# terms

id: GO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which a bud forms from the mammary placode. A mammary bud is bulb of epithelial cells that is distinct from the surrounding epidermis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud formation","termid":"GO:0060615"}


id: PBO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member A","termid":"PBO:0047253"}


id: PR:O60163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysine-sensitive aspartokinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.04","secondary_identifiers":["UniProtKB:O60163"],"synonyms":[{"name":"Spom972h-lysC","type":"exact"},{"name":"aspartate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60163"}


id: GO:0015690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aluminum (Al) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"aluminum cation transport","synonyms":[{"name":"aluminium ion transport","type":"exact"},{"name":"aluminium transport","type":"exact"},{"name":"aluminum ion transport","type":"related"},{"name":"aluminum transport","type":"exact"}],"termid":"GO:0015690"}


id: PATO:0001464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that is equal to the potential energy per unit charge associated with a static (time-invariant) electric field, also called the electrostatic potential.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Electric_potential"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electric potential","termid":"PATO:0001464"}


id: PBO:0049498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 5, pseudogene","termid":"PBO:0049498"}


id: GO:0010012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-campestanaol + O2 = 6-deoxocathasterone + H2O.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steroid 22-alpha hydroxylase activity","termid":"GO:0010012"}


id: PBO:0027477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_cell_division_prior_to_G0_entry","termid":"PBO:0027477"}


id: PBO:0073972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 23","termid":"PBO:0073972"}


id: PBO:0061318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A3","termid":"PBO:0061318"}


id: PBO:0047912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(9)(q22.1)","termid":"PBO:0047912"}


id: PBO:0057563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 758","termid":"PBO:0057563"}


id: PBO:0041496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 56","termid":"PBO:0041496"}


id: GO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a glucosylglycerol from one side of a membrane to the other. A glucosylglycerol is an alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transporter activity","termid":"GO:0051474"}


id: GO:0120251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["Wikipedia:Hydrocarbon","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon biosynthetic process","synonyms":[{"name":"hydrocarbon anabolism","type":"exact"},{"name":"hydrocarbon biosynthesis","type":"exact"},{"name":"hydrocarbon formation","type":"exact"},{"name":"hydrocarbon synthesis","type":"exact"}],"termid":"GO:0120251"}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:14739239","PMID:20483913","RHEA:41740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0140101","GO:0003824","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: PBO:0090937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component, with EF hand and WH2 motif Panl","termid":"PBO:0090937"}


id: PBO:0072347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 33","termid":"PBO:0072347"}


id: GO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"fibroblast growth factor production","termid":"GO:0090269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of fibroblast growth factor production","termid":"GO:0090270"}


id: PBO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS antisense RNA 1","termid":"PBO:0044184"}


id: PBO:0054609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2014","termid":"PBO:0054609"}


id: PBO:0070730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a","termid":"PBO:0070730"}


id: PBO:0042595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 10","termid":"PBO:0042595"}


id: PBO:0078776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-8","termid":"PBO:0078776"}


id: PBO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 3","termid":"PBO:0075147"}


id: SO:0000702
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where there may have been an error in the assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_assembly_error","synonyms":[{"name":"possible assembly error","type":"exact"}],"termid":"SO:0000702"}


id: PR:O43058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sep1 gene.","definition_xrefs":["UniProtKB:O43058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead protein sep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.12","synonyms":[{"name":"Spom972h-sep1","type":"exact"}],"termid":"PR:O43058"}


id: PBO:0062986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 1","termid":"PBO:0062986"}


id: GO:0035195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway in which regulatory microRNAs (miRNAs) elicit silencing of specific target genes. miRNAs are endogenous 21-24 nucleotide small RNAs processed from stem-loop RNA precursors (pre-miRNAs). Once incorporated into a RNA-induced silencing complex (RISC), miRNAs can downregulate protein production by either of two posttranscriptional mechanisms: endonucleolytic cleavage of the RNA (often mRNA) or mRNA translational repression, usually accompanied by poly-A tail shortening and subsequent degradation of the mRNA. miRNAs are present in all the animals and in plants, whereas siRNAs are present in lower animals and in plants.","definition_xrefs":["GOC:rl","PMID:14744438","GOC:bc","PMID:28379604","PMID:23985560","PMID:23209154","PMID:15066283","PMID:15066275","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA-mediated post-transcriptional gene silencing","synonyms":[{"name":"gene silencing by miRNA","type":"exact"},{"name":"gene silencing by microRNA","type":"exact"},{"name":"miRNA-mediated gene silencing","type":"broad"},{"name":"microRNA-mediated gene silencing","type":"exact"}],"termid":"GO:0035195"}


id: PATO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's having arrived at the onset of puberty (the age at which sex glands become functional) but not yet fully mature.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent","termid":"PATO:0000455"}


id: GO:0140375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving a signal and transmitting it in a cell to initiate an immune response.","definition_xrefs":["Wikipedia:Immune_receptor","PMID:31415752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"immune receptor activity","termid":"GO:0140375"}


id: GO:1904842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:25626975","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitroglycerin","synonyms":[{"name":"response to nitroglycerine","type":"exact"},{"name":"response to nitroglycerol","type":"exact"},{"name":"response to trinitroglycerin","type":"exact"},{"name":"response to trinitroglycerol","type":"exact"}],"termid":"GO:1904842"}


id: PBO:0015243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin peroxidase Bcp1","termid":"PBO:0015243"}


id: PBO:0056600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm1 nuclear protein","termid":"PBO:0056600"}


id: GO:0046500
data:
  {"annotated_genes":["SJAG_01404","SJAG_03556","SJAG_03659","SJAG_02689","SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102376,88287,94546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019284"},{"annotations":[74617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006556"},{"annotations":[76520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033353"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01404":null,"SJAG_02689":null,"SJAG_03556":null,"SJAG_03614":null,"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-adenosylmethionine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"S-adenosyl methionine metabolic process","type":"exact"},{"name":"S-adenosyl methionine metabolism","type":"exact"},{"name":"S-adenosylmethionine metabolism","type":"exact"},{"name":"SAM metabolic process","type":"exact"}],"termid":"GO:0046500","terms_by_termid":{"GO:0006556":null,"GO:0019284":null,"GO:0033353":null}}


id: PBO:0078011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 1 (non-functional)","termid":"PBO:0078011"}


id: PBO:0090069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu1","termid":"PBO:0090069"}


id: GO:0036042
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75243],"is_not":false,"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to a long-chain fatty acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:krc","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA binding","termid":"GO:0000062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA binding","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"long-chain fatty acyl-coenyme A binding","type":"exact"}],"termid":"GO:0036042","terms_by_termid":{"GO:0036042":null}}


id: PBO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Spc24","termid":"PBO:0018007"}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PBO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 11 (pseudogene)","termid":"PBO:0045600"}


id: PBO:0081234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19","termid":"PBO:0081234"}


id: PBO:0079524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase related protein 1","termid":"PBO:0079524"}


id: PBO:0074873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 56","termid":"PBO:0074873"}


id: PBO:0040211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL3 divergent transcript","termid":"PBO:0040211"}


id: PBO:0065926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1","termid":"PBO:0065926"}


id: GO:0048753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"cellular pigmentation","termid":"GO:0033059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment granule organization","synonyms":[{"name":"pigment granule organisation","type":"exact"},{"name":"pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0048753"}


id: PR:P87148
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIF1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yif1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.06c","secondary_identifiers":["UniProtKB:P87148"],"synonyms":[{"name":"Spom972h-YIF1A","type":"exact"},{"name":"YIP1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heavy metal resistance factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87148"}


id: PBO:0073366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family I member 1","termid":"PBO:0073366"}


id: PATO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000733 piloerection value (obsolete PATO:0000733)","termid":"PATO:0000733"}


id: PBO:0038810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 17","termid":"PBO:0038810"}


id: GO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mating-type specific process that activates or increases the rate of cellular DNA-templated transcription.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating-type specific transcription, DNA-templated","termid":"GO:0007532"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mating-type specific transcription, DNA-templated","synonyms":[{"name":"activation of transcription, mating-type specific","type":"narrow"},{"name":"positive regulation of mating-type specific transcription, DNA-dependent","type":"exact"},{"name":"stimulation of transcription, mating-type specific","type":"narrow"},{"name":"up regulation of transcription, mating-type specific","type":"exact"},{"name":"up-regulation of transcription, mating-type specific","type":"exact"},{"name":"upregulation of transcription, mating-type specific","type":"exact"}],"termid":"GO:0045895"}


id: PBO:0063196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 18","termid":"PBO:0063196"}


id: PBO:0071632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 51","termid":"PBO:0071632"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: PBO:0061937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily M member 4 pseudogene","termid":"PBO:0061937"}


id: PBO:0070938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 46","termid":"PBO:0070938"}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: PBO:0090342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0090342"}


id: FYPO:0000854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleosome positioning in euchromatin","synonyms":[{"name":"abnormal nucleosome occupancy in euchromatin","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000854"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: GO:0048772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a leucophore cell. Leucophores are pigment cells derived from the neural crest. They contain uric acid or other purine crystals, deposited in stacks called leucosomes. This gives them a white appearance.","definition_xrefs":["GOC:jid","GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucophore differentiation","synonyms":[{"name":"leucophore cell differentiation","type":"exact"}],"termid":"GO:0048772"}


id: PBO:0065634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 3","termid":"PBO:0065634"}


id: GO:0106409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',3'-c-di-AMP + H2O = 5'-O-phosphonoadenylyl-(3'-5')-adenosine + H+.","definition_xrefs":["PMID:21909268","RHEA:54420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyclic-di-AMP phosphodiesterase activity","secondary_identifiers":["MetaCyc:RXN-19814","EC:3.1.4.59"],"termid":"GO:0106409"}


id: GO:0051017
data:
  {"annotated_genes":["SJAG_00677","SJAG_00938","SJAG_03011","SJAG_00970","SJAG_04621","SJAG_04522","SJAG_03088","SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71585,75543,76247,89446,113700],"is_not":false,"summary":null,"term":"GO:0051017"},{"annotations":[103482,111347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[102976],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"actin filament bundle organization","termid":"GO:0061572"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_03011":null,"SJAG_03088":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0045011"],"synonyms":[{"name":"actin bundling activity","type":"related"},{"name":"actin cable assembly","type":"related"},{"name":"actin cable formation","type":"related"}],"termid":"GO:0051017","terms_by_termid":{"GO:0032231":null,"GO:0051017":null,"GO:0070649":null}}


id: PBO:0045990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EI24 pseudogene 4","termid":"PBO:0045990"}


id: GO:0021828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a gonadotrophin-releasing hormone producing neuron from the nasal placode to the hypothalamus.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"hypothalamic tangential migration using cell-axon interactions","termid":"GO:0021856"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron development","termid":"GO:0021888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonadotrophin-releasing hormone neuronal migration to the hypothalamus","secondary_identifiers":["GO:0021857"],"synonyms":[{"name":"gonadotropin-releasing hormone neuronal migration to the hypothalamus","type":"exact"}],"termid":"GO:0021828"}


id: SO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Fifth intronic position after the intron exon boundary, close to the 5' edge of the intron.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"extended_cis_splice_site","termid":"SO:0001993"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_base_5","synonyms":[{"name":"intron base 5","type":"exact"}],"termid":"SO:0001994"}


id: PR:P50531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12172:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint protein rad17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.13","secondary_identifiers":["UniProtKB:P50531"],"synonyms":[{"name":"SPAC14C4.13","type":"related"},{"name":"Spom972h-RAD17","type":"exact"}],"termid":"PR:P50531"}


id: GO:0008689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinone-9 = S-adenosyl-L-homocysteine + ubiquinone-9.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinone-9 3-O-methyltransferase activity (obsolete GO:0008689)","termid":"GO:0008689"}


id: GO:0042866
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93808],"is_not":false,"summary":null,"term":"GO:0042866"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate, 2-oxopropanoate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyruvate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyruvate anabolism","type":"exact"},{"name":"pyruvate biosynthesis","type":"exact"},{"name":"pyruvate formation","type":"exact"},{"name":"pyruvate synthesis","type":"exact"}],"termid":"GO:0042866","terms_by_termid":{"GO:0042866":null}}


id: GO:0033840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NDP-glucose + (1,4-alpha-D-glucosyl)n = NDP + (1,4-alpha-D-glucosyl)n+1.","definition_xrefs":["EC:2.4.1.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"NDP-glucose-starch glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.242-RXN","RHEA:15873"],"synonyms":[{"name":"GBSS","type":"related"},{"name":"GBSSI","type":"related"},{"name":"GBSSII","type":"related"},{"name":"NDP-glucose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"NDPglucose-starch glucosyltransferase activity","type":"related"},{"name":"granule-bound starch synthase I activity","type":"related"},{"name":"granule-bound starch synthase II activity","type":"related"},{"name":"granule-bound starch synthase activity","type":"related"},{"name":"starch granule-bound nucleoside diphosphate glucose-starch glucosyltransferase activity","type":"related"},{"name":"starch synthase II activity","type":"related"},{"name":"waxy protein","type":"related"}],"termid":"GO:0033840"}


id: FYPO:0004051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased in a cell culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glutathione transferase activity","termid":"FYPO:0003981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione transferase activity during stationary phase","synonyms":[{"name":"increased glutathione transferase activity in stationary phase","type":"exact"}],"termid":"FYPO:0004051"}


id: PBO:0074548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF8 pseudogene 1","termid":"PBO:0074548"}


id: PBO:0089552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine family transmembrane transporter","termid":"PBO:0089552"}


id: GO:0036408
data:
  {"annotated_genes":["SJAG_02165","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86455,87074],"is_not":false,"summary":null,"term":"GO:0036408"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 14) = CoA + histone H3 N6-acetyl-L-lysine (position 14).","definition_xrefs":["PMID:21289066","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0034212","GO:0003674","GO:0016740","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"histone H3K14 acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K14 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K14 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K14 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K14 specific)","type":"exact"}],"termid":"GO:0036408","terms_by_termid":{"GO:0036408":null}}


id: PR:O94531
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ufe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin ufe1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.04c","synonyms":[{"name":"Spom972h-ufe1","type":"exact"}],"termid":"PR:O94531"}


id: GO:0044155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small pit, depression, or invagination, such as any of the minute pits or incuppings of the host cell membrane formed during pinocytosis, that communicates with the outside of a host cell and extends inward, indenting the host cytoplasm and the host cell membrane. Such caveolae may be pinched off to form free vesicles within the host cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host caveola","termid":"GO:0044155"}


id: GO:0006689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside metabolic process","termid":"GO:0001573"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"ganglioside catabolic process","synonyms":[{"name":"ganglioside breakdown","type":"exact"},{"name":"ganglioside catabolism","type":"exact"},{"name":"ganglioside degradation","type":"exact"}],"termid":"GO:0006689"}


id: PBO:0076036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33","termid":"PBO:0076036"}


id: PBO:0055633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3072","termid":"PBO:0055633"}


id: GO:0009605
data:
  {"annotated_genes":["SJAG_02026","SJAG_00233","SJAG_01970","SJAG_00380","SJAG_02699","SJAG_03048","SJAG_04032","SJAG_03266","SJAG_01162","SJAG_03319","SJAG_00359","SJAG_00209","SJAG_00169","SJAG_02380","SJAG_04873","SJAG_04637","SJAG_02496","SJAG_00534","SJAG_04054","SJAG_03256","SJAG_03309","SJAG_02258","SJAG_04268","SJAG_00256","SJAG_02973","SJAG_03486","SJAG_01245","SJAG_04743","SJAG_04067","SJAG_04725","SJAG_03519","SJAG_01509","SJAG_00781","SJAG_04031"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89881,112837,72060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[75201,90807,71657,104981,90281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[75266,111638,95925,75367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[89726,99219,89718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[100612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"},{"annotations":[71935,108563,102939,108562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[76158,77214,90235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[103782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"},{"annotations":[110743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99267],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[98247,99270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[96699,109945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019740"},{"annotations":[96870,83642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[97845],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"},{"annotations":[70659,109057],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00359":null,"SJAG_00380":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_01162":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02258":null,"SJAG_02380":null,"SJAG_02496":null,"SJAG_02699":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03266":null,"SJAG_03309":null,"SJAG_03319":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04054":null,"SJAG_04067":null,"SJAG_04268":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to external stimulus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"response to environmental stimulus","type":"exact"}],"termid":"GO:0009605","terms_by_termid":{"GO:0006808":null,"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0019676":null,"GO:0019740":null,"GO:0031142":null,"GO:0034198":null,"GO:0036245":null,"GO:0042149":null,"GO:0050982":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: FYPO:0002166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 3'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 3'-phosphatase activity","termid":"FYPO:0002165"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished polynucleotide 3'-phosphatase activity","synonyms":[{"name":"polynucleotide 3'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0002166"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: PBO:0005002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 2","termid":"PBO:0005002"}


id: PBO:0039559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 52","termid":"PBO:0039559"}


id: GO:0032180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of tyrosine to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006744"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006744","GO:0006520"],"is_obsolete":false,"name":"ubiquinone biosynthetic process from tyrosine","termid":"GO:0032180"}


id: GO:0045272
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of the respiratory chain located in the plasma membrane. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex I","termid":"GO:0045271"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex I","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex","type":"broad"},{"name":"respiratory chain complex I","type":"broad"}],"termid":"GO:0045272"}


id: GO:0140488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding specifically to heme to deliver it to a transport vesicle.","definition_xrefs":["PMID:32185489","PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"heme receptor activity","termid":"GO:0140488"}


id: PBO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 3 (predicted)","termid":"PBO:0000282"}


id: PBO:0050309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 11","termid":"PBO:0050309"}


id: PBO:0036071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036071"}


id: PBO:0087832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiamine pyrophosphokinase; phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate (thiamine diphosphate)","termid":"PBO:0087832"}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: PBO:0091119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane chaperone for multipass membrane proteins, PAT complex subunit (asterix), Pat10","termid":"PBO:0091119"}


id: GO:0021753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary nucleus development","termid":"GO:0021751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior salivary nucleus development","termid":"GO:0021753"}


id: GO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"isocitrate dehydrogenase complex (NAD+)","termid":"GO:0045242"}


id: GO:0019639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid catabolic process","termid":"GO:0016100"},{"relation_name":"is_a","term_name":"6-hydroxycineole metabolic process","termid":"GO:0019638"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"6-hydroxycineole catabolic process","secondary_identifiers":["MetaCyc:6-HYDROXYCINEOLE-DEGRADATION-PWY"],"synonyms":[{"name":"6-endo-hydroxycineole catabolic process","type":"exact"},{"name":"6-endo-hydroxycineole catabolism","type":"exact"},{"name":"6-hydroxycineole breakdown","type":"exact"},{"name":"6-hydroxycineole catabolism","type":"exact"},{"name":"6-hydroxycineole degradation","type":"exact"},{"name":"hydroxycineol catabolic process","type":"exact"},{"name":"hydroxycineol catabolism","type":"exact"}],"termid":"GO:0019639"}


id: PBO:0084662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-hydroxyacyl-thioester dehydratase; involved in fatty acid biosynthesis, required for respiratory growth and for normal mitochondrial morphology","termid":"PBO:0084662"}


id: PBO:0090175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex subunit 6","termid":"PBO:0090175"}


id: GO:0004047
data:
  {"annotated_genes":["SJAG_03641","SJAG_02901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91975,108261],"is_not":false,"summary":null,"term":"GO:0004047"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.","definition_xrefs":["EC:2.1.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"aminomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GCVT-RXN","RHEA:16945","Reactome:R-HSA-5693977"],"synonyms":[{"name":"S-aminomethyldihydrolipoylprotein:(6S)-tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"T-protein","type":"related"},{"name":"glycine synthase activity","type":"related"},{"name":"glycine-cleavage system T-protein activity","type":"related"},{"name":"protein-8-S-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"protein-S8-aminomethyldihydrolipoyllysine:tetrahydrofolate aminomethyltransferase (ammonia-forming) activity","type":"related"},{"name":"tetrahydrofolate aminomethyltransferase activity","type":"related"}],"termid":"GO:0004047","terms_by_termid":{"GO:0004047":null}}


id: PBO:0089542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, membrane-tethered Sre2","termid":"PBO:0089542"}


id: PBO:0013744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter Mfs2 (predicted)","termid":"PBO:0013744"}


id: GO:0050109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: morphine + NAD(P)+ = morphinone + NAD(P)H + H+.","definition_xrefs":["MetaCyc:MORPHINE-6-DEHYDROGENASE-RXN","EC:1.1.1.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"morphine 6-dehydrogenase activity","synonyms":[{"name":"morphine:NAD(P)+ 6-oxidoreductase activity","type":"related"},{"name":"naloxone reductase activity","type":"related"},{"name":"reductase, naloxone","type":"related"}],"termid":"GO:0050109"}


id: GO:0070462
data:
  {"annotated_genes":["SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99338,103602],"is_not":false,"summary":null,"term":"GO:0070462"}]},"cv_name":"biological_process","definition":"The removal of tubulin heterodimers from the plus end of a microtubule.","definition_xrefs":["PMID:16906148","GOC:krc","PMID:16906145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"plus-end specific microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070462","terms_by_termid":{"GO:0070462":null}}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: PR:O94302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RFT1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03770","PRO:DNx","PANTHER:PTHR13117:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharide translocation protein rft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.19","secondary_identifiers":["UniProtKB:O94302"],"synonyms":[{"name":"Spom972h-RFT1","type":"exact"}],"termid":"PR:O94302"}


id: GO:0110073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["GOC:ha","PMID:28495958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of actin filament-based movement","termid":"GO:1903115"},{"relation_name":"regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"}


id: PBO:0083936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactokinase; phosphorylates alpha-D-galactose to alpha-D-galactose-1-phosphate in the first step of galactose catabolism; expression regulated by Gal4p; human homolog GALK2 complements yeast null mutant; GAL1 has a paralog, GAL3, that arose from the whole genome duplication","termid":"PBO:0083936"}


id: GO:0010887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of cholesterol storage. Cholesterol storage is the accumulation and maintenance in cells or tissues of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol storage","termid":"GO:0010885"},{"relation_name":"is_a","term_name":"negative regulation of lipid storage","termid":"GO:0010888"},{"relation_name":"negatively_regulates","term_name":"cholesterol storage","termid":"GO:0010878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol storage","synonyms":[{"name":"negative regulation of cholesterol sequestration","type":"narrow"}],"termid":"GO:0010887"}


id: GO:0016890
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"site-specific endodeoxyribonuclease activity, specific for altered base","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.25.-"],"termid":"GO:0016890","terms_by_termid":{"GO:1990043":null}}


id: GO:0031489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class V myosin; myosin V is a dimeric molecule involved in intracellular transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"myosin V binding","termid":"GO:0031489"}


id: SO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an alanine anticodon, and a 3' alanine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"alanine_tRNA_primary_transcript","termid":"SO:0000211"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanyl_tRNA","synonyms":[{"name":"alanyl tRNA","type":"exact"},{"name":"alanyl-transfer RNA","type":"exact"},{"name":"alanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000254"}


id: PBO:0072499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 28","termid":"PBO:0072499"}


id: GO:0050899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"nitrile catabolic process","synonyms":[{"name":"nitrile breakdown","type":"exact"},{"name":"nitrile catabolism","type":"exact"},{"name":"nitrile degradation","type":"exact"}],"termid":"GO:0050899"}


id: PBO:0069683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 960, pseudogene","termid":"PBO:0069683"}


id: PBO:0005779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNP-associated protein core protein (predicted)","termid":"PBO:0005779"}


id: PBO:0071049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 51","termid":"PBO:0071049"}


id: GO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to an external stimulus.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taxis","secondary_identifiers":["Wikipedia:Taxis"],"synonyms":[{"name":"directed movement in response to stimulus","type":"exact"}],"termid":"GO:0042330"}


id: PBO:0085834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress; has potential orthologs in Saccharomyces species and in Yarrowia lipolytica","termid":"PBO:0085834"}


id: PBO:0068865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 105, pseudogene","termid":"PBO:0068865"}


id: PBO:0062508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily H member 3","termid":"PBO:0062508"}


id: PBO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis","termid":"PBO:0031266"}


id: PBO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHromodomain Protein","termid":"PBO:0001419"}


id: PBO:0079962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 9 Y-linked","termid":"PBO:0079962"}


id: FYPO:0007032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the glycosylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0006486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein glycosylation during vegetative growth","termid":"FYPO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased protein glycosylation during vegetative growth","synonyms":[{"name":"increased protein glycosylation during mitotic cell cycle","type":"related"},{"name":"protein hyperglycosylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007032"}


id: GO:0035818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of urine excreted over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of urine volume","termid":"GO:0035810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urine volume by pressure natriuresis","synonyms":[{"name":"diuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035818"}


id: PBO:0068403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 222","termid":"PBO:0068403"}


id: GO:0055024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle tissue development","termid":"GO:0016202"},{"relation_name":"regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue development","synonyms":[{"name":"regulation of heart muscle development","type":"exact"}],"termid":"GO:0055024"}


id: PBO:0029211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dTTP_biosynthetic_process","termid":"PBO:0029211"}


id: GO:2000895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a hemicellulose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemicellulose metabolic process","termid":"GO:0010410"},{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"hemicellulose catabolic process","synonyms":[{"name":"hemicellulose catabolism","type":"exact"}],"termid":"GO:2000895"}


id: PBO:0005716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase Fmn1","termid":"PBO:0005716"}


id: GO:0031990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mRNA from the nucleus to the cytoplasm during a heat stimulus, a temperature stimulus above the optimal temperature for the organism; in particular, a process that enables an organism withstand exposure to temperatures that would otherwise lethally impair poly(A)+ mRNA-nucleus export.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0010467","GO:0006913","GO:0051179"],"is_obsolete":false,"name":"mRNA export from nucleus in response to heat stress","synonyms":[{"name":"mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:0031990"}


id: FYPO:0005791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a shmoo forms with normal morphology, but in an abnormal location.","definition_xrefs":["GO:0000753","PMID:23200991","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abnormal shmoo directionality","synonyms":[{"name":"abnormal cell morphogenesis involved in conjugation with cellular fusion","type":"exact"},{"name":"abnormal shmoo orientation","type":"narrow"}],"termid":"FYPO:0005791"}


id: PBO:0058990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin","termid":"PBO:0058990"}


id: GO:0052108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont during interaction with host (obsolete GO:0052108)","synonyms":[{"name":"growth or development of organism during interaction with host","type":"exact"},{"name":"growth or development of organism in response to host","type":"exact"},{"name":"growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0052108"}


id: GO:0070993
data:
  {"annotated_genes":["SJAG_04900","SJAG_02390","SJAG_04981","SJAG_01117","SJAG_02263","SJAG_02164","SJAG_03472","SJAG_02376","SJAG_03147","SJAG_04744","SJAG_02995","SJAG_03732","SJAG_02628","SJAG_00662","SJAG_04891"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106594,95590,93335,93277,92414,91662,94457,100994,105978,73987,90383,85659,100703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016282"},{"annotations":[100995,106595,93278,92415,93336,85660,105979,93919,95591,91448,90384,100704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033290"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the small ribosomal subunit, a translation initiation ternary complex (i.e. an initiator tRNA, GTP, and an IF2 or eIF2 complex), and an mRNA.","definition_xrefs":["GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_01117":null,"SJAG_02164":null,"SJAG_02263":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_03732":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"translation preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070993","terms_by_termid":{"GO:0016282":null,"GO:0033290":null}}


id: GO:0016626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces an acceptor other than NAD, NADP, oxygen, an iron-sulfur protein, disulphide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors (obsolete GO:0016626)","synonyms":[{"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, other acceptors","type":"exact"}],"termid":"GO:0016626"}


id: GO:2001002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of hemicellulose catabolic process","termid":"GO:2000990"},{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"positively_regulates","term_name":"xylan catabolic process","termid":"GO:0045493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of xylan catabolic process","synonyms":[{"name":"positive regulation of xylan breakdown","type":"exact"},{"name":"positive regulation of xylan catabolism","type":"exact"},{"name":"positive regulation of xylan degradation","type":"exact"}],"termid":"GO:2001002"}


id: PBO:0088104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter; required for cell wall chitin synthesis; localized to the ER","termid":"PBO:0088104"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["UniProtKB:O13781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: PBO:0027259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-S10_phosphorylation","termid":"PBO:0027259"}


id: PBO:0031753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_long_and_short_cells_(obsolete_FYPO:0000454)","termid":"PBO:0031753"}


id: GO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the dorsal motor nucleus of the vagus nerve to attain its fully functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve maturation","termid":"GO:0035761"}


id: GO:0140113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and secretion of a set of components to form an extracellular microvesicule, a membrane-bounded vesicle that ranges in size 100 nm to 1 micron in size) and exits the cell by budding.","definition_xrefs":["PMID:28736435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle biogenesis","termid":"GO:0140112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"extracellular microvesicle biogenesis","synonyms":[{"name":"extracellular microvesicle assembly","type":"related"}],"termid":"GO:0140113"}


id: GO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of galactose that leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by galactose","termid":"GO:0000409"},{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription","termid":"GO:0045013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite repression of transcription by galactose","synonyms":[{"name":"down regulation of transcription by galactose","type":"exact"},{"name":"down-regulation of transcription by galactose","type":"exact"},{"name":"downregulation of transcription by galactose","type":"exact"},{"name":"inhibition of transcription by galactose","type":"narrow"}],"termid":"GO:0000410"}


id: PBO:0063863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 2","termid":"PBO:0063863"}


id: PR:000037085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is compose of two subunits of the non-acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, non-acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes-)*2","type":"exact"}],"termid":"PR:000037085"}


id: GO:0038191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the neuropilin family.","definition_xrefs":["GOC:bf","PMID:23871893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"neuropilin binding","synonyms":[{"name":"Nrp binding","type":"exact"},{"name":"Nrp ligand","type":"narrow"},{"name":"neuropilin-binding","type":"exact"}],"termid":"GO:0038191"}


id: PBO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 68","termid":"PBO:0050365"}


id: GO:0080090
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id: PBO:0075332
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id: SO:1000118
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id: PBO:0056653
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id: MOD:00624
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id: PBO:0061046
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id: PBO:0040752
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id: GO:0035755
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id: GO:0047575
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id: PBO:0067965
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id: PATO:0001535
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id: PBO:0011524
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id: PBO:0001608
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id: PBO:0083065
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id: GO:0008503
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id: PBO:0082203
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id: GO:0051293
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id: PBO:0078580
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id: PR:O74752
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id: PBO:0000389
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id: PBO:0084548
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id: GO:0071700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"olfactory placode development","termid":"GO:0071698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory placode maturation","termid":"GO:0071700"}


id: GO:0047719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole + O2 = 2-formamidobenzaldehyde.","definition_xrefs":["EC:1.13.11.17","RHEA:11212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"indole 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:INDOLE-23-DIOXYGENASE-RXN","KEGG_REACTION:R02338"],"synonyms":[{"name":"IDO","type":"related"},{"name":"indole oxidase activity","type":"related"},{"name":"indole-oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"indole:O2 oxidoreductase activity","type":"related"},{"name":"indole:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047719"}


id: PBO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Spt16","termid":"PBO:0004611"}


id: GO:0033637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to cold (obsolete GO:0033637)","synonyms":[{"name":"freezing tolerance","type":"related"}],"termid":"GO:0033637"}


id: PBO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.13","termid":"PBO:0004634"}


id: PR:P22068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00384","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.12c","secondary_identifiers":["UniProtKB:P22068"],"synonyms":[{"name":"Spom972h-ATP5B","type":"exact"}],"termid":"PR:P22068"}


id: PBO:0079028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-1","termid":"PBO:0079028"}


id: PBO:0070847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 26","termid":"PBO:0070847"}


id: PBO:0085875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0085875"}


id: GO:0004639
data:
  {"annotated_genes":["SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76137],"is_not":false,"summary":null,"term":"GO:0004639"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate + ATP = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.6","RHEA:22628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02364":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R04591","MetaCyc:SAICARSYN-RXN","Reactome:R-HSA-73805"],"synonyms":[{"name":"4-((N-succinylamino)carbonyl)-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"4-(N-succinocarboxamide)-5-aminoimidazole synthetase activity","type":"related"},{"name":"4-[(N-succinylamino)carbonyl]-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate:L-aspartate ligase (ADP-forming)","type":"related"},{"name":"5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase activity","type":"related"},{"name":"PurC","type":"related"},{"name":"SAICAR synthase activity","type":"related"},{"name":"SAICAR synthetase activity","type":"related"},{"name":"SAICARs activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthetase activity","type":"related"}],"termid":"GO:0004639","terms_by_termid":{"GO:0004639":null}}


id: PBO:0064657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periphilin 1","termid":"PBO:0064657"}


id: PBO:0056106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA1 pseudogene 1","termid":"PBO:0056106"}


id: PBO:0079173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 2","termid":"PBO:0079173"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: GO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.","definition_xrefs":["VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint","secondary_identifiers":["VZ:881"],"synonyms":[{"name":"perturbation by virus of host G0/G1 transition checkpoint","type":"narrow"},{"name":"G0/G1 host cell cycle checkpoint dysregulation by virus","type":"narrow"},{"name":"modulation by virus of host G0/G1 transition checkpoint","type":"narrow"}],"termid":"GO:0039646"}


id: GO:0006274
data:
  {"annotated_genes":["SJAG_00073","SJAG_00247","SJAG_00998","SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[87789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902979"},{"annotations":[97734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071807"},{"annotations":[110213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071170"},{"annotations":[77442,88976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The process in which DNA replication at a replication fork ceases; occurs when the replication fork reaches a specific termination site or when two replication forks meet.","definition_xrefs":["GOC:mah","PMID:10209736","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00998":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0006274","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071807":null,"GO:0071946":null,"GO:1902979":null}}


id: PBO:0090679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24-like protein involved in ribosome biogenesis Rlp24","termid":"PBO:0090679"}


id: GO:0033576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in the cytosol.","definition_xrefs":["GOC:mah","GOC:pr","PMID:12042244"],"gene_count":0,"genotype_count":0,"name":"obsolete protein glycosylation in cytosol (obsolete GO:0033576)","synonyms":[{"name":"protein amino acid glycosylation in cytosol","type":"exact"}],"termid":"GO:0033576"}


id: PBO:0060282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 16 pseudogene","termid":"PBO:0060282"}


id: PR:Q09766
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane protein 63C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C24H6.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.13","secondary_identifiers":["UniProtKB:Q09766"],"synonyms":[{"name":"Spom972h-TMEM63C","type":"exact"}],"termid":"PR:Q09766"}


id: GO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport.","definition_xrefs":["PMID:21750193","GOC:cilia","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"ciliary basal body","secondary_identifiers":["GO:0005932","NIF_Subcellular:sao11978067"],"synonyms":[{"name":"basal body","type":"broad"},{"name":"cilial basal body","type":"exact"},{"name":"cilium basal body","type":"exact"},{"name":"kinetosome","type":"exact"},{"name":"microtubule basal body","type":"exact"}],"termid":"GO:0036064"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: GO:0072268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within the metanephros to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pattern specification involved in metanephros development","synonyms":[{"name":"metanephros pattern formation","type":"related"},{"name":"metanephros pattern specification","type":"exact"},{"name":"pattern formation involved in metanephros development","type":"related"}],"termid":"GO:0072268"}


id: _global:occupancy
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"A number representing what proportion of copies of the protein have the modification.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupancy","termid":"_global:occupancy"}


id: PBO:0059003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated D","termid":"PBO:0059003"}


id: SO:1001192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that do not have overlapping peptide sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_greater_than_1_polypeptide","termid":"SO:1001189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_disjoint_polypeptides","synonyms":[{"name":"encodes disjoint polypeptides","type":"exact"}],"termid":"SO:1001192"}


id: PBO:0042669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 3","termid":"PBO:0042669"}


id: GO:0046826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of protein export from nucleus","termid":"GO:0046825"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"negatively_regulates","term_name":"protein export from nucleus","termid":"GO:0006611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913","GO:0051179"],"is_obsolete":false,"name":"negative regulation of protein export from nucleus","synonyms":[{"name":"down regulation of protein export from nucleus","type":"exact"},{"name":"down-regulation of protein export from nucleus","type":"exact"},{"name":"downregulation of protein export from nucleus","type":"exact"},{"name":"inhibition of protein export from nucleus","type":"narrow"},{"name":"negative regulation of protein export from cell nucleus","type":"exact"},{"name":"negative regulation of protein export out of nucleus","type":"exact"},{"name":"negative regulation of protein transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of protein-nucleus export","type":"exact"}],"termid":"GO:0046826"}


id: PBO:0030033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-conjugation_without_glucose_starvation","termid":"PBO:0030033"}


id: PBO:0083093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage and meiotic pachytene checkpoint protein; subunit of a heterotrimeric complex (Rad17p-Mec3p-Ddc1p) that forms a sliding clamp, loaded onto partial duplex DNA by a clamp loader complex; homolog of human and S. pombe Hus1","termid":"PBO:0083093"}


id: PBO:0054624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2029","termid":"PBO:0054624"}


id: GO:1901084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pyrrolizidine alkaloid.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrrolizidine alkaloid catabolic process (obsolete GO:1901084)","synonyms":[{"name":"pyrrolizidine alkaloid breakdown","type":"exact"},{"name":"pyrrolizidine alkaloid catabolism","type":"exact"},{"name":"pyrrolizidine alkaloid degradation","type":"exact"}],"termid":"GO:1901084"}


id: PBO:0087899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulating multidrug resistance and oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro","termid":"PBO:0087899"}


id: PBO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.31","termid":"PBO:0005241"}


id: PBO:0080693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 1","termid":"PBO:0080693"}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: SO:0000028
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Two bases paired opposite each other by hydrogen bonds creating a secondary structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"base_pair","secondary_identifiers":["http://en.wikipedia.org/wiki/Base_pair"],"synonyms":[{"name":"base pair","type":"exact"}],"termid":"SO:0000028"}


id: PR:Q10151
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ERD1 homolog 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.05c","synonyms":[{"name":"Spom972h-SPAC1D4.05c","type":"exact"}],"termid":"PR:Q10151"}


id: PBO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 13","termid":"PBO:0070881"}


id: PBO:0056722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 4","termid":"PBO:0056722"}


id: PR:000050452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rnc1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"RNA-binding protein that suppresses calcineurin deletion 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"SPCC757.09c","type":"related"},{"name":"Spom-rnc1","type":"exact"},{"name":"rnc1","type":"related"}],"termid":"PR:000050452"}


id: PBO:0062142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 8 pseudogene","termid":"PBO:0062142"}


id: SO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The coding exon that is most 3-prime on a given transcript.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon","synonyms":[{"name":"3' coding exon","type":"related"},{"name":"three prime coding exon","type":"exact"}],"termid":"SO:0000202"}


id: PBO:0058241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4528","termid":"PBO:0058241"}


id: PBO:0041422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 34","termid":"PBO:0041422"}


id: PBO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-25","termid":"PBO:0075062"}


id: GO:0060534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tracheal cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage development","termid":"GO:0051216"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea cartilage development","termid":"GO:0060534"}


id: PBO:0052805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 72","termid":"PBO:0052805"}


id: GO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: scopoletin + UDP-D-glucose = H+ + scopolin + UDP.","definition_xrefs":["EC:2.4.1.128","RHEA:20453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"scopoletin glucosyltransferase activity","secondary_identifiers":["MetaCyc:SCOPOLETIN-GLUCOSYLTRANSFERASE-RXN","KEGG_REACTION:R03594"],"synonyms":[{"name":"SGTase activity","type":"related"},{"name":"UDP-glucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:scopoletin glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-scopoletin glucosyltransferase activity","type":"related"}],"termid":"GO:0050275"}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: PATO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ictal","termid":"PATO:0001913"}


id: GO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for a salty taste stimulus to be received and converted to a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception of taste","termid":"GO:0050912"},{"relation_name":"part_of","term_name":"sensory perception of salty taste","termid":"GO:0050914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of salty taste","synonyms":[{"name":"perception of salty taste, detection of chemical stimulus","type":"exact"},{"name":"perception of salty taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"salty taste detection","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of salty taste","type":"exact"},{"name":"sensory detection of salty taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of salty taste","type":"exact"},{"name":"sensory transduction of salty taste","type":"exact"}],"termid":"GO:0001583"}


id: GO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism modulates the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["PMID:18305167","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of viral release from host cell (obsolete GO:0044789)","termid":"GO:0044789"}


id: PR:P39964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle 5-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01129","PANTHER:PTHR10641:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division cycle 5-like protein","termid":"PR:000005216"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cdc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.12","secondary_identifiers":["UniProtKB:P39964"],"synonyms":[{"name":"Spom972h-CDC5L","type":"exact"},{"name":"cell division control protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39964"}


id: PBO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031527"}


id: PBO:0087659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the HOPS endocytic tethering complex; vacuole membrane protein that functions as a Rab GTPase effector, interacting specifically with the GTP-bound conformation of Ypt7p, facilitating tethering, docking and promoting membrane fusion events at the late endosome and vacuole; required for both membrane and protein trafficking; Yck3p-mediated phosphorylation regulates the organization of vacuolar fusion sites","termid":"PBO:0087659"}


id: PBO:0028034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_microtubule_array_organization","termid":"PBO:0028034"}


id: GO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a carbohydrate is transported to, or maintained in, a specific location. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"carbohydrate localization","synonyms":[{"name":"carbohydrate localisation","type":"exact"}],"termid":"GO:0052575"}


id: PBO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti2 (predicted)","termid":"PBO:0002495"}


id: PATO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rate","termid":"PATO:0000161"}


id: GO:0102417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin 7-O-beta-D-glucoside + UDP-alpha-D-glucose = apigenin-7-O-gentiobioside + UDP + H+.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"apigenin-7-O-glucoside 1,6-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13800"],"termid":"GO:0102417"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["PMID:22118932","PMID:23945166","GOC:cilia","GOC:kmv","PMID:14570576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: GO:1990155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Dsc E3 ubiquitin ligase complex, an E3 ubiquitin ligase complex localized to the ER and Golgi membrane.","definition_xrefs":["PMID:23760507","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Dsc E3 ubiquitin ligase complex assembly","synonyms":[{"name":"Dsc complex assembly","type":"exact"}],"termid":"GO:1990155"}


id: PBO:0055695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1L antisense RNA 1","termid":"PBO:0055695"}


id: GO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root epithelium; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root epithelial mucilage metabolic process","termid":"GO:0048361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root epithelial mucilage biosynthetic process","synonyms":[{"name":"root epithelial mucilage anabolism","type":"exact"},{"name":"root epithelial mucilage biosynthesis","type":"exact"},{"name":"root epithelial mucilage formation","type":"exact"},{"name":"root epithelial mucilage synthesis","type":"exact"}],"termid":"GO:0048356"}


id: GO:0061819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of small fragments of circular extrachromosomal DNA elements which contain telomeric DNA. It is speculated that telomeric DNA-containing double minutes are formed through a recombination event between the telomere and chromosome-internal TTAGGG-like sequences. Telomeric DNA-containing double minutes appear as two closely positioned dots in metaphase.","definition_xrefs":["GOC:BHF","PMID:14690602","GOC:BHF_telomere","PMID:2397458","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via recombination","termid":"GO:0000722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomeric DNA-containing double minutes formation","synonyms":[{"name":"TDMs formation","type":"exact"}],"termid":"GO:0061819"}


id: GO:0046135
data:
  {"annotated_genes":["SJAG_00957","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86355],"is_not":false,"summary":null,"term":"GO:0046135"},{"annotations":[70147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyrimidine nucleoside breakdown","type":"exact"},{"name":"pyrimidine nucleoside catabolism","type":"exact"},{"name":"pyrimidine nucleoside degradation","type":"exact"}],"termid":"GO:0046135","terms_by_termid":{"GO:0009972":null,"GO:0046135":null}}


id: PBO:0045894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 6","termid":"PBO:0045894"}


id: PR:O00091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-6-phosphate 1-dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.18","secondary_identifiers":["UniProtKB:O00091"],"synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3A12.18","type":"related"},{"name":"Spom972h-G6PD","type":"exact"}],"termid":"PR:O00091"}


id: PBO:0075398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SP110 nuclear body protein","termid":"PBO:0075398"}


id: GO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron projection that is found in unipolar neurons and corresponds to the region between the cell body and the point at which the single projection branches.","definition_xrefs":["GOC:mah","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell body fiber","synonyms":[{"name":"cell body fibre","type":"exact"},{"name":"primary neurite","type":"related"}],"termid":"GO:0070852"}


id: GO:0015468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plasmid-encoded bacteriocins which are produced by enteric bacteria. Exert a lethal effect on other bacteria including E. coli strains that lack the Col plasmid. Bind to a cell surface receptor and are transported into the periplasm via an energy-dependent process involving a TonB- or TolA-dependent hetero-oligomeric protein complex. Some colicins kill their target cell by inserting into the cytoplasmic membrane where they form voltage-sensitive (trans-negative) channels that depolarize and deenergize the cell, and thereby kill it.","definition_xrefs":["TC:1.C.1.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete colicin (obsolete GO:0015468)","synonyms":[{"name":"colicin","type":"exact"}],"termid":"GO:0015468"}


id: PBO:0072600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 1","termid":"PBO:0072600"}


id: GO:0036130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H2 + NADPH + H+ -> prostaglandin F2alpha + NADP+. This reaction is the reduction of prostaglandin H2 ((5Z,13E)-(15S)-9alpha,11alpha-Epidioxy-15-hydroxyprosta-5,13-dienoate) to prostaglandin F2alpha ((5Z,13E)-(15S)-9alpha,11alpha,15-Trihydroxyprosta-5,13-dienoate).","definition_xrefs":["KEGG_REACTION:R02264","PMID:16475787","PMID:14979715","PMID:10622721","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"prostaglandin H2 endoperoxidase reductase activity","secondary_identifiers":["Reactome:R-HSA-2161549","RHEA:45312"],"synonyms":[{"name":"PGH2 9,11-endoperoxidase","type":"exact"},{"name":"PGH2 9-,11-endoperoxide reductase","type":"exact"}],"termid":"GO:0036130"}


id: GO:0043022
data:
  {"annotated_genes":["SJAG_02026","SJAG_02856","SJAG_05332","SJAG_03658","SJAG_02208","SJAG_02330","SJAG_01074","SJAG_00231","SJAG_02189","SJAG_01917","SJAG_03232","SJAG_01438","SJAG_03012","SJAG_00750","SJAG_00188","SJAG_03882","SJAG_01176","SJAG_04874","SJAG_02061","SJAG_01117","SJAG_02171","SJAG_03548","SJAG_01806","SJAG_05000","SJAG_02746","SJAG_03629","SJAG_02812","SJAG_04351","SJAG_04560","SJAG_03788","SJAG_03094","SJAG_04635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72995,73400,76144,76357,77251,78593,78862,84553,86973,89440,93840,94957,96778,104488,104489,105901,107898,108086,112746],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[98075,100981,72081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[71435,75791,75773,73067,78191,84155,90816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[76754,98958,73988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a ribosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00750":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01438":null,"SJAG_01806":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribosome binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0030376"],"synonyms":[{"name":"ribosome receptor activity","type":"narrow"}],"termid":"GO:0043022","terms_by_termid":{"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0097177":null}}


id: GO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + L-glutamine = CoA + alpha-N-phenylacetyl-L-glutamine.","definition_xrefs":["EC:2.3.1.14","MetaCyc:GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutamine N-phenylacetyltransferase activity","secondary_identifiers":["RHEA:21844"],"synonyms":[{"name":"glutamine phenylacetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine N-acetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine alpha-N-phenylacetyltransferase activity","type":"related"}],"termid":"GO:0047947"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: PBO:0069788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1074, pseudogene","termid":"PBO:0069788"}


id: PBO:0041583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 39","termid":"PBO:0041583"}


id: PBO:0074552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 5","termid":"PBO:0074552"}


id: PBO:0028505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphodiesterase_I_activity","termid":"PBO:0028505"}


id: FYPO:0008114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to amiloride. Cells stop growing (and may die) at a concentration of amiloride that allows wild type cells to grow.","definition_xrefs":["PMID:15537393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to amiloride","termid":"FYPO:0008114"}


id: PBO:0031543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_prospore_membrane","termid":"PBO:0031543"}


id: PBO:0039050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with FG repeats 2","termid":"PBO:0039050"}


id: PBO:0039959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 2","termid":"PBO:0039959"}


id: GO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the androecium over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"androecium development","termid":"GO:0048466"}


id: PBO:0048256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 4","termid":"PBO:0048256"}


id: PBO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates mei2","termid":"PBO:0004753"}


id: PBO:0091667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm3","termid":"PBO:0091667"}


id: GO:0033137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine phosphorylation","termid":"GO:0033137"}


id: GO:0032535
data:
  {"annotated_genes":["SJAG_02700","SJAG_04479","SJAG_01993","SJAG_00521","SJAG_00409","SJAG_04100","SJAG_04332","SJAG_01805","SJAG_02532","SJAG_04982","SJAG_04668","SJAG_00279","SJAG_03086","SJAG_02019","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77986,75039,87964,78678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[91269,109147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006884"},{"annotations":[101879,88037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"},{"annotations":[89424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045793"},{"annotations":[86377,100556,76298,78222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[90154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008361"},{"annotations":[72064,75043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that modulates the size of a cellular component.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00409":null,"SJAG_00521":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04332":null,"SJAG_04479":null,"SJAG_04668":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular component size","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0032535","terms_by_termid":{"GO:0006884":null,"GO:0008361":null,"GO:0009992":null,"GO:0030833":null,"GO:0042989":null,"GO:0045793":null,"GO:0051016":null}}


id: PBO:0054221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1602","termid":"PBO:0054221"}


id: GO:0043159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction.","definition_xrefs":["PMID:8949900","GOC:jl","PMID:9139729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"acrosomal matrix","termid":"GO:0043159"}


id: PR:000027602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/InitMet-/Phos:(T3)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"hht3/InitMet-/Phos:(T3)","type":"exact"},{"name":"hht3/InitMet-/Phos:(T4)","type":"exact"}],"termid":"PR:000027602"}


id: GO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleoside biosynthetic process","synonyms":[{"name":"deoxyribonucleoside anabolism","type":"exact"},{"name":"deoxyribonucleoside biosynthesis","type":"exact"},{"name":"deoxyribonucleoside formation","type":"exact"},{"name":"deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046120"}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: PBO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 36 (pseudogene)","termid":"PBO:0045624"}


id: GO:0003060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which acetylcholine released from vagus nerve endings binds to muscarinic receptors and decreases the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of the force of heart contraction by chemical signal","termid":"GO:0003108"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by acetylcholine","termid":"GO:0003068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction by acetylcholine","synonyms":[{"name":"decreased force of heart contraction by acetylcholine","type":"exact"}],"termid":"GO:0003060"}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: GO:1900457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900457"}


id: GO:0090169
data:
  {"annotated_genes":["SJAG_04464","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[106285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle organization","termid":"GO:0090224"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0008150","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"regulation of spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle formation","type":"exact"}],"termid":"GO:0090169","terms_by_termid":{"GO:0110161":null,"GO:1901673":null}}


id: PBO:0003993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Sad1","termid":"PBO:0003993"}


id: GO:1903487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lactation.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:19563620","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of lactation","termid":"GO:1903487"}


id: PBO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 11","termid":"PBO:0043732"}


id: GO:0034626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which two or more C-C double bonds have been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation, unsaturated fatty acid","termid":"GO:0019368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid elongation, polyunsaturated fatty acid","termid":"GO:0034626"}


id: PBO:0090535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex catalytic subunit Naa30","termid":"PBO:0090535"}


id: PBO:0035872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules_curved_around_cell_end_during_mitotic_interphase","termid":"PBO:0035872"}


id: GO:0043207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to external biotic stimulus","termid":"GO:0043207"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:25150219","PMID:21422230","GOC:cilia","PMID:18337471","PMID:21555462","PMID:21498478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: GO:0090199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"}


id: PBO:0046335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl aminopeptidase","termid":"PBO:0046335"}


id: GO:2000649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transporter activity","synonyms":[{"name":"regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000649"}


id: GO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate determination","termid":"GO:0048664"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: PBO:0063481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 1","termid":"PBO:0063481"}


id: GO:0075051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075051)","synonyms":[{"name":"negative regulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075051"}


id: PBO:0065524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 1","termid":"PBO:0065524"}


id: PBO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof2","termid":"PBO:0004128"}


id: PBO:0069203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 457, pseudogene","termid":"PBO:0069203"}


id: PR:O14216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.11","secondary_identifiers":["UniProtKB:O14216","PR:000027524"],"synonyms":[{"name":"DNA replication regulator drc1","type":"exact"},{"name":"SPAC6B12.11","type":"related"},{"name":"Spom972h-SLD2","type":"exact"}],"termid":"PR:O14216"}


id: PBO:0065343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A","termid":"PBO:0065343"}


id: GO:1905463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["PMID:26503245","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA duplex unwinding","termid":"GO:1905462"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"DNA duplex unwinding","termid":"GO:0032508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA duplex unwinding","synonyms":[{"name":"down regulation of DNA duplex unwinding","type":"exact"},{"name":"down regulation of DNA unwinding","type":"exact"},{"name":"down regulation of duplex DNA melting","type":"exact"},{"name":"down-regulation of DNA duplex unwinding","type":"exact"},{"name":"down-regulation of DNA unwinding","type":"exact"},{"name":"down-regulation of duplex DNA melting","type":"exact"},{"name":"downregulation of DNA duplex unwinding","type":"exact"},{"name":"downregulation of DNA unwinding","type":"exact"},{"name":"downregulation of duplex DNA melting","type":"exact"},{"name":"inhibition of DNA duplex unwinding","type":"narrow"},{"name":"inhibition of DNA unwinding","type":"narrow"},{"name":"inhibition of duplex DNA melting","type":"narrow"},{"name":"negative regulation of DNA unwinding","type":"exact"},{"name":"negative regulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905463"}


id: GO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An angiotensin receptor activity that acts via Gq-mediated activation of phospholipase C followed by phosphoinositide hydrolysis and Ca2+ signaling, and may act via additional signaling mechanisms.","definition_xrefs":["GOC:mah","PMID:10977869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor activity","termid":"GO:0001595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"angiotensin type I receptor activity","synonyms":[{"name":"PLC-activating angiotensin receptor activity","type":"exact"}],"termid":"GO:0001596"}


id: PBO:0031196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dithiothreitol","termid":"PBO:0031196"}


id: GO:0090223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from chromatin.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"chromatin-templated microtubule nucleation","termid":"GO:0090223"}


id: PBO:0066610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 1","termid":"PBO:0066610"}


id: GO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a migrating neuromast primordium deposits clusters of undifferentiated cells (proneuromasts) along its migratory path in a developing lateral line.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast deposition","termid":"GO:0048885"}


id: PBO:0040198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 11","termid":"PBO:0040198"}


id: PBO:0027901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spliced_cen-dg_RNA_level","termid":"PBO:0027901"}


id: PBO:0030626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_during_vegetative_growth","termid":"PBO:0030626"}


id: PR:O74815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk27 gene.","definition_xrefs":["UniProtKB:O74815","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.04","synonyms":[{"name":"Spom972h-ppk27","type":"exact"}],"termid":"PR:O74815"}


id: PBO:0060289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 6","termid":"PBO:0060289"}


id: GO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.","definition_xrefs":["RHEA:10628","PMID:2455297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0140098","GO:0140101","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tRNA nucleotidyltransferase activity","secondary_identifiers":["MetaCyc:TRNA-NUCLEOTIDYLTRANSFERASE-RXN","EC:2.7.7.56"],"synonyms":[{"name":"RNase PH activity","type":"related"},{"name":"phosphate-dependent exonuclease activity","type":"related"},{"name":"ribonuclease PH activity","type":"related"}],"termid":"GO:0009022"}


id: PBO:0046015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK1 pseudogene 1","termid":"PBO:0046015"}


id: PBO:0036555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Adn3","termid":"PBO:0036555"}


id: PBO:0087085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L4A; N-terminally acetylated; homologous to mammalian ribosomal protein L4 and bacterial L4; RPL4A has a paralog, RPL4B, that arose from the whole genome duplication","termid":"PBO:0087085"}


id: PBO:0078926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-2","termid":"PBO:0078926"}


id: GO:0060783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein in the mesenchymal cells of the prostate that contribute to the progression of the prostate over time. This process contributes to lung development.","definition_xrefs":["PMID:12221011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"epithelial-mesenchymal signaling involved in prostate gland development","termid":"GO:0060738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal smoothened signaling pathway involved in prostate gland development","synonyms":[{"name":"mesenchymal hedgehog signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal hh signaling pathway involved in prostate gland development","type":"exact"},{"name":"mesenchymal smoothened signalling pathway involved in prostate gland development","type":"exact"}],"termid":"GO:0060783"}


id: PBO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp1","termid":"PBO:0000928"}


id: PBO:0081297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 77","termid":"PBO:0081297"}


id: PBO:0057355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-3","termid":"PBO:0057355"}


id: PBO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 2","termid":"PBO:0044494"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: PBO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase (predicted)","termid":"PBO:0004965"}


id: GO:0062072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a histone H3 in which the lysine residue at position 9 has been modified by trimethylation.","definition_xrefs":["PMID:30110338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated histone binding","termid":"GO:0035064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"H3K9me3 modified histone binding","termid":"GO:0062072"}


id: PBO:0087180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex; physically interacts with transcriptional activator Msn4p, to regulate transcription of AYR1, a gene involved in lipid metabolism","termid":"PBO:0087180"}


id: PBO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 3, pseudogene","termid":"PBO:0044118"}


id: PBO:0083515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF KIP3/YGL216W","termid":"PBO:0083515"}


id: PBO:0082532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-3 has a paralog, ASP3-1, that arose from a segmental duplication","termid":"PBO:0082532"}


id: GO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1R,4R)-bornane-2,5-dione + FMNH2 + O2 = (1R,4R)-5-oxo-1,2-campholide + FMN + H+ + H2O.","definition_xrefs":["RHEA:34415","PMID:3944058","PMID:8515237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,5-diketocamphane 1,2-monooxygenase","secondary_identifiers":["UM-BBD_enzymeID:e0302","MetaCyc:R543-RXN","EC:1.14.14.108"],"synonyms":[{"name":"(+)-camphor,reduced-rubredoxin:oxygen oxidoreductase (1,2-lactonizing)","type":"related"},{"name":"2,5-diketocamphane lactonizing enzyme activity","type":"related"},{"name":"camphor 1,2-monooxygenase activity","type":"exact"},{"name":"camphor ketolactonase I activity","type":"related"}],"termid":"GO:0018684"}


id: PBO:0053172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"left-right determination factor 3, pseudogene","termid":"PBO:0053172"}


id: PBO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 1","termid":"PBO:0000072"}


id: GO:0097620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxy-2-phenylacetate + acceptor = phenylglyoxylate + reduced acceptor.","definition_xrefs":["PMID:1731758","RHEA:43112","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-mandelate dehydrogenase activity","synonyms":[{"name":"D-mandelate dehydrogenase activity","type":"exact"}],"termid":"GO:0097620"}


id: FYPO:0007320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased stress granule assembly during vegetative growth","synonyms":[{"name":"increased cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"increased stress granule assembly during mitotic cell cycle","type":"related"},{"name":"increased stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0007320"}


id: GO:0102785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: violaxanthin + 2 O2 = 2 5,6-epoxy-3-hydroxy-9-apo-beta-caroten-9-one + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["GOC:pz","PMID:11316814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"violaxanthin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7886"],"termid":"GO:0102785"}


id: PBO:0070921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 29","termid":"PBO:0070921"}


id: RO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_negatively_regulates","termid":"RO:0002630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_inhibits","termid":"RO:0002408"}


id: PBO:0074059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 37","termid":"PBO:0074059"}


id: PBO:0041862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 8","termid":"PBO:0041862"}


id: PBO:0004572
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PiF1 Helicase homolog","termid":"PBO:0004572"}


id: GO:0009866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by ethylene (ethene) involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induced systemic resistance, ethylene mediated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway (induced systemic resistance)","type":"exact"},{"name":"ethylene mediated signaling pathway (induced systemic resistance)","type":"exact"},{"name":"induced systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"induced systemic resistance, ethene mediated signalling pathway","type":"exact"},{"name":"induced systemic resistance, ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0009866"}


id: PBO:0017666
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Capping enzyme Triphosphatase","termid":"PBO:0017666"}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99179],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: FYPO:0005298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of oxidized DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal oxidized DNA binding","termid":"FYPO:0005298"}


id: GO:0005566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal RNA (obsolete GO:0005566)","synonyms":[{"name":"ribosomal RNA","type":"exact"}],"termid":"GO:0005566"}


id: PBO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb9","termid":"PBO:0002668"}


id: PBO:0080659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 3","termid":"PBO:0080659"}


id: GO:0071090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA2b-ITGB3-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071090"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: PBO:0064613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 3","termid":"PBO:0064613"}


id: PBO:0077799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 2 member A","termid":"PBO:0077799"}


id: PBO:0086180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for transcription of rDNA by RNA polymerase I; transcription factor independent of DNA template; involved in recruitment of RNA polymerase I to rDNA; structure reveals unique HEAT repeat fold and a surface serine patch; phosphorylation of serine patch impairs cell growth and reduces RNA polymerase I binding in vitro and RNA polymerase I recruitment to the rDNA gene in vivo","termid":"PBO:0086180"}


id: FYPO:0006085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intramolecular conversion of uridine to pseudouridine in an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0031120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal snRNA pseudouridylation","synonyms":[{"name":"normal snRNA pseudouridine synthesis","type":"exact"},{"name":"normal snRNA pseudouridylation during mitotic cell cycle","type":"related"},{"name":"normal snRNA pseudouridylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006085"}


id: PR:Q9USV7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A high affinity copper uptake protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.16","secondary_identifiers":["UniProtKB:Q9USV7"],"synonyms":[{"name":"SPBC23G7.16","type":"related"},{"name":"Spom972h-SLC31A1","type":"exact"},{"name":"copper transporter 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USV7"}


id: PBO:0084005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerophosphocholine (GroPCho) phosphodiesterase; hydrolyzes GroPCho to choline and glycerolphosphate, for use as a phosphate source and as a precursor for phosphocholine synthesis; may interact with ribosomes","termid":"PBO:0084005"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_02849","SJAG_03590","SJAG_01771","SJAG_03061","SJAG_03573","SJAG_02551","SJAG_05203","SJAG_00342","SJAG_01952","SJAG_02391","SJAG_03622","SJAG_00904","SJAG_05341","SJAG_00150","SJAG_04705","SJAG_00297","SJAG_04647","SJAG_04820","SJAG_00909","SJAG_04099","SJAG_01403","SJAG_02494"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83248,85436,86079,86380,89950,90059,90966,91445,94208,94557,97424,98842,99110,101432,101622,101754,104051,104079,104360,109925,110473,113981],"is_not":false,"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03061":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0060261":null}}


id: GO:0001934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of phosphorylation","termid":"GO:0042327"},{"relation_name":"positively_regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein phosphorylation","synonyms":[{"name":"activation of protein amino acid phosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid phosphorylation","type":"exact"},{"name":"stimulation of protein amino acid phosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid phosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid phosphorylation","type":"exact"},{"name":"upregulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001934"}


id: PR:O59855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein ssa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.13","synonyms":[{"name":"Spom972h-ssa2","type":"exact"}],"termid":"PR:O59855"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: GO:2000936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellotriose catabolic process","synonyms":[{"name":"regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000936"}


id: PBO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 1 polycomb repressive complex 2 subunit","termid":"PBO:0046786"}


id: GO:0071172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin + NADPH = tetrahydromonapterin + NADP+.","definition_xrefs":["GOC:imk","PMID:19897652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydromonapterin reductase activity","termid":"GO:0071172"}


id: GO:1902928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inulin.","definition_xrefs":["GOC:TermGenie","PMID:23104410","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan biosynthetic process","termid":"GO:0010146"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"inulin biosynthetic process","synonyms":[{"name":"inulin formation","type":"exact"},{"name":"inulin synthesis","type":"exact"},{"name":"inulin anabolism","type":"exact"},{"name":"inulin biosynthesis","type":"exact"}],"termid":"GO:1902928"}


id: PBO:0068442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 16, pseudogene","termid":"PBO:0068442"}


id: PBO:0059966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 11","termid":"PBO:0059966"}


id: PBO:0091929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase, unknown specificity","termid":"PBO:0091929"}


id: FYPO:0004245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein kinase activity during mitotic S phase during cellular response to DNA damage","synonyms":[{"name":"normal protein kinase activity during mitotic S phase in response to DNA damage","type":"related"}],"termid":"FYPO:0004245"}


id: PBO:0047666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fukutin","termid":"PBO:0047666"}


id: PBO:0027358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027358"}


id: FYPO:0007631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 12 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007631"}


id: PBO:0081507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 414","termid":"PBO:0081507"}


id: PBO:0067044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 63, pseudogene","termid":"PBO:0067044"}


id: GO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont transmembrane receptor-mediated cAMP signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transmembrane receptor-mediated cAMP signal transduction in response to host (obsolete GO:0075213)","synonyms":[{"name":"negative regulation of symbiont transmembrane receptor-mediated cAMP signal transduction in response to host","type":"exact"}],"termid":"GO:0075213"}


id: PBO:0066459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 12, pseudogene","termid":"PBO:0066459"}


id: PBO:0056289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesencephalic astrocyte derived neurotrophic factor","termid":"PBO:0056289"}


id: GO:0008623
data:
  {"annotated_genes":["SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70562],"is_not":false,"summary":null,"term":"GO:0008623"}]},"cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and additional small histone fold subunits (generally two of these, but Xenopus has only one and some additional non-conserved subunits). CHRAC plays roles in the regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["PMID:16568949","GOC:krc","PMID:21810179","PMID:9252192","PMID:15284901","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04879":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"CHRAC","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0016588"],"synonyms":[{"name":"ISW2 complex","type":"narrow"},{"name":"chromatin accessibility complex","type":"exact"}],"termid":"GO:0008623","terms_by_termid":{"GO:0008623":null}}


id: PBO:0044121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 7, pseudogene","termid":"PBO:0044121"}


id: GO:0044648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:jl","PMID:21875999"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 dimethylation (obsolete GO:0044648)","termid":"GO:0044648"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: PBO:0086369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aminopeptidase; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to the vacuole","termid":"PBO:0086369"}


id: PBO:0086423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase with a specific role in RNA pol II and polIII biogenesis; involved in the assembly and subsequent nuclear import of RNA polymerases II and III; required for establishment of sister chromatid cohesion; contains a Gly-Pro-Asn motif in the G domain; similar to Npa3p and Gpn3p; highly conserved across species and homologous to human gene GPN2/ATPBD1B","termid":"PBO:0086423"}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: PBO:0031070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spore_germination","termid":"PBO:0031070"}


id: PR:Q09174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gma12 gene.","definition_xrefs":["UniProtKB:Q09174","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.04c","synonyms":[{"name":"Spom972h-gma12","type":"exact"}],"termid":"PR:Q09174"}


id: PBO:0087834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol oxidase required for oxidative protein folding in the ER; essential for maintaining ER redox balance; feedback regulated via reduction and oxidation of regulatory bonds; reduced Pdi1p activates Ero1p by direct reduction of Ero1p regulatory bonds; depletion of thiol substrates and accumulation of oxidized Pdi1p results in inactivation of Ero1p by both Pdi1p-mediated oxidation and autonomous oxidation of Ero1p regulatory bonds; ero1-1 mutation complemented by human ERO1L","termid":"PBO:0087834"}


id: GO:0042662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell differentiation","termid":"GO:1905771"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate specification","synonyms":[{"name":"down regulation of mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of mesodermal cell fate specification","type":"exact"},{"name":"downregulation of mesodermal cell fate specification","type":"exact"},{"name":"inhibition of mesodermal cell fate specification","type":"narrow"},{"name":"suppression of mesodermal cell fate","type":"exact"}],"termid":"GO:0042662"}


id: GO:0106076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + lysine in peptide = CoA + N-succinyl-lysine-peptide.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide-lysine-N-succinyltransferase activity","termid":"GO:0106076"}


id: GO:0051405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the digestion of native collagen in the triple helical region at Xaa-Gly bonds.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete microbial collagenase activity (obsolete GO:0051405)","synonyms":[{"name":"Achromobacter iophagus collagenase","type":"related"},{"name":"Clostridium histolyticum collagenase activity","type":"narrow"},{"name":"Clostridium histolyticum proteinase A","type":"related"},{"name":"aspergillopeptidase C","type":"related"},{"name":"azocollase activity","type":"related"},{"name":"clostridiopeptidase A activity","type":"exact"},{"name":"clostridiopeptidase I","type":"related"},{"name":"clostridiopeptidase II","type":"related"},{"name":"collagen peptidase activity","type":"related"},{"name":"collagen protease activity","type":"related"},{"name":"collagenase 1 activity","type":"exact"},{"name":"collagenase A activity","type":"exact"},{"name":"collagenase I activity","type":"related"},{"name":"collagenase MMP-1","type":"related"},{"name":"kollaza","type":"related"},{"name":"matirx metalloproteinase-18","type":"related"},{"name":"matrix metalloproteinase-1","type":"related"},{"name":"matrix metalloproteinase-8","type":"related"},{"name":"metallocollagenase activity","type":"related"},{"name":"metalloproteinase-1","type":"related"},{"name":"microbial collagenase activity","type":"exact"},{"name":"nucleolysin","type":"related"},{"name":"soycollagestin","type":"related"}],"termid":"GO:0051405"}


id: GO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichloroaniline + 2 H+ + 2 e- = 4-chloroaniline + HCl.","definition_xrefs":["UM-BBD_reactionID:r0819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,4-dichloroaniline reductive dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034546"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: GO:0061255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular parietal epithelial cell. Mesonephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. These cells may also give rise to podocytes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular epithelial cell fate commitment","termid":"GO:0061252"},{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell fate commitment","termid":"GO:0072147"},{"relation_name":"part_of","term_name":"mesonephric glomerular parietal epithelial cell differentiation","termid":"GO:0061253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular parietal epithelial cell fate commitment","termid":"GO:0061255"}


id: PBO:0073957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 6","termid":"PBO:0073957"}


id: FYPO:0000856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome positioning","synonyms":[{"name":"normal nucleosome occupancy","type":"related"},{"name":"normal nucleosome positioning during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing","type":"exact"}],"termid":"FYPO:0000856"}


id: GO:1900884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane biosynthetic process","synonyms":[{"name":"regulation of tridecane anabolism","type":"exact"},{"name":"regulation of tridecane biosynthesis","type":"exact"},{"name":"regulation of tridecane formation","type":"exact"},{"name":"regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900884"}


id: GO:0039577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host JAK1 (Janus Kinase 1) activity by stopping, preventing or reducing tyrosine phosphorylation of JAK1 and thereby activation of JAK1.","definition_xrefs":["PMID:12620806"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host JAK1 activity by negative regulation of JAK1 phosphorylation (obsolete GO:0039577)","termid":"GO:0039577"}


id: GO:0035146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of specific branches of a tubular system to form a continuous network.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube fusion","termid":"GO:0035146"}


id: PBO:0052785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 24","termid":"PBO:0052785"}


id: GO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a T cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11911826","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated cytotoxicity","synonyms":[{"name":"T cell mediated cytolysis","type":"related"},{"name":"T cell mediated apoptosis","type":"exact"},{"name":"T cell mediated cell death","type":"exact"},{"name":"T cell mediated cell killing","type":"exact"},{"name":"T lymphocyte mediated cytotoxicity","type":"exact"},{"name":"T-cell mediated apoptosis","type":"exact"},{"name":"T-cell mediated cell death","type":"exact"},{"name":"T-cell mediated cell killing","type":"exact"},{"name":"T-cell mediated cytotoxicity","type":"exact"},{"name":"T-lymphocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001913"}


id: PBO:0001552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for activated protein Kinase of S. Pombe","termid":"PBO:0001552"}


id: PBO:0072275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 4","termid":"PBO:0072275"}


id: GO:0004075
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93900],"is_not":false,"summary":null,"term":"GO:0004075"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.","definition_xrefs":["EC:6.3.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"biotin carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BIOTIN-CARBOXYL-RXN","RHEA:13501"],"synonyms":[{"name":"biotin carboxylase (component of acetyl CoA carboxylase) activity","type":"related"},{"name":"biotin-carboxyl-carrier-protein:carbon-dioxide ligase (ADP-forming) activity","type":"related"}],"termid":"GO:0004075","terms_by_termid":{"GO:0004075":null}}


id: PBO:0039146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 3","termid":"PBO:0039146"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["GOC:mtg_muscle","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0062549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily N member 1 pseudogene","termid":"PBO:0062549"}


id: GO:0008569
data:
  {"annotated_genes":["SJAG_04745","SJAG_01546","SJAG_01613","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83557,90378,92347,94759],"is_not":false,"summary":null,"term":"GO:0008569"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule toward the minus end, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah","GOC:vw","PMID:15659646","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule motor activity","termid":"GO:0003777"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003774"}],"interesting_parent_ids":["GO:0003674","GO:0003774"],"is_obsolete":false,"name":"minus-end-directed microtubule motor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"ATP-dependent minus-end-directed microtubule motor activity","type":"exact"},{"name":"dynein ATPase","type":"narrow"},{"name":"kinesin ATP phosphohydrolase (minus-end-directed)","type":"narrow"},{"name":"microtubule motor activity, minus-end-directed","type":"exact"},{"name":"minus-end-directed ATP-dependent microtubule motor activity","type":"exact"},{"name":"minus-end-directed kinesin ATPase activity","type":"narrow"}],"termid":"GO:0008569","terms_by_termid":{"GO:0008569":null}}


id: SO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000793 engineered_DNA (obsolete SO:0000793)","termid":"SO:0000793"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_03683","SJAG_01837","SJAG_01775","SJAG_02346","SJAG_03220","SJAG_03217","SJAG_05319","SJAG_04508","SJAG_05266","SJAG_03926","SJAG_01371","SJAG_00418","SJAG_04259","SJAG_01211","SJAG_01805","SJAG_02731","SJAG_00918","SJAG_03437","SJAG_03327","SJAG_02814","SJAG_04076","SJAG_01224","SJAG_03989","SJAG_05220","SJAG_00678","SJAG_00794","SJAG_01278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89453,83658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[111829],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[104471,105606,111087,97893,105646,112055,93456,96004,94161,102863,103183,104215,86667,85470,90898,100870,105200,108460,91144,96821,109312,89434,109012,84889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: PBO:0040713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 antisense RNA 1","termid":"PBO:0040713"}


id: PR:Q10499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An apoptosis-inducing factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis-inducing factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.14c","secondary_identifiers":["UniProtKB:Q10499"],"synonyms":[{"name":"Spom972h-AIFM3","type":"exact"}],"termid":"PR:Q10499"}


id: GO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-22.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-22 binding","synonyms":[{"name":"IL-22 binding","type":"exact"}],"termid":"GO:0042017"}


id: PBO:0017797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet1","termid":"PBO:0017797"}


id: PATO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000924 relative enzyme function (obsolete PATO:0000924)","termid":"PATO:0000924"}


id: GO:0071725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triacylated bacterial lipopeptide stimulus.","definition_xrefs":["PMID:12524386","PMID:2757794","GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to triacyl bacterial lipopeptide","synonyms":[{"name":"response to triacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071725"}


id: GO:0016877
data:
  {"annotated_genes":["SJAG_02741","SJAG_03909","SJAG_02084","SJAG_03896","SJAG_00947","SJAG_01524","SJAG_03471","SJAG_03950","SJAG_03813","SJAG_00878","SJAG_02082","SJAG_05032","SJAG_00645","SJAG_00604","SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003987"},{"annotations":[73214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019778"},{"annotations":[73215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019779"},{"annotations":[76040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[108644,100990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[71533,78322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019781"},{"annotations":[100991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[110923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050203"},{"annotations":[100992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"},{"annotations":[71776,74918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004775"},{"annotations":[74844,91782,93309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019948"},{"annotations":[73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004839"},{"annotations":[87567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008641"},{"annotations":[74027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules via a carbon-sulfur bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.2.-.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00645":null,"SJAG_00853":null,"SJAG_00878":null,"SJAG_00947":null,"SJAG_01524":null,"SJAG_02082":null,"SJAG_02084":null,"SJAG_02741":null,"SJAG_03471":null,"SJAG_03813":null,"SJAG_03896":null,"SJAG_03909":null,"SJAG_03950":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming carbon-sulfur bonds","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ligase activity, forming carbon-sulphur bonds","type":"exact"}],"termid":"GO:0016877","terms_by_termid":{"GO:0003987":null,"GO:0004775":null,"GO:0004839":null,"GO:0008641":null,"GO:0019778":null,"GO:0019779":null,"GO:0019781":null,"GO:0019948":null,"GO:0031956":null,"GO:0042292":null,"GO:0050203":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:0047821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + H2O + O2 = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["EC:1.4.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino-acid oxidase activity","termid":"GO:0003884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-glutamate oxidase activity","secondary_identifiers":["KEGG_REACTION:R00279","RHEA:10028","MetaCyc:D-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"D-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"D-glutamic acid oxidase activity","type":"related"},{"name":"D-glutamic oxidase activity","type":"related"}],"termid":"GO:0047821"}


id: PBO:0091755
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELL","termid":"PBO:0091755"}


id: PBO:0005387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase (predicted)","termid":"PBO:0005387"}


id: PBO:0041297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4A","termid":"PBO:0041297"}


id: PBO:0045738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 1","termid":"PBO:0045738"}


id: GO:0015883
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The directed movement of flavin-adenine dinucleotide (FAD) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. FAD forms the coenzyme of the prosthetic group of various flavoprotein oxidoreductase enzymes, in which it functions as an electron acceptor by being reversibly converted to its reduced form.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"FAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"flavin adenine dinucleotide transport","type":"exact"},{"name":"flavin-adenine dinucleotide transport","type":"exact"}],"termid":"GO:0015883","terms_by_termid":{"GO:1990548":null}}


id: PBO:0087453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p; shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint","termid":"PBO:0087453"}


id: GO:0020028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hemoglobin into a cell by receptor-mediated endocytosis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"endocytic hemoglobin import into cell","synonyms":[{"name":"endocytic hemoglobin import","type":"related"},{"name":"haemoglobin uptake","type":"exact"},{"name":"hemoglobin uptake","type":"exact"}],"termid":"GO:0020028"}


id: GO:0007500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate determination","synonyms":[{"name":"mesoderm cell fate determination","type":"exact"}],"termid":"GO:0007500"}


id: FYPO:0007247
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur during a cellular response to ionizing radiation. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","GO:0007095","PMID:9042863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic G2 DNA damage checkpoint","termid":"FYPO:0004259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation","synonyms":[{"name":"abolished G2 DNA damage checkpoint during cellular response to ionizing radiation during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation during cellular response to ionizing radiation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to IR","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint during cellular response to ionizing radiation","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0007247"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: PBO:0067861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 163","termid":"PBO:0067861"}


id: FYPO:0006454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle","termid":"FYPO:0007863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle","synonyms":[{"name":"abnormal protein localisation to meiotic spindle","type":"exact"},{"name":"abnormal protein localization to spindle during meiosis","type":"exact"}],"termid":"FYPO:0006454"}


id: GO:0061625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructose into pyruvate through a fructose-1-phosphate intermediate, with the concomitant production of ATP and NADH.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose catabolic process","termid":"GO:0006001"},{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006091","GO:0005975","GO:0044281","GO:0008150","GO:0044248","GO:0055086"],"is_obsolete":false,"name":"glycolytic process through fructose-1-phosphate","termid":"GO:0061625"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: PBO:0051938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intelectin 2","termid":"PBO:0051938"}


id: FYPO:0005209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore","synonyms":[{"name":"abnormal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005209"}


id: GO:1901709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-larreatricin.","definition_xrefs":["GOC:TermGenie","PMID:12960376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-larreatricin metabolic process","synonyms":[{"name":"(+)-larreatricin metabolism","type":"exact"}],"termid":"GO:1901709"}


id: PBO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine hydrolase (predicted)","termid":"PBO:0005225"}


id: GO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism.","definition_xrefs":["GOC:add","PMID:16497589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oomycetes","termid":"GO:0002239"},{"relation_name":"is_a","term_name":"defense response to other organism","termid":"GO:0098542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to oomycetes","termid":"GO:0002229"}


id: PR:C6Y4B2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.15c gene.","definition_xrefs":["UniProtKB:C6Y4B2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.15c","synonyms":[{"name":"Spom972h-SPAC57A7.15c","type":"exact"}],"termid":"PR:C6Y4B2"}


id: PBO:0063266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 12","termid":"PBO:0063266"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: PR:000037083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8)*2","type":"exact"}],"termid":"PR:000037083"}


id: PBO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic septin Spn7","termid":"PBO:0018022"}


id: GO:0106397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["GOC:ha","PMID:22878552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of R7 cell fate commitment","termid":"GO:0106396"},{"relation_name":"positively_regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R7 cell fate commitment","termid":"GO:0106397"}


id: PBO:0051563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12B","termid":"PBO:0051563"}


id: PBO:0071686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 18","termid":"PBO:0071686"}


id: GO:1905307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["PMID:26108447","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to miconazole","termid":"GO:1905307"}


id: SO:1001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory region, the stem-loop secondary structural element is downstream of the redefined region.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_stem_loop_structure","synonyms":[{"name":"three prime stem loop structure","type":"exact"}],"termid":"SO:1001279"}


id: GO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucarate + chlorogenate = (-)-quinate + 2-O-caffeoylglucarate.","definition_xrefs":["RHEA:23204","EC:2.3.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"chlorogenate-glucarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.98-RXN","KEGG_REACTION:R02998"],"synonyms":[{"name":"chlorogenate:glucarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"chlorogenate:glucarate caffeoyltransferase activity","type":"related"},{"name":"chlorogenic acid:glucaric acid O-caffeoyltransferase activity","type":"related"}],"termid":"GO:0047204"}


id: PBO:0073030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secernin 3","termid":"PBO:0073030"}


id: GO:1900077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"},{"relation_name":"negatively_regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to insulin stimulus","synonyms":[{"name":"down regulation of cellular response to insulin stimulus","type":"exact"},{"name":"down-regulation of cellular response to insulin stimulus","type":"exact"},{"name":"downregulation of cellular response to insulin stimulus","type":"exact"},{"name":"inhibition of cellular response to insulin stimulus","type":"narrow"}],"termid":"GO:1900077"}


id: PBO:0051645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1","termid":"PBO:0051645"}


id: GO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic catabolic process","synonyms":[{"name":"antibiotic breakdown","type":"exact"},{"name":"antibiotic catabolism","type":"exact"},{"name":"antibiotic degradation","type":"exact"}],"termid":"GO:0017001"}


id: PBO:0052094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KBTBD11 overlapping transcript 1","termid":"PBO:0052094"}


id: GO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of a high voltage-gated calcium channel.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"generation of L-type calcium current","type":"related"}],"termid":"GO:0061577"}


id: FYPO:0000630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which biofilm formation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal biofilm formation","termid":"FYPO:0000630"}


id: PBO:0076320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNPO2L antisense RNA 1","termid":"PBO:0076320"}


id: GO:0090006
data:
  {"annotated_genes":["SJAG_04457","SJAG_03048","SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89506,105485],"is_not":false,"summary":null,"term":"GO:0090006"},{"annotations":[97847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element assembly. Linear element assembly is the cell cycle process in which a proteinaceous scaffold, related to the synaptonemal complex, is assembled in association with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of homologous chromosome segregation","termid":"GO:0060629"},{"relation_name":"regulates","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_03048":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of linear element assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090006","terms_by_termid":{"GO:0062123":null,"GO:0090006":null}}


id: PBO:0077469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 190","termid":"PBO:0077469"}


id: PBO:0071435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 41","termid":"PBO:0071435"}


id: GO:0085009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via Maurer's cleft. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from Maurer's cleft (obsolete GO:0085009)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from Maurers cleft","type":"exact"}],"termid":"GO:0085009"}


id: PBO:0076769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 7","termid":"PBO:0076769"}


id: GO:0140320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.","definition_xrefs":["PMID:20724636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor decoy activity","termid":"GO:0140319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"PAMP receptor decoy activity","synonyms":[{"name":"pathogen-associated molecular pattern receptor decoy activity","type":"exact"},{"name":"pattern recognition receptor decoy activity","type":"exact"}],"termid":"GO:0140320"}


id: PBO:0062582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 6","termid":"PBO:0062582"}


id: PBO:0059281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L39","termid":"PBO:0059281"}


id: PBO:0076972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 3","termid":"PBO:0076972"}


id: GO:0106246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.","definition_xrefs":["PMID:29932902","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exoribonuclease activity","termid":"GO:1901917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"}


id: PBO:0081929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 971, pseudogene","termid":"PBO:0081929"}


id: PBO:0042226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin T2 pseudogene 1","termid":"PBO:0042226"}


id: FYPO:0002125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002125"}


id: GO:0006673
data:
  {"annotated_genes":["SJAG_04913","SJAG_03015","SJAG_02168","SJAG_03953","SJAG_00506","SJAG_04878","SJAG_05311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73332,75440],"is_not":false,"summary":null,"term":"GO:0006673"},{"annotations":[74747,77997,90838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[107777,87457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inositol phosphoceramides, any lipid with a phosphodiester bridge between an inositol residue and the ceramide group.","definition_xrefs":["PMID:19726565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00506":null,"SJAG_02168":null,"SJAG_03015":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"inositol phosphoceramide metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006674"],"synonyms":[{"name":"inositol phosphorylceramide metabolic process","type":"exact"},{"name":"inositol phosphorylceramide metabolism","type":"exact"},{"name":"inositolphosphoceramide metabolism","type":"exact"}],"termid":"GO:0006673","terms_by_termid":{"GO:0006673":null,"GO:0006675":null,"GO:0051999":null}}


id: MOD:01182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD.","definition_xrefs":["RESID:AA0436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta1)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links)","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links, pros nitrogen)","type":"exact"},{"name":"CROSSLNK 6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD (His-Cys)","type":"exact"},{"name":"SCys6-NprosHis8a-FAD","type":"exact"}],"termid":"MOD:01182"}


id: GO:0050410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxolaurate + H+ = 2-undecanone + CO2.","definition_xrefs":["EC:4.1.1.56","RHEA:13385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-oxolaurate decarboxylase activity","secondary_identifiers":["MetaCyc:3-OXOLAURATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03747"],"synonyms":[{"name":"3-oxododecanoate carboxy-lyase (2-undecanone-forming)","type":"related"},{"name":"3-oxododecanoate carboxy-lyase activity","type":"related"},{"name":"beta-ketoacyl decarboxylase activity","type":"related"},{"name":"beta-ketolaurate decarboxylase activity","type":"related"}],"termid":"GO:0050410"}


id: GO:0086093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled acetylcholine receptor signaling pathway, which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signalling pathway involved in heart process","type":"exact"},{"name":"M2 receptor signaling pathway involved in heart process","type":"narrow"},{"name":"muscarinic receptor signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086093"}


id: PBO:0083002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2; recognizes and binds damaged DNA with Rad23p during nucleotide excision repair (NER); also involved with Rad23p in turnover of ubiquitylated proteins; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage; RAD4 and RAD51 pathways confer resistance to benzo[a]pyrene dihydrodiol","termid":"PBO:0083002"}


id: GO:2001234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of apoptotic signaling pathway","termid":"GO:2001233"},{"relation_name":"negatively_regulates","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic signaling pathway","synonyms":[{"name":"negative regulation of apoptotic signalling pathway","type":"exact"}],"termid":"GO:2001234"}


id: PBO:0088393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-ACP dehydratase Htd2","termid":"PBO:0088393"}


id: PBO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter","termid":"PBO:0110101"}


id: GO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the amine 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine, a serotonin receptor agonist that can act as a psychedelic drug.","definition_xrefs":["PMID:19057895","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding","synonyms":[{"name":"(+/-)2-(4-iodo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine binding","type":"exact"},{"name":"1-(4-iodo-2,5-dimethoxyphenyl)-2-aminopropane binding","type":"exact"},{"name":"4-iodo-2,5-dimethoxyphenylisopropylamine binding","type":"exact"}],"termid":"GO:0071886"}


id: PBO:0081208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 8","termid":"PBO:0081208"}


id: PBO:0070886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 18","termid":"PBO:0070886"}


id: FYPO:0002752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing L-methionine as the sole sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002058","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell population growth on methionine sulfur source","synonyms":[{"name":"abolished cell population growth on methionine sulphur source","type":"exact"},{"name":"abolished growth on methionine sulfur source","type":"broad"},{"name":"abolished methionine utilization","type":"related"},{"name":"abolished vegetative cell population growth on methionine sulfur source","type":"exact"},{"name":"cell population growth on methionine sulfur source abolished","type":"exact"},{"name":"inability to utilize methionine as sole sulphur source","type":"related"}],"termid":"FYPO:0002752"}


id: PBO:0091159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2","termid":"PBO:0091159"}


id: PBO:0067669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 849, pseudogene","termid":"PBO:0067669"}


id: PBO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3321 family","termid":"PBO:0000313"}


id: GO:0032645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045423"],"synonyms":[{"name":"regulation of GM-CSF production","type":"exact"},{"name":"regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032645"}


id: GO:0033560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydrofolate + NADP+ = folate + NADPH + H+.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"folate reductase activity","secondary_identifiers":["Reactome:R-HSA-197972","Reactome:R-HSA-197963","RHEA:31103","Reactome:R-HSA-9709098"],"termid":"GO:0033560"}


id: GO:0102069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-hydroxy-alpha-humulene + NAD = zerumbone + NADH + H+.","definition_xrefs":["GOC:pz","EC:1.1.1.326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"zerumbone synthase activity","secondary_identifiers":["MetaCyc:RXN-10629","RHEA:32327"],"termid":"GO:0102069"}


id: PBO:0048193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit beta 1","termid":"PBO:0048193"}


id: PBO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial morphology and distribution","termid":"PBO:0002611"}


id: PATO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of rate","termid":"PATO:0001586"}


id: PBO:0108593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG2 AAA ATPase homolog A","termid":"PBO:0108593"}


id: PBO:0005388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitchondrial inner membrane Cmc2 (predicted)","termid":"PBO:0005388"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: GO:0006698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or conformational alteration of ecdysone, resulting in a change in its properties.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ecdysone modification (obsolete GO:0006698)","synonyms":[{"name":"ecdysone modification","type":"exact"}],"termid":"GO:0006698"}


id: GO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an arylamine = UDP + an N-D-glucosylarylamine.","definition_xrefs":["EC:2.4.1.71","MetaCyc:ARYLAMINE-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arylamine glucosyltransferase activity","synonyms":[{"name":"UDP glucose-arylamine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-arylamine glucosyltransferase activity","type":"related"}],"termid":"GO:0047684"}


id: GO:0021836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that repel olfactory bulb interneurons from the subventricular zone as a component process in tangential migration.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative chemotaxis","termid":"GO:0050919"},{"relation_name":"part_of","term_name":"postnatal olfactory bulb interneuron migration","termid":"GO:0021827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion involved in postnatal olfactory bulb interneuron migration","synonyms":[{"name":"negative chemotaxis involved in postnatal olfactory bulb interneuron migration","type":"exact"}],"termid":"GO:0021836"}


id: PR:P87172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12526:SF37","OMA:SCHPO02799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.07","secondary_identifiers":["UniProtKB:P87172"],"synonyms":[{"name":"GlcNAc-PI synthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGA","type":"exact"}],"termid":"PR:P87172"}


id: PBO:0036265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-coenzyme A thioesterase","termid":"PBO:0036265"}


id: PBO:0074109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 1 (Augustine blood group)","termid":"PBO:0074109"}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: PR:000037503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 that is phosphorylated at two conserved SQ/TQ motifs in the N-terminal region. Example: UniProtKB:P87074-1, Thr-73, MOD:00047|Ser-80, MOD:00046.","definition_xrefs":["PMID:22792081","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos:(T73,S80)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 2 (Schizosaccharomyces pombe)","type":"related"},{"name":"Spom-rhp9/Phos:2","type":"exact"},{"name":"crb2/Phos:(T73,S80)","type":"exact"}],"termid":"PR:000037503"}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: GO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral nucleocapsid","secondary_identifiers":["GO:0019014"],"synonyms":[{"name":"core","type":"broad"},{"name":"nucleocapsid","type":"exact"}],"termid":"GO:0019013"}


id: GO:0102155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfonatolactate + NAD = 3-sulfonatopyruvate(2-) + NADH + H+.","definition_xrefs":["EC:1.1.1.310","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"S-sulfolactate dehydrogenase activity","secondary_identifiers":["RHEA:28194","MetaCyc:RXN-11689"],"termid":"GO:0102155"}


id: PATO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000741 high enzyme function value (obsolete PATO:0000741)","termid":"PATO:0000741"}


id: PBO:0046869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focally amplified long non-coding RNA in epithelial cancer","termid":"PBO:0046869"}


id: PATO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000565 volume value (obsolete PATO:0000565)","termid":"PATO:0000565"}


id: GO:0045330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an ester bond by a mechanism involving a catalytically active aspartic acid residue.","definition_xrefs":["UniProtKB-KW:KW-0063","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"aspartyl esterase activity","termid":"GO:0045330"}


id: GO:0046102
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"inosine metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"inosine metabolism","type":"exact"}],"termid":"GO:0046102","terms_by_termid":{"GO:0006190":null}}


id: GO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A blood microparticle that is derived from, and contains membrane receptors as well as other proteins characteristic of, an endothelial cell.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:16373184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle","termid":"GO:0072562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"endothelial microparticle","termid":"GO:0072563"}


id: PBO:0036043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036043"}


id: PBO:0031748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_centromeric_sister_chromatid_cohesion","termid":"PBO:0031748"}


id: FYPO:0002612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at subtelomeric regions. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H2A phosphorylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002612"}


id: GO:0018756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammeline + H2O = ammelide + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ammeline aminohydrolase activity","secondary_identifiers":["RHEA:26201","MetaCyc:RXN-8016"],"termid":"GO:0018756"}


id: FYPO:0000099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to canavanine. Cells stop growing (and may die) at a concentration of canavanine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to canavanine","synonyms":[{"name":"hypersensitive to canavanine","type":"exact"},{"name":"sensitive to canavanine during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine during vegetative growth","type":"exact"}],"termid":"FYPO:0000099"}


id: GO:0048845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of venous blood vessels are generated and organized. Veins are blood vessels that transport blood from the body and its organs to the heart.","definition_xrefs":["GOC:dsf","PMID:16740480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"part_of","term_name":"venous blood vessel development","termid":"GO:0060841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel morphogenesis","synonyms":[{"name":"vein morphogenesis","type":"broad"},{"name":"venous morphogenesis","type":"exact"}],"termid":"GO:0048845"}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","termid":"GO:0017187"}


id: PBO:0086010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified gene DIA3; identified by fungal homology and RT-PCR; mRNA identified as translated by ribosome profiling data","termid":"PBO:0086010"}


id: GO:0005313
data:
  {"annotated_genes":["SJAG_03256","SJAG_00522","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77890,92133,93767],"is_not":false,"summary":null,"term":"GO:0005313"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acidic amino acid transmembrane transporter activity","termid":"GO:0015172"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-glutamate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-428052","Reactome:R-HSA-210444","Reactome:R-HSA-5624256","RHEA:66336"],"synonyms":[{"name":"L-glutamate transporter activity","type":"broad"},{"name":"glutamate transmembrane transporter activity","type":"broad"},{"name":"glutamate/aspartate porter activity","type":"narrow"},{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"}],"termid":"GO:0005313","terms_by_termid":{"GO:0005313":null}}


id: GO:0010630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA by a mechanism that selects the start site along that template.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transcription, start site selection","termid":"GO:0010630"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: GO:0099177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"regulates","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling","termid":"GO:0099177"}


id: GO:0038172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-33 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-33-mediated signaling pathway","synonyms":[{"name":"IL-33-mediated signaling pathway","type":"exact"},{"name":"IL33 signaling pathway","type":"exact"},{"name":"interleukin-33 signaling pathway","type":"related"},{"name":"interleukin-33-mediated signalling pathway","type":"exact"}],"termid":"GO:0038172"}


id: PBO:0073191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T pseudogene 2","termid":"PBO:0073191"}


id: MOD:00234
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-glutathionyl-L-cysteine.","definition_xrefs":["ChEBI:21264","PubMed:3083866","PubMed:8344916","DeltaMass:0","OMSSA:51","RESID:AA0229","Unimod:55"],"direct_ancestors":[{"relation_name":"contains","term_name":"S-(cysteinyl-glycyl)-L-cysteine","termid":"MOD:02026"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine glutathione disulfide","synonyms":[{"name":"(2S)-2-amino-3-((2S)-2-((4R)-4-amino-4-carboxyl-1-oxobutyl)amino-3-(carboxylmethyl)amino-3-oxo-propyl)dithio-propanoic acid","type":"exact"},{"name":"Glutathionation","type":"exact"},{"name":"Glutathione","type":"related"},{"name":"L-cysteine glutathione disulfide","type":"exact"},{"name":"L-gamma-glutamyl-L-cysteinyl-glycine (2-1')-disulfide with L-cysteine","type":"exact"},{"name":"MOD_RES S-glutathionyl cysteine","type":"exact"},{"name":"N-(N-gamma-glutamyl-cystinyl)-glycine","type":"exact"},{"name":"SGltCys","type":"exact"},{"name":"cysteinyl glutathione","type":"exact"},{"name":"glutathione disulfide","type":"related"},{"name":"glutathionec","type":"exact"}],"termid":"MOD:00234"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: GO:0006337
data:
  {"annotated_genes":["SJAG_04038","SJAG_02314","SJAG_01653"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85785,92648,112041],"is_not":false,"summary":null,"term":"GO:0006337"}]},"cv_name":"biological_process","definition":"The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex disassembly","termid":"GO:0032986"},{"relation_name":"is_a","term_name":"nucleosome organization","termid":"GO:0034728"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01653":null,"SJAG_02314":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleosome disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006337","terms_by_termid":{"GO:0006337":null}}


id: PBO:0063468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDHA1 pseudogene 1","termid":"PBO:0063468"}


id: PBO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 41","termid":"PBO:0050339"}


id: GO:0003400
data:
  {"annotated_genes":["SJAG_04615","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64727,71471],"is_not":false,"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:jp","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"COPII vesicle coating","termid":"GO:0048208"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of COPII vesicle coating","references_by_uniquename":{"GO_REF:0000104":null,"PMID:21873635":null},"termid":"GO:0003400","terms_by_termid":{"GO:0003400":null}}


id: PBO:0056675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A","termid":"PBO:0056675"}


id: PBO:0006168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-happens_during","termid":"PBO:0006168"}


id: PBO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15a (predicted)","termid":"PBO:0000804"}


id: GO:0018292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a protein via L-cysteinyl molybdopterin.","definition_xrefs":["RESID:AA0142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"molybdenum incorporation into molybdenum-molybdopterin complex","termid":"GO:0018315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdenum incorporation via L-cysteinyl molybdopterin","termid":"GO:0018292"}


id: PBO:0025465
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentosuria","termid":"PBO:0025465"}


id: PBO:0012259
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staurosporine supersensitive","termid":"PBO:0012259"}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: PBO:0004427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein","termid":"PBO:0004427"}


id: PBO:0040085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase F","termid":"PBO:0040085"}


id: GO:0120215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of histidine biosynthetic process","synonyms":[{"name":"activation of histidine anabolism","type":"narrow"},{"name":"activation of histidine biosynthesis","type":"narrow"},{"name":"activation of histidine biosynthetic process","type":"narrow"},{"name":"activation of histidine formation","type":"narrow"},{"name":"activation of histidine synthesis","type":"narrow"},{"name":"positive regulation of histidine anabolism","type":"exact"},{"name":"positive regulation of histidine biosynthesis","type":"exact"},{"name":"positive regulation of histidine formation","type":"exact"},{"name":"positive regulation of histidine synthesis","type":"exact"},{"name":"up regulation of histidine anabolism","type":"exact"},{"name":"up regulation of histidine biosynthesis","type":"exact"},{"name":"up regulation of histidine biosynthetic process","type":"exact"},{"name":"up regulation of histidine formation","type":"exact"},{"name":"up regulation of histidine synthesis","type":"exact"},{"name":"up-regulation of histidine anabolism","type":"exact"},{"name":"up-regulation of histidine biosynthesis","type":"exact"},{"name":"up-regulation of histidine biosynthetic process","type":"exact"},{"name":"up-regulation of histidine formation","type":"exact"},{"name":"up-regulation of histidine synthesis","type":"exact"},{"name":"upregulation of histidine anabolism","type":"exact"},{"name":"upregulation of histidine biosynthesis","type":"exact"},{"name":"upregulation of histidine biosynthetic process","type":"exact"},{"name":"upregulation of histidine formation","type":"exact"},{"name":"upregulation of histidine synthesis","type":"exact"}],"termid":"GO:0120215"}


id: PR:O59771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UMP-CMP kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23359:SF23","PRO:DNx","OMA:SCHPO04532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.05c","secondary_identifiers":["UniProtKB:O59771"],"synonyms":[{"name":"ATP:UMP phosphotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CMPK1","type":"exact"},{"name":"UK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UMPK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dCMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"deoxycytidylate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"uridine monophosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59771"}


id: GO:0008486
data:
  {"annotated_genes":["SJAG_00244","SJAG_01154","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77865],"is_not":false,"summary":null,"term":"GO:0008486"},{"annotations":[110249,100586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[100587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"},{"annotations":[100588,110250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[100589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"},{"annotations":[100590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106211"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol polyphosphate + H2O = 1D-myo-inositol polyphosphate + phosphate.","definition_xrefs":["EC:3.6.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"diphosphoinositol-polyphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:3.6.1.52-RXN","KEGG_REACTION:R05777"],"synonyms":[{"name":"DIPP activity","type":"related"},{"name":"diphospho-myo-inositol-polyphosphate diphosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol polyphosphate phosphohydrolase activity","type":"exact"},{"name":"diphosphoinositol-polyphosphate phosphohydrolase activity","type":"exact"}],"termid":"GO:0008486","terms_by_termid":{"GO:0008486":null,"GO:0052843":null,"GO:0052845":null,"GO:0052846":null,"GO:0052847":null,"GO:0106211":null}}


id: PBO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 19","termid":"PBO:0070520"}


id: PBO:0040459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase cation transporting 13A2","termid":"PBO:0040459"}


id: GO:0044247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides, polymers of many (typically more than 10) monosaccharide residues linked glycosidically, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular polysaccharide catabolic process (obsolete GO:0044247)","synonyms":[{"name":"cellular polysaccharide breakdown","type":"exact"},{"name":"cellular polysaccharide catabolism","type":"exact"},{"name":"cellular polysaccharide degradation","type":"exact"}],"termid":"GO:0044247"}


id: GO:2000111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of macrophage apoptotic process","termid":"GO:2000109"},{"relation_name":"positively_regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage apoptotic process","synonyms":[{"name":"positive regulation of AICD","type":"related"},{"name":"positive regulation of activation-induced cell death","type":"related"},{"name":"positive regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000111"}


id: SO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed transcript that does not contain a CDS that fullfills annotation criteria and not necessarily functionally non-coding.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene_processed_transcript","termid":"SO:0002111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_pseudogene_processed_transcript","synonyms":[{"name":"polymorphic pseudogene processed transcript","type":"exact"}],"termid":"SO:0002116"}


id: PBO:0034233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-simultaneous_with","termid":"PBO:0034233"}


id: FYPO:0002530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleoplasm","synonyms":[{"name":"decreased protein localisation to nucleoplasm","type":"exact"},{"name":"decreased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002530"}


id: GO:0036372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an opsin (a G protein-coupled receptor of photoreceptor cells) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:atm","PMID:20238016","PMID:22855808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"opsin transport","synonyms":[{"name":"ciliary transport of opsin","type":"narrow"}],"termid":"GO:0036372"}


id: PBO:0056001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056001"}


id: GO:1902487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a non-growing cell tip.","definition_xrefs":["PMID:23041194","PMID:21652630","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to non-growing cell tip","synonyms":[{"name":"protein localisation in non-growing cell tip","type":"exact"},{"name":"protein localisation to non-growing cell tip","type":"exact"},{"name":"protein localization in non-growing cell tip","type":"exact"}],"termid":"GO:1902487"}


id: PBO:0028914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028914"}


id: GO:0062012
data:
  {"annotated_genes":["SJAG_01187","SJAG_03130","SJAG_01672","SJAG_02406","SJAG_01307","SJAG_04422","SJAG_02380","SJAG_04018","SJAG_05314","SJAG_00685","SJAG_05006","SJAG_02104","SJAG_03538","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[71060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[72769,75445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[106632,110643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[92145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[84784,108906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[84934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[75068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101227,84329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[113093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"},{"annotations":[75448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a small molecule metabolic process.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01672":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_03130":null,"SJAG_03538":null,"SJAG_04018":null,"SJAG_04422":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of small molecule metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of small molecule metabolism","type":"exact"}],"termid":"GO:0062012","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0043456":null,"GO:0045540":null,"GO:0045717":null,"GO:0045820":null,"GO:0070452":null,"GO:0090180":null,"GO:1904775":null,"GO:1905706":null,"GO:1905857":null,"GO:2001172":null,"GO:2001211":null}}


id: PBO:0076194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 3","termid":"PBO:0076194"}


id: PBO:0057726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-10","termid":"PBO:0057726"}


id: PBO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control (predicted)","termid":"PBO:0005330"}


id: GO:0034851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + CoASH = pivalyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2,4,4-trimethyl-3-oxopentanoyl-CoA 2-C-propanoyl transferase activity","termid":"GO:0034851"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: GO:0016460
data:
  {"annotated_genes":["SJAG_00228","SJAG_01665","SJAG_02431","SJAG_04781","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71744,72461,78571,93196,112969],"is_not":false,"summary":null,"term":"GO:0016460"}]},"cv_name":"cellular_component","definition":"A myosin complex containing two class II myosin heavy chains, two myosin essential light chains and two myosin regulatory light chains. Also known as classical myosin or conventional myosin, the myosin II class includes the major muscle myosin of vertebrate and invertebrate muscle, and is characterized by alpha-helical coiled coil tails that self assemble to form a variety of filament structures.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_01665":null,"SJAG_02431":null,"SJAG_03703":null,"SJAG_04781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin II complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"conventional myosin","type":"related"}],"termid":"GO:0016460","terms_by_termid":{"GO:0016460":null}}


id: PBO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl leukotriene receptor 1","termid":"PBO:0044500"}


id: FYPO:0003030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content and polypyrimidine tracts located approximately 17-19 nt distal to the branch site.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased splicing of mRNA introns with low A/U content","termid":"FYPO:0003242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"}],"termid":"FYPO:0003030"}


id: GO:0060717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a chorion from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The chorion is an extraembryonic membrane.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion development","termid":"GO:0060717"}


id: PBO:0076945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor","termid":"PBO:0076945"}


id: RO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_at_point","termid":"RO:0002593"}


id: PBO:0048085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 6","termid":"PBO:0048085"}


id: GO:0043627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estrogen","synonyms":[{"name":"response to 17alpha-ethynylestradiol","type":"related"},{"name":"response to estrogen stimulus","type":"exact"},{"name":"response to oestrogen stimulus","type":"exact"}],"termid":"GO:0043627"}


id: FYPO:0003806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on non-fermentable carbon source","termid":"FYPO:0003805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0002060","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"abolished cell population growth on non-fermentable carbon source","synonyms":[{"name":"abolished growth on non-fermentable carbon source","type":"broad"},{"name":"abolished non-fermentable carbon source utilization","type":"related"},{"name":"abolished vegetative cell population growth on non-fermentable carbon source","type":"exact"},{"name":"cell population growth on non-fermentable carbon source abolished","type":"exact"}],"termid":"FYPO:0003806"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: PBO:0066070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor gamma","termid":"PBO:0066070"}


id: PBO:0047480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 7","termid":"PBO:0047480"}


id: PBO:0053507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 491","termid":"PBO:0053507"}


id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: PR:Q9P7N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TP53-regulating kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12209:SF0","OMA:SCHPO00656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit SPAP27G11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.07c","secondary_identifiers":["UniProtKB:Q9P7N1"],"synonyms":[{"name":"Spom972h-TP53RK","type":"exact"},{"name":"atypical serine/threonine protein kinase BUD32 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N1"}


id: PBO:0075987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAU2 pseudogene 1","termid":"PBO:0075987"}


id: GO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid phytoalexin metabolic process","synonyms":[{"name":"isoflavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046289"}


id: PBO:0109090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 4","termid":"PBO:0109090"}


id: GO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to plasma membrane raft","termid":"GO:0044860"},{"relation_name":"is_a","term_name":"protein insertion into membrane raft","termid":"GO:0071210"},{"relation_name":"is_a","term_name":"protein insertion into plasma membrane","termid":"GO:0098737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"protein insertion into plasma membrane raft","termid":"GO:0044859"}


id: PBO:0089583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Ell1","termid":"PBO:0089583"}


id: GO:0002634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of germinal center formation","termid":"GO:0002634"}


id: GO:0098039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process of transposition in which the existing element is replicated and one of the copies is excised and integrated at a new target site. Also referred to as copy-and-paste transposition.","definition_xrefs":["PMID:1660177","PMID:10540284","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA transposition","termid":"GO:0006313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"replicative DNA transposition","synonyms":[{"name":"copy-and-paste transposition","type":"exact"},{"name":"replicative transposition, DNA-mediated","type":"exact"},{"name":"transpositional DNA genome replication","type":"exact"}],"termid":"GO:0098039"}


id: PBO:0012851
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.4.1","termid":"PBO:0012851"}


id: GO:0030836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"positive regulation of actin filament depolymerization","secondary_identifiers":["GO:0030045"],"synonyms":[{"name":"actin filament destabilization","type":"exact"},{"name":"activation of actin filament depolymerization","type":"narrow"},{"name":"positive regulation of actin depolymerization","type":"exact"},{"name":"positive regulation of actin polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of actin filament depolymerization","type":"narrow"},{"name":"up regulation of actin filament depolymerization","type":"exact"},{"name":"up-regulation of actin filament depolymerization","type":"exact"},{"name":"upregulation of actin filament depolymerization","type":"exact"}],"termid":"GO:0030836"}


id: PBO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein NES","termid":"PBO:0001411"}


id: GO:0036469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + H+ = CO2 + tryptamine.","definition_xrefs":["RHEA:30339","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-L-amino-acid decarboxylase activity","termid":"GO:0004058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-tryptophan decarboxylase activity","secondary_identifiers":["EC:4.1.1.105"],"termid":"GO:0036469"}


id: GO:0004262
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity, and of BZ-Arg-OET > Ac-Tyr-OET. Does not hydrolyze peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cerevisin activity (obsolete GO:0004262)","synonyms":[{"name":"baker's yeast proteinase B","type":"related"},{"name":"brewer's yeast proteinase","type":"narrow"},{"name":"cerevisin activity","type":"exact"},{"name":"peptidase beta","type":"related"},{"name":"proteinase yscB activity","type":"narrow"},{"name":"yeast proteinase B activity","type":"narrow"}],"termid":"GO:0004262"}


id: PBO:0031503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_actinomycin_D","termid":"PBO:0031503"}


id: PBO:0075576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN4 antisense RNA 1","termid":"PBO:0075576"}


id: PBO:0048171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 1","termid":"PBO:0048171"}


id: GO:0048143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of an astrocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:10526094","PMID:9585813","GOC:mgi_curators","PMID:12529254","PMID:10695728","PMID:12580336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell activation","termid":"GO:0061900"},{"relation_name":"part_of","term_name":"astrocyte development","termid":"GO:0014002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte activation","termid":"GO:0048143"}


id: GO:2000971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of detection of glucose.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of detection of glucose","termid":"GO:2000970"},{"relation_name":"negatively_regulates","term_name":"detection of glucose","termid":"GO:0051594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of detection of glucose","synonyms":[{"name":"negative regulation of glucose detection","type":"exact"},{"name":"negative regulation of glucose perception","type":"related"},{"name":"negative regulation of glucose sensing","type":"related"}],"termid":"GO:2000971"}


id: PBO:0050217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 34","termid":"PBO:0050217"}


id: FYPO:0007412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of the mitotic spindle is normal (i.e. indistinguishable from wild type, parallel with the long axis of the cell).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle orientation","termid":"FYPO:0007412"}


