# terms

id: PBO:0088258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER transmembrane protein, DUF423 family protein, human TMEM256 ortholog, implicated in lipid metabolism or membrane organization","termid":"PBO:0088258"}


id: FYPO:0005528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of chromatin knobs in subtelomeric regions is decreased. Chromatin knobs are highly condensed chromatin bodies formed from subtelomeric heterochromatin (observed on chromosomes 1 and 2).","definition_xrefs":["PMID:26205977","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased subtelomeric chromatin knob formation","synonyms":[{"name":"decreased frequency of knob-containing nuclei","type":"related"},{"name":"decreased subtelomeric chromatin condensation","type":"broad"},{"name":"decreased subtelomeric chromatin knob assembly","type":"exact"},{"name":"reduced subtelomeric chromatin knob formation","type":"exact"}],"termid":"FYPO:0005528"}


id: PBO:0069602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 879, pseudogene","termid":"PBO:0069602"}


id: PBO:0058783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7152","termid":"PBO:0058783"}


id: GO:0008888
data:
  {"annotated_genes":["SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84371],"is_not":false,"summary":null,"term":"GO:0008888"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NAD+ = glycerone + H+ + NADH.","definition_xrefs":["EC:1.1.1.6","RHEA:13769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol dehydrogenase [NAD(P)+] activity","termid":"GO:1990042"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerol dehydrogenase [NAD+] activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01034","MetaCyc:GLYCDEH-RXN"],"synonyms":[{"name":"NAD-linked glycerol dehydrogenase activity","type":"related"},{"name":"glycerol dehydrogenase activity","type":"broad"}],"termid":"GO:0008888","terms_by_termid":{"GO:0008888":null}}


id: PBO:0078305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-10","termid":"PBO:0078305"}


id: GO:0061073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ciliary body morphogenesis","termid":"GO:0061073"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","PMID:9407036","GOC:dgf","PMID:9407035","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: PBO:0088056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin protease cofactor; forms deubiquitination complex with Ubp3p that coregulates anterograde and retrograde transport between the ER and Golgi compartments, deubiquitinating COPII and COPI vesicle coat constituents, Sec23p and Sec27p; involved along with Ubp3p in the steady-state retention of Golgi membrane proteins, such as glycosyltransferases; null is sensitive to brefeldin A","termid":"PBO:0088056"}


id: SO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases transcript stability with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_stability_variant","termid":"SO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_transcript_stability_variant","synonyms":[{"name":"decrease transcript stability variant","type":"exact"}],"termid":"SO:0001547"}


id: GO:0019830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cadmium sensitivity/resistance (obsolete GO:0019830)","synonyms":[{"name":"cadmium sensitivity/resistance","type":"exact"}],"termid":"GO:0019830"}


id: PBO:0075717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin pseudogene 1","termid":"PBO:0075717"}


id: PBO:0017452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mereotopologically_related_to","termid":"PBO:0017452"}


id: PBO:0069064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 311, pseudogene","termid":"PBO:0069064"}


id: PBO:0027170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_microtubule_minus-end","termid":"PBO:0027170"}


id: GO:0007119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unlocalized bud growth such that the entire surface of the bud expands evenly, in a cell that reproduces by budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"budding cell bud growth","termid":"GO:0007117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"budding cell isotropic bud growth","synonyms":[{"name":"isotropic bud growth","type":"broad"}],"termid":"GO:0007119"}


id: PBO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 26","termid":"PBO:0070796"}


id: PBO:0048780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 11","termid":"PBO:0048780"}


id: PBO:0060259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid derived growth factor","termid":"PBO:0060259"}


id: GO:0042822
data:
  {"annotated_genes":["SJAG_00283","SJAG_00252","SJAG_00691","SJAG_00707","SJAG_01881","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[74640,76934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[83516,74730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridoxal phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"active vitamin B6 metabolic process","type":"exact"},{"name":"active vitamin B6 metabolism","type":"exact"},{"name":"pyridoxal phosphate metabolism","type":"exact"}],"termid":"GO:0042822","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: FYPO:0004298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide 5'-phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"}


id: PBO:0030764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_copper_ion","termid":"PBO:0030764"}


id: PBO:0027860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_DNA_damage","termid":"PBO:0027860"}


id: GO:0008227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular amine and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled amine receptor activity","synonyms":[{"name":"biogenic amine receptor","type":"narrow"},{"name":"G-protein coupled amine receptor activity","type":"exact"},{"name":"amine receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0008227"}


id: GO:0045067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing extrathymically maturing T cells which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["ISBN:0781735149","PMID:7880383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive T cell selection","termid":"GO:0043368"},{"relation_name":"is_a","term_name":"extrathymic T cell selection","termid":"GO:0045062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive extrathymic T cell selection","synonyms":[{"name":"positive extrathymic T lymphocyte selection","type":"exact"},{"name":"positive extrathymic T-cell selection","type":"exact"},{"name":"positive extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045067"}


id: PBO:0069320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 578, pseudogene","termid":"PBO:0069320"}


id: PBO:0078826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (AGG) 3-1","termid":"PBO:0078826"}


id: FYPO:0006979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular coenzyme Q10 level","synonyms":[{"name":"increased cellular UQ10 level","type":"exact"},{"name":"increased cellular coenzyme Q10 level during mitotic cell cycle","type":"related"},{"name":"increased cellular coenzyme Q10 level during vegetative growth","type":"exact"},{"name":"increased cellular ubiquinone 10 level","type":"exact"}],"termid":"FYPO:0006979"}


id: PBO:0052300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ketohexokinase","termid":"PBO:0052300"}


id: GO:0060308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of GTP cyclohydrolase I. GTP cyclohydrolase I activity catalyzes the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"GTP cyclohydrolase I regulator activity","termid":"GO:0060308"}


id: PBO:0072628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 3","termid":"PBO:0072628"}


id: GO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form peptidyl-N6-formyl-L-lysine.","definition_xrefs":["RESID:AA0211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein formylation","termid":"GO:0018256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine formylation","termid":"GO:0018257"}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: PBO:0082196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoate permease; ureidosuccinate permease; also transports dipeptides, though with lower affinity than for allantoate and ureidosuccinate; expression is constitutive but sensitive to nitrogen catabolite repression","termid":"PBO:0082196"}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: GO:0006200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP catabolic process (obsolete GO:0006200)","secondary_identifiers":["Wikipedia:ATP_hydrolysis"],"synonyms":[{"name":"ATP breakdown","type":"exact"},{"name":"ATP catabolism","type":"exact"},{"name":"ATP degradation","type":"exact"},{"name":"ATP hydrolysis","type":"narrow"}],"termid":"GO:0006200"}


id: GO:0106323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + NADPH+= + H+ + O2 = NADP+ + H2O + (4S)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-limonene 1,2-monooxygenase activity","termid":"GO:0052601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-limonene 1,2-monooxygenase NADPH activity","termid":"GO:0106323"}


id: GO:0102273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathionate + L-gamma-glutamyl-L-cysteinyl-beta-alaninate = gamma-Glu-Cys-gamma-Glu-Cys-beta-Ala + glycine.","definition_xrefs":["GOC:pz","EC:2.3.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"homophytochelatin synthase (dimmer forming) activity","secondary_identifiers":["MetaCyc:RXN-12529"],"termid":"GO:0102273"}


id: GO:1903187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vitellogenesis.","definition_xrefs":["PMID:19467235","GOC:mr","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of vitellogenesis","termid":"GO:1903186"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vitellogenesis","synonyms":[{"name":"down regulation of vitellogenesis","type":"exact"},{"name":"down regulation of yolk production","type":"exact"},{"name":"down-regulation of vitellogenesis","type":"exact"},{"name":"down-regulation of yolk production","type":"exact"},{"name":"downregulation of vitellogenesis","type":"exact"},{"name":"downregulation of yolk production","type":"exact"},{"name":"inhibition of vitellogenesis","type":"narrow"},{"name":"inhibition of yolk production","type":"narrow"},{"name":"negative regulation of yolk production","type":"exact"}],"termid":"GO:1903187"}


id: GO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two cell adhesion molecules, a protocadherin-alpha and a protocadherin-gamma, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}


id: PBO:0042298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD7 molecule","termid":"PBO:0042298"}


id: PBO:0053457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 410","termid":"PBO:0053457"}


id: RO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'expressed in'","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expresses","termid":"RO:0002292"}


id: PBO:0058449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5088","termid":"PBO:0058449"}


id: PBO:0057622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1185-2","termid":"PBO:0057622"}


id: GO:0120288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of intramembrane cleaving aspartic-type endopeptidase activity.","definition_xrefs":["PMID:32616437","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic endopeptidase activity, intramembrane cleaving (obsolete GO:0120288)","termid":"GO:0120288"}


id: GO:0090140
data:
  {"annotated_genes":["SJAG_04203","SJAG_01458","SJAG_01212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111466,98897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[104208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_01458":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090140","terms_by_termid":{"GO:0090141":null,"GO:0090258":null}}


id: GO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceeding septation.","definition_xrefs":["PMID:12094232","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart looping","synonyms":[{"name":"cardiac looping","type":"exact"}],"termid":"GO:0001947"}


id: GO:0008277
data:
  {"annotated_genes":["SJAG_02426","SJAG_02481","SJAG_00266","SJAG_02311","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87732,95926,103320,111546,88386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of GPCR protein signaling pathway","type":"exact"},{"name":"regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0008277","terms_by_termid":{"GO:0110034":null}}


id: PBO:0069721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1001, pseudogene","termid":"PBO:0069721"}


id: FYPO:0006715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002403","FYPO:0005447"],"is_obsolete":false,"name":"large and small daughter nuclei","synonyms":[{"name":"large and small daughter nuclei during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0006715"}


id: GO:0008709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NAD+ = 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanate + H+ + NADH.","definition_xrefs":["EC:1.1.1.159","RHEA:19409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholate 7-alpha-dehydrogenase activity","secondary_identifiers":["MetaCyc:7-ALPHA-HYDROXYSTEROID-DEH-RXN","KEGG_REACTION:R02792"],"synonyms":[{"name":"7-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-HSDH","type":"related"},{"name":"7alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"7alpha-hydroxysteroid:NAD+ 7-oxidoreductase activity","type":"broad"}],"termid":"GO:0008709"}


id: GO:0007232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a Sho1 osmosensor system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"osmosensory signaling pathway via Sho1 osmosensor","synonyms":[{"name":"osmosensory signalling pathway via Sho1 osmosensor","type":"exact"},{"name":"signal transduction during osmotic stress via Sho1 osmosensor","type":"exact"}],"termid":"GO:0007232"}


id: PBO:0075719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRI antisense RNA 1","termid":"PBO:0075719"}


id: GO:0004299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at peptide bonds with very broad specificity.","definition_xrefs":["EC:3.4.25.1"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase activity (obsolete GO:0004299)","synonyms":[{"name":"multicatalytic endopeptidase","type":"related"},{"name":"proteasome","type":"related"},{"name":"proteasome endopeptidase activity","type":"exact"},{"name":"proteasome endopeptidase complex","type":"related"}],"termid":"GO:0004299"}


id: FYPO:0002365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H4 acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"},{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H4 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002365"}


id: GO:0047390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycero-3-phosphocholine + H2O = choline phosphate + glycerol + H+.","definition_xrefs":["EC:3.1.4.38","RHEA:19545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycerophosphocholine cholinephosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02591","MetaCyc:3.1.4.38-RXN","Reactome:R-HSA-6814797"],"synonyms":[{"name":"L-3-glycerylphosphinicocholine cholinephosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phosphocholine cholinephosphohydrolase activity","type":"related"}],"termid":"GO:0047390"}


id: PBO:0041913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 1 precursor","termid":"PBO:0041913"}


id: GO:1990074
data:
  {"annotated_genes":["SJAG_02370","SJAG_03876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91209],"is_not":false,"summary":null,"term":"GO:1990074"},{"annotations":[87324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end of the target mRNA.","definition_xrefs":["GOC:vw","PMID:23503588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"polyuridylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990074","terms_by_termid":{"GO:0036450":null,"GO:1990074":null}}


id: PBO:0076032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 32A","termid":"PBO:0076032"}


id: FYPO:0008083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal reticulophagy","termid":"FYPO:0008083"}


id: PBO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-49","termid":"PBO:0051166"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71618],"is_not":false,"summary":null,"term":"GO:0005371"},{"annotations":[72438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0005371":null,"GO:0071913":null}}


id: PBO:0069774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1057, pseudogene","termid":"PBO:0069774"}


id: PBO:0073775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC4A8 antisense RNA 1","termid":"PBO:0073775"}


id: GO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of nicotinamide mononucleotide into, out of or within a cell, or between cells. Nicotinamide mononucleotide is a ribonucleotide in which the nitrogenous base, nicotinamide, is in beta-n-glycosidic linkage with the c-1 position of d-ribose. It is a constituent of NAD and NADP.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nicotinamide mononucleotide transmembrane transporter activity","secondary_identifiers":["GO:0015664"],"synonyms":[{"name":"nicotinamide mononucleotide permease activity","type":"related"},{"name":"nicotinamide ribonucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0015663"}


id: PR:Q9HDW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.15","synonyms":[{"name":"Spom972h-tfb5","type":"exact"},{"name":"TFIIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"general transcription and DNA repair factor IIH subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW3"}


id: GO:0141135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a chemokine signaling pathway, a G protein-coupled receptor signal transduction pathway activated by a chemokine. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16581912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host G protein-coupled receptor signal transduction","termid":"GO:0075120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host chemokine signal transduction pathway","termid":"GO:0141135"}


id: PBO:0063721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor","termid":"PBO:0063721"}


id: PBO:0081953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 4","termid":"PBO:0081953"}


id: PBO:0065375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 3","termid":"PBO:0065375"}


id: PBO:0004601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp16 (predicted)","termid":"PBO:0004601"}


id: GO:0032084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of type I site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type I restriction enzyme regulator","type":"related"}],"termid":"GO:0032084"}


id: MOD:00783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-arginine residue with two methyl groups.","definition_xrefs":["OMSSA:37","Unimod:36#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"methylated arginine","termid":"MOD:00658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylated L-arginine","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"NNMe2Arg","type":"exact"},{"name":"dimethylr","type":"exact"}],"termid":"MOD:00783"}


id: PBO:0040397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit F","termid":"PBO:0040397"}


id: PBO:0082590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi localized protein involved in ER to Golgi transport; forms a complex with the mammalian GRASP65 homolog, Grh1p; mutants are compromised for the fusion of ER-derived vesicles with Golgi membranes","termid":"PBO:0082590"}


id: PBO:0067299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 384, pseudogene","termid":"PBO:0067299"}


id: PBO:0081996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 29","termid":"PBO:0081996"}


id: PBO:0067926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 228","termid":"PBO:0067926"}


id: PR:Q9UTB0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC25B8.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilute domain-containing protein C25B8.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.08","synonyms":[{"name":"Spom972h-SPAC25B8.08","type":"exact"}],"termid":"PR:Q9UTB0"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: PBO:0083433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YIL060W","termid":"PBO:0083433"}


id: PBO:0053612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 648","termid":"PBO:0053612"}


id: GO:0099527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the postsynapse to the nucleus via cytoskeletal transport of a protein from a postsynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["PMID:24317321","GOC:dos","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"postsynapse to nucleus signaling pathway","synonyms":[{"name":"postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099527"}


id: PATO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000003 assay (obsolete PATO:0000003)","termid":"PATO:0000003"}


id: PBO:0049593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 11","termid":"PBO:0049593"}


id: PBO:0063402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 1","termid":"PBO:0063402"}


id: GO:0071540
data:
  {"annotated_genes":["SJAG_02995","SJAG_03147","SJAG_02376","SJAG_02164","SJAG_04744","SJAG_02628","SJAG_04981","SJAG_03472"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74558,90386,93279,93338,94458,100997,105981,106597],"is_not":false,"summary":null,"term":"GO:0071540"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3e.","definition_xrefs":["PMID:19061185","PMID:15904532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":8,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02376":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3e","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"eIF3e-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071540","terms_by_termid":{"GO:0071540":null}}


id: PBO:0051297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-32 (pseudogene)","termid":"PBO:0051297"}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["RHEA:23316","EC:1.14.11.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.10-RXN","KEGG_REACTION:R02486"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0039814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 5","termid":"PBO:0039814"}


id: GO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siroheme, a tetrahydroporphyrin with adjacent, reduced pyrrole rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme catabolic process","termid":"GO:0042167"},{"relation_name":"is_a","term_name":"siroheme metabolic process","termid":"GO:0046156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0044248","GO:0033013","GO:0008150"],"is_obsolete":false,"name":"siroheme catabolic process","synonyms":[{"name":"sirohaem catabolic process","type":"exact"},{"name":"sirohaem catabolism","type":"exact"},{"name":"siroheme breakdown","type":"exact"},{"name":"siroheme catabolism","type":"exact"},{"name":"siroheme degradation","type":"exact"}],"termid":"GO:0046157"}


id: PBO:0086813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YLR012C is not an essential gene","termid":"PBO:0086813"}


id: PBO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 adjacent tumor promoting lncRNA","termid":"PBO:0050839"}


id: PBO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 1","termid":"PBO:0048174"}


id: PBO:0025506
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofructokinase deficiency","termid":"PBO:0025506"}


id: PBO:0052760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 52","termid":"PBO:0052760"}


id: PBO:0016953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C19orf60 homolog","termid":"PBO:0016953"}


id: GO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear outer membrane (obsolete GO:0031309)","synonyms":[{"name":"integral to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031309"}


id: RO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is transcribed from y if and only if x is synthesized from template y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"RO:0002510"}


id: PBO:0044307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 2","termid":"PBO:0044307"}


id: FYPO:0005242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on glutamine nitrogen source","synonyms":[{"name":"decreased growth on glutamine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on glutamine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with glutamine nitrogen source","type":"narrow"},{"name":"reduced cell growth on glutamine nitrogen source","type":"exact"},{"name":"slow cell growth on glutamine nitrogen source","type":"narrow"}],"termid":"FYPO:0005242"}


id: PBO:0069691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 970, pseudogene","termid":"PBO:0069691"}


id: GO:0160033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"}


id: PR:Q10104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.04c","secondary_identifiers":["UniProtKB:Q10104"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT2","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10104"}


id: GO:0003975
data:
  {"annotated_genes":["SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98999],"is_not":false,"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.","definition_xrefs":["EC:2.7.8.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00924":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016780","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446191","RHEA:13289","Reactome:R-HSA-4549334","MetaCyc:2.7.8.15-RXN"],"synonyms":[{"name":"GlcNAc-1-P transferase activity","type":"related"},{"name":"N-acetylglucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-D-N-acetylglucosamine N-acetylglucosamine 1-phosphate transferase activity","type":"related"},{"name":"UDP-GlcNAc:dolichyl-phosphate GlcNAc-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichol phosphate N-acetyl-D-glucosamine-1-phosphate transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate N-acetyl-D-glucosaminephosphotransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosamine-1-phosphate transferase activity","type":"exact"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine phosphotransferase activity","type":"related"},{"name":"UDP-acetylglucosamine-dolichol phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"chitobiosylpyrophosphoryldolichol synthase activity","type":"related"},{"name":"dolichol phosphate N-acetylglucosamine-1-phosphotransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichyl phosphate acetylglucosamine-1-phosphotransferase activity","type":"related"}],"termid":"GO:0003975","terms_by_termid":{"GO:0003975":null}}


id: GO:0071788
data:
  {"annotated_genes":["SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64687],"is_not":false,"summary":null,"term":"GO:0071788"}]},"cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) tubular network in a stable functional or structural state. The ER tubular network is the ER part that comprises the membranes with high curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network organization","termid":"GO:0071786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network maintenance","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"ER tubular network maintenance","type":"exact"}],"termid":"GO:0071788","terms_by_termid":{"GO:0071788":null}}


id: PBO:0084761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p","termid":"PBO:0084761"}


id: GO:0010011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to auxin, a plant hormone that regulates aspects of plant growth.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"auxin binding","synonyms":[{"name":"auxin receptor","type":"narrow"}],"termid":"GO:0010011"}


id: GO:0043603
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id: PBO:0017505
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id: PR:O94587
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id: GO:1905894
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id: GO:0007034
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  {"annotated_genes":["SJAG_03005","SJAG_02117","SJAG_02049","SJAG_04554","SJAG_04643","SJAG_03137","SJAG_01527","SJAG_04489","SJAG_04023","SJAG_04966","SJAG_01488","SJAG_04931","SJAG_00916","SJAG_00900","SJAG_05303","SJAG_02349","SJAG_07012","SJAG_02240","SJAG_03072","SJAG_05245","SJAG_01809","SJAG_04024","SJAG_04070","SJAG_00380","SJAG_04902","SJAG_03511","SJAG_01645","SJAG_02912","SJAG_04552","SJAG_00108","SJAG_02453","SJAG_03783","SJAG_02234","SJAG_03848","SJAG_01598","SJAG_00821","SJAG_04822","SJAG_03726","SJAG_02315","SJAG_01876","SJAG_00777","SJAG_01913","SJAG_04047","SJAG_04349","SJAG_02587","SJAG_01445","SJAG_01080","SJAG_03403","SJAG_03892","SJAG_02584","SJAG_04912","SJAG_03347","SJAG_03963","SJAG_01981","SJAG_01586","SJAG_02811","SJAG_00204","SJAG_16459","SJAG_01229","SJAG_03442","SJAG_00416","SJAG_04936","SJAG_00299","SJAG_01242","SJAG_03250","SJAG_01281","SJAG_01324","SJAG_00301","SJAG_03756","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71177,71956,76481,77416,84852],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[76979,95015,76757,91713,112656,105558,104013,92442,92712,75424,78359,96933,76718,76553,86280,73422,104128,70164,95406,89800,106760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[92117,95802,102989,95743,76274,85899,101100,97448,104320,96609,75804,106164,112037,73638,74776,105114,113502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[102491,105508,99557,94218,98576,75255,99160,94397,74745,77983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[104696,72213,77312,83908,76758,72314,87295,91547,96378,109904,77256,73109,93509,71068,70979,73423,97581,101941,83742,87159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00204":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04554":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0045324":null}}


id: GO:0098634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding by a cell-adhesion protein on the cell surface to an extracellular matrix component, to mediate adhesion of the cell to the extracellular matrix.","definition_xrefs":["Wikipedia:Cell_adhesion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion mediator activity","termid":"GO:0098631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0098631","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"cell-matrix adhesion mediator activity","synonyms":[{"name":"cell-matrix adhesion molecule","type":"exact"},{"name":"protein binding involved in cell-matrix adhesion","type":"exact"}],"termid":"GO:0098634"}


id: PBO:0040030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 5","termid":"PBO:0040030"}


id: FYPO:0007659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at a normal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon the first division. Daughter cells that are larger than normal upon formation divide earlier, and smaller-formed daughter cells divide later, than cells formed at a normal size.","definition_xrefs":["PomBase:mah","PomBase:jh","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at normal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at normal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by equal cell division","type":"exact"},{"name":"variable cell size at division with normal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at normal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at normal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at normal size","type":"exact"}],"termid":"FYPO:0007659"}


id: GO:0031108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of holo-[acyl-carrier protein].","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"holo-[acyl-carrier-protein] biosynthetic process","synonyms":[{"name":"holo-[acyl-carrier protein] biosynthesis","type":"exact"},{"name":"holo-[acyl-carrier-protein] anabolism","type":"exact"},{"name":"holo-[acyl-carrier-protein] biosynthesis","type":"exact"},{"name":"holo-[acyl-carrier-protein] formation","type":"exact"},{"name":"holo-[acyl-carrier-protein] synthesis","type":"exact"}],"termid":"GO:0031108"}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:24296033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: PBO:0066194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 14","termid":"PBO:0066194"}


id: PBO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 64","termid":"PBO:0071458"}


id: GO:0045974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, mediated by small non-coding RNAs, that modulates the frequency, rate or extent that mRNAs are effectively translated into protein.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation, ncRNA-mediated","termid":"GO:0045974"}


id: PBO:0088968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8 deconjugator Atg4","termid":"PBO:0088968"}


id: GO:0034192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-galactonate, the anion of D-galactonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"D-galactonate metabolic process","synonyms":[{"name":"D-galactonate metabolism","type":"exact"}],"termid":"GO:0034192"}


id: PBO:0046956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 78 member A","termid":"PBO:0046956"}


id: GO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["PMID:9797333","GOC:jp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"is_a","term_name":"cellular response to cold","termid":"GO:0070417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to cold stress","synonyms":[{"name":"trehalose metabolic process involved in response to cold stress","type":"exact"}],"termid":"GO:0070415"}


id: GO:0048584
data:
  {"annotated_genes":["SJAG_03371","SJAG_00209","SJAG_03405","SJAG_04551","SJAG_03936","SJAG_00143","SJAG_03453","SJAG_03903","SJAG_03695","SJAG_00027","SJAG_03048","SJAG_04496","SJAG_00845","SJAG_01181","SJAG_01805","SJAG_00082","SJAG_01632","SJAG_01978","SJAG_00781","SJAG_03160","SJAG_02486","SJAG_05030","SJAG_06592","SJAG_01150","SJAG_00318","SJAG_00823","SJAG_05184","SJAG_03625","SJAG_06622","SJAG_04776","SJAG_02231","SJAG_01587","SJAG_06588","SJAG_02945","SJAG_03828","SJAG_03089","SJAG_04259","SJAG_02605","SJAG_02183","SJAG_02135","SJAG_00561","SJAG_00457","SJAG_04910","SJAG_01837","SJAG_06621","SJAG_02682","SJAG_03907","SJAG_03568"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106250,97608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[112393,107291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[102766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[57143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043410"},{"annotations":[109011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[111823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[104270,90843,104269,113352,107723,104268,104272,104273,104274,107081,104271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[99134,110745,109823,83924,86535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[89432,83327,97843,105811,85722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[108657,108659,108658,112123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[72893,100522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[105828,113435,89930,84089,75198,104585,91680,75888,74840,108093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[93296,102365,86863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"positively_regulates","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00781":null,"SJAG_00823":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03160":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03625":null,"SJAG_03695":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to stimulus","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"activation of response to stimulus","type":"narrow"},{"name":"stimulation of response to stimulus","type":"narrow"},{"name":"up regulation of response to stimulus","type":"exact"},{"name":"up-regulation of response to stimulus","type":"exact"},{"name":"upregulation of response to stimulus","type":"exact"}],"termid":"GO:0048584","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0043410":null,"GO:0045739":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null,"GO:2001034":null}}


id: GO:0098505
data:
  {"annotated_genes":["SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75997],"is_not":false,"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to G-rich, single-stranded, telomere-associated DNA.","definition_xrefs":["PMID:11349150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded telomeric DNA binding","termid":"GO:0043047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"G-rich strand telomeric DNA binding","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0098505","terms_by_termid":{"GO:0098505":null}}


id: PBO:0052200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 4","termid":"PBO:0052200"}


id: GO:0010883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid storage","synonyms":[{"name":"regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010883"}


id: MOD:00186
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes an L-tyrosine residue with 3',3'',5'-triiodo-L-thyronine.","definition_xrefs":["ChEBI:18258","RESID:AA0177","Unimod:397","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triiodinated residue","termid":"MOD:00502"},{"relation_name":"is_a","term_name":"iodinated tyrosine","termid":"MOD:00998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',3'',5'-triiodo-L-thyronine","synonyms":[{"name":"(S)-2-amino-3-[4-(4-hydroxy-3-iodophenoxy)-3,5-diiodophenyl]propanoic acid","type":"exact"},{"name":"3',3'',5'-triiodo-L-thyronine","type":"exact"},{"name":"3,3',5-triiodo-L-thyronine","type":"exact"},{"name":"3,5,3'-Triiodothyronine (from Tyrosine)","type":"exact"},{"name":"3,5,3'-triiodo-L-thyronine","type":"exact"},{"name":"4-(4-hydroxy-3-iodophenoxy)-3,5-diiodo-L-phenylalanine","type":"exact"},{"name":"I3Thy","type":"exact"},{"name":"MOD_RES Triiodothyronine","type":"exact"},{"name":"O-(4-hydroxy-3-iodophenyl)-3,5-diiodo-L-tyrosine","type":"exact"},{"name":"T3","type":"exact"},{"name":"Triiodothyronine","type":"related"},{"name":"liothyronine","type":"exact"},{"name":"triiodo","type":"related"}],"termid":"MOD:00186"}


id: PBO:0109261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL2 interacting cell ontogeny regulator 1","termid":"PBO:0109261"}


id: PBO:0087999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tubulin folding factor D involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl","termid":"PBO:0087999"}


id: PBO:0074249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 3","termid":"PBO:0074249"}


id: PBO:0110414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 4","termid":"PBO:0110414"}


id: GO:0102235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-penten-3-one + NADPH + H+ = 1-pentan-3-one + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-penten-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12295"],"termid":"GO:0102235"}


id: GO:2001256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of store-operated calcium entry","synonyms":[{"name":"regulation of SOCE","type":"exact"},{"name":"regulation of calcium ion import","type":"related"},{"name":"regulation of capacitative calcium entry","type":"exact"},{"name":"regulation of store-operated calcium import","type":"exact"}],"termid":"GO:2001256"}


id: PBO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9 (predicted)","termid":"PBO:0005075"}


id: PBO:0071066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 68","termid":"PBO:0071066"}


id: GO:0070582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA-dependent DNA replication process in which a double-stranded DNA molecule is synthesized from a circular duplex template.","definition_xrefs":["ISBN:0198506732","GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"theta DNA replication","synonyms":[{"name":"theta replication","type":"exact"}],"termid":"GO:0070582"}


id: PBO:0050726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 12","termid":"PBO:0050726"}


id: PBO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.49","termid":"PBO:0003201"}


id: GO:1903093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K48-linked deubiquitination.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K48-linked deubiquitination","termid":"GO:0071108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K48-linked deubiquitination","termid":"GO:1903093"}


id: GO:0015150
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fucose from one side of a membrane to the other. Fucose is 6-deoxygalactose and has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"fucose transmembrane transporter activity","termid":"GO:0015150"}


id: PBO:0031515
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding","termid":"PBO:0031515"}


id: GO:0010959
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108586,86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[97607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metal ion transport. Metal ion transport is the directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of metal ion transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010959","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: FYPO:0002007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes form a single, irregularly-shaped mass in the nucleus.","definition_xrefs":["PMID:19074598","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000654","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000652","FYPO:0000641","FYPO:0000661"],"is_obsolete":false,"name":"abnormal chromosome morphology, single irregular mass","synonyms":[{"name":"abnormal chromatin organization with single irregular mass of chromatin","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, single irregular mass during vegetative growth","type":"exact"}],"termid":"FYPO:0002007"}


id: GO:0036288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ximelagatran stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ximelagatran","termid":"GO:0036288"}


id: PBO:0043729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 8","termid":"PBO:0043729"}


id: GO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesol catabolic process","synonyms":[{"name":"farnesol breakdown","type":"exact"},{"name":"farnesol catabolism","type":"exact"},{"name":"farnesol degradation","type":"exact"}],"termid":"GO:0016488"}


id: PBO:0108613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C, pseudogene","termid":"PBO:0108613"}


id: GO:0060547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of necrotic cell death. Necrotic cell death is a cell death process that is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of necrotic cell death (obsolete GO:0060547)","termid":"GO:0060547"}


id: PBO:0030014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caspofungin","termid":"PBO:0030014"}


id: GO:0034718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the survival motor neuron (SMN) protein and Gemin2; may form the stable core of the larger SMN complex.","definition_xrefs":["PMID:17640873","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"SMN-Gemin2 complex","termid":"GO:0034718"}


id: PBO:0003739
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.205","termid":"PBO:0003739"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["GOC:bhm","PMID:25417112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: PBO:0055333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2761","termid":"PBO:0055333"}


id: PBO:0057604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-1","termid":"PBO:0057604"}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: GO:0140908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 122) = CoA + histone H3 N6-acetyl-L-lysine (position 122).","definition_xrefs":["PMID:23415232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0034212","GO:0140096","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"histone H3K122 acetyltransferase activity","synonyms":[{"name":"histone H3-K122 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K122 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K122 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K122 specific)","type":"exact"}],"termid":"GO:0140908"}


id: PBO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_binding","termid":"PBO:0031562"}


id: FYPO:0001730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of substance in vacuole","synonyms":[{"name":"increased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"increased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"increased vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001730"}


id: PBO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_diphosphoinositol-pentakisphosphate_kinase_activity","termid":"PBO:0034674"}


id: GO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-2 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-2 adrenergic receptor binding","synonyms":[{"name":"beta-2 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031698"}


id: PBO:0080955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 10, pseudogene","termid":"PBO:0080955"}


id: PR:Q09910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.11","synonyms":[{"name":"Spom972h-SPAC30D11.11","type":"exact"}],"termid":"PR:Q09910"}


id: SO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -120 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -60 degrees, psi ~ 0 degrees.","definition_xrefs":["PMID:2371257","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_b","synonyms":[{"name":"beta turn type six b","type":"exact"},{"name":"type VIb beta turn","type":"exact"},{"name":"type VIb turn","type":"exact"}],"termid":"SO:0001154"}


id: PBO:0038415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulates_activity_of","termid":"PBO:0038415"}


id: PBO:0034100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-genetically_interacts_with","termid":"PBO:0034100"}


id: GO:0070278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extracellular matrix constituent secretion","synonyms":[{"name":"ECM constituent secretion","type":"exact"},{"name":"ECM secretion","type":"exact"}],"termid":"GO:0070278"}


id: PBO:0045549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 4","termid":"PBO:0045549"}


id: PBO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 9","termid":"PBO:0070856"}


id: PBO:0055557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2993","termid":"PBO:0055557"}


id: PBO:0076985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 3","termid":"PBO:0076985"}


id: PR:Q9P7E0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- qcr10 gene.","definition_xrefs":["UniProtKB:Q9P7E0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.08","synonyms":[{"name":"Spom972h-qcr10","type":"exact"},{"name":"complex III subunit 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome-c reductase complex subunit qcr10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7E0"}


id: PBO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral dopamine neurotrophic factor","termid":"PBO:0042580"}


id: PBO:0005042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-Q homolog Fta7","termid":"PBO:0005042"}


id: PBO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 126","termid":"PBO:0071124"}


id: PBO:0059732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 6","termid":"PBO:0059732"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:9062192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos:(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos:(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: PBO:0086929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Quinolinate phosphoribosyl transferase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0086929"}


id: GO:0099065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of spine apparatus membrane (obsolete GO:0099065)","termid":"GO:0099065"}


id: PBO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_threonine_level","termid":"PBO:0030583"}


id: PBO:0087671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Isw1a complex; Isw1a has nucleosome-stimulated ATPase activity and represses transcription initiation by specific positioning of a promoter proximal dinucleosome; promotes nucleosome shifts in the 5 prime direction; IOC3 has a paralog, ESC8, that arose from the whole genome duplication","termid":"PBO:0087671"}


id: GO:0018155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of sn-(2S,6R)-lanthionine (meso-lanthione).","definition_xrefs":["RESID:AA0111"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via sn-(2S,6R)-lanthionine (obsolete GO:0018155)","termid":"GO:0018155"}


id: GO:0061180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland epithelium over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelium development","synonyms":[{"name":"breast epithelium development","type":"exact"}],"termid":"GO:0061180"}


id: PBO:0081767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 699","termid":"PBO:0081767"}


id: GO:0097540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of the inner two microtubule doublets of the 9+2 axoneme occurring in most motile cilia.","definition_xrefs":["GOC:krc","PMID:24283352","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"axonemal central pair","synonyms":[{"name":"axonemal microtubule central pair","type":"exact"},{"name":"axoneme central pair","type":"exact"},{"name":"axoneme microtubule central pair","type":"exact"},{"name":"central pair","type":"broad"},{"name":"central-pair microtubules","type":"related"}],"termid":"GO:0097540"}


id: GO:0075279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that leads to the formation of a uredinium, a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uredinium development","synonyms":[{"name":"development of uredium","type":"exact"}],"termid":"GO:0075279"}


id: PBO:0064199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 4","termid":"PBO:0064199"}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: PBO:0082529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall glycoprotein involved in beta-glucan assembly; serves as a K1 killer toxin membrane receptor","termid":"PBO:0082529"}


id: GO:2000837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androstenedione secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"androstenedione secretion","termid":"GO:0035941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of androstenedione secretion","synonyms":[{"name":"regulation of androst-4-ene-3,17-dione secretion","type":"exact"}],"termid":"GO:2000837"}


id: PBO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 5","termid":"PBO:0060297"}


id: PBO:0030657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_glycoprotein_degradation","termid":"PBO:0030657"}


id: GO:1905100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptosome assembly.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:26265044","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"apoptosome assembly","termid":"GO:0097314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of apoptosome assembly","synonyms":[{"name":"regulation of apoptosome formation","type":"exact"}],"termid":"GO:1905100"}


id: PBO:0043981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation 1 like","termid":"PBO:0043981"}


id: GO:0021776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the transmembrane receptor smoothened in a precursor cell in the spinal cord that contributes to the process of a precursor cell becoming capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:15936325","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway involved in ventral spinal cord patterning","termid":"GO:0021910"},{"relation_name":"part_of","term_name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in spinal cord motor neuron cell fate specification","synonyms":[{"name":"hedgehog signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"hh signaling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"},{"name":"smoothened signalling pathway involved in spinal cord motor neuron cell fate specification","type":"exact"}],"termid":"GO:0021776"}


id: PBO:0003880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 ortholog (predicted)","termid":"PBO:0003880"}


id: GO:2000984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP citrate synthase activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transferase activity","termid":"GO:0051348"},{"relation_name":"is_a","term_name":"regulation of ATP citrate synthase activity","termid":"GO:2000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP citrate synthase activity","synonyms":[{"name":"negative regulation of ATP citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citrate (pro-S-)-lyase activity","type":"exact"},{"name":"negative regulation of ATP-citric lyase activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase ((pro-S)-CH(2)COO(-)->acetyl-CoA) (ATP- dephosphorylating) activity","type":"exact"},{"name":"negative regulation of ATP:citrate oxaloacetate-lyase [(pro-S)-CH2COO-rightacetyl-CoA] (ATP-dephosphorylating)","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate C-acetyltransferase [(pro-S)-carboxymethyl-forming, ADP-phosphorylating]","type":"related"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP- phosphorylating) activity","type":"exact"},{"name":"negative regulation of acetyl-CoA:oxaloacetate acetyltransferase (isomerizing; ADP-phosphorylating)","type":"exact"},{"name":"negative regulation of adenosine triphosphate citrate lyase activity","type":"exact"},{"name":"negative regulation of citrate cleavage enzyme activity","type":"related"},{"name":"negative regulation of citrate-ATP lyase activity","type":"exact"},{"name":"negative regulation of citric cleavage enzyme activity","type":"related"}],"termid":"GO:2000984"}


id: GO:0047394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 1-(sn-glycero-3-phospho)-1D-myoinositol = 1D-myo-inositol 1-phosphate + glycerol.","definition_xrefs":["EC:3.1.4.43","MetaCyc:3.1.4.43-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"glycerophosphoinositol inositolphosphodiesterase activity","secondary_identifiers":["RHEA:14033"],"synonyms":[{"name":"1,2-cyclic-inositol-phosphate phosphodiesterase activity","type":"exact"},{"name":"1-(sn-glycero-3-phospho)-1D-myo-inositol inositolphosphohydrolase activity","type":"related"},{"name":"1-D-myo-inositol-1,2-cyclic-phosphate 2-inositolphosphohydrolase activity","type":"related"},{"name":"D-inositol 1,2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol 1,2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol 1:2-cyclic phosphate 2-phosphohydrolase activity","type":"related"},{"name":"inositol-1,2-cyclic-phosphate 2-inositolphosphohydrolase activity","type":"related"}],"termid":"GO:0047394"}


id: GO:0062077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalysing the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.","definition_xrefs":["GOC:bhm","PMID:21247899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phenylacetyl-CoA 1,2-epoxidase complex","synonyms":[{"name":"paaABCE complex","type":"narrow"}],"termid":"GO:0062077"}


id: PR:Q9P6P5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01135","PANTHER:PTHR13048:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit bet3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.18c","secondary_identifiers":["UniProtKB:Q9P6P5"],"synonyms":[{"name":"Spom972h-TRAPPC3","type":"exact"},{"name":"TRAPP subunit bet3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P5"}


id: PBO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Hcn1","termid":"PBO:0001376"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: PBO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein Erv14 (predicted)","termid":"PBO:0002614"}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: GO:0050917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of umami taste","synonyms":[{"name":"umami taste perception","type":"exact"}],"termid":"GO:0050917"}


id: GO:0048209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or destination of vesicle-mediated transport to, from or within the Golgi apparatus.","definition_xrefs":["PMID:10219233","ISBN:0716731363","GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle targeting, to, from or within Golgi","synonyms":[{"name":"regulation of Golgi vesicle targeting","type":"exact"}],"termid":"GO:0048209"}


id: FYPO:0004577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:25398909","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 trimethylation at subtelomere during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 trimethylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased subtelomeric histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0004577"}


id: PBO:0074160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F3 antisense RNA 1","termid":"PBO:0074160"}


id: PBO:0055338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2766","termid":"PBO:0055338"}


id: PBO:0066922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 224","termid":"PBO:0066922"}


id: GO:0046942
data:
  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id: PBO:0051902
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id: GO:0006825
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id: GO:1900093
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id: FYPO:0006902
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id: GO:0140495
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id: PBO:0045269
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id: PBO:0074741
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id: GO:0180002
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id: PR:Q09862
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id: PBO:0047853
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id: GO:1902326
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id: GO:1990691
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id: GO:2000369
data:
  {"annotated_genes":["SJAG_04465","SJAG_00649","SJAG_04052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106291,106926,113908],"is_not":false,"summary":null,"term":"GO:2000369"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of clathrin-mediated endocytosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00649":null,"SJAG_04052":null,"SJAG_04465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of clathrin-dependent endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of clathrin coated pit-dependent endocytosis","type":"exact"},{"name":"regulation of clathrin-mediated endocytosis","type":"exact"}],"termid":"GO:2000369","terms_by_termid":{"GO:2000369":null}}


id: PBO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDIT4L antisense RNA 1","termid":"PBO:0044684"}


id: PBO:0012533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_participant","termid":"PBO:0012533"}


id: PBO:0071421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 27","termid":"PBO:0071421"}


id: SO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The telomeric repeat is a repeat region, part of the chromosome, which in yeast, is a G-rich terminal sequence of the form (TG(1-3))n or more precisely ((TG)(1-6)TG(2-3))n.","definition_xrefs":["PMID:8720065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:telomeric_repeat","type":"exact"},{"name":"telomeric repeat","type":"exact"}],"termid":"SO:0001496"}


id: PBO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-directed RNA polymerase Rdp1","termid":"PBO:0000908"}


id: GO:1902323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:15340492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fatty acid biosynthetic process","termid":"GO:0045717"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"negatively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"down regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"down-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"downregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"downregulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"inhibition of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid formation","type":"narrow"},{"name":"inhibition of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"negative regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"negative regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902323"}


id: PBO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonicaciduria","termid":"PBO:0000195"}


id: PBO:0034378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_gametology_relationship_with","termid":"PBO:0034378"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: GO:1905523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage migration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"positively_regulates","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage migration","synonyms":[{"name":"activation of macrophage migration","type":"narrow"},{"name":"up regulation of macrophage migration","type":"exact"},{"name":"up-regulation of macrophage migration","type":"exact"},{"name":"upregulation of macrophage migration","type":"exact"}],"termid":"GO:1905523"}


id: PBO:0073965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 14","termid":"PBO:0073965"}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: GO:0044097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of proteins or DNA by a cell, via the type IV secretion system.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"secretion by the type IV secretion system","synonyms":[{"name":"secretion via the type IV secretion system","type":"exact"}],"termid":"GO:0044097"}


id: PBO:0068589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 40, pseudogene","termid":"PBO:0068589"}


id: PR:P36615
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase csk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.06c","synonyms":[{"name":"CAK-activating kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CAKAK (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-csk1","type":"exact"}],"termid":"PR:P36615"}


id: PATO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being broken into multiple contiguous wholes.","definition_xrefs":["PATOC:GJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shattered","termid":"PATO:0002081"}


id: GO:0102183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: avenastenone + NADPH + H+ = avenasterol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete avenastenone reductase activity (obsolete GO:0102183)","termid":"GO:0102183"}


id: GO:0106242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = (+)-kolavenyl diphosphate.","definition_xrefs":["PMID:29315936","GOC:eab","RHEA:54676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kolavenyl diphosphate synthase activity","secondary_identifiers":["EC:5.5.1.29"],"termid":"GO:0106242"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: GO:0051903
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106322"},{"annotations":[98907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NAD(P)+ = S-formylglutathione + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-2962","UM-BBD_reactionID:r1146","Reactome:R-HSA-5692237","KEGG_REACTION:R07140","KEGG_REACTION:R06983"],"synonyms":[{"name":"ADH3 activity","type":"narrow"},{"name":"FDH activity","type":"related"},{"name":"GD-FALDH activity","type":"related"},{"name":"GS-FDH activity","type":"related"},{"name":"NAD- and glutathione-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked formaldehyde dehydrogenase activity","type":"related"},{"name":"S-(hydroxymethyl)glutathione:NAD+ oxidoreductase activity","type":"related"},{"name":"chi-ADH activity","type":"narrow"},{"name":"class III alcohol dehydrogenase activity","type":"related"},{"name":"formic dehydrogenase activity","type":"related"},{"name":"glutathione-dependent formaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0051903","terms_by_termid":{"GO:0106321":null,"GO:0106322":null}}


id: PBO:0078512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 6","termid":"PBO:0078512"}


id: GO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pteridine metabolic process","synonyms":[{"name":"regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0042068"}


id: GO:0102775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + isovaleryl-CoA + 3 malonyl-CoA = 6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone + 4 coenzyme A + 3 carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"6-(4-methyl-2-oxopentyl)-4-hydroxy-2-pyrone synthase activity","secondary_identifiers":["MetaCyc:RXN-7826"],"termid":"GO:0102775"}


id: GO:0099173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postsynapse organization","synonyms":[{"name":"postsynapse development","type":"exact"},{"name":"postsynapse morphogenesis","type":"related"},{"name":"postsynapse organisation","type":"exact"},{"name":"postsynapse organization and biogenesis","type":"related"}],"termid":"GO:0099173"}


id: PBO:0081201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN2 divergent transcript","termid":"PBO:0081201"}


id: GO:0006339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription of homeotic genes of the trithorax group.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription of homeotic gene (trithorax group) (obsolete GO:0006339)","synonyms":[{"name":"positive regulation of transcription of homeotic gene (trithorax group)","type":"exact"}],"termid":"GO:0006339"}


id: PBO:0054865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2279","termid":"PBO:0054865"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["GOC:add","PMID:7507411","PMID:8600538","ISBN:0781735149","PMID:14708592","PMID:14680625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: PBO:0087457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p","termid":"PBO:0087457"}


id: PBO:0079396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 3","termid":"PBO:0079396"}


id: MOD:01685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino group with a alpha-palmitoylamino group.","definition_xrefs":["Unimod:47#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino palmitoylated residue","synonyms":[{"name":"N2PamRes","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:01685"}


id: GO:0004014
data:
  {"annotated_genes":["SJAG_03632"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76575],"is_not":false,"summary":null,"term":"GO:0004014"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + H+ = S-adenosylmethioninamine + CO2.","definition_xrefs":["EC:4.1.1.50","RHEA:15981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03632":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"adenosylmethionine decarboxylase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R00178","MetaCyc:SAMDECARB-RXN","Reactome:R-HSA-351222"],"synonyms":[{"name":"S-adenosyl-L-methionine carboxy-lyase [(5-deoxy-5-adenosyl)(3-aminopropyl)-methylsulfonium-salt-forming]","type":"related"},{"name":"S-adenosyl-L-methionine carboxy-lyase activity","type":"related"},{"name":"S-adenosyl-L-methionine decarboxylase activity","type":"related"},{"name":"S-adenosylmethionine decarboxylase activity","type":"related"},{"name":"adenosyl methionine decarboxylase activity","type":"exact"}],"termid":"GO:0004014","terms_by_termid":{"GO:0004014":null}}


id: PBO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 8","termid":"PBO:0042911"}


id: PBO:0046159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 1","termid":"PBO:0046159"}


id: PBO:0074673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58B","termid":"PBO:0074673"}


id: SO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the status of a feature, based on the available evidence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status","termid":"SO:0000905"}


id: PBO:0056565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance domain containing 2","termid":"PBO:0056565"}


id: GO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-aminoadipate + acetyl-CoA = N2-acetyl-alpha-aminoadipate + coenzyme A.","definition_xrefs":["PMID:10613839","PMID:12925802","PMID:29053735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-aminoadipate acetyltransferase activity","secondary_identifiers":["GO:0043869","MetaCyc:RXN-5181"],"synonyms":[{"name":"L-2-aminoadipate N-acetyltransferase activity","type":"related"}],"termid":"GO:0043741"}


id: PBO:0086918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y' telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication","termid":"PBO:0086918"}


id: PBO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial cell transforming 2 like","termid":"PBO:0045779"}


id: PBO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve growth factor receptor","termid":"PBO:0060981"}


id: PBO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5',3'-nucleotidase, cytosolic pseudogene 2","termid":"PBO:0061555"}


id: GO:0052764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of glycosidic bonds through a beta-elimination reaction on alginate, a linear polysaccharide consisting of guluronate (G) and mannuronate (M) as the monomer constituents. An oligoalginate is a linear polymer of two, three or four units of (1->4)-alpha-L-guluronic acid and beta-D-mannuronic acid, releasing monosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enopyranuronosyl groups at their ends.","definition_xrefs":["PMID:20925655","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"exo-oligoalginate lyase activity","secondary_identifiers":["EC:4.2.2.26"],"termid":"GO:0052764"}


id: GO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings.","definition_xrefs":["GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by chemical signal","termid":"GO:0003099"},{"relation_name":"part_of","term_name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by epinephrine-norepinephrine","synonyms":[{"name":"increased force of heart contraction by adrenaline-noradrenaline","type":"exact"},{"name":"increased force of heart contraction by epinephrine-norepinephrine","type":"exact"},{"name":"increased inotropy by epinephrine-norepinephrine","type":"related"},{"name":"increased strength of cardiac contraction by epinephrine-norepinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline-noradrenaline","type":"related"},{"name":"positive regulation of heart contraction by epinephrine-norepinephrine","type":"related"}],"termid":"GO:0001997"}


id: PBO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sporulation_frequency","termid":"PBO:0031627"}


id: MOD:01045
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-dichloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dichlorinated tyrosine","termid":"MOD:01037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-dichloro-L-tyrosine","synonyms":[{"name":"3',5'-Cl2Tyr","type":"exact"}],"termid":"MOD:01045"}


id: PBO:0059002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMACHC pseudogene 1","termid":"PBO:0059002"}


id: GO:0071936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. In cooperation with a primary Wnt receptor, initiating a change in cell activity through the Wnt signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in Wnt signaling pathway (obsolete GO:0071936)","synonyms":[{"name":"Wnt co-receptor activity","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0071936"}


id: PBO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex alpha subunit Egd2","termid":"PBO:0004437"}


id: PBO:0042140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCL3 antisense RNA 1","termid":"PBO:0042140"}


id: FYPO:0003092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at a replication fork pausing site within the mating-type region in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased chromatin binding at mating-type region replication fork barrier","synonyms":[{"name":"reduced chromatin binding at mating-type region replication fork barrier","type":"exact"}],"termid":"FYPO:0003092"}


id: PBO:0012567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 2 (predicted)","termid":"PBO:0012567"}


id: PBO:0047294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 1","termid":"PBO:0047294"}


id: PR:O13815
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 52 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.18c","synonyms":[{"name":"Spom972h-SPAC17H9.18c","type":"exact"}],"termid":"PR:O13815"}


id: GO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sorbitol","synonyms":[{"name":"response to glucitol","type":"exact"}],"termid":"GO:0072708"}


id: GO:0039717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory which is a 50-400nm diameter membrane invagination. Spherules can appear on several enveloped cellular components depending on the virus.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spherule viral factory","secondary_identifiers":["Wikipedia:Viroplasm"],"termid":"GO:0039717"}


id: PBO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.9","termid":"PBO:0005842"}


id: GO:1903521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:23164222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"positively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mammary gland involution","synonyms":[{"name":"activation of mammary gland involution","type":"narrow"},{"name":"up regulation of mammary gland involution","type":"exact"},{"name":"up-regulation of mammary gland involution","type":"exact"},{"name":"upregulation of mammary gland involution","type":"exact"}],"termid":"GO:1903521"}


id: PBO:0058203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4496","termid":"PBO:0058203"}


id: GO:0033773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an isoflavone + O2 + reduced [NADPH-hemoprotein reductase] = a 2'-hydroxyisoflavone + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:18849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isoflavone 2'-hydroxylase activity","secondary_identifiers":["MetaCyc:ISOFLAVONE-2-HYDROXYLASE-RXN","EC:1.14.14.90"],"synonyms":[{"name":"CYP Ge-3","type":"related"},{"name":"CYP81E1","type":"related"},{"name":"isoflavone 2'-monooxygenase activity","type":"broad"}],"termid":"GO:0033773"}


id: PBO:0042616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 2","termid":"PBO:0042616"}


id: GO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11-cis retinal, an isomer of retinal that plays an important role in the visual process in most vertebrates. 11-cis retinal combines with opsin in the rods (scotopsin) to form rhodopsin or visual purple. Retinal is one of the three compounds that makes up vitamin A.","definition_xrefs":["PMID:24403072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal binding","termid":"GO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"11-cis retinal binding","synonyms":[{"name":"11-cis retinaldehyde binding","type":"exact"},{"name":"11-cis-retinal binding","type":"narrow"},{"name":"vitamin A binding","type":"broad"}],"termid":"GO:0005502"}


id: PBO:0069197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 451, pseudogene","termid":"PBO:0069197"}


id: PBO:0000507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase activating kinase Csk1","termid":"PBO:0000507"}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: GO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:21292","EC:2.7.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity","secondary_identifiers":["Reactome:R-HSA-9664940","Reactome:R-HSA-2394007","Reactome:R-HSA-1250370","Reactome:R-HSA-1250462","Reactome:R-HSA-1306957","Reactome:R-HSA-5654692","Reactome:R-HSA-5654714","Reactome:R-HSA-5218819","Reactome:R-HSA-1839107","Reactome:R-HSA-9603445","Reactome:R-HSA-9672162","Reactome:R-HSA-437162","Reactome:R-HSA-186800","Reactome:R-HSA-201510","Reactome:R-HSA-2730870","Reactome:R-HSA-5654701","Reactome:R-HSA-1306979","Reactome:R-HSA-1839091","Reactome:R-HSA-202365","Reactome:R-HSA-2076220","Reactome:R-HSA-9021627","Reactome:R-HSA-2424480","Reactome:R-HSA-9712084","Reactome:R-HSA-5654705","Reactome:R-HSA-5654709","Reactome:R-HSA-392300","Reactome:R-HSA-9665407","Reactome:R-HSA-1676048","Reactome:R-HSA-2029271","Reactome:R-HSA-198266","Reactome:R-HSA-5637801","MetaCyc:2.7.1.153-RXN","Reactome:R-HSA-5655235","Reactome:R-HSA-5655290","Reactome:R-HSA-5655323","Reactome:R-HSA-389158","Reactome:R-HSA-5654690","Reactome:R-HSA-9672177","KEGG_REACTION:R04545","Reactome:R-HSA-5654697","Reactome:R-HSA-8852019","Reactome:R-HSA-9664664","Reactome:R-HSA-2316434","Reactome:R-HSA-5655289","Reactome:R-HSA-5654717","Reactome:R-HSA-1226014","Reactome:R-HSA-177939"],"synonyms":[{"name":"phosphatidylinositol 3-kinase activity, class I","type":"narrow"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"narrow"},{"name":"phosphatidylinositol 3-kinase, class I, catalyst activity","type":"narrow"},{"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase activity","type":"exact"},{"name":"type I phosphoinositide 3-kinase activity","type":"narrow"}],"termid":"GO:0046934"}


id: GO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a submandibular salivary gland. This process begins with a thickening of the epithelium next to the tongue and ends when a bud linked to the oral surface is formed.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submandibular salivary gland formation","termid":"GO:0060661"}


id: GO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nickel ions within a cell.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular nickel ion homeostasis","synonyms":[{"name":"cellular nickel homeostasis","type":"exact"},{"name":"cellular nickel ion homeostasis","type":"exact"}],"termid":"GO:0035785"}


id: FYPO:0007587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to endosome","synonyms":[{"name":"abnormal protein localisation to endosome","type":"exact"},{"name":"abnormal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to endosome during vegetative growth","type":"exact"},{"name":"abnormal protein targeting to endosome","type":"related"}],"termid":"FYPO:0007587"}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["KEGG_REACTION:R08370","EC:4.2.3.38","MetaCyc:RXN-8550"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0060076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 23","termid":"PBO:0060076"}


id: PBO:0081346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 154","termid":"PBO:0081346"}


id: GO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a osteoclast from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["GOC:bf","GOC:yaf","CL:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"is_a","term_name":"bone cell development","termid":"GO:0098751"},{"relation_name":"part_of","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast development","synonyms":[{"name":"osteoclast cell development","type":"exact"}],"termid":"GO:0036035"}


id: PBO:0070943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 51","termid":"PBO:0070943"}


id: GO:1900910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"positively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin metabolic process","synonyms":[{"name":"activation of olefin metabolic process","type":"narrow"},{"name":"activation of olefin metabolism","type":"narrow"},{"name":"positive regulation of olefin metabolism","type":"related"},{"name":"up regulation of olefin metabolic process","type":"exact"},{"name":"up regulation of olefin metabolism","type":"related"},{"name":"up-regulation of olefin metabolic process","type":"exact"},{"name":"up-regulation of olefin metabolism","type":"related"},{"name":"upregulation of olefin metabolic process","type":"exact"},{"name":"upregulation of olefin metabolism","type":"related"}],"termid":"GO:1900910"}


id: GO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic PP cell over time, from its formation to the mature structure. A pancreatic polypeptide-producing cell is a cell in the pancreas that produces pancreatic polypeptide.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell development","termid":"GO:0002068"},{"relation_name":"part_of","term_name":"pancreatic PP cell differentiation","termid":"GO:0003312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic PP cell development","termid":"GO:0003325"}


id: GO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxyindole + O2 = anthranilate + CO2 + H+.","definition_xrefs":["RHEA:19445","EC:1.13.11.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2,3-dihydroxyindole 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:23-DIHYDROXYINDOLE-23-DIOXYGENASE-RXN","KEGG_REACTION:R00983"],"synonyms":[{"name":"2,3-dihydroxyindole:oxygen 2,3-oxidoreductase (decyclizing) activity","type":"related"}],"termid":"GO:0047528"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: PR:O74786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.02c","synonyms":[{"name":"Spom972h-sec9","type":"exact"}],"termid":"PR:O74786"}


id: PBO:0029375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_site_of_double-strand_break","termid":"PBO:0029375"}


id: PR:Q09904
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup124 gene.","definition_xrefs":["UniProtKB:Q09904","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup124 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.04c","synonyms":[{"name":"Spom972h-nup124","type":"exact"},{"name":"nuclear pore protein nup124 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09904"}


id: GO:0009224
data:
  {"annotated_genes":["SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68154],"is_not":false,"summary":null,"term":"GO:0009224"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009174"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CMP biosynthetic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"CMP anabolism","type":"exact"},{"name":"CMP biosynthesis","type":"exact"},{"name":"CMP formation","type":"exact"},{"name":"CMP synthesis","type":"exact"}],"termid":"GO:0009224","terms_by_termid":{"GO:0009224":null}}


id: GO:1904967
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111829],"is_not":false,"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:23770679","PMID:21920317","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"is_a","term_name":"repair of kinetochore microtubule attachment defect","termid":"GO:0140274"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"},{"relation_name":"regulates","term_name":"spindle attachment to meiosis I kinetochore","termid":"GO:0051455"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090699"],"synonyms":[{"name":"correction of merotelic kinetochore attachment, meiosis I","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"regulation of monopolar attachment","type":"exact"},{"name":"regulation of sister kinetochore mono-orientation","type":"exact"},{"name":"repair of merotelic kinetochore attachment defect, meiosis I","type":"related"}],"termid":"GO:1904967","terms_by_termid":{"GO:1904967":null}}


id: PBO:0073185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SELENOO antisense RNA 1","termid":"PBO:0073185"}


id: PBO:0077345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86B","termid":"PBO:0077345"}


id: GO:0035670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an ovary that produces an ovule over time, from its formation to the mature structure. The ovary is the enlarged basal portion of a carpel and matures into a fruit. An ovule is the multicellular structure that gives rise to and contains the female reproductive cells, and develops into a seed.","definition_xrefs":["GOC:bf","GOC:tb","ISBN:0879015322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"part_of","term_name":"carpel development","termid":"GO:0048440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type ovary development","termid":"GO:0035670"}


id: GO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the plasma membrane-associated Fo proteins; rotates within the catalytic core during catalysis. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, central stalk","termid":"GO:0045269"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"plasma membrane proton-transporting ATP synthase, central stalk","synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"broad"},{"name":"proton-transporting ATP synthase, central stalk","type":"broad"}],"termid":"GO:0045270"}


id: PBO:0031290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_metabolism_phenotype","termid":"PBO:0031290"}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: FYPO:0003046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC3L boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC3L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC3L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC3L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC3L","type":"exact"}],"termid":"FYPO:0003046"}


id: GO:1901468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of ferulate catabolic process","termid":"GO:1901466"},{"relation_name":"positively_regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ferulate catabolic process","synonyms":[{"name":"activation of ferulate breakdown","type":"exact"},{"name":"activation of ferulate catabolic process","type":"narrow"},{"name":"activation of ferulate catabolism","type":"exact"},{"name":"activation of ferulate degradation","type":"exact"},{"name":"positive regulation of ferulate breakdown","type":"exact"},{"name":"positive regulation of ferulate catabolism","type":"exact"},{"name":"positive regulation of ferulate degradation","type":"exact"},{"name":"up regulation of ferulate breakdown","type":"exact"},{"name":"up regulation of ferulate catabolic process","type":"exact"},{"name":"up regulation of ferulate catabolism","type":"exact"},{"name":"up regulation of ferulate degradation","type":"exact"},{"name":"up-regulation of ferulate breakdown","type":"exact"},{"name":"up-regulation of ferulate catabolic process","type":"exact"},{"name":"up-regulation of ferulate catabolism","type":"exact"},{"name":"up-regulation of ferulate degradation","type":"exact"},{"name":"upregulation of ferulate breakdown","type":"exact"},{"name":"upregulation of ferulate catabolic process","type":"exact"},{"name":"upregulation of ferulate catabolism","type":"exact"},{"name":"upregulation of ferulate degradation","type":"exact"}],"termid":"GO:1901468"}


id: GO:0160065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22525225","PMID:21131906","PMID:22684255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"SIN/MEN signaling complex","synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065"}


id: GO:0032565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dGMP, deoxyguanosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dGMP binding","termid":"GO:0032565"}


id: GO:2000074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type B pancreatic cell development","synonyms":[{"name":"regulation of pancreatic B cell development","type":"exact"},{"name":"regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000074"}


id: PBO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 6","termid":"PBO:0062108"}


id: GO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).","definition_xrefs":["UM-BBD_enzymeID:e0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"naphthalene disulfonate 1,2-dioxygenase activity","synonyms":[{"name":"naphthalene disulphonate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018689"}


id: GO:0072156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a distal tubule are generated and organized. The distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule morphogenesis","termid":"GO:0072156"}


id: GO:1903910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor clustering.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23575248","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor clustering","termid":"GO:1903909"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor clustering","synonyms":[{"name":"down regulation of receptor clustering","type":"exact"},{"name":"down-regulation of receptor clustering","type":"exact"},{"name":"downregulation of receptor clustering","type":"exact"},{"name":"inhibition of receptor clustering","type":"narrow"}],"termid":"GO:1903910"}


id: PBO:0050454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 2","termid":"PBO:0050454"}


id: PBO:0076164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 2","termid":"PBO:0076164"}


id: PBO:0070070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 27, pseudogene","termid":"PBO:0070070"}


id: GO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 16 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 acetylation (obsolete GO:0043984)","synonyms":[{"name":"histone H4 acetylation at K16","type":"exact"}],"termid":"GO:0043984"}


id: PBO:0049137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 1","termid":"PBO:0049137"}


id: GO:0160062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cutin-based cuticle over time, from its formation to the mature structure. Cutin-based cuticle is an extracellular structure composed of a covalently linked macromolecular scaffold of cutin and a variety of organic solvent-soluble lipids that are collectively termed waxes. Such structures are found on the external face of polysaccharide cell walls in land plants.","definition_xrefs":["PMID:23893170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cutin-based cuticle development","termid":"GO:0160062"}


id: PBO:0003677
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds CRE 5'-TGACGT-3'","termid":"PBO:0003677"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: GO:2000337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial microparticle formation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood microparticle formation","termid":"GO:2000334"},{"relation_name":"is_a","term_name":"regulation of endothelial microparticle formation","termid":"GO:2000335"},{"relation_name":"positively_regulates","term_name":"endothelial microparticle formation","termid":"GO:0072565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial microparticle formation","synonyms":[{"name":"positive regulation of endothelial microparticle generation","type":"exact"},{"name":"positive regulation of endothelial microparticle release","type":"exact"}],"termid":"GO:2000337"}


id: PBO:0031723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_meiotic_recombination","termid":"PBO:0031723"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: GO:0062099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["PMID:27258785","GOC:aruk","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"negatively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"}


id: GO:1903548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of growth hormone activity.","definition_xrefs":["GO_REF:0000059","GOC:mr","GOC:TermGenie","PMID:3068266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"},{"relation_name":"is_a","term_name":"regulation of growth hormone activity","termid":"GO:1903547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of growth hormone activity","synonyms":[{"name":"down regulation of GH activity","type":"exact"},{"name":"down regulation of growth hormone activity","type":"exact"},{"name":"down regulation of pituitary growth hormone activity","type":"narrow"},{"name":"down regulation of placental growth hormone activity","type":"narrow"},{"name":"down-regulation of GH activity","type":"exact"},{"name":"down-regulation of growth hormone activity","type":"exact"},{"name":"down-regulation of pituitary growth hormone activity","type":"narrow"},{"name":"down-regulation of placental growth hormone activity","type":"narrow"},{"name":"downregulation of GH activity","type":"exact"},{"name":"downregulation of growth hormone activity","type":"exact"},{"name":"downregulation of pituitary growth hormone activity","type":"narrow"},{"name":"downregulation of placental growth hormone activity","type":"narrow"},{"name":"inhibition of GH activity","type":"narrow"},{"name":"inhibition of growth hormone activity","type":"narrow"},{"name":"inhibition of pituitary growth hormone activity","type":"narrow"},{"name":"inhibition of placental growth hormone activity","type":"narrow"},{"name":"negative regulation of GH activity","type":"exact"},{"name":"negative regulation of pituitary growth hormone activity","type":"narrow"},{"name":"negative regulation of placental growth hormone activity","type":"narrow"}],"termid":"GO:1903548"}


id: GO:0042691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"positive regulation of hemocyte differentiation","termid":"GO:0045612"},{"relation_name":"positively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of crystal cell differentiation","synonyms":[{"name":"activation of crystal cell differentiation","type":"narrow"},{"name":"stimulation of crystal cell differentiation","type":"narrow"},{"name":"up regulation of crystal cell differentiation","type":"exact"},{"name":"up-regulation of crystal cell differentiation","type":"exact"},{"name":"upregulation of crystal cell differentiation","type":"exact"}],"termid":"GO:0042691"}


id: PBO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A17","termid":"PBO:0047014"}


id: PBO:0069872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1159, pseudogene","termid":"PBO:0069872"}


id: GO:0018144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a covalent cross-link between RNA and a protein.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid-protein covalent cross-linking","termid":"GO:0018143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA-protein covalent cross-linking","termid":"GO:0018144"}


id: PBO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_translation","termid":"PBO:0030849"}


id: GO:0070227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a lymphocyte, a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.","definition_xrefs":["GOC:add","ISBN:0781765196","GOC:mtg_apoptosis","CL:0000542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte apoptotic process","synonyms":[{"name":"lymphocyte apoptosis","type":"narrow"}],"termid":"GO:0070227"}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: FYPO:0003572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:18761674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H3K9me at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0003572"}


id: GO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with intermediate filaments and function in the supramolecular organization of cellular intermediate filament networks.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete intermediate filament associated protein (obsolete GO:0001721)","synonyms":[{"name":"IFAP","type":"exact"},{"name":"intermediate filament associated protein","type":"exact"}],"termid":"GO:0001721"}


id: PBO:0027728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_salt_stress","termid":"PBO:0027728"}


id: PBO:0068661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 42, pseudogene","termid":"PBO:0068661"}


id: PBO:0026771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_import","termid":"PBO:0026771"}


id: PBO:0015249
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDRC and RITS complexes associate together, and with non-coding centromeric RNA in a Dcr1 (hence siRNA) and Clr4 dependent manner","termid":"PBO:0015249"}


id: GO:0021628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the olfactory nerve. This process pertains to the initial formation of a structure from unspecified parts. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"olfactory nerve morphogenesis","termid":"GO:0021627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve formation","synonyms":[{"name":"CN I biosynthesis","type":"related"},{"name":"CN I formation","type":"related"}],"termid":"GO:0021628"}


id: SO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nucleolar RNA of the box C/D family.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_primary_transcript","synonyms":[{"name":"C/D box snoRNA primary transcript","type":"exact"}],"termid":"SO:0000595"}


id: GO:0102355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-3-(5-oxofuran-2-ylidene)propanoate + H2O = 3-maleylpyruvate + H+.","definition_xrefs":["EC:3.1.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"2-oxo-3-(5-oxofuran-2-ylidene)propanoate lactonase activity","secondary_identifiers":["MetaCyc:RXN-13371","RHEA:33967"],"termid":"GO:0102355"}


id: PBO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X homolog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0018201"}


id: GO:0072542
data:
  {"annotated_genes":["SJAG_00369","SJAG_03681","SJAG_04968","SJAG_00095","SJAG_04638","SJAG_00078","SJAG_01270","SJAG_00526"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72714,88553,93249,110174,111066,113039],"is_not":false,"summary":null,"term":"GO:0072542"},{"annotations":[71683,75114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein phosphatase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activator activity","termid":"GO:0019211"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_01270":null,"SJAG_03681":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"protein phosphatase activator activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0071862","GO:0072543"],"synonyms":[{"name":"protein phosphatase 2 activator activity","type":"narrow"},{"name":"protein phosphatase type 1 activator activity","type":"narrow"},{"name":"protein phosphatase type 2A activator activity","type":"narrow"}],"termid":"GO:0072542","terms_by_termid":{"GO:0008160":null,"GO:0072542":null}}


id: GO:0032961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inositol phosphate biosynthetic process","termid":"GO:0010920"},{"relation_name":"is_a","term_name":"regulation of inositol trisphosphate biosynthetic process","termid":"GO:0032960"},{"relation_name":"negatively_regulates","term_name":"inositol trisphosphate biosynthetic process","termid":"GO:0032959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of inositol trisphosphate biosynthetic process","synonyms":[{"name":"negative regulation of IP3 biosynthesis","type":"exact"},{"name":"negative regulation of IP3 biosynthetic process","type":"exact"},{"name":"negative regulation of inositol trisphosphate anabolism","type":"exact"},{"name":"negative regulation of inositol trisphosphate biosynthesis","type":"exact"},{"name":"negative regulation of inositol trisphosphate formation","type":"exact"},{"name":"negative regulation of inositol trisphosphate synthesis","type":"exact"},{"name":"negative regulation of myo-inositol trisphosphate biosynthesis","type":"narrow"},{"name":"negative regulation of myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032961"}


id: GO:0150021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of an apical dendrite are generated and organized.","definition_xrefs":["PMID:22683681","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"apical dendrite development","termid":"GO:0150022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite morphogenesis","termid":"GO:0150021"}


id: GO:1902900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a gut granule.","definition_xrefs":["GO_REF:0000079","GOC:kmv","PMID:17202409","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"gut granule assembly","synonyms":[{"name":"gut granule biogenesis","type":"exact"},{"name":"gut granule formation","type":"exact"}],"termid":"GO:1902900"}


id: GO:0141122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a nitrogen-oxygen bond by means other than hydrolysis and oxidation.","definition_xrefs":["EC:4.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}


id: PBO:0087709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in glucose repression","termid":"PBO:0087709"}


id: GO:0035745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T-helper 2 cell.","definition_xrefs":["GOC:BHF","CL:0000546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell cytokine production","termid":"GO:0035743"},{"relation_name":"part_of","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"T-helper 2 cell cytokine production","synonyms":[{"name":"Th2 cell cytokine production","type":"exact"}],"termid":"GO:0035745"}


id: PBO:0075569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein involved in DNA repair","termid":"PBO:0075569"}


id: GO:0061079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the left horn of the sinus venosus from its initial formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left horn of sinus venosus development","termid":"GO:0061079"}


id: GO:1901410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"regulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901410"}


id: MOD:00882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-(2-aminoethyl)cysteine.","definition_xrefs":["DeltaMass:171","PubMed:12923550","Unimod:472#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(2-aminoethyl)cysteine (Ser)","synonyms":[{"name":"AEC-MAEC","type":"related"},{"name":"Aminoethyl Cysteinyl (AECys)","type":"exact"},{"name":"aminoethylcysteine","type":"related"}],"termid":"MOD:00882"}


id: SO:0002148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 13th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:19385636","PMID:27087541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK13_acetylation_site","synonyms":[{"name":"H2A.ZK13ac","type":"exact"},{"name":"H2AZK13 acetylation site","type":"exact"},{"name":"H2AZK13ac","type":"exact"}],"termid":"SO:0002148"}


id: PBO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 1B","termid":"PBO:0039574"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: PBO:0085969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; YOL036W has a paralog, YIR016W, that arose from the whole genome duplication","termid":"PBO:0085969"}


id: PBO:0025518
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana cak1At","termid":"PBO:0025518"}


id: GO:0003994
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72925,73443],"is_not":false,"summary":null,"term":"GO:0003994"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.","definition_xrefs":["GOC:vw","GOC:pde","EC:4.2.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aconitate hydratase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-70971","Reactome:R-HSA-5690911","RHEA:10336","GO:0052632","Reactome:R-HSA-450975","MetaCyc:RXN-14047"],"synonyms":[{"name":"aconitase activity","type":"exact"},{"name":"cis-aconitase activity","type":"related"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"related"}],"termid":"GO:0003994","terms_by_termid":{"GO:0003994":null}}


id: PBO:0060711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 8","termid":"PBO:0060711"}


id: PBO:0038330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_exacerbated_by","termid":"PBO:0038330"}


id: PBO:0069706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 986, pseudogene","termid":"PBO:0069706"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: PBO:0054081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1431","termid":"PBO:0054081"}


id: GO:0031936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of chromatin silencing (obsolete GO:0031936)","synonyms":[{"name":"down regulation of chromatin silencing","type":"exact"},{"name":"down-regulation of chromatin silencing","type":"exact"},{"name":"downregulation of chromatin silencing","type":"exact"},{"name":"inhibition of chromatin silencing","type":"narrow"},{"name":"loss of chromatin silencing","type":"exact"},{"name":"negative regulation of heterochromatic silencing","type":"exact"}],"termid":"GO:0031936"}


id: PBO:0087679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial inner membrane peptidase (IMP); IMP is required for maturation of mitochondrial proteins of the intermembrane space; Som1p facilitates cleavage of a subset of substrates; contains twin cysteine-x9-cysteine motifs","termid":"PBO:0087679"}


id: GO:0014816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a satellite cell.","definition_xrefs":["PMID:16607119","GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}


id: PBO:0027944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_segregation","termid":"PBO:0027944"}


id: PBO:0109396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 23B","termid":"PBO:0109396"}


id: GO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of a host humoral defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of humoral immune response in host by virus (obsolete GO:0046736)","synonyms":[{"name":"active induction of humoral immune response in host by virus","type":"related"},{"name":"active viral induction of humoral immune response in host","type":"exact"}],"termid":"GO:0046736"}


id: PBO:0029691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_aconitate_hydratase_activity","termid":"PBO:0029691"}


id: GO:0033968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(4-carboxybutanamido)cephalosporanate + H2O = (7R)-7-aminocephalosporanate + glutarate.","definition_xrefs":["EC:3.5.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"glutaryl-7-aminocephalosporanic-acid acylase activity","secondary_identifiers":["MetaCyc:3.5.1.93-RXN","RHEA:23508"],"synonyms":[{"name":"(7R)-7-(4-carboxybutanamido)cephalosporanate amidohydrolase activity","type":"related"},{"name":"7beta-(4-carboxybutanamido)cephalosporanic acid acylase activity","type":"related"},{"name":"CA","type":"related"},{"name":"GA","type":"related"},{"name":"GCA","type":"related"},{"name":"GL-7-ACA acylase activity","type":"related"},{"name":"cephalosporin C acylase activity","type":"related"},{"name":"cephalosporin acylase activity","type":"related"},{"name":"glutaryl-7-ACA acylase activity","type":"related"},{"name":"glutaryl-7-aminocephalosporanic acid acylase activity","type":"related"}],"termid":"GO:0033968"}


id: PBO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 2","termid":"PBO:0080140"}


id: PBO:0036471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth3 (predicted)","termid":"PBO:0036471"}


id: PBO:0079730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 7 (pseudogene)","termid":"PBO:0079730"}


id: MOD:00491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:119#C","PubMed:11861642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thio ether formation - BTP Adduct","synonyms":[{"name":"IBTP","type":"related"},{"name":"Thio Ether Formation - BTP Adduct","type":"related"}],"termid":"MOD:00491"}


id: GO:0160047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + muramyl dipeptide = ADP + H(+) + 6-O-phospho-muramyl dipeptide.","definition_xrefs":["PMID:36002575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"muramyl dipeptide kinase activity","secondary_identifiers":["RHEA:75935"],"termid":"GO:0160047"}


id: MOD:01231
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(13)C labeled N6-propanoyl-L-lysine.","definition_xrefs":["PubMed:12442261","PubMed:11857757","PubMed:11999733","Unimod:59#K","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-propanoyl-L-lysine","termid":"MOD:01398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(13)C labeled N6-propanoyl-L-lysine","synonyms":[{"name":"Propionate labeling reagent heavy form (+3amu), N-term & K","type":"related"},{"name":"Propionyl:13C(3)","type":"related"}],"termid":"MOD:01231"}


id: PBO:0047737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 intronic transcript 1","termid":"PBO:0047737"}


id: GO:1990505
data:
  {"annotated_genes":["SJAG_00573","SJAG_03898","SJAG_02198","SJAG_02439","SJAG_01076","SJAG_03780","SJAG_01221","SJAG_04272","SJAG_01832","SJAG_03843","SJAG_06022","SJAG_01677","SJAG_02079","SJAG_01410","SJAG_02822","SJAG_01374","SJAG_02992"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104451,107013],"is_not":false,"summary":null,"term":"GO:1990505"},{"annotations":[91595,111949,94478,104870,94593,93788,90423,104407,84913,107760,90663,86635,103094,91751,103117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"}]},"cv_name":"biological_process","definition":"Any maintenance of fidelity that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["PMID:19185548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication maintenance of fidelity","termid":"GO:1902298"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication maintenance of fidelity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990510"],"synonyms":[{"name":"maintenance of fidelity involved in mitotic DNA replication","type":"exact"},{"name":"maintenance of fidelity involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1990505","terms_by_termid":{"GO:1990426":null,"GO:1990505":null}}


id: _global:has_regulation_target
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_regulation_target","secondary_identifiers":["GOREL:0000015"],"synonyms":[{"name":"regulates","type":"broad"}],"termid":"_global:has_regulation_target"}


id: PBO:0071565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 31","termid":"PBO:0071565"}


id: GO:1904914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of the localization of a protein-containing macromolecular complex to a telomere.","definition_xrefs":["GOC:TermGenie","PMID:26586433","GOC:BHF","GOC:BHF_telomere","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of establishment of protein-containing complex localization to telomere","termid":"GO:1904913"},{"relation_name":"negatively_regulates","term_name":"establishment of protein-containing complex localization to telomere","termid":"GO:0097695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of protein-containing complex localization to telomere","synonyms":[{"name":"down regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"down-regulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"downregulation of establishment of macromolecular complex localization to telomere","type":"exact"},{"name":"inhibition of establishment of macromolecular complex localisation to telomere","type":"narrow"},{"name":"inhibition of establishment of macromolecular complex localization to telomere","type":"narrow"},{"name":"negative regulation of establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"negative regulation of establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:1904914"}


id: FYPO:0001769
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased tRNA-Asp C38 methylation","synonyms":[{"name":"increased tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"increased tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"increased tRNA-Asp methylation on C38","type":"exact"}],"termid":"FYPO:0001769"}


id: PBO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 5","termid":"PBO:0050037"}


id: PBO:0074055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A34 and TMEM82 antisense RNA 1","termid":"PBO:0074055"}


id: MOD:01343
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00686. Remap to MOD:00686.","definition_xrefs":["PubMed:12148805","Unimod:162"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01343 selenium substitution for sulfur - site C (obsolete MOD:01343)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01343"}


id: GO:1904553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonic acid","termid":"GO:1904552"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to arachidonic acid","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis to arachidonic acid","synonyms":[{"name":"down regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"down-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"downregulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"inhibition of chemotaxis to arachidonic acid","type":"narrow"}],"termid":"GO:1904553"}


id: GO:0010016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the shoot are generated and organized. The shoot is the part of a seed plant body that is usually above ground.","definition_xrefs":["ISBN:0877797099","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system morphogenesis","synonyms":[{"name":"shoot morphogenesis","type":"exact"}],"termid":"GO:0010016"}


id: PBO:0029320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029320"}


id: FYPO:0002852
data:
  {"alleles_by_uniquename":{"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002870"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04280":null,"SJAG_04522":null},"genotype_count":1,"genotypes_by_uniquename":{"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell tip during vegetative growth","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to cell end during vegetative growth","type":"exact"},{"name":"increased protein localization to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002852","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0002870":null}}


id: GO:0017113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+.","definition_xrefs":["EC:1.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:1.3.1.2-RXN","Reactome:R-HSA-73616","Reactome:R-HSA-73585","RHEA:18093"],"synonyms":[{"name":"4,5-dihydrothymine: oxidoreductase activity","type":"related"},{"name":"5,6-dihydrouracil:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"DHPDH","type":"related"},{"name":"DHU dehydrogenase activity","type":"related"},{"name":"DPD","type":"related"},{"name":"dehydrogenase, dihydrouracil (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"dihydropyrimidine dehydrogenase activity","type":"exact"},{"name":"dihydrothymine dehydrogenase activity","type":"related"},{"name":"dihydrouracil dehydrogenase (NADP)","type":"related"},{"name":"dihydrouracil dehydrogenase (NADP+) activity","type":"related"},{"name":"hydropyrimidine dehydrogenase activity","type":"related"}],"termid":"GO:0017113"}


id: GO:0022880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylglucosamine(out) = protein histidine + N-acetylglucosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylglucosamine transmembrane transporter activity","termid":"GO:0015572"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0022857","GO:0016740","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylglucosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylglucosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022880"}


id: PBO:0085863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; has an apparent role in acetylation of N-terminal methionine residues","termid":"PBO:0085863"}


id: GO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"fructose transmembrane transport","synonyms":[{"name":"fructose transport","type":"related"}],"termid":"GO:0015755"}


id: RO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","termid":"RO:0002349"}


id: PBO:0049661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 15","termid":"PBO:0049661"}


id: PBO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class I and II (predicted)","termid":"PBO:0001538"}


id: PBO:0056282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase beta","termid":"PBO:0056282"}


id: GO:0035825
data:
  {"annotated_genes":["SJAG_05373","SJAG_00935","SJAG_01495","SJAG_00266","SJAG_04748","SJAG_04816","SJAG_02460","SJAG_00100","SJAG_03720","SJAG_01419","SJAG_07002","SJAG_03048","SJAG_02294","SJAG_01076","SJAG_03438","SJAG_02465","SJAG_02267","SJAG_04950","SJAG_00757","SJAG_03525","SJAG_03221","SJAG_02556","SJAG_05295","SJAG_03567","SJAG_04303","SJAG_00623","SJAG_01708","SJAG_02708","SJAG_05333","SJAG_02616","SJAG_02339","SJAG_02226","SJAG_01677","SJAG_02822","SJAG_02079","SJAG_02311","SJAG_01156","SJAG_03097","SJAG_04205","SJAG_02724","SJAG_02181","SJAG_02592","SJAG_00172","SJAG_00727","SJAG_02490","SJAG_03219","SJAG_02828","SJAG_01138","SJAG_01044","SJAG_01410","SJAG_00908","SJAG_03751","SJAG_00247","SJAG_02652","SJAG_05239","SJAG_00980","SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103319],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010846"},{"annotations":[94588,103027,111943,84907,84306],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990918"},{"annotations":[111946,84910,83718,94650,103849,105590,106098,110211,102010,96062,101455,91749,92982,113818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007534"},{"annotations":[104076,100271,86049,104961,106389],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010780"},{"annotations":[105592,103029],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[85033,96027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006311"},{"annotations":[103030,112232,97004,105593,96028,92483,88508,84250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000709"},{"annotations":[88509,84251,96029],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010774"},{"annotations":[103322],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045128"},{"annotations":[103693,97835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905263"},{"annotations":[84808],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0010845"},{"annotations":[87130,88304,88388,96064,100245,99755,96126,70957,90348,76672,85324,78138,99302,102100,110698,86495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007131"},{"annotations":[84914,89987,111447],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010520"},{"annotations":[74395,112416,103496,73896,77919,105616,104410,101581,112560,99848],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000712"},{"annotations":[111400],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"A DNA recombination process that results in the exchange of an equal amount of genetic material between highly homologous DNA molecules.","definition_xrefs":["PMID:17304215","GOC:mah","PMID:11139492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00247":null,"SJAG_00266":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_00908":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01138":null,"SJAG_01156":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02181":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02311":null,"SJAG_02339":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02490":null,"SJAG_02556":null,"SJAG_02592":null,"SJAG_02616":null,"SJAG_02652":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03219":null,"SJAG_03221":null,"SJAG_03438":null,"SJAG_03525":null,"SJAG_03567":null,"SJAG_03720":null,"SJAG_03751":null,"SJAG_04205":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_04816":null,"SJAG_04950":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05333":null,"SJAG_05373":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"homologous recombination","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Chromosomal_crossover"],"synonyms":[{"name":"chromosomal crossover","type":"related"},{"name":"interchromosomal DNA recombination","type":"exact"},{"name":"interstrand DNA recombination","type":"exact"},{"name":"reciprocal DNA recombination","type":"narrow"}],"termid":"GO:0035825","terms_by_termid":{"GO:0000709":null,"GO:0000712":null,"GO:0006311":null,"GO:0007131":null,"GO:0007534":null,"GO:0010520":null,"GO:0010772":null,"GO:0010774":null,"GO:0010780":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null,"GO:0062209":null,"GO:1905263":null,"GO:1990918":null}}


id: GO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of embryo sac egg cell differentiation","termid":"GO:0045694"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of embryo sac egg cell differentiation","synonyms":[{"name":"down regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"down-regulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"downregulation of female gametophyte egg cell differentiation","type":"exact"},{"name":"inhibition of female gametophyte egg cell differentiation","type":"narrow"},{"name":"negative regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045695"}


id: PBO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_methionine_nitrogen_source","termid":"PBO:0030096"}


id: GO:0048291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["PMID:2113175","ISBN:0781735149","PMID:12370374","PMID:9186655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"isotype switching to IgG isotypes","synonyms":[{"name":"class switching to IgG isotypes","type":"exact"},{"name":"isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048291"}


id: FYPO:0000278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cell population growth is decreased following spore germination, resulting in the formation of a smaller colony than normal in a given amount of time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell population growth","termid":"FYPO:0000046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth following spore germination","synonyms":[{"name":"decreased growth following spore germination","type":"broad"},{"name":"reduced cell population growth following spore germination","type":"exact"},{"name":"slow cell population growth following spore germination","type":"narrow"},{"name":"spores produced smaller colonies","type":"related"}],"termid":"FYPO:0000278"}


id: PBO:0051283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-22 (pseudogene)","termid":"PBO:0051283"}


id: PBO:0083028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; this putative ORF was included in the original annotation of Chromosome III but was later withdrawn","termid":"PBO:0083028"}


id: PBO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp5 and klp6 enter the nucleus separately","termid":"PBO:0003233"}


id: GO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"}


id: PBO:0044897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPTOR antisense RNA 1","termid":"PBO:0044897"}


id: PBO:0041530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 95","termid":"PBO:0041530"}


id: PR:Q9HE16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe1 gene.","definition_xrefs":["UniProtKB:Q9HE16","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C1399.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.05c","synonyms":[{"name":"Spom972h-toe1","type":"exact"}],"termid":"PR:Q9HE16"}


id: PBO:0005598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutaseaminotransferase (predicted)","termid":"PBO:0005598"}


id: GO:1901915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"positively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule organization","synonyms":[{"name":"activation of capsule organisation","type":"narrow"},{"name":"activation of capsule organization","type":"narrow"},{"name":"activation of capsule organization and biogenesis","type":"related"},{"name":"positive regulation of capsule organisation","type":"exact"},{"name":"positive regulation of capsule organization and biogenesis","type":"related"},{"name":"up regulation of capsule organisation","type":"exact"},{"name":"up regulation of capsule organization","type":"exact"},{"name":"up regulation of capsule organization and biogenesis","type":"related"},{"name":"up-regulation of capsule organisation","type":"exact"},{"name":"up-regulation of capsule organization","type":"exact"},{"name":"up-regulation of capsule organization and biogenesis","type":"related"},{"name":"upregulation of capsule organisation","type":"exact"},{"name":"upregulation of capsule organization","type":"exact"},{"name":"upregulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901915"}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["EC:1.16.1.5","MetaCyc:AQUACOBALAMIN-REDUCTASE-NADPH-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","secondary_identifiers":["RHEA:20752"],"synonyms":[{"name":"NADPH-linked aquacobalamin reductase activity","type":"related"},{"name":"NADPH2:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"NADPH:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"cob(II)alamin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050444"}


id: GO:1900463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:12509465","PMID:17023428","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900463)","synonyms":[{"name":"negative regulation of cellular response to alkalinity by negative regulation of transcription from RNA polymerase II promoter","type":"broad"},{"name":"negative regulation of cellular response to basic pH by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900463"}


id: PBO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8B (putative, gene/pseudogene)","termid":"PBO:0060531"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["GOC:mah","GOC:signaling","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003824","GO:0016740","GO:0038023","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: PBO:0086733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene","termid":"PBO:0086733"}


id: GO:0014897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of an organ due to an increase in size of muscle cells without cell division. In the case of striated muscle, this happens due to the additional synthesis of sarcomeric proteins and assembly of myofibrils.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle hypertrophy","termid":"GO:0014897"}


id: GO:0010122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including alanine, via ornithine.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process to alanine via ornithine","synonyms":[{"name":"arginine breakdown to alanine via ornithine","type":"exact"},{"name":"arginine degradation to alanine via ornithine","type":"exact"}],"termid":"GO:0010122"}


id: PBO:0054086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1438","termid":"PBO:0054086"}


id: PBO:0038736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 8","termid":"PBO:0038736"}


id: PR:O94428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug168 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 168 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.09","synonyms":[{"name":"Spom972h-mug168","type":"exact"}],"termid":"PR:O94428"}


id: PBO:0051175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-64","termid":"PBO:0051175"}


id: GO:0044518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a vasoactive intestinal polypeptide receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor activity in another organism","termid":"GO:0044507"},{"relation_name":"is_a","term_name":"modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044518"}


id: PBO:0002735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30 (predicted)","termid":"PBO:0002735"}


id: PBO:0028105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nuclear_periphery","termid":"PBO:0028105"}


id: PBO:0089922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25","termid":"PBO:0089922"}


id: PBO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element","termid":"PBO:0000991"}


id: GO:0047483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-alpha-D-ribose 1-diphosphate + ATP + H2O + imidazol-4-ylacetate = 1-(5-phosphoribosyl)imidazol-4-ylacetate + ADP + diphosphate + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.8","RHEA:16485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"imidazoleacetate-phosphoribosyldiphosphate ligase activity","secondary_identifiers":["KEGG_REACTION:R04068","MetaCyc:6.3.4.8-RXN"],"synonyms":[{"name":"5-phosphoribosylimidazoleacetate synthetase activity","type":"related"},{"name":"imidazoleacetate:5-phosphoribosyl-diphosphate ligase (ADP- and diphosphate-forming)","type":"related"}],"termid":"GO:0047483"}


id: PR:O59672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family F member 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03109","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C29A3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.09c","secondary_identifiers":["UniProtKB:O59672"],"synonyms":[{"name":"Spom972h-ABCF3","type":"exact"}],"termid":"PR:O59672"}


id: PBO:0058075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4293","termid":"PBO:0058075"}


id: PBO:0060913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1","termid":"PBO:0060913"}


id: PBO:0026669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase_transition","termid":"PBO:0026669"}


id: PBO:0048821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 5","termid":"PBO:0048821"}


id: PBO:0059677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 43","termid":"PBO:0059677"}


id: PR:O13691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10371:SF3","OMA:SCHPO02202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase 24 kDa subunit homolog C11E3.12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.12","secondary_identifiers":["UniProtKB:O13691"],"synonyms":[{"name":"Spom972h-NDUFV2","type":"exact"}],"termid":"PR:O13691"}


id: MOD:00106
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine amide.","definition_xrefs":["PubMed:1390774","RESID:AA0097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine amide","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanamide","type":"exact"},{"name":"L-threonine amide","type":"exact"},{"name":"MOD_RES Threonine amide","type":"exact"},{"name":"ThrN","type":"exact"},{"name":"amidated L-threonine","type":"exact"},{"name":"threoninamide","type":"exact"}],"termid":"MOD:00106"}


id: PBO:0083336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the telomere on the right arm of chromosome 13","termid":"PBO:0083336"}


id: GO:0141084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signal transduction pathway that starts with a ligand binding to a pattern recognition receptor (PRR), assembly of the inflammasome complex, leading to the activation of CASP1 and inducing an inflammatory response. In some cases, inflammasome-mediated signal transduction can lead to programmed cell death, such as pyroptosis.","definition_xrefs":["PMID:35883561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"},{"relation_name":"part_of","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"inflammasome-mediated signaling pathway","synonyms":[{"name":"inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141084"}


id: PBO:0061188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 3-1","termid":"PBO:0061188"}


id: GO:0046686
data:
  {"annotated_genes":["SJAG_00988","SJAG_04516","SJAG_01078","SJAG_01803","SJAG_02599","SJAG_01344","SJAG_00044","SJAG_01351","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89388,103765,113276,70918,89387,92575,88924,92614],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[84629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01078":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_01803":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cadmium ion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cadmium sensitivity/resistance","type":"related"},{"name":"response to cadmium","type":"exact"}],"termid":"GO:0046686","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: GO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VI secretion system (obsolete GO:0044049)","termid":"GO:0044049"}


id: GO:0097371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the MDM2/MDM4 protein family, comprising negative regulators of p53.","definition_xrefs":["InterPro:IPR016495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MDM2/MDM4 family protein binding","termid":"GO:0097371"}


id: GO:0006995
data:
  {"annotated_genes":["SJAG_00781","SJAG_04725","SJAG_03309","SJAG_03256","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99267],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[99270,98247],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[96870,83642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to nitrogen levels","termid":"GO:0043562"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00781":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006995","terms_by_termid":{"GO:0031142":null,"GO:1901481":null,"GO:1901482":null,"GO:1905287":null}}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["ISBN:0140513590","GOC:das","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Anaerobic_respiration","Wikipedia:Cellular_respiration#Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION"],"termid":"GO:0009061"}


id: PBO:0087123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-type ubiquitin ligase of the endosomal and vacuolar membranes; binds phosphatidylinositol 3-phosphate; contains a FYVE finger domain","termid":"PBO:0087123"}


id: PBO:0073033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin","termid":"PBO:0073033"}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


id: PBO:0034201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-main_stem_of","termid":"PBO:0034201"}


id: PBO:0081471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 345","termid":"PBO:0081471"}


id: GO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration of chromosome structure from the condensed form to a relaxed disperse form.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome decondensation (obsolete GO:0051312)","termid":"GO:0051312"}


id: FYPO:0007437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic spindle assembly checkpoint is activated continuously. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["PomBase:mah","PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"constitutive activation of mitotic spindle assembly checkpoint","synonyms":[{"name":"constitutive activation of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"constitutively activated of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0007437"}


id: PBO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NETO1 divergent transcript","termid":"PBO:0060890"}


id: PBO:0066873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 173","termid":"PBO:0066873"}


id: PBO:0068178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 485","termid":"PBO:0068178"}


id: GO:0034424
data:
  {"annotated_genes":["SJAG_07012","SJAG_03511"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74743,94395],"is_not":false,"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"A membrane-associated protein complex that is required for a late stage of endosomal transport. In budding yeast, this complex consists of Vps55p and Vps68p proteins.","definition_xrefs":["PMID:18216282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03511":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005768","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Vps55/Vps68 complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0034424","terms_by_termid":{"GO:0034424":null}}


id: PBO:0027783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation","termid":"PBO:0027783"}


id: PBO:0057434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 551b","termid":"PBO:0057434"}


id: PBO:0087242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease of SPS plasma membrane amino acid sensor system; contains an inhibitory domain that dissociates in response to extracellular amino acids, freeing a catalytic domain to activate transcription factor Stp1p; other members are Ssy1p and Ptr3p","termid":"PBO:0087242"}


id: GO:0019877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of diaminopimelate, both as an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.","definition_xrefs":["GOC:ma","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"diaminopimelate metabolic process","termid":"GO:0046451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diaminopimelate biosynthetic process","synonyms":[{"name":"diaminopimelate anabolism","type":"exact"},{"name":"diaminopimelate biosynthesis","type":"exact"},{"name":"diaminopimelate formation","type":"exact"},{"name":"diaminopimelate synthesis","type":"exact"}],"termid":"GO:0019877"}


id: PBO:0056215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B17","termid":"PBO:0056215"}


id: PBO:0066295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member W, pseudogene","termid":"PBO:0066295"}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: GO:1990121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimer of H-NS proteins that is involved in bacterial nucleoid condensation and negative regulation of global gene expression by directly binding to promoter regions. Recognizes both structural and sequence-specific motifs in double-stranded DNA and has binding preference for bent DNA.","definition_xrefs":["GOC:bhm","PMID:12592399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA bending complex","termid":"GO:1990104"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"bacterial nucleoid","termid":"GO:0043590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"H-NS complex","synonyms":[{"name":"DNA-binding protein H-NS complex","type":"exact"},{"name":"histone-like protein H-NS complex","type":"exact"}],"termid":"GO:1990121"}


id: PBO:0069829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1115, pseudogene","termid":"PBO:0069829"}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: GO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome.","definition_xrefs":["GOC:clt","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"pericentriolar material","termid":"GO:0000242"}


id: PBO:0065014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 1","termid":"PBO:0065014"}


id: PBO:0048880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member F, pseudogene","termid":"PBO:0048880"}


id: PBO:0082709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic60p is also involved in import of intermembrane space (IMS) proteins, probably by positioning Mia40p relative to the TOM complex to receive incoming proteins; ortholog of mammalian mitofilin","termid":"PBO:0082709"}


id: PBO:0052825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 125, pseudogene","termid":"PBO:0052825"}


id: PR:O74191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fkbp39 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FK506-binding protein 39 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.02","synonyms":[{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fkbp39","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74191"}


id: PBO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umil/min/mg","termid":"PBO:0001494"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: GO:1902342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of xylitol out of a cell or organelle.","definition_xrefs":["GOC:TermGenie","PMID:23475614"],"gene_count":0,"genotype_count":0,"name":"obsolete xylitol export (obsolete GO:1902342)","termid":"GO:1902342"}


id: PBO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indolethylamine N-methyltransferase","termid":"PBO:0051688"}


id: PBO:0067137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 185, pseudogene","termid":"PBO:0067137"}


id: GO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to a specific residue on a target protein.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"protein-glutamic acid ligase activity","synonyms":[{"name":"protein glutamylase activity","type":"exact"},{"name":"protein-glutamate ligase activity","type":"exact"}],"termid":"GO:0070739"}


id: GO:0038053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with estrogen and transmitting the signal to the transcriptional machinery by binding to an RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. For example, estrogen-bound receptors can bind to transcription factor complexes to regulate transcription of genes whose promoters do not contain estrogen response elements.","definition_xrefs":["GOC:signaling","PMID:17615392"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, estrogen-activated RNA polymerase II transcription factor binding (obsolete GO:0038053)","synonyms":[{"name":"estrogen nuclear receptor activity","type":"broad"},{"name":"estrogen-activated RNA polymerase II transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0038053"}


id: FYPO:0002486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic strand displacement is decreased. Meiotic strand displacement is the part of meiotic recombination in which the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA is rejected.","definition_xrefs":["PMID:22723423","PomBase:mah","GO:0000714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic strand displacement","synonyms":[{"name":"decreased D-loop unwinding","type":"related"},{"name":"decreased meiotic D-loop dissociation","type":"exact"},{"name":"decreased meiotic D-loop processing","type":"related"},{"name":"reduced meiotic strand displacement","type":"exact"}],"termid":"FYPO:0002486"}


id: PBO:0028748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_containing_anucleate_spores","termid":"PBO:0028748"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:vw","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000004","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: PBO:0028619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U1_snRNP_binding","termid":"PBO:0028619"}


id: GO:0050003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP = 2'-deoxy-5-methyl-5'-cytidylate + 7,8-dihydrofolate.","definition_xrefs":["EC:2.1.1.54","RHEA:11568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"deoxycytidylate C-methyltransferase activity","secondary_identifiers":["MetaCyc:DEOXYCYTIDYLATE-C-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01670"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:dCMP C-methyltransferase activity","type":"related"},{"name":"dCMP methyltransferase activity","type":"related"},{"name":"deoxycytidylate methyltransferase activity","type":"related"}],"termid":"GO:0050003"}


id: PBO:0027829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ascospore_release_from_ascus","termid":"PBO:0027829"}


id: PBO:0041407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 136","termid":"PBO:0041407"}


id: PBO:0027276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasm_during_cellular_response_to_salt_stress","termid":"PBO:0027276"}


id: PBO:0074625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 22B","termid":"PBO:0074625"}


id: GO:1905559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0061024","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"activation of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"activation of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"activation of mitotic nuclear envelope degradation","type":"narrow"},{"name":"activation of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"positive regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"positive regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"up-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"upregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"upregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"upregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"upregulation of mitotic nuclear envelope disassembly","type":"exact"}],"termid":"GO:1905559"}


id: GO:0034437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a glycoprotein from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete glycoprotein transmembrane transporter activity (obsolete GO:0034437)","synonyms":[{"name":"glycoprotein transporter activity","type":"related"}],"termid":"GO:0034437"}


id: FYPO:0006479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cohesin loading is abnormal. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["PomBase:mah","GO:0071921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cohesin loading","synonyms":[{"name":"abnormal cohesin association with chromatin","type":"exact"},{"name":"abnormal cohesin localisation to chromatin","type":"exact"},{"name":"abnormal cohesin localization to chromatin","type":"exact"}],"termid":"FYPO:0006479"}


id: GO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.","definition_xrefs":["RHEA:11260","EC:1.6.3.1","PMID:10601291","PMID:11822874","PMID:10401672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD(P)H oxidase H2O2-forming activity","secondary_identifiers":["Reactome:R-HSA-9698758","Reactome:R-HSA-5693681"],"synonyms":[{"name":"NAD(P)H oxidase activity","type":"broad"},{"name":"NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"NADPH oxidase","type":"broad"},{"name":"THOX2 activity","type":"narrow"},{"name":"ThOX activity","type":"narrow"},{"name":"dual oxidase activity","type":"related"},{"name":"p138tox","type":"related"},{"name":"thyroid NADPH oxidase activity","type":"narrow"},{"name":"thyroid oxidase 2 activity","type":"narrow"},{"name":"thyroid oxidase activity","type":"narrow"}],"termid":"GO:0016174"}


id: GO:0033118
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an esterosome. This membrane has characteristics of rough endoplasmic reticulum (RER) membranes.","definition_xrefs":["PMID:2307702","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"esterosome","termid":"GO:0033117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"esterosome membrane","termid":"GO:0033118"}


id: GO:0032026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnesium ion","termid":"GO:0032026"}


id: PBO:0034108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_subsequence","termid":"PBO:0034108"}


id: GO:1904819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:15840053","GOC:TermGenie","GO_REF:0000094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parietal peritoneum development","synonyms":[{"name":"peritoneal cavity lining development","type":"exact"}],"termid":"GO:1904819"}


id: FYPO:0006505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip","synonyms":[{"name":"abolished protein localisation to shmoo tip","type":"exact"},{"name":"abolished protein localization to mating projection tip","type":"exact"},{"name":"protein localization to shmoo tip abolished","type":"exact"}],"termid":"FYPO:0006505"}


id: PBO:0083542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YRF1-4/YLR466W","termid":"PBO:0083542"}


id: GO:0102648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 6-phosphate + D-ribose 5-phosphate = D-glycero-D-altro-octulose 8-phosphate + D-glyceraldehyde 3-phosphate.","definition_xrefs":["EC:2.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016744","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"D-ribose 5-phosphate:D-fructose 6-phosphate transaldolase activity","secondary_identifiers":["MetaCyc:RXN-15790"],"termid":"GO:0102648"}


id: GO:1900941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900941"}


id: PBO:0018206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq11","termid":"PBO:0018206"}


id: GO:1904543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of free ubiquitin chain polymerization.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:24660806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein polymerization","termid":"GO:0032272"},{"relation_name":"is_a","term_name":"regulation of free ubiquitin chain polymerization","termid":"GO:1904542"},{"relation_name":"negatively_regulates","term_name":"free ubiquitin chain polymerization","termid":"GO:0010994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of free ubiquitin chain polymerization","synonyms":[{"name":"down regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"down-regulation of free ubiquitin chain polymerization","type":"exact"},{"name":"downregulation of free ubiquitin chain polymerization","type":"exact"},{"name":"inhibition of free ubiquitin chain polymerization","type":"narrow"}],"termid":"GO:1904543"}


id: PBO:0033758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-asymmetric_gamma-tubulin_complex_localization_to_single_mitotic_spindle_pole_body","termid":"PBO:0033758"}


id: SO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chromoplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_chromosome","synonyms":[{"name":"chromoplast chromosome","type":"exact"}],"termid":"SO:0000821"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: PR:O42955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.07c","synonyms":[{"name":"Spom972h-ppr3","type":"exact"},{"name":"mitochondrial group I intron splicing factor dmr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42955"}


id: FYPO:0005411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore results in a larger number of kinetochores remaining unattached than normal.","definition_xrefs":["PMID:18256284","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000138","FYPO:0000337"],"is_obsolete":false,"name":"increased number of unattached kinetochores","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore resulting in increased number of unattached kinetochores","type":"exact"},{"name":"decreased attachment of mitotic spindle microtubules to kinetochore","type":"related"},{"name":"increased number of unattached kinetochores during mitotic cell cycle","type":"related"},{"name":"increased number of unattached kinetochores during vegetative growth","type":"exact"},{"name":"kinetochore loss","type":"related"}],"termid":"FYPO:0005411"}


id: GO:0010420
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110066],"is_not":false,"summary":null,"term":"GO:0010420"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-methionine = 3-methoxy-4-hydroxy-5-polyprenylbenzoic acid + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10419476","PMID:9628017","RHEA:44452","PMID:23190198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"3,4-dihydroxy-5-polyprenylbenzoic acid O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.114","GO:1990886","MetaCyc:RXN-9281","Reactome:R-HSA-2162193"],"synonyms":[{"name":"polyprenyldihydroxybenzoate methyltransferase activity","type":"related"}],"termid":"GO:0010420","terms_by_termid":{"GO:0010420":null}}


id: PBO:0081652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 577","termid":"PBO:0081652"}


id: PBO:0051375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-268 (non-functional)","termid":"PBO:0051375"}


id: PR:P0CS84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.15 gene.","definition_xrefs":["UniProtKB:P0CS84","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1348.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.15","synonyms":[{"name":"Spom972h-SPBC1348.15","type":"exact"}],"termid":"PR:P0CS84"}


