"Spom972h-PSMA3","type":"exact"}],"termid":"PR:O59770"}


id: PBO:0078674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 7-1","termid":"PBO:0078674"}


id: PBO:0031431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glycerol_dehydrogenase_activity","termid":"PBO:0031431"}


id: PBO:0069742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1023, pseudogene","termid":"PBO:0069742"}


id: PBO:0087566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of succinate dehydrogenase and of TIM22 translocase; functions as cytochrome b subunit of succinate dehydrogenase, which couples oxidation of succinate to transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; also required for mitochondrial inner membrane protein import as part of the TIM22 complex; SDH3 has a paralog, SHH3, that arose from the whole genome duplication","termid":"PBO:0087566"}


id: GO:0099055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic membrane (obsolete GO:0099055)","termid":"GO:0099055"}


id: GO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork.","definition_xrefs":["ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ruffle","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0001726"}


id: GO:0008993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate.","definition_xrefs":["EC:2.7.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnulokinase activity","secondary_identifiers":["RHEA:20117","MetaCyc:RHAMNULOKIN-RXN"],"synonyms":[{"name":"ATP:L-rhamnulose 1-phosphotransferase activity","type":"related"},{"name":"L-rhamnulokinase activity","type":"related"},{"name":"L-rhamnulose kinase activity","type":"related"},{"name":"RhuK","type":"related"},{"name":"rhamnulokinase (phosphorylating)","type":"related"},{"name":"rhamnulose kinase activity","type":"related"}],"termid":"GO:0008993"}


id: PBO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit (predicted)","termid":"PBO:0005230"}


id: PBO:0072149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 26","termid":"PBO:0072149"}


id: PR:O94436
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.02","synonyms":[{"name":"SWI/SNF chromatin-remodeling complex subunit tfg3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit tfg3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfg3","type":"exact"},{"name":"TBP-associated factor 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP-associated factor 30 kDa (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription factor G 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIIF 30 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94436"}


id: GO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed cell death","secondary_identifiers":["GO:0043070"],"synonyms":[{"name":"regulation of non-apoptotic programmed cell death","type":"narrow"}],"termid":"GO:0043067"}


id: GO:0014812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a muscle cell from one site to another, often during the development of a multicellular organism.","definition_xrefs":["GOC:mtg_muscle","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell migration","termid":"GO:0014812"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: FYPO:0001228
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in vegetative growth phase of the life cycle, in which the amount of protein measured in the cell nucleus is higher than normal during a cellular response to hydrogen peroxide. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear protein level during vegetative growth","termid":"FYPO:0000255"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to hydrogen peroxide","termid":"FYPO:0001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased nuclear protein level during cellular response to hydrogen peroxide","synonyms":[{"name":"increased nuclear protein level during cellular response to H2O2","type":"exact"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased nuclear protein level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level in nucleus during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear accumulation of protein during cellular response to hydrogen peroxide","type":"exact"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"nuclear protein accumulation during cellular response to hydrogen peroxide during vegetative growth","type":"related"},{"name":"nuclear protein accumulation in response to hydrogen peroxide","type":"related"}],"termid":"FYPO:0001228"}


id: SO:1000103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000103 sequence_variant_decreasing_level_of_translation_product (obsolete SO:1000103)","synonyms":[{"name":"mutationdecreasing level of translation product","type":"related"},{"name":"sequence variant decreasing level of translation product","type":"exact"}],"termid":"SO:1000103"}


id: GO:1990322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIII) chains; type XXIII collagen triple helices span the plasma membrane.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type XXIII trimer","termid":"GO:1990322"}


id: PBO:0028211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutively_activated_MAPK_cascade_involved_in_cell_wall_organization_or_biogenesis","termid":"PBO:0028211"}


id: FYPO:0003713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to Skb1-containing lateral cortical nodes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to lateral cortical node","synonyms":[{"name":"abolished protein localisation to Skb1-containing cortical node","type":"exact"},{"name":"abolished protein localisation to lateral cortical node","type":"exact"},{"name":"abolished protein localization to lateral cortical node during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to lateral cortical node during vegetative growth","type":"exact"},{"name":"protein absent from lateral cortical node","type":"related"},{"name":"protein localization to lateral cortical node abolished","type":"exact"}],"termid":"FYPO:0003713"}


id: PBO:0082252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the translation initiation factor eIF2; eIF2 is involved in identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP; protein abundance increases in response to DNA replication stress","termid":"PBO:0082252"}


id: GO:0046196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrophenol metabolic process","termid":"GO:0018960"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"4-nitrophenol catabolic process","synonyms":[{"name":"4-nitrophenol breakdown","type":"exact"},{"name":"4-nitrophenol catabolism","type":"exact"},{"name":"4-nitrophenol degradation","type":"exact"}],"termid":"GO:0046196"}


id: FYPO:0004976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which depolymerization (i.e. removal of tubulin dimers) of microtubules extending in front of a moving spindle pole body occurs at a greater rate, or speed, than normal.","definition_xrefs":["PomBase:mah","PMID:16611238","GO:0036078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0003194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body","synonyms":[{"name":"decreased microtubule stability ahead of moving spindle pole body","type":"related"},{"name":"decreased stability of forwards-extending microtubules","type":"related"},{"name":"increased microtubule shrinkage ahead of moving spindle pole body","type":"related"},{"name":"increased rate of forward-extending microtubule depolymerization","type":"exact"},{"name":"increased rate of microtubule catastrophe ahead of moving spindle pole body","type":"related"},{"name":"increased rate of microtubule depolymerisation ahead of moving spindle pole body","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving SPB","type":"exact"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during mitotic cell cycle","type":"related"},{"name":"increased rate of microtubule depolymerization ahead of moving spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0004976"}


id: PBO:0089303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssb2-like","termid":"PBO:0089303"}


id: GO:1990129
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication restart after a stalled replication fork has been repaired.","definition_xrefs":["PMID:17139333","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication restart (obsolete GO:1990129)","synonyms":[{"name":"pre-primosome complex involved in replication restart","type":"exact"}],"termid":"GO:1990129"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70354,70872],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:15935758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear polyadenylation-dependent ncRNA catabolic process","termid":"GO:0071046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0016074"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


id: PBO:0074778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3K","termid":"PBO:0074778"}


id: GO:0052036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"perturbation by symbiont of host inflammatory response","termid":"GO:0052032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by symbiont of host inflammatory response","secondary_identifiers":["GO:0052260"],"synonyms":[{"name":"down regulation by symbiont of host inflammatory response","type":"exact"},{"name":"down-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"downregulation by symbiont of host inflammatory response","type":"exact"},{"name":"inhibition by symbiont of host inflammatory response","type":"narrow"},{"name":"negative regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052036"}


id: GO:0030527
data:
  {"annotated_genes":["SJAG_00302","SJAG_03543","SJAG_00336","SJAG_03047","SJAG_01873","SJAG_00303","SJAG_00307","SJAG_03941","SJAG_03942","SJAG_00335","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87448,97525,97865,107824,107825,107826,107863,107864,107865,112817,112825],"is_not":false,"summary":null,"term":"GO:0030527"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of chromatin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00303":null,"SJAG_00307":null,"SJAG_00335":null,"SJAG_00336":null,"SJAG_01873":null,"SJAG_03047":null,"SJAG_03542":null,"SJAG_03543":null,"SJAG_03941":null,"SJAG_03942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030527","terms_by_termid":{"GO:0030527":null}}


id: PBO:0059593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 5","termid":"PBO:0059593"}


id: GO:0060239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of signal transduction involved in conjugation with cellular fusion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060238"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"signal transduction involved in positive regulation of conjugation with cellular fusion","termid":"GO:0032005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060239"}


id: PBO:0091406
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC5L","termid":"PBO:0091406"}


id: PBO:0066893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 193","termid":"PBO:0066893"}


id: PBO:0081381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 222","termid":"PBO:0081381"}


id: PBO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD177 molecule","termid":"PBO:0042368"}


id: PBO:0052367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 15","termid":"PBO:0052367"}


id: PBO:0065265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 25","termid":"PBO:0065265"}


id: GO:1904038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of export of iron ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:kom","GOC:BHF","PMID:15514116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"regulates","term_name":"iron ion export across plasma membrane","termid":"GO:1903988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of iron export across plasma membrane","synonyms":[{"name":"regulation of ferrous iron export","type":"narrow"},{"name":"regulation of iron(2+) export","type":"narrow"}],"termid":"GO:1904038"}


id: GO:0030447
data:
  {"annotated_genes":["SJAG_00124","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114505,114506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"The process in which a multicellular organism, a unicellular organism or a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["PMID:11729141","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth","references_by_uniquename":{"PMID:34427722":null},"termid":"GO:0030447","terms_by_termid":{"GO:0030448":null}}


id: GO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein translocon complex at the chloroplast outer membrane.","definition_xrefs":["PMID:10646606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Toc complex","termid":"GO:0010006"}


id: PBO:0081987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 16","termid":"PBO:0081987"}


id: GO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050721","GO:0050705"],"synonyms":[{"name":"regulation of IL-1 alpha production","type":"exact"},{"name":"regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032650"}


id: PBO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement A. nidulans nimA","termid":"PBO:0016918"}


id: PBO:0073814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 16","termid":"PBO:0073814"}


id: GO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"epinephrine binding","synonyms":[{"name":"adrenaline binding","type":"exact"}],"termid":"GO:0051379"}


id: PBO:0061181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 11-1","termid":"PBO:0061181"}


id: PBO:0041334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 common eliminated region 1","termid":"PBO:0041334"}


id: GO:0017155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium:hydrogen antiporter regulator activity (obsolete GO:0017155)","synonyms":[{"name":"sodium:hydrogen antiporter regulator activity","type":"exact"},{"name":"sodium:proton antiporter regulator","type":"exact"}],"termid":"GO:0017155"}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMAC1 pseudogene 1","termid":"PBO:0045100"}


id: PBO:0066563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 2","termid":"PBO:0066563"}


id: PBO:0073710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 1","termid":"PBO:0073710"}


id: PBO:0025472
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microcephaly-capillary malformation syndrome (MICCAP)","termid":"PBO:0025472"}


id: FYPO:0007148
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to transplatin. Cells stop growing (and may die) at a concentration of transplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to transplatin","synonyms":[{"name":"hypersensitive to transplatin","type":"exact"},{"name":"sensitive to transplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to v during vegetative growth","type":"exact"}],"termid":"FYPO:0007148"}


id: PBO:0079052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 8-1","termid":"PBO:0079052"}


id: PBO:0084041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-glycan remodelase; conserved phosphoesterase domain-containing protein; acts together with Emp24p/Erv25p in cargo exit from the ER; functional ortholog of mammalian GPI-glycan remodelase PGAP5; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO)","termid":"PBO:0084041"}


id: PBO:0040132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASB16 antisense RNA 1","termid":"PBO:0040132"}


id: GO:0106112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0106111"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cohesin loading","termid":"GO:1905412"},{"relation_name":"negatively_regulates","term_name":"mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0062022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0106112"}


id: GO:0008063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Toll on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:19126860","GOC:go_curators","PMID:11135568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Toll signaling pathway","synonyms":[{"name":"Tl signaling pathway","type":"exact"},{"name":"Tl signalling pathway","type":"exact"},{"name":"Toll signalling pathway","type":"exact"}],"termid":"GO:0008063"}


id: GO:0070875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving glycogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glycogen metabolic process","termid":"GO:0070873"},{"relation_name":"positively_regulates","term_name":"glycogen metabolic process","termid":"GO:0005977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycogen metabolic process","synonyms":[{"name":"positive regulation of glycogen metabolism","type":"exact"}],"termid":"GO:0070875"}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: PBO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5","termid":"PBO:0045237"}


id: PBO:0072433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 7","termid":"PBO:0072433"}


id: GO:1904673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:19409607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of stem cell population maintenance","termid":"GO:1902455"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"negatively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of somatic stem cell population maintenance","synonyms":[{"name":"down regulation of somatic stem cell population maintenance","type":"exact"},{"name":"down-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"downregulation of somatic stem cell population maintenance","type":"exact"},{"name":"inhibition of somatic stem cell population maintenance","type":"narrow"}],"termid":"GO:1904673"}


id: PBO:0017572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Rad31","termid":"PBO:0017572"}


id: PBO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 5","termid":"PBO:0052568"}


id: PBO:0064448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan like 1","termid":"PBO:0064448"}


id: GO:1900361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentasaccharide transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of pentasaccharide transport","termid":"GO:1900360"},{"relation_name":"negatively_regulates","term_name":"pentasaccharide transport","termid":"GO:2001100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentasaccharide transport","synonyms":[{"name":"down regulation of pentasaccharide transport","type":"exact"},{"name":"down-regulation of pentasaccharide transport","type":"exact"},{"name":"downregulation of pentasaccharide transport","type":"exact"},{"name":"inhibition of pentasaccharide transport","type":"narrow"}],"termid":"GO:1900361"}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: FYPO:0005600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of one or more chromosomes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromosome morphology","termid":"FYPO:0005600"}


id: PBO:0064584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member E","termid":"PBO:0064584"}


id: PBO:0054273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1661","termid":"PBO:0054273"}


id: GO:0018273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-retinal-L-lysine.","definition_xrefs":["RESID:AA0120"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-retinal-L-lysine (obsolete GO:0018273)","termid":"GO:0018273"}


id: PR:O74526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase C70.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.05c","secondary_identifiers":["UniProtKB:O74526"],"synonyms":[{"name":"Spom972h-MYLK3","type":"exact"}],"termid":"PR:O74526"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dph","GOC:cls","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: PBO:0040386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit B1","termid":"PBO:0040386"}


id: GO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of a dorsal root ganglion cell that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C-fiber","synonyms":[{"name":"C-fibre","type":"exact"}],"termid":"GO:0044299"}


id: PBO:0087075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication","termid":"PBO:0087075"}


id: PBO:0089648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DUF3818 and PXA domain conserved fungal protein","termid":"PBO:0089648"}


id: GO:0043581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of the mycelium over time, from its formation to the mature structure. A mycelium consists of a mass of branching, thread-like hyphae.","definition_xrefs":["PMID:12832397","ISBN:1580085792","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mycelium development (obsolete GO:0043581)","termid":"GO:0043581"}


id: PBO:0013794
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinates updated from 3789585..3789948 to 3789400..3789948","termid":"PBO:0013794"}


id: FYPO:0003743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002060","FYPO:0005447","FYPO:0002057","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth during glucose starvation","synonyms":[{"name":"decreased cell population growth during glucose depletion","type":"exact"},{"name":"decreased cell population growth during glucose deprivation","type":"exact"},{"name":"decreased cell population growth during glucose limitation","type":"related"},{"name":"decreased cell population growth in response to glucose starvation","type":"exact"},{"name":"hypersensitive to glucose starvation","type":"related"},{"name":"reduced cell population growth during glucose starvation","type":"related"},{"name":"sensitive to glucose starvation","type":"related"},{"name":"slow cell population growth during glucose starvation","type":"narrow"}],"termid":"FYPO:0003743"}


id: GO:0098781
data:
  {"annotated_genes":["SJAG_01562","SJAG_00266","SJAG_02747","SJAG_03956","SJAG_04766","SJAG_00139","SJAG_04106","SJAG_02871","SJAG_02653","SJAG_04261","SJAG_04408","SJAG_01698","SJAG_01313","SJAG_02815","SJAG_00731","SJAG_00692","SJAG_05331","SJAG_01765","SJAG_01128","SJAG_01948","SJAG_03578","SJAG_03921","SJAG_00202","SJAG_03144","SJAG_01444","SJAG_02070","SJAG_02101"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[103321],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[78461,75133,77902,88794,90989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[87681,86094,109027,110687,105967,108367,101183,98127,85287,109428,108735,76735,100278,105088,108736,98767,90797,89529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"},{"annotations":[89531,75669,74749,78272,76037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The transcription of non (protein) coding RNA from a DNA template.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"ncRNA metabolic process","termid":"GO:0034660"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00266":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02747":null,"SJAG_02815":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03921":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"ncRNA transcription","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0098781","terms_by_termid":{"GO:0006362":null,"GO:0042790":null,"GO:0042791":null,"GO:0042797":null,"GO:0060195":null}}


id: GO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"CCL1 production","type":"exact"},{"name":"T cell activation 3 production","type":"exact"},{"name":"TCA-3 production","type":"exact"}],"termid":"GO:0071610"}


id: PBO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-Trna Accumulation","termid":"PBO:0002255"}


id: PBO:0059694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 2","termid":"PBO:0059694"}


id: PBO:0055541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2977","termid":"PBO:0055541"}


id: GO:1905836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triterpenoid stimulus.","definition_xrefs":["PMID:28078994","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triterpenoid","termid":"GO:1905836"}


id: PBO:0028341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0028341"}


id: PBO:0003144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiRNA sme2","termid":"PBO:0003144"}


id: PBO:0035730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation_during_vegetative_growth","termid":"PBO:0035730"}


id: GO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"}


id: PBO:0079689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 3","termid":"PBO:0079689"}


id: PR:P28876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pma2 gene.","definition_xrefs":["UniProtKB:P28876","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ATPase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.01c","synonyms":[{"name":"Spom972h-pma2","type":"exact"},{"name":"proton pump 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P28876"}


id: GO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v7 and protocadherin-gamma-a1, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-v7-protocadherin-gamma-a1 complex","synonyms":[{"name":"Pcdha7-Pcdhga1 complex","type":"narrow"}],"termid":"GO:0071188"}


id: GO:1901543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"negatively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"down regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"down-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"downregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"inhibition of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"inhibition of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"negative regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"negative regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901543"}


id: PBO:0084955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-transmembrane subunit of the DSC ubiquitin ligase complex; similar in sequence to rhomboid pseudoproteases Der1p and UBAC2 that function in ERAD; ortholog of fission yeast dsc2","termid":"PBO:0084955"}


id: GO:0033165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized extracellularc matrix that surrounds the photoreceptors of the retina and lies between them and the apical surface of the retinal pigment epithelium. The IPM has been implicated in several important activities required for photoreceptor function and maintenance.","definition_xrefs":["PMID:2194288","PMID:1862095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"interphotoreceptor matrix","termid":"GO:0033165"}


id: GO:0000783
data:
  {"annotated_genes":["SJAG_02194","SJAG_04245","SJAG_03685","SJAG_01864","SJAG_01378","SJAG_02362","SJAG_03092","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105656,109807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990879"},{"annotations":[100493,111102,85484,87488,90675,95210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070187"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere cap complex","termid":"GO:0000782"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01378":null,"SJAG_01777":null,"SJAG_01864":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03092":null,"SJAG_03685":null,"SJAG_04245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear telomere cap complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000783","terms_by_termid":{"GO:0070187":null,"GO:1990879":null}}


id: PBO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 5","termid":"PBO:0052491"}


id: GO:0141097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription activator activity regulated by binding to a ligand and that activates the transcription of specific genes and gene sets.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription activator activity","termid":"GO:0001216"},{"relation_name":"is_a","term_name":"ligand-activated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0001216"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0003700","GO:0001216"],"is_obsolete":false,"name":"ligand-activated transcription activator activity","termid":"GO:0141097"}


id: GO:0036285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a SAGA complex, a SAGA-type histone acetyltransferase complex that contains Spt8 (in budding yeast) or a homolog thereof.","definition_xrefs":["GOC:mah","PMID:10637607","PMID:22456315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"SAGA complex assembly","synonyms":[{"name":"SAGA complex formation","type":"exact"}],"termid":"GO:0036285"}


id: MOD:01441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, standard, encoded residue.","definition_xrefs":["PubMed:6692818","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue","termid":"MOD:01441"}


id: PBO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with similarity to globins; has a functional heme-binding domain; mutant has aneuploidy tolerance; transcription induced by stress conditions; may be involved in glucose signaling or metabolism; regulated by Rgt1","termid":"PBO:0086078"}


id: PBO:0083468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NOP58","termid":"PBO:0083468"}


id: PBO:0048470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCN1 activator of EIF2AK4","termid":"PBO:0048470"}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: GO:0033605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine secretion","synonyms":[{"name":"activation of catecholamine secretion","type":"narrow"},{"name":"stimulation of catecholamine secretion","type":"narrow"},{"name":"up regulation of catecholamine secretion","type":"exact"},{"name":"up-regulation of catecholamine secretion","type":"exact"},{"name":"upregulation of catecholamine secretion","type":"exact"}],"termid":"GO:0033605"}


id: PBO:0072846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 1","termid":"PBO:0072846"}


id: PBO:0064849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R14B antisense RNA 1","termid":"PBO:0064849"}


id: GO:0110118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of compound eye photoreceptor cell differentiation.","definition_xrefs":["GOC:ha","PMID:16377567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of photoreceptor cell differentiation","termid":"GO:0046533"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"negatively_regulates","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"}


id: PBO:0087981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; 5-methylates the uridine residue at position 54 of tRNAs and may also have a role in tRNA stabilization or maturation; endo-exonuclease with a role in DNA repair","termid":"PBO:0087981"}


id: GO:1900762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of averantin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"averantin metabolic process","termid":"GO:1900761"},{"relation_name":"is_a","term_name":"quinone catabolic process","termid":"GO:1901662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"averantin catabolic process","synonyms":[{"name":"averantin breakdown","type":"exact"},{"name":"averantin catabolism","type":"exact"},{"name":"averantin degradation","type":"exact"}],"termid":"GO:1900762"}


id: PBO:0081287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 71","termid":"PBO:0081287"}


id: GO:0034428
data:
  {"annotated_genes":["SJAG_05010","SJAG_05694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87208,105193],"is_not":false,"summary":null,"term":"GO:0034428"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process, exonucleolytic","termid":"GO:0000291"}],"gene_count":2,"genes_by_uniquename":{"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044248","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3'","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5'-3' exonucleolytic nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"GO:0034428","terms_by_termid":{"GO:0034428":null}}


id: PBO:0083012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deadenylation-dependent mRNA-decapping factor; also required for faithful chromosome transmission, maintenance of rDNA locus stability, and protection of mRNA 3'-UTRs from trimming; associated with topoisomerase II; binds to mRNAs under glucose starvation, most often in the 3' UTR; functionally linked to Pab1p; forms cytoplasmic foci upon DNA replication stress; phosphorylation by PKA inhibits P body foci formation","termid":"PBO:0083012"}


id: GO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. A digit is one of the terminal divisions of an appendage, such as a finger or toe.","definition_xrefs":["UBERON:0002544","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digit morphogenesis","termid":"GO:0042733"}


id: PBO:0061711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 6","termid":"PBO:0061711"}


id: GO:0015015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"part_of","term_name":"heparan sulfate proteoglycan biosynthetic process","termid":"GO:0015012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process, enzymatic modification","synonyms":[{"name":"heparan sulfate proteoglycan anabolism, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan formation, enzymatic modification","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis, enzymatic modification","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process, enzymatic modification","type":"exact"},{"name":"heparin proteoglycan biosynthetic process, enzymatic modification","type":"related"}],"termid":"GO:0015015"}


id: GO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin silencing process that results in the inhibition of RNA polymerase II-transcribed genes located in the vicinity of tRNA genes.","definition_xrefs":["PMID:30718362","PMID:23707796","PMID:30362930","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA locus-associated negative regulation of gene expression (obsolete GO:0061587)","synonyms":[{"name":"tDNA-mediated gene silencing","type":"exact"},{"name":"tRNA gene-mediated chromatin silencing","type":"exact"},{"name":"tRNA gene-mediated gene silencing","type":"exact"},{"name":"tgm silencing","type":"exact"},{"name":"transfer RNA gene-mediated chromatin silencing","type":"exact"},{"name":"transfer RNA gene-mediated gene silencing","type":"exact"},{"name":"transfer RNA gene-mediated silencinga","type":"exact"}],"termid":"GO:0061587"}


id: PBO:0054733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2142","termid":"PBO:0054733"}


id: PBO:0029480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_ester_level","termid":"PBO:0029480"}


id: PR:O74346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P cell-type agglutination protein map4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.06c","synonyms":[{"name":"Spom972h-map4","type":"exact"}],"termid":"PR:O74346"}


id: PBO:0087211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase; subunit of complex with Trm112p that methylates translation release factor Sup45p (eRF1) in the ternary complex eRF1-eRF3-GTP; similar to E.coli PrmC; member of the seven beta-strand family","termid":"PBO:0087211"}


id: PBO:0030293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-glossy_colony_morphology","termid":"PBO:0030293"}


id: PBO:0079700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubinuclein 1","termid":"PBO:0079700"}


id: PBO:0043228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin like cytokine factor 1","termid":"PBO:0043228"}


id: PBO:0054235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1617","termid":"PBO:0054235"}


id: PBO:0027208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_heterochromatin_during_meiosis","termid":"PBO:0027208"}


id: GO:0051931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception, the series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception","termid":"GO:0051931"}


id: PATO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved around an axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotational curvature","termid":"PATO:0001787"}


id: GO:0050517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate, and ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown).","definition_xrefs":["EC:2.7.4.21","MetaCyc:2.7.4.21-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol hexakisphosphate kinase activity (obsolete GO:0050517)","synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"related"},{"name":"ATP:1D-myo-inositol-hexakisphosphate phosphotransferase activity","type":"related"},{"name":"inositol hexakisphosphate kinase activity","type":"exact"},{"name":"inositol-hexakisphosphate kinase activity","type":"exact"}],"termid":"GO:0050517"}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PMID:12654901","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"}],"termid":"FYPO:0001972"}


id: PBO:0062460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 145 pseudogene","termid":"PBO:0062460"}


id: PBO:0069062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 309, pseudogene","termid":"PBO:0069062"}


id: PBO:0049102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR158 antisense RNA 1","termid":"PBO:0049102"}


id: PBO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70A","termid":"PBO:0050986"}


id: GO:0080007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione N-hydroxysulfenamide + NADH + H+ = S-nitrosoglutathione + NAD+.","definition_xrefs":["PMID:11260719","PMID:27094420","PMID:30795534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"},{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase activity","termid":"GO:0051903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase activity","termid":"GO:0080007"}


id: FYPO:0003843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division during which chromosomes segregate unequally, and then dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000004","FYPO:0005447","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"inviable following spore germination, single cell division, unequal chromosome segregation","synonyms":[{"name":"inviable germinated spore, single cell division, unequal chromosome segregation","type":"exact"},{"name":"lethal; following spore germination, single cell division, unequal chromosome segregation","type":"exact"}],"termid":"FYPO:0003843"}


id: PBO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 1","termid":"PBO:0043552"}


id: GO:1900956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900956"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:23496142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: GO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells into the embryo involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ingression involved in gastrulation with mouth forming second","termid":"GO:0055111"}


id: PBO:0075143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptides B and B1 pseudogene 1","termid":"PBO:0075143"}


id: PATO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrally rotated","termid":"PATO:0001659"}


id: GO:2001090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotriuloseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"maltotriulose transport","termid":"GO:2001090"}


id: GO:1990956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a fibroblast guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:8760137","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast chemotaxis","termid":"GO:1990956"}


id: FYPO:0004079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone phosphorylation during vegetative growth","termid":"FYPO:0002595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"normal histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"normal histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004079"}


id: GO:2000038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal complex development","termid":"GO:2000038"}


id: PBO:0049358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 16","termid":"PBO:0049358"}


id: PBO:0057626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1200","termid":"PBO:0057626"}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: PBO:0013100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein Lrp1","termid":"PBO:0013100"}


id: GO:0100042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates pseudohyphal growth.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter (obsolete GO:0100042)","termid":"GO:0100042"}


id: GO:0032447
data:
  {"annotated_genes":["SJAG_03896","SJAG_01302","SJAG_03616","SJAG_03932"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70764,74025,101246,103745],"is_not":false,"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"Covalent attachment of the ubiquitin-like protein URM1 to another protein.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01302":null,"SJAG_03616":null,"SJAG_03896":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein urmylation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0032447","terms_by_termid":{"GO:0032447":null}}


id: GO:0022033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of microglial cells through the telencephalon.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon glial cell migration","termid":"GO:0022030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon microglial cell migration","termid":"GO:0022033"}


id: PBO:0078357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 3-1","termid":"PBO:0078357"}


id: GO:1903872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:18347097","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903872"}


id: GO:0071895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of neural crest origin acquires the specialized features of an odontoblast, a cell on the outer surface of the dental pulp whose biological function is the creation of dentin.","definition_xrefs":["PMID:20425127","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"odontoblast differentiation","termid":"GO:0071895"}


id: PBO:0028175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mating_type_switching_resulting_in_duplication_or_deletion_in_mating-type_region","termid":"PBO:0028175"}


id: GO:0034401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any cellular process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin that modulates the rate, frequency or extent of DNA-dependent transcription.","definition_xrefs":["PMID:21102443","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin organization involved in regulation of transcription (obsolete GO:0034401)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"establishment or maintenance of chromatin architecture during transcription","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"positive regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"regulation of global transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription by chromatin organisation","type":"exact"},{"name":"regulation of transcription by chromatin organization","type":"exact"},{"name":"regulation of transcription from Pol II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, global by histone modification","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up regulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"up-regulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"upregulation of global transcription from RNA polymerase II promoter by histone modification","type":"narrow"},{"name":"upregulation of transcription from RNA polymerase II promoter by histone modification","type":"narrow"}],"termid":"GO:0034401"}


id: PBO:0011462
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.958","termid":"PBO:0011462"}


id: PBO:0075931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST14 transmembrane serine protease matriptase","termid":"PBO:0075931"}


id: GO:0033238
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amine metabolism","type":"exact"},{"name":"regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033238","terms_by_termid":{"GO:0010967":null}}


id: PBO:0055354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2783","termid":"PBO:0055354"}


id: PBO:0073289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 11","termid":"PBO:0073289"}


id: GO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the population in the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in kidney development","termid":"GO:0072111"}


id: GO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"arachidonate transport","termid":"GO:1903963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"arachidonic acid secretion","termid":"GO:0050482"}


id: PBO:0069629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 906, pseudogene","termid":"PBO:0069629"}


id: PR:Q92351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcp1 gene.","definition_xrefs":["UniProtKB:Q92351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein pcp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.06c","synonyms":[{"name":"Spom972h-pcp1","type":"exact"}],"termid":"PR:Q92351"}


id: PBO:0067769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 69","termid":"PBO:0067769"}


id: PBO:0003517
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Missegregation and Lethal when Overexpressed","termid":"PBO:0003517"}


id: PBO:0004482
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.-.-","termid":"PBO:0004482"}


id: GO:1901939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-exo-alpha-bergamotene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"(-)-exo-alpha-bergamotene metabolic process","termid":"GO:1901938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene catabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene breakdown","type":"exact"},{"name":"(-)-exo-alpha-bergamotene catabolism","type":"exact"},{"name":"(-)-exo-alpha-bergamotene degradation","type":"exact"}],"termid":"GO:1901939"}


id: PBO:0077788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III beta","termid":"PBO:0077788"}


id: PBO:0045218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene","termid":"PBO:0045218"}


id: GO:0004411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate + H+.","definition_xrefs":["EC:1.13.11.5","RHEA:15449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homogentisate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:HOMOGENTISATE-12-DIOXYGENASE-RXN","UM-BBD_reactionID:r0105","Reactome:R-HSA-71164","KEGG_REACTION:R02519"],"synonyms":[{"name":"homogentisate dioxygenase activity","type":"related"},{"name":"homogentisate oxidase activity","type":"related"},{"name":"homogentisate oxygenase activity","type":"related"},{"name":"homogentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"homogentisic acid oxidase activity","type":"related"},{"name":"homogentisic acid oxygenase activity","type":"related"},{"name":"homogentisic oxygenase activity","type":"related"},{"name":"homogentisicase activity","type":"related"}],"termid":"GO:0004411"}


id: PBO:0012042
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae fen2","termid":"PBO:0012042"}


id: GO:0001899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis by symbiont of host cells (obsolete GO:0001899)","synonyms":[{"name":"down regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"down-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"downregulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"inhibition by symbiont of cytolysis of host cells","type":"narrow"},{"name":"negative regulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001899"}


id: GO:0006091
data:
  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chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic 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of precursor metabolites and energy","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"energy pathways","type":"broad"},{"name":"intermediary metabolism","type":"related"},{"name":"metabolic energy generation","type":"related"}],"termid":"GO:0006091","terms_by_termid":{"GO:0005978":null,"GO:0005980":null,"GO:0006069":null,"GO:0006091":null,"GO:0006099":null,"GO:0006112":null,"GO:0006119":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0006740":null,"GO:0009051":null,"GO:0009052":null,"GO:0009060":null,"GO:0019655":null,"GO:0019660":null,"GO:0022900":null,"GO:0042776":null,"GO:0043456":null,"GO:0043490":null,"GO:0045719":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0140647":null,"GO:1903715":null,"GO:1905857":null,"GO:2001172":null}}


id: PBO:0072117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 6","termid":"PBO:0072117"}


id: SO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcription factor binding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region_translocation","termid":"SO:0001884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFBS_translocation","synonyms":[{"name":"TFBS binding site translocation","type":"exact"},{"name":"transcription factor binding site translocation","type":"exact"}],"termid":"SO:0001885"}


id: PBO:0066995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 298","termid":"PBO:0066995"}


id: GO:0103105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + a standard alpha amino acid = dihomomethionine + a 2-oxo carboxylate.","definition_xrefs":["EC:2.6.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"2-oxo-6-methylthiohexanoate aminotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4345"],"termid":"GO:0103105"}


id: FYPO:0005007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005007)","synonyms":[{"name":"normal peptidyl-serine phosphorylation at RxxS site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"normal protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"normal protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"}],"termid":"FYPO:0005007"}


id: GO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting oxygen tension in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host oxygen tension environment","synonyms":[{"name":"response of symbiont to host oxygen tension environment","type":"exact"}],"termid":"GO:0075138"}


id: PBO:0049188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL3 antisense RNA 1","termid":"PBO:0049188"}


id: PBO:0065651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type D","termid":"PBO:0065651"}


id: GO:0106212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which centromeres dissociate from the spindle pole body, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"centromere detachment from spindle pole body involved in meiotic chromosome organization","synonyms":[{"name":"centromere detachment from SPB involved in meiotic chromosome organization","type":"exact"},{"name":"centromere detachment from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106212"}


id: PR:P59289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3703 gene.","definition_xrefs":["UniProtKB:P59289","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.05","synonyms":[{"name":"L37-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3703","type":"exact"}],"termid":"PR:P59289"}


id: PBO:0039802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1","termid":"PBO:0039802"}


id: PBO:0057653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245b","termid":"PBO:0057653"}


id: SO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GC dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000924 insert_GC (obsolete SO:0000924)","synonyms":[{"name":"insert GC","type":"exact"}],"termid":"SO:0000924"}


id: GO:0046270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-toluenecarboxylate biosynthetic process (obsolete GO:0046270)","synonyms":[{"name":"4-toluenecarboxylate anabolism","type":"exact"},{"name":"4-toluenecarboxylate biosynthesis","type":"exact"},{"name":"4-toluenecarboxylate biosynthetic process","type":"exact"},{"name":"4-toluenecarboxylate formation","type":"exact"},{"name":"4-toluenecarboxylate synthesis","type":"exact"}],"termid":"GO:0046270"}


id: PBO:0070718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 23","termid":"PBO:0070718"}


id: PBO:0081963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida like domain containing 1","termid":"PBO:0081963"}


id: GO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through alternate splicing.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:16166509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"}


id: PBO:0030049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ferric-chelate_reductase_activity","termid":"PBO:0030049"}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["PMID:26076903","PMID:23708524","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"lipophagy","termid":"GO:0061724"}


id: GO:2000976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in detection of glucose.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in detection of glucose (obsolete GO:2000976)","synonyms":[{"name":"global transcription regulation from Pol II promoter involved in detection of glucose","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose detection","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose perception","type":"related"},{"name":"global transcription regulation from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in detection of glucose","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose detection","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in detection of glucose","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose detection","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of global transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in detection of glucose","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from Pol II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from Pol II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose detection","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter involved in glucose sensing","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in detection of glucose","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose detection","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose perception","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global involved in glucose sensing","type":"related"}],"termid":"GO:2000976"}


id: PBO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human RNF family homolog","termid":"PBO:0001019"}


id: GO:1904580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["PMID:21471000","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular mRNA localization","synonyms":[{"name":"regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"regulation of intracellular mRNA localisation","type":"exact"},{"name":"regulation of intracellular mRNA positioning","type":"narrow"},{"name":"regulation of mRNA localization, intracellular","type":"exact"},{"name":"regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904580"}


id: FYPO:0001416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfide:quinone oxidoreductase activity","termid":"FYPO:0001415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased sulfide:quinone oxidoreductase activity","synonyms":[{"name":"decreased sulfide-quinone reductase activity","type":"exact"},{"name":"decreased sulfide:quinone reductase activity","type":"exact"},{"name":"decreased sulphide:quinone oxidoreductase activity","type":"exact"},{"name":"reduced sulfide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001416"}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: PBO:0085352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; induced by glucose starvation that protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; glutathione peroxidase activity is neuroprotective in models of Huntington's disease; GPX1 has a paralog, HYR1, that arose from the whole genome duplication","termid":"PBO:0085352"}


id: PBO:0057061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 145","termid":"PBO:0057061"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["EC:6.3.2.26","RHEA:23196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["MetaCyc:6.3.2.26-RXN","KEGG_REACTION:R04870"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"}],"termid":"GO:0050564"}


id: GO:1903797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["PMID:11336802","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"positively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inorganic anion transmembrane transport","synonyms":[{"name":"activation of inorganic anion membrane transport","type":"narrow"},{"name":"activation of inorganic anion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane inorganic anion transport","type":"narrow"},{"name":"positive regulation of inorganic anion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up regulation of inorganic anion membrane transport","type":"exact"},{"name":"up regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up-regulation of inorganic anion membrane transport","type":"exact"},{"name":"up-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"upregulation of inorganic anion membrane transport","type":"exact"},{"name":"upregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903797"}


id: _global:singly_occurring_form_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"singly_occurring_form_of","synonyms":[{"name":"monadic_form_of","type":"exact"}],"termid":"_global:singly_occurring_form_of"}


id: GO:1901968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polynucleotide 3'-phosphatase activity","synonyms":[{"name":"regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901968"}


id: GO:0004958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with prostaglandin F (PGF (2-alpha)) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin receptor activity","termid":"GO:0004955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"prostaglandin F receptor activity","synonyms":[{"name":"PGF receptor activity","type":"related"},{"name":"PGF(2-alpha) receptor activity","type":"exact"}],"termid":"GO:0004958"}


id: GO:0006351
data:
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id: PBO:0028056
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id: PBO:0058219
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id: PBO:0001867
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id: PBO:0081879
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id: SO:0000901
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id: FYPO:0004936
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id: GO:0050119
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id: PR:Q9UT08
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id: PBO:0083875
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id: GO:1990907
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id: FYPO:0007017
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id: GO:0000126
data:
  {"annotated_genes":["SJAG_03007","SJAG_03120","SJAG_00421"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71871,76639,91160],"is_not":false,"summary":null,"term":"GO:0000126"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF.","definition_xrefs":["GOC:mah","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03007":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIB complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000126","terms_by_termid":{"GO:0000126":null}}


id: PBO:0057964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3685","termid":"PBO:0057964"}


id: FYPO:0002210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, tapered cells (obsolete FYPO:0002210)","synonyms":[{"name":"inviable microcolony, bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002210"}


id: PBO:0045870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 3","termid":"PBO:0045870"}


id: GO:0080075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a feruloyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"spermidine:feruloyl CoA N-acyltransferase activity","termid":"GO:0080075"}


id: PBO:0089824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 GEF Efc25","termid":"PBO:0089824"}


id: PBO:0067020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 33, pseudogene","termid":"PBO:0067020"}


id: GO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N(6)-succinyl-L-lysyl-[protein] + NAD+ = 2''-O-succinyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["GOC:sp","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"protein-succinyllysine desuccinylase activity","secondary_identifiers":["RHEA:47668"],"synonyms":[{"name":"peptidyl-succinyllysine desuccinylase activity","type":"exact"},{"name":"succinyl lysine desuccinylase activity","type":"broad"},{"name":"succinyllysine desuccinylase activity","type":"broad"}],"termid":"GO:0036055"}


id: PR:O14135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.09","synonyms":[{"name":"Spom972h-set8","type":"exact"}],"termid":"PR:O14135"}


id: PBO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NECAP endocytosis associated 1 pseudogene 2","termid":"PBO:0060821"}


id: GO:0047856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydrocoumarin + H2O = 3-(2-hydroxyphenyl)propanoate + H+.","definition_xrefs":["RHEA:10360","EC:3.1.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dihydrocoumarin hydrolase activity","secondary_identifiers":["MetaCyc:DIHYDROCOUMARIN-LIPASE-RXN","KEGG_REACTION:R03692"],"synonyms":[{"name":"dihydrocoumarin lactonohydrolase activity","type":"related"},{"name":"dihydrocoumarin lipase activity","type":"exact"}],"termid":"GO:0047856"}


id: SO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The polypeptide sequence that remains when the cleaved peptide regions have been cleaved from the immature peptide.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mature_protein_region_of_CDS","termid":"SO:0002249"},{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"},{"relation_name":"part_of","term_name":"immature_peptide_region","termid":"SO:0001063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mature_protein_region","secondary_identifiers":["BS:00149"],"synonyms":[{"name":"INSDC_feature:mat_peptide","type":"exact"},{"name":"chain","type":"related"},{"name":"mature peptide","type":"related"},{"name":"mature protein region","type":"exact"}],"termid":"SO:0000419"}


id: PBO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.70","termid":"PBO:0004474"}


id: PBO:0049085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 141","termid":"PBO:0049085"}


id: MOD:00397
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with iodoacetamide, usually replacement of a reactive hydrogen with a methylcarboxamido group.","definition_xrefs":["PubMed:11327326","Unimod:4","PubMed:12422359","PubMed:11510821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodoacetamide derivatized residue","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:00397"}


id: PBO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product was previously annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. This mapping was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034793"}


id: PBO:0072515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 44","termid":"PBO:0072515"}


id: FYPO:0000715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to K-252a. Cells stop growing (and may die) at a concentration of K-252a that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to K-252a","synonyms":[{"name":"hypersensitive to K-252a","type":"exact"},{"name":"sensitive to K-252a during mitotic cell cycle","type":"related"},{"name":"sensitive to K-252a during vegetative growth","type":"exact"}],"termid":"FYPO:0000715"}


id: PR:O94662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C651.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.04","synonyms":[{"name":"Spom972h-SPBC651.04","type":"exact"}],"termid":"PR:O94662"}


id: GO:0036271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylphenidate stimulus.","definition_xrefs":["GOC:hp","Wikipedia:Methylphenidate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methylphenidate","synonyms":[{"name":"response to MPD","type":"exact"},{"name":"response to MPH","type":"exact"},{"name":"response to ritalin","type":"exact"}],"termid":"GO:0036271"}


id: GO:0030304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase trypsin.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete trypsin inhibitor activity (obsolete GO:0030304)","synonyms":[{"name":"trypsin inhibitor activity","type":"exact"}],"termid":"GO:0030304"}


id: PBO:0064185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLA2G10 pseudogene 1","termid":"PBO:0064185"}


id: GO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: nucleoside 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity","synonyms":[{"name":"calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity","type":"broad"},{"name":"calcium- and calmodulin-regulated cGMP phosphodiesterase activity","type":"related"},{"name":"calcium- and calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"},{"name":"calcium- and calmodulin-regulated cyclic-GMP phosphodiesterase activity","type":"exact"},{"name":"calcium/calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0048101"}


id: GO:0140863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin molecule to histone 2A at the lysine-127 residue.","definition_xrefs":["PMID:28624371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0004842","GO:0016740","GO:0019787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H2AK127 ubiquitin ligase activity","synonyms":[{"name":"histone H2A-K127 ubiquitin ligase activity","type":"exact"},{"name":"histone ubiquitin ligase activity (H2A-K127 specific)","type":"exact"}],"termid":"GO:0140863"}


id: GO:0055088
data:
  {"annotated_genes":["SJAG_04317","SJAG_01912","SJAG_02064","SJAG_04323","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70968,73748,96079],"is_not":false,"summary":null,"term":"GO:0055088"},{"annotations":[88664,98941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055091"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of lipid within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01912":null,"SJAG_02064":null,"SJAG_04317":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid homeostasis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0055088","terms_by_termid":{"GO:0055088":null,"GO:0055091":null}}


id: PBO:0029010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029010"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:bc","GOC:jl","ISBN:0198506732","GOC:aruk","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: GO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein ubiquitination","termid":"GO:0031396"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein ubiquitination","termid":"GO:0016567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein ubiquitination","synonyms":[{"name":"activation of protein ubiquitination","type":"narrow"},{"name":"stimulation of protein ubiquitination","type":"narrow"},{"name":"up regulation of protein ubiquitination","type":"exact"},{"name":"up-regulation of protein ubiquitination","type":"exact"},{"name":"upregulation of protein ubiquitination","type":"exact"}],"termid":"GO:0031398"}


id: PBO:0091179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermembrane lipid transfer protein, chorein family Vps1302","termid":"PBO:0091179"}


id: PBO:0044466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily Z member 1","termid":"PBO:0044466"}


id: GO:0010893
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"positively_regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010893","terms_by_termid":{"GO:0070452":null}}


id: PBO:0059475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin","termid":"PBO:0059475"}


id: PATO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000391 intense (obsolete PATO:0000391)","termid":"PATO:0000391"}


id: GO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss.","definition_xrefs":["PMID:10208444","MSH:D017209","PMID:11909981","PMID:15905876","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroprotection (obsolete GO:0043526)","secondary_identifiers":["Wikipedia:Neuroprotection"],"synonyms":[{"name":"neuroprotection","type":"exact"}],"termid":"GO:0043526"}


id: GO:0016407
data:
  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id: PBO:0073961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 10","termid":"PBO:0073961"}


id: PATO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being turned inward upon itself.","definition_xrefs":["die.net:die.net"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introverted","termid":"PATO:0001856"}


id: GO:0010214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the seed coat over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed coat development","termid":"GO:0010214"}


id: FYPO:0001801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A viability phenotype in which a cell is unable to survive at a high temperature at which wild-type cells survive.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable cell at high temperature (obsolete FYPO:0001801)","synonyms":[{"name":"lethal in cell at high temperature","type":"exact"}],"termid":"FYPO:0001801"}


id: GO:0106437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic reaction: ATP + L-glutamate + L-glutamyl-[protein] = ADP + H(+) + L-gamma-glutamyl-L-glutamyl-[protein] + phosphate.","definition_xrefs":["Rhea:60144","PMID:32747782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity, initiating","termid":"GO:0106437"}


id: PBO:0034149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-child_nucleus_of","termid":"PBO:0034149"}


id: GO:1905258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to nitrosative stress.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf","PMID:14752510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","termid":"GO:1990442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway in response to nitrosative stress","type":"exact"},{"name":"regulation of nitrosative stress-induced apoptosis","type":"related"}],"termid":"GO:1905258"}


id: PBO:0042339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD72 molecule","termid":"PBO:0042339"}


id: GO:0035661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 2 receptor where the MyD88 adaptor molecule mediates transduction of the signal. Toll-like 2 receptors are pattern recognition receptors that bind microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:20385024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"},{"relation_name":"is_a","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor 2 signaling pathway","synonyms":[{"name":"MyD88-dependent TLR2 signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0035661"}


id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["EC:2.7.2.6","RHEA:16009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["KEGG_REACTION:R00518","MetaCyc:FORMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: GO:0097633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of phagophore assembly site membrane (obsolete GO:0097633)","synonyms":[{"name":"intrinsic to phagophore assembly site membrane","type":"narrow"}],"termid":"GO:0097633"}


id: PBO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 46 pseudogene","termid":"PBO:0062096"}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:mtg_sensu","PMID:4338436","GOC:kp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: PBO:0046696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS proto-oncogene 1, transcription factor","termid":"PBO:0046696"}


id: PBO:0059770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 44","termid":"PBO:0059770"}


id: PBO:0043622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage oligomeric matrix protein","termid":"PBO:0043622"}


id: PBO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 28","termid":"PBO:0080042"}


id: PBO:0029909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_terbinafine","termid":"PBO:0029909"}


id: PBO:0053817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1078","termid":"PBO:0053817"}


id: GO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + benzoyl-CoA = 4 CoA + 3,5-dihydroxybiphenyl + 4 CO2.","definition_xrefs":["EC:2.3.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"biphenyl synthase activity","secondary_identifiers":["RHEA:22292","MetaCyc:2.3.1.177-RXN"],"synonyms":[{"name":"BIS","type":"related"},{"name":"malonyl-CoA:benzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0033815"}


id: PBO:0054366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1760","termid":"PBO:0054366"}


id: GO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:bf","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"},{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen pH elevation","synonyms":[{"name":"lysosome pH elevation","type":"exact"}],"termid":"GO:0035752"}


id: FYECO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cd ions","synonyms":[{"name":"cadmium ions added","type":"exact"}],"termid":"FYECO:0000033"}


id: PBO:0053214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9D, pseudogene","termid":"PBO:0053214"}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: PBO:0072792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 2","termid":"PBO:0072792"}


id: PBO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GDP_binding","termid":"PBO:0030534"}


id: GO:1903619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transdifferentiation.","definition_xrefs":["PMID:22118091","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of transdifferentiation","termid":"GO:1903618"},{"relation_name":"negatively_regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transdifferentiation","synonyms":[{"name":"down regulation of transdifferentiation","type":"exact"},{"name":"down-regulation of transdifferentiation","type":"exact"},{"name":"downregulation of transdifferentiation","type":"exact"},{"name":"inhibition of transdifferentiation","type":"narrow"}],"termid":"GO:1903619"}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: GO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions within the cell that occur as a result of a single trigger reaction or compound interacting with a chemoreceptor resulting in a modulation of the force with which blood travels through the circulatory system. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of blood pressure by chemoreceptor signaling pathway","synonyms":[{"name":"regulation of blood pressure by chemoreceptor signalling pathway","type":"exact"}],"termid":"GO:0010850"}


id: PBO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrosin","termid":"PBO:0047346"}


id: PBO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt3p, can instead interact with Pmt2p in some conditions; target for new antifungals","termid":"PBO:0086082"}


id: PBO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, centromeric (predicted)","termid":"PBO:0002216"}


id: GO:1905651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of artery morphogenesis.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","PMID:27389411","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of artery morphogenesis","synonyms":[{"name":"regulation of arterial morphogenesis","type":"exact"},{"name":"regulation of arteriogenesis","type":"exact"}],"termid":"GO:1905651"}


id: FYPO:0005149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"septated spheroid vegetative cell","synonyms":[{"name":"septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0005149"}


id: GO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-N6,N6,N6-trimethyl-L-lysine to form peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine hydroxylation","termid":"GO:0017185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-N6,N6,N6-trimethyl-lysine hydroxylation to peptidyl-N6,N6,N6-trimethyl-5-hydroxy-L-lysine","synonyms":[{"name":"peptidyl trimethyl lysine hydroxylase activity","type":"exact"},{"name":"peptidyl-trimethyl-lysine hydroxylase activity","type":"exact"}],"termid":"GO:0050841"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: GO:0008097
data:
  {"annotated_genes":["SJAG_01568","SJAG_04066","SJAG_00067","SJAG_00323"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71201,72026,72248,84672],"is_not":false,"summary":null,"term":"GO:0008097"}]},"cv_name":"molecular_function","definition":"Binding to a 5S ribosomal RNA, the smallest RNA constituent of a ribosome.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00323":null,"SJAG_01568":null,"SJAG_04066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"5S rRNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0008097","terms_by_termid":{"GO:0008097":null}}


id: PBO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 40","termid":"PBO:0061380"}


id: PBO:0059396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S30","termid":"PBO:0059396"}


id: PBO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 1","termid":"PBO:0042947"}


id: PBO:0049367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2","termid":"PBO:0049367"}


id: PBO:0049270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSG1 like","termid":"PBO:0049270"}


id: GO:0000035
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74984],"is_not":false,"summary":null,"term":"GO:0000035"}]},"cv_name":"molecular_function","definition":"Binding to an acyl group, any group formally derived by removal of the hydroxyl group from the acid function of a carboxylic acid.","definition_xrefs":["GOC:curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acyl binding","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"acyl-CoA or acyl binding","type":"broad"}],"termid":"GO:0000035","terms_by_termid":{"GO:0000035":null}}


id: GO:0030132
data:
  {"annotated_genes":["SJAG_02805","SJAG_01167","SJAG_00800","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77185,73820,106851,103667],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin-coated pit","termid":"GO:0005905"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"clathrin coat of coated pit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0030132","terms_by_termid":{"GO:0030122":null}}


id: GO:0009305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of biotin (vitamin B7 / vitamin H) to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biotinylation (obsolete GO:0009305)","synonyms":[{"name":"protein amino acid biotinylation","type":"exact"}],"termid":"GO:0009305"}


id: PBO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly","termid":"PBO:0031860"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0039952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C","termid":"PBO:0039952"}


id: PBO:0050877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopentenyl-diphosphate delta isomerase 1","termid":"PBO:0050877"}


id: GO:0019650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose into butanediol; effected by some members of the Enterobacteriaceae, e.g. Enterobacter, Erwinia, Klebsiella, and Serratia.","definition_xrefs":["ISBN:0198506732","GOC:dph","GOC:nr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"},{"relation_name":"is_a","term_name":"butanediol metabolic process","termid":"GO:0034077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation to butanediol","secondary_identifiers":["Wikipedia:Butanediol_fermentation","MetaCyc:P125-PWY","GO:0030646"],"synonyms":[{"name":"butanediol fermentation","type":"exact"},{"name":"glucose catabolic process to butanediol","type":"exact"},{"name":"glucose fermentation to butanediol","type":"exact"}],"termid":"GO:0019650"}


id: PBO:0060383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin transcription factor 1","termid":"PBO:0060383"}


id: FYPO:0007330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to formaldehyde. Cells stop growing (and may die) at a concentration of formaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to formaldehyde","synonyms":[{"name":"hypersensitive to formaldehyde","type":"exact"},{"name":"sensitive to formaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to formaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0007330"}


id: PBO:0071534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35","termid":"PBO:0071534"}


id: PBO:0077336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM72 antisense RNA 1","termid":"PBO:0077336"}


id: PBO:0079153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 13","termid":"PBO:0079153"}


id: PBO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit MrpS12 (predicted)","termid":"PBO:0017665"}


id: GO:0006566
data:
  {"annotated_genes":["SJAG_03692","SJAG_00432","SJAG_00830","SJAG_03141","SJAG_03152","SJAG_00881","SJAG_02450","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101384,76127,105956,107225,75307,67936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[76685,72006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"threonine metabolic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"threonine metabolism","type":"exact"}],"termid":"GO:0006566","terms_by_termid":{"GO:0006567":null,"GO:0009088":null}}


id: GO:1990162
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99625],"is_not":false,"summary":null,"term":"GO:1990162"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 4) + H2O = histone H3 L-lysine (position 4) + acetate. This reaction represents the removal of an acetyl group from lysine at position 4 of the histone H3 protein.","definition_xrefs":["PMID:23771057","PMID:28450737","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0019213","GO:0003674","GO:0016810","GO:0033558","GO:0016787"],"is_obsolete":false,"name":"histone H3K4 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K4 deacetylase activity","type":"exact"},{"name":"histone deacetylase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:1990162","terms_by_termid":{"GO:1990162":null}}


id: GO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing TBK1 (TANK-binding kinase 1), IKBKE (I-Kappa-B kinase epsilon/IKKE/IKK-epsilon) and the DEAD box family RNA helicase DDX3.","definition_xrefs":["VZ:719","PMID:18636090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TBK1-IKKE-DDX3 complex","synonyms":[{"name":"TBK1-IKBKE-DDX3 complex","type":"exact"}],"termid":"GO:0039658"}


id: PBO:0083777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits","termid":"PBO:0083777"}


id: PR:O14284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug63 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation resistance protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.16c","synonyms":[{"name":"Spom972h-mug63","type":"exact"},{"name":"meiotically up-regulated gene 63 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14284"}


id: PBO:0091308
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAB6A","termid":"PBO:0091308"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["UniProtKB:Q92358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: PR:Q9UUH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug58 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase mug58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.09c","synonyms":[{"name":"Spom972h-mug58","type":"exact"},{"name":"meiotically up-regulated gene 58 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUH3"}


id: PBO:0070660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 31","termid":"PBO:0070660"}


id: GO:0016806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of N-terminal di- or tripeptides from a polypeptide chain.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase and tripeptidyl-peptidase activity (obsolete GO:0016806)","secondary_identifiers":["EC:3.4.14.-"],"synonyms":[{"name":"dipeptidyl-peptidase and tripeptidyl-peptidase activity","type":"exact"}],"termid":"GO:0016806"}


id: PATO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001105 absolute strain value (obsolete PATO:0001105)","termid":"PATO:0001105"}


id: PBO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi1 (predicted)","termid":"PBO:0002312"}


id: PATO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001213 mass_unit (obsolete PATO:0001213)","termid":"PATO:0001213"}


id: GO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a nitric-oxide synthase enzyme.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase biosynthetic process","termid":"GO:0051769"},{"relation_name":"negatively_regulates","term_name":"nitric-oxide synthase biosynthetic process","termid":"GO:0051767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nitric-oxide synthase biosynthetic process","secondary_identifiers":["GO:0051774"],"synonyms":[{"name":"down regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"down-regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"down-regulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"downregulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"downregulation of nitric-oxide synthase biosynthetic process","type":"exact"},{"name":"inhibition of nitric-oxide synthase 2 biosynthetic process","type":"narrow"},{"name":"inhibition of nitric-oxide synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of NO synthase biosynthesis","type":"exact"},{"name":"negative regulation of NO synthase biosynthetic process","type":"exact"},{"name":"negative regulation of NOS biosynthesis","type":"exact"},{"name":"negative regulation of NOS biosynthetic process","type":"exact"},{"name":"negative regulation of NOS2 synthase biosynthesis","type":"narrow"},{"name":"negative regulation of NOS2 synthase biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type 2) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthesis","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase (type II) biosynthetic process","type":"narrow"},{"name":"negative regulation of nitric-oxide synthase 2 biosynthetic process","type":"narrow"}],"termid":"GO:0051771"}


id: PBO:0039310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 4, lysine demethylase","termid":"PBO:0039310"}


id: PBO:0043399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemerin chemokine-like receptor 2","termid":"PBO:0043399"}


id: PR:P40375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NAD-dependent malic enzyme that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04249","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.12c","secondary_identifiers":["UniProtKB:P40375"],"synonyms":[{"name":"NAD-ME (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-maeA","type":"exact"}],"termid":"PR:P40375"}


id: PBO:0067289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 372, pseudogene","termid":"PBO:0067289"}


id: FYPO:0008019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing arginine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on arginine nitrogen source","synonyms":[{"name":"normal cell population growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0008019"}


id: PBO:0091645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase","termid":"PBO:0091645"}


id: GO:0033005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of mast cell activation","termid":"GO:0033003"},{"relation_name":"positively_regulates","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation","termid":"GO:0033005"}


id: GO:1900759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of D-amino-acid oxidase activity","termid":"GO:1900757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of D-amino-acid oxidase activity","synonyms":[{"name":"activation of D-amino-acid oxidase activity","type":"narrow"},{"name":"activation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"activation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"activation of new yellow enzyme","type":"related"},{"name":"positive regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"positive regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"positive regulation of new yellow enzyme","type":"related"},{"name":"up regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up regulation of new yellow enzyme","type":"related"},{"name":"up-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"up-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"up-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"up-regulation of new yellow enzyme","type":"related"},{"name":"upregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"upregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"upregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"upregulation of new yellow enzyme","type":"related"}],"termid":"GO:1900759"}


id: PBO:0046250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 6","termid":"PBO:0046250"}


id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: PBO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (predicted)","termid":"PBO:0002085"}


id: PBO:0087433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087433"}


id: PBO:0068317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 17","termid":"PBO:0068317"}


id: PBO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 34","termid":"PBO:0072505"}


id: GO:0048938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of a glial cell in a lateral line nerve is generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in a lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"}


id: PR:Q10106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.06","secondary_identifiers":["UniProtKB:Q10106"],"synonyms":[{"name":"Spom972h-UTP11L","type":"exact"},{"name":"U3 snoRNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10106"}


id: PBO:0076267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIM-type zinc finger 7 associated protein 1","termid":"PBO:0076267"}


id: PBO:0081615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 543","termid":"PBO:0081615"}


id: MOD:00693
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated residue","synonyms":[{"name":"GlycoRes","type":"exact"}],"termid":"MOD:00693"}


id: PBO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC7 pseudogene 1","termid":"PBO:0046755"}


id: PBO:0067015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 25, pseudogene","termid":"PBO:0067015"}


id: GO:0051962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"positively_regulates","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system development","synonyms":[{"name":"activation of nervous system development","type":"narrow"},{"name":"stimulation of nervous system development","type":"narrow"},{"name":"up regulation of nervous system development","type":"exact"},{"name":"up-regulation of nervous system development","type":"exact"},{"name":"upregulation of nervous system development","type":"exact"}],"termid":"GO:0051962"}


id: PBO:0064335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLSCR4 pseudogene 1","termid":"PBO:0064335"}


id: PBO:0068732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 3, pseudogene","termid":"PBO:0068732"}


id: PBO:0051596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 22","termid":"PBO:0051596"}


id: PBO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 molecule (Indian blood group)","termid":"PBO:0042322"}


id: PBO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family, X-linked (pseudogene)","termid":"PBO:0051676"}


id: PBO:0091997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR-associated","termid":"PBO:0091997"}


id: PBO:0004476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I transcription factor subunit Rrn6 (predicted)","termid":"PBO:0004476"}


id: PBO:0062564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AD member 1","termid":"PBO:0062564"}


id: GO:0007390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo.","definition_xrefs":["GOC:bf","PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band shortening","synonyms":[{"name":"germ-band retraction","type":"exact"}],"termid":"GO:0007390"}


id: PBO:0072212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 11","termid":"PBO:0072212"}


id: PBO:0068784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 21, pseudogene","termid":"PBO:0068784"}


id: PBO:0040868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bcl2 modifying factor","termid":"PBO:0040868"}


id: GO:0021705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the locus ceruleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"pons formation","termid":"GO:0021584"},{"relation_name":"part_of","term_name":"locus ceruleus morphogenesis","termid":"GO:0021704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus formation","termid":"GO:0021705"}


id: GO:1903409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen.","definition_xrefs":["GOC:TermGenie","PMID:24252804","GOC:PARL","GO_REF:0000068","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reactive oxygen species biosynthetic process","synonyms":[{"name":"ROS formation","type":"related"},{"name":"ROS generation","type":"related"},{"name":"reactive oxygen species anabolism","type":"exact"},{"name":"reactive oxygen species biosynthesis","type":"exact"},{"name":"reactive oxygen species formation","type":"exact"},{"name":"reactive oxygen species generation","type":"related"},{"name":"reactive oxygen species synthesis","type":"exact"}],"termid":"GO:1903409"}


id: PBO:0061541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSUN5 pseudogene 1","termid":"PBO:0061541"}


id: PBO:0087019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis","termid":"PBO:0087019"}


id: RO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulates","termid":"RO:0002213"}


id: GO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Golgi localization","synonyms":[{"name":"Golgi apparatus localization","type":"exact"},{"name":"Golgi body localization","type":"exact"},{"name":"Golgi localisation","type":"exact"},{"name":"establishment and maintenance of Golgi localization","type":"exact"}],"termid":"GO:0051645"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: PBO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Kinesin Like protein","termid":"PBO:0017718"}


id: GO:0070603
data:
  {"annotated_genes":["SJAG_02990","SJAG_04355","SJAG_04097","SJAG_03036","SJAG_02869","SJAG_02872","SJAG_02447","SJAG_03033","SJAG_03576","SJAG_02303","SJAG_03758","SJAG_01016","SJAG_03844","SJAG_02254","SJAG_03839","SJAG_05020","SJAG_01111","SJAG_05192","SJAG_04005","SJAG_05282","SJAG_04596","SJAG_03145","SJAG_02466","SJAG_01611","SJAG_00440","SJAG_04879","SJAG_02385","SJAG_01465","SJAG_02589","SJAG_00743","SJAG_00045","SJAG_00735","SJAG_04755","SJAG_03982","SJAG_02571","SJAG_00739","SJAG_03694","SJAG_02549","SJAG_03787","SJAG_00873","SJAG_01622","SJAG_04213","SJAG_03944","SJAG_02798","SJAG_00746","SJAG_04989","SJAG_02500","SJAG_03579","SJAG_00934","SJAG_02778","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008623"},{"annotations":[70220,97040,104380,72215,108372,83593,89733,107485,104889,72483,84619,109431,94663,94903,110563,89626,97166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[83449,89818,108358,87935,89763,89629,83935,73433,78177,86290,105896,78391,100409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[103503,107357,71579,108515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[89748,108359,110198,76834,103797,75319,78745,83450,72558,70219,91470,102797,71647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[109909,97168,108375,103234,83764,93776,107487,88009,108538,112563,73380,78702,94492,104388,92219,76082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that contains an ortholog of the Saccharomyces ATPase Swi2/Snf2 as one of the catalytic subunit components (ATPase) and mediates assembly of nucleosomes, changes to the spacing or structure of nucleosomes, or some combination of those activities in a manner that requires ATP.","definition_xrefs":["PMID:16155938","GOC:mah","GOC:krc","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00440":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04879":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"SWI/SNF superfamily-type complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0090544"],"synonyms":[{"name":"BAF-type complex","type":"exact"},{"name":"SWI-SNF global transcription activator complex","type":"related"},{"name":"SWI-SNF-type complex","type":"exact"},{"name":"SWI/SNF-type complex","type":"related"},{"name":"SWI2/SNF2 superfamily ATP-dependent chromatin remodeling complex","type":"related"}],"termid":"GO:0070603","terms_by_termid":{"GO:0000812":null,"GO:0008623":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0070824":null}}


id: PBO:0071216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 57","termid":"PBO:0071216"}


id: GO:0060460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the left lung are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung morphogenesis","termid":"GO:0060425"},{"relation_name":"part_of","term_name":"left lung development","termid":"GO:0060459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left lung morphogenesis","termid":"GO:0060460"}


id: GO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome along the length of the centromeric region is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah","PMID:1708436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of mitotic sister chromatid cohesion","termid":"GO:0034088"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion, centromeric","termid":"GO:0071962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:0071960"}


id: PBO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 1","termid":"PBO:0072730"}


id: PBO:0063758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB2 pseudogene 1","termid":"PBO:0063758"}


id: GO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a bacterial-type specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type RNA polymerase activity (obsolete GO:0001061)","termid":"GO:0001061"}


id: FYPO:0004640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CAAX-protein geranylgeranyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal CAAX-protein geranylgeranyltransferase activity","termid":"FYPO:0004640"}


id: GO:1905175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:19088079","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"down regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"inhibition of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905175"}


id: PBO:0091288
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific splicing","termid":"PBO:0091288"}


id: PBO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf7","termid":"PBO:0001391"}


id: PBO:0085129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein involved in pre-25S rRNA processing; also involved in biogenesis of large 60S ribosomal subunit; contains an RNA recognition motif (RRM); binds to Ebp2; similar to Nop13p and Nsr1p","termid":"PBO:0085129"}


id: GO:0047689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = D-aspartate.","definition_xrefs":["RHEA:14973","EC:5.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"aspartate racemase activity","secondary_identifiers":["MetaCyc:ASPARTATE-RACEMASE-RXN","KEGG_REACTION:R00491"],"synonyms":[{"name":"D-aspartate racemase activity","type":"related"}],"termid":"GO:0047689"}


id: SO:1000037
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An extra chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_duplication","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosomal_duplication"],"synonyms":[{"name":"(Drosophila)Dp","type":"related"},{"name":"(fungi)Dp","type":"related"},{"name":"chromosomal duplication","type":"exact"}],"termid":"SO:1000037"}


id: PR:Q09894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.07c","synonyms":[{"name":"Spom972h-SPAC24B11.07c","type":"exact"}],"termid":"PR:Q09894"}


id: PBO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration (predicted)","termid":"PBO:0017759"}


id: PATO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000298 not arrested value (obsolete PATO:0000298)","termid":"PATO:0000298"}


id: PBO:0058923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7B host gene","termid":"PBO:0058923"}


id: PBO:0074205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A13 antisense RNA 1","termid":"PBO:0074205"}


id: PBO:0063531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZK1 interacting protein 1","termid":"PBO:0063531"}


id: PBO:0077024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 6","termid":"PBO:0077024"}


id: PBO:0039274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2","termid":"PBO:0039274"}


id: GO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in cardiac fibroblast development","termid":"GO:0060940"}


id: PBO:0011074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase (predicted)","termid":"PBO:0011074"}


id: PBO:0068774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 11, pseudogene","termid":"PBO:0068774"}


id: CHEBI:26981
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threitol","termid":"CHEBI:26981"}


id: PBO:0081924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 962, pseudogene","termid":"PBO:0081924"}


id: PBO:0075966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 7","termid":"PBO:0075966"}


id: MOD:01637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine removal","termid":"MOD:01637"}


id: GO:0033095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded storage granule found in cells of the aleurone layer in plants; contains either a protein matrix, protein-carbohydrate bodies and/or globoids. Aleurone grains are formed by the vacuole, rough endoplasmic reticulum and dictyosomes.","definition_xrefs":["Wikipedia:Aleurone","PMID:22452734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"aleurone grain","synonyms":[{"name":"aleurone body","type":"exact"}],"termid":"GO:0033095"}


id: PBO:0064504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II, I and III subunit E","termid":"PBO:0064504"}


id: GO:1901635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of presynaptic active zone structure (obsolete GO:1901635)","synonyms":[{"name":"regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901635"}


id: PATO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000525 soil composition sensitivity value (obsolete PATO:0000525)","termid":"PATO:0000525"}


id: PBO:0043352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1L pseudogene 1","termid":"PBO:0043352"}


id: GO:0110035
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97738],"is_not":false,"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively, and in a sequence-specific manner, a replication fork barrier found in rDNA spacers, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["PMID:27035982","GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA spacer replication fork barrier binding","termid":"GO:0043110"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"rDNA spacer replication fork barrier binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110035","terms_by_termid":{"GO:0110035":null}}


id: PBO:0077107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10B","termid":"PBO:0077107"}


id: GO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with luteinizing hormone (also called lutropin) to initiate a change in cell activity.","definition_xrefs":["PMID:18848524","PMID:1922095","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"luteinizing hormone receptor activity","secondary_identifiers":["GO:0004976"],"synonyms":[{"name":"LH receptor","type":"exact"},{"name":"LHR","type":"exact"},{"name":"lutropin receptor","type":"exact"},{"name":"lutropin-choriogonadotropic hormone receptor","type":"related"}],"termid":"GO:0004964"}


id: PBO:0057809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3130-2","termid":"PBO:0057809"}


id: PBO:0088923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ubiquitin-protein ligase E3, MARCH family","termid":"PBO:0088923"}


id: GO:0005690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U4atac, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U4atac snRNP, most of which remain associated with the U4atac snRNA both while the U4atac snRNP is free or assembled into the U4atac/U6atac complex or into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"U4atac snRNP","synonyms":[{"name":"snRNP U4atac","type":"exact"}],"termid":"GO:0005690"}


id: PBO:0043026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2A","termid":"PBO:0043026"}


id: FYPO:0002444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the cytoplasm, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"loss of punctate cytoplasmic protein localization","synonyms":[{"name":"abolished punctate cytoplasmic protein localization","type":"exact"},{"name":"cytoplasmic dots absent","type":"related"},{"name":"loss of punctate cytoplasmic protein localisation","type":"exact"},{"name":"loss of punctate cytoplasmic protein localization during mitotic cell cycle","type":"related"},{"name":"loss of punctate cytoplasmic protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002444"}


id: PATO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000497 relative rhythym value (obsolete PATO:0000497)","termid":"PATO:0000497"}


id: PBO:0051243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-62-1 (pseudogene)","termid":"PBO:0051243"}


id: GO:0060767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}


id: GO:1990493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex consisting of cyclin H and cyclin-dependent kinase 7 (CDK7). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:9857180"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin H-CDK7 complex (obsolete GO:1990493)","synonyms":[{"name":"cyclin H-CDK7 complex","type":"exact"}],"termid":"GO:1990493"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: GO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more methyl groups from a molecule.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"demethylation","termid":"GO:0070988"}


id: GO:0032294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating Schwann cell membrane encircles an axon in the peripheral nervous system. A single non-myelinating Schwann cell will typically associate with multiple axons.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-myelinated axon ensheathment","termid":"GO:0032285"},{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons in peripheral nervous system","type":"exact"}],"termid":"GO:0032294"}


id: GO:0032213
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance","termid":"GO:0032204"},{"relation_name":"regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200","GO:0007049"],"is_obsolete":false,"name":"regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032213","terms_by_termid":{"GO:0032215":null}}


id: GO:0071277
data:
  {"annotated_genes":["SJAG_03799","SJAG_03879","SJAG_04454","SJAG_02858","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93653,96478,105464,108582,111293],"is_not":false,"summary":null,"term":"GO:0071277"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to calcium ion","termid":"GO:0051592"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to Ca2+ ion","type":"exact"}],"termid":"GO:0071277","terms_by_termid":{"GO:0071277":null}}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: GO:0035744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 1 cell.","definition_xrefs":["CL:0000545","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"T-helper 1 cell cytokine production","synonyms":[{"name":"Th1 cell cytokine production","type":"exact"}],"termid":"GO:0035744"}


id: GO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian rhythm","synonyms":[{"name":"down regulation of circadian rhythm","type":"exact"},{"name":"down-regulation of circadian rhythm","type":"exact"},{"name":"downregulation of circadian rhythm","type":"exact"},{"name":"inhibition of circadian rhythm","type":"narrow"}],"termid":"GO:0042754"}


id: PBO:0015674
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae TIF34","termid":"PBO:0015674"}


id: PBO:0078546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 37","termid":"PBO:0078546"}


id: PBO:0004934
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.3.27","termid":"PBO:0004934"}


id: PBO:0039393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMZ2 pseudogene 2","termid":"PBO:0039393"}


id: PATO:0000295
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000295 relative activity value (obsolete PATO:0000295)","termid":"PATO:0000295"}


id: GO:0048610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular or single-celled organism.","definition_xrefs":["GOC:jid","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular process involved in reproduction (obsolete GO:0048610)","synonyms":[{"name":"cellular process involved in reproduction","type":"exact"},{"name":"reproductive cellular process","type":"related"}],"termid":"GO:0048610"}


id: PBO:0072055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 25","termid":"PBO:0072055"}


id: PBO:0109020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP192 pseudogene 1","termid":"PBO:0109020"}


id: GO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leucine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to leucine","termid":"GO:0043201"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leucine","termid":"GO:0071233"}


id: PBO:0042518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 1","termid":"PBO:0042518"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: PR:Q9USU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas2 gene.","definition_xrefs":["UniProtKB:Q9USU5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.08","synonyms":[{"name":"Spom972h-gas2","type":"exact"}],"termid":"PR:Q9USU5"}


id: GO:2000829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"negatively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of parathyroid hormone secretion","synonyms":[{"name":"negative regulation of PTH secretion","type":"exact"},{"name":"negative regulation of parathormone secretion","type":"exact"},{"name":"negative regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000829"}


id: GO:0098825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine guanylation","termid":"GO:0098825"}


id: GO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gonadotropin","termid":"GO:0034698"},{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to luteinizing hormone","synonyms":[{"name":"response to luteinizing hormone stimulus","type":"exact"}],"termid":"GO:0034699"}


id: PBO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 1","termid":"PBO:0047493"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: PATO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's having equal proportion around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symmetry","termid":"PATO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial symmetry","termid":"PATO:0001325"}


id: GO:0102602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16beta-hydroxy-beta-amyrin + O2 + H+ + NAD(P)H = 12,13beta-epoxy-16beta-hydroxy-beta-amyrin + H2O + NAD(P).","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"cytochrome P450 dependent 16beta-hydroxy-beta-amyrin epoxidase activity","secondary_identifiers":["MetaCyc:RXN-15386"],"termid":"GO:0102602"}


id: PBO:0003742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip3 subfamily","termid":"PBO:0003742"}


id: PBO:0070689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 60","termid":"PBO:0070689"}


id: PATO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001041 relative amplitude (obsolete PATO:0001041)","termid":"PATO:0001041"}


id: GO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"positively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of Golgi to plasma membrane protein transport","synonyms":[{"name":"activation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane protein transport","type":"exact"}],"termid":"GO:0042998"}


id: PBO:0050685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 12","termid":"PBO:0050685"}


id: PBO:0034316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sequentially_related_to","termid":"PBO:0034316"}


id: GO:0043227
data:
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