# terms

id: PBO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: GO:0072665
data:
  {"annotated_genes":["SJAG_04552","SJAG_01088","SJAG_16459","SJAG_01586","SJAG_00380","SJAG_02912","SJAG_01382","SJAG_02117","SJAG_05303","SJAG_05210","SJAG_00108","SJAG_00181","SJAG_01242","SJAG_03892","SJAG_03756","SJAG_00208","SJAG_03976","SJAG_01229","SJAG_01783","SJAG_04489","SJAG_01360","SJAG_04936","SJAG_04912","SJAG_04554","SJAG_03250","SJAG_02584","SJAG_03783","SJAG_04963","SJAG_03385","SJAG_00821","SJAG_01488","SJAG_01981","SJAG_00416","SJAG_03970","SJAG_04024","SJAG_01281","SJAG_00204","SJAG_04349"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95194,87760,94138,95772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032258"},{"annotations":[83793,108529,83869,86746,87156,87290,109655,101144,83905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[74778,76160,76279,78793,76978,76716,71452,73640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[93509,70979,101941,73423,77312,83742,97581,104696,91547,87295,71068,72314,73109,77256,96378,83908,87159,76758,72213,109904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a vacuole.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00821":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01360":null,"SJAG_01382":null,"SJAG_01488":null,"SJAG_01586":null,"SJAG_01783":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03385":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04554":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_04963":null,"SJAG_05210":null,"SJAG_05303":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to vacuole","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"protein localisation to vacuole","type":"exact"}],"termid":"GO:0072665","terms_by_termid":{"GO:0006623":null,"GO:0032258":null,"GO:0043328":null,"GO:0120113":null}}


id: PBO:0078593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 6, Y-linked","termid":"PBO:0078593"}


id: PBO:0067231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 302, pseudogene","termid":"PBO:0067231"}


id: PBO:0072625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 14 homolog","termid":"PBO:0072625"}


id: GO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which DNA and associated proteins are formed into a compact, orderly structure within a nucleoid.","definition_xrefs":["GOC:bf","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoid DNA packaging (obsolete GO:0036385)","termid":"GO:0036385"}


id: GO:0034193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-galactonate, the anion of L-galactonic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactonate metabolic process","termid":"GO:0019583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-galactonate metabolic process","synonyms":[{"name":"L-galactonate metabolism","type":"exact"}],"termid":"GO:0034193"}


id: PBO:0073395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain bifurcated histone lysine methyltransferase 1","termid":"PBO:0073395"}


id: PBO:0081090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 20","termid":"PBO:0081090"}


id: PR:O36024
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.12","synonyms":[{"name":"Spom972h-fta1","type":"exact"},{"name":"sim4 complex subunit fta1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36024"}


id: GO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a membrane, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"},{"relation_name":"part_of","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in membrane","termid":"GO:0072658"}


id: PBO:0064416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8C","termid":"PBO:0064416"}


id: PBO:0042153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 15","termid":"PBO:0042153"}


id: PBO:0058853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8082","termid":"PBO:0058853"}


id: PBO:0056811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4B pseudogene 1","termid":"PBO:0056811"}


id: PBO:0110459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane O-mannosyltransferase Ogm4","termid":"PBO:0110459"}


id: GO:0014852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction","termid":"GO:0014819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}


id: PBO:0072216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19","termid":"PBO:0072216"}


id: PBO:0082387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 7 subunit of the 20S proteasome","termid":"PBO:0082387"}


id: GO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential release of a C-terminal arginine or lysine residue. Function is inhibited by diisopropyl fluorophosphate and sensitive to thiol-blocking reagents.","definition_xrefs":["EC:3.4.16.6"],"gene_count":0,"genotype_count":0,"name":"obsolete carboxypeptidase D activity (obsolete GO:0004187)","synonyms":[{"name":"CPDW-II","type":"related"},{"name":"KEX1 carboxypeptidase activity","type":"related"},{"name":"KEX1 proteinase activity","type":"related"},{"name":"KEX1DELTAp","type":"related"},{"name":"carboxypeptidase D activity","type":"exact"},{"name":"carboxypeptidase KEX1 activity","type":"narrow"},{"name":"carboxypeptidase Kex1","type":"related"},{"name":"carboxypeptidase S1 activity","type":"related"},{"name":"cereal serine carboxypeptidase II","type":"related"},{"name":"gene KEX1 serine carboxypeptidase","type":"narrow"},{"name":"saccharomyces cerevisiae KEX1 gene product","type":"related"}],"termid":"GO:0004187"}


id: PBO:0061159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase 2","termid":"PBO:0061159"}


id: FYECO:0000027
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiment was performed in the presence of mating pheromone.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000027 presence of mating pheromone (obsolete FYECO:0000027)","termid":"FYECO:0000027"}


id: GO:2000518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000515"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell activation","termid":"GO:2000517"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell activation","synonyms":[{"name":"negative regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000518"}


id: FYPO:0002894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to calcium ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during cellular response to calcium ion","synonyms":[{"name":"decreased transcription during cellular response to calcium","type":"exact"},{"name":"decreased transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"decreased transcription in response to calcium","type":"exact"},{"name":"reduced transcription during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0002894"}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: GO:0035922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the foramen ovale closes after birth, to prevent blood flow between the right and left atria. In the fetal heart, the foramen ovale allows blood to enter the left atrium from the right atrium. Closure of the foramen ovale after birth stops this blood flow.","definition_xrefs":["GOC:BHF","PMID:19762328","UBERON:0004754","GOC:vk","Wikipedia:Foramen_ovale_(heart)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foramen ovale closure","synonyms":[{"name":"foramen ovale of heart closure","type":"exact"}],"termid":"GO:0035922"}


id: PBO:0004044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad60","termid":"PBO:0004044"}


id: GO:0150158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"positively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-34 production","secondary_identifiers":["GO:0150161"],"synonyms":[{"name":"positive regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150158"}


id: PR:Q10307
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.02c","secondary_identifiers":["UniProtKB:Q10307"],"synonyms":[{"name":"Spom972h-CHCHD10","type":"exact"}],"termid":"PR:Q10307"}


id: PBO:0039325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 12-lipoxygenase pseudogene 2","termid":"PBO:0039325"}


id: FYPO:0003817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5'-3' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000641"],"is_obsolete":false,"name":"abnormal 5'-3' DNA helicase activity","termid":"FYPO:0003817"}


id: PBO:0088082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; involved in degradation of polyubiquitinated proteins via the ERAD (ER-associated degradation) pathway; modulates the role of the Cdc48p-Nplp-Ufd1p AAA ATPase complex in delivery of misfolded proteins to the proteasome; protein abundance increases in response to DNA replication stress; human ortholog ASPSCR1 partially complements the yeast null mutant","termid":"PBO:0088082"}


id: PBO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin","termid":"PBO:0046259"}


id: PBO:0065744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYD and CARD domain containing","termid":"PBO:0065744"}


id: FYECO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with no adenine.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, no adenine","termid":"FYECO:0000286"}


id: PBO:0028828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_chromatin","termid":"PBO:0028828"}


id: GO:0008418
data:
  {"annotated_genes":["SJAG_00450","SJAG_00476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67757,77686],"is_not":false,"summary":null,"term":"GO:0008418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-terminal L-asparaginyl-[protein] + H+ + H2O = N-terminal L-aspartyl-[protein] + NH4+. This reaction is the deamidation of an N-terminal asparagine residue in a peptide or protein.","definition_xrefs":["PMID:8910481","RHEA:50676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00450":null,"SJAG_00476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0016810"],"is_obsolete":false,"name":"protein-N-terminal asparagine amidohydrolase activity","references_by_uniquename":{"GO_REF:0000104":null,"PMID:21873635":null},"secondary_identifiers":["EC:3.5.1.121"],"termid":"GO:0008418","terms_by_termid":{"GO:0008418":null}}


id: PBO:0041797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 6","termid":"PBO:0041797"}


id: PBO:0052256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 3","termid":"PBO:0052256"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: GO:0003843
data:
  {"annotated_genes":["SJAG_00876","SJAG_03587","SJAG_02222","SJAG_05285","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74127,75152,78507,108394],"is_not":false,"summary":null,"term":"GO:0003843"},{"annotations":[110981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).","definition_xrefs":["EC:2.4.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00876":null,"SJAG_01288":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,3-beta-D-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0009981","MetaCyc:13-BETA-GLUCAN-SYNTHASE-RXN","RHEA:21476"],"synonyms":[{"name":"(1,3)-beta-glucan (callose) synthase activity","type":"related"},{"name":"1,3-beta-D-glucan synthetase activity","type":"related"},{"name":"1,3-beta-D-glucan-UDP glucosyltransferase activity","type":"related"},{"name":"1,3-beta-glucan synthase activity","type":"related"},{"name":"1,3-beta-glucan-uridine diphosphoglucosyltransferase activity","type":"related"},{"name":"GS-II","type":"related"},{"name":"UDP-glucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-1,3-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose-beta-glucan glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:(1,3)beta-glucan synthase activity","type":"related"},{"name":"UDP-glucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-1,3-beta-D-glucan glucosyltransferase activity","type":"related"},{"name":"UDPglucose:1,3-beta-D-glucan 3-beta-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,3-glucan synthase activity","type":"exact"},{"name":"beta-1,3-glucan synthetase activity","type":"related"},{"name":"callose synthase activity","type":"exact"},{"name":"callose synthetase activity","type":"related"},{"name":"paramylon synthetase","type":"related"},{"name":"uridine diphosphoglucose-1,3-beta-glucan glucosyltransferase activity","type":"related"}],"termid":"GO:0003843","terms_by_termid":{"GO:0003843":null,"GO:0140752":null}}


id: PBO:0040496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUP1 lipid droplet regulating VLDL assembly factor","termid":"PBO:0040496"}


id: PBO:0042644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 19 pseudogene","termid":"PBO:0042644"}


id: PBO:0061352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 10","termid":"PBO:0061352"}


id: PBO:0027589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_tyrosine_phosphorylation_during_cellular_response_to_salt_stress","termid":"PBO:0027589"}


id: FYPO:0002421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has an abnormal shape and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division","termid":"FYPO:0001042"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, abnormal cell shape","synonyms":[{"name":"inviable following spore germination, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable germinated spore, single cell or double division, abnormal cell shape","type":"exact"},{"name":"lethal after spore germination, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002421"}


id: GO:1905715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cornification.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cornification","termid":"GO:1905715"}


id: PR:O59793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bis1 gene.","definition_xrefs":["UniProtKB:O59793","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein bis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.02c","synonyms":[{"name":"Spom972h-bis1","type":"exact"}],"termid":"PR:O59793"}


id: MOD:01048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to 2-pyrrolidone-5-carboxylic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone-5-carboxylic acid","synonyms":[{"name":"PyrGlu","type":"exact"}],"termid":"MOD:01048"}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: PBO:0060943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor, erythroid 4","termid":"PBO:0060943"}


id: PBO:0086168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation","termid":"PBO:0086168"}


id: GO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-tyrosine to form peptidyl-dihydroxyphenylalanine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine hydroxylation","termid":"GO:0018336"}


id: PBO:0056110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLA2 pseudogene 1","termid":"PBO:0056110"}


id: GO:0006167
data:
  {"annotated_genes":["SJAG_01070","SJAG_01859","SJAG_00044","SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77613,76096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[111984,73578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"AMP anabolism","type":"exact"},{"name":"AMP biosynthesis","type":"exact"},{"name":"AMP formation","type":"exact"},{"name":"AMP synthesis","type":"exact"}],"termid":"GO:0006167","terms_by_termid":{"GO:0044208":null,"GO:0044209":null}}


id: GO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ascospore wall chitin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of cell wall chitin biosynthetic process","termid":"GO:0032884"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall biogenesis","termid":"GO:0032995"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall chitin biosynthetic process","termid":"GO:0034217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"regulation of ascospore wall chitin biosynthetic process","synonyms":[{"name":"regulation of ascospore wall chitin anabolism","type":"exact"},{"name":"regulation of ascospore wall chitin biosynthesis","type":"exact"},{"name":"regulation of ascospore wall chitin formation","type":"exact"},{"name":"regulation of ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034223"}


id: PBO:0072687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 3B","termid":"PBO:0072687"}


id: PBO:0084799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of the mitochondrial carrier family; high affinity pyridoxal 5'-phosphate (PLP) transporter, important for delivery of the PLP cofactor to mitochondrial enzymes; involved in mitochondrial iron homeostasis","termid":"PBO:0084799"}


id: GO:1904156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN3 thymocyte. A DN3 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25+.","definition_xrefs":["GOC:dph","PMID:25398325","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN3 thymocyte differentiation","termid":"GO:1904156"}


id: PBO:0031710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitophagy","termid":"PBO:0031710"}


id: PBO:0084361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker nucleoporin component of the nuclear pore complex (NPC); also part of the NPC cytoplasmic filaments; contributes to nucleocytoplasmic transport and NPC biogenesis; forms stable associations with three FG-nucleoporins (Nsp1p, Nup159p, and Nup116p); relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084361"}


id: PBO:0073760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A13 pseudogene 1","termid":"PBO:0073760"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: PBO:0074317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 6","termid":"PBO:0074317"}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: GO:1901254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intracellular transport of viral material.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport of viral material","termid":"GO:1901252"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular transport of viral material","synonyms":[{"name":"activation of egress of virus within host cell","type":"narrow"},{"name":"activation of movement of virus within host cell","type":"exact"},{"name":"activation of viral egress","type":"exact"},{"name":"positive regulation of egress of virus within host cell","type":"related"},{"name":"positive regulation of movement of virus within host cell","type":"exact"},{"name":"positive regulation of viral egress","type":"exact"},{"name":"up regulation of egress of virus within host cell","type":"exact"},{"name":"up regulation of movement of virus within host cell","type":"exact"},{"name":"up regulation of viral egress","type":"exact"},{"name":"up-regulation of egress of virus within host cell","type":"exact"},{"name":"up-regulation of movement of virus within host cell","type":"exact"},{"name":"up-regulation of viral egress","type":"exact"},{"name":"upregulation of egress of virus within host cell","type":"exact"},{"name":"upregulation of movement of virus within host cell","type":"exact"},{"name":"upregulation of viral egress","type":"exact"}],"termid":"GO:1901254"}


id: PBO:0058700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6828","termid":"PBO:0058700"}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: FYPO:0001229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of all or part of the cell cortex is abnormal. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cortex morphology","termid":"FYPO:0001229"}


id: PBO:0087411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (17 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3","termid":"PBO:0087411"}


id: PR:000027549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:15226425","PMID:21516229","PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"Spom-HTA2/UnMod","type":"exact"}],"termid":"PR:000027549"}


id: GO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP reduction (obsolete GO:0006255)","synonyms":[{"name":"UDP reduction","type":"exact"}],"termid":"GO:0006255"}


id: PBO:0056739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 2","termid":"PBO:0056739"}


id: GO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0008233","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"serine-type aminopeptidase activity","termid":"GO:0070009"}


id: GO:0002282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microglial cell activation","termid":"GO:0001774"},{"relation_name":"is_a","term_name":"macrophage activation involved in immune response","termid":"GO:0002281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation involved in immune response","synonyms":[{"name":"microglial cell activation during immune response","type":"related"}],"termid":"GO:0002282"}


id: GO:0060495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the lung, from its initial state to the mature structure.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in lung development","synonyms":[{"name":"cell-cell signalling involved in lung development","type":"exact"}],"termid":"GO:0060495"}


id: PBO:0004845
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.1","termid":"PBO:0004845"}


id: GO:0021601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the abducens nerve to attain its fully functional state. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"abducens nerve development","termid":"GO:0021560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve maturation","synonyms":[{"name":"CN VI maturation","type":"related"}],"termid":"GO:0021601"}


id: GO:0045850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nurse cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nurse cell apoptotic process","termid":"GO:0045477"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"nurse cell apoptotic process","termid":"GO:0045476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nurse cell apoptotic process","synonyms":[{"name":"activation of nurse cell apoptosis","type":"narrow"},{"name":"positive regulation of nurse cell apoptosis","type":"narrow"},{"name":"stimulation of nurse cell apoptosis","type":"narrow"},{"name":"up regulation of nurse cell apoptosis","type":"exact"},{"name":"up-regulation of nurse cell apoptosis","type":"exact"},{"name":"upregulation of nurse cell apoptosis","type":"exact"}],"termid":"GO:0045850"}


id: PBO:0065536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 3","termid":"PBO:0065536"}


id: FYPO:0001374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex of a spore is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex in spores","termid":"FYPO:0001372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to medial cortex in spores","synonyms":[{"name":"protein localisation to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial cortex abolished in spores","type":"exact"},{"name":"protein localization to medial ring abolished in spores","type":"exact"}],"termid":"FYPO:0001374"}


id: SO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Right handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles: Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+2): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_right_handed_type_one","secondary_identifiers":["BS:00216"],"synonyms":[{"name":"beta turn right handed type one","type":"exact"},{"name":"beta_turn_ir","type":"exact"},{"name":"type I beta turn","type":"exact"},{"name":"type I turn","type":"exact"}],"termid":"SO:0001136"}


id: GO:0002782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antifungal peptide from a cell or a tissue.","definition_xrefs":["GOC:add","PMID:15638771","PMID:11807545","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"},{"relation_name":"part_of","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"antifungal peptide secretion","termid":"GO:0002782"}


id: GO:0048249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of phosphate from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:8709965","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transmembrane transporter activity","termid":"GO:0015114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity phosphate transmembrane transporter activity","synonyms":[{"name":"high affinity phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0048249"}


id: PBO:0054468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1867","termid":"PBO:0054468"}


id: GO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as a distinct genetic entity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of viral latency","termid":"GO:0019043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of episomal latency","synonyms":[{"name":"establishment as a plasmid prophage","type":"narrow"},{"name":"establishment of plasmid latency","type":"exact"}],"termid":"GO:0075720"}


id: PBO:0049794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic cell-specific Lyn substrate 1","termid":"PBO:0049794"}


id: GO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of dividing the cytoplasm of a parent cell where a structure forms in the cytoplasm and grows until reaching the plasma membrane, thereby completely separating the cytoplasms of adjacent progeny cells. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"cytokinesis by cell plate formation","termid":"GO:0000911"}


id: PBO:0062250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BQ member 1 pseudogene","termid":"PBO:0062250"}


id: GO:0150022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an apical dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:22683681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical dendrite development","termid":"GO:0150022"}


id: FYPO:0006606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows an abnormal temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal dynamic protein localization pattern","synonyms":[{"name":"abnormal dynamic pattern of protein localization","type":"exact"},{"name":"abnormal dynamic protein localisation pattern","type":"exact"},{"name":"abnormal protein exchange","type":"exact"},{"name":"abnormal protein turnover","type":"exact"},{"name":"abnormal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006606"}


id: PBO:0083771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential NTPase required for small ribosome subunit synthesis; mediates processing of the 20S pre-rRNA at site D in the cytoplasm but associates only transiently with 43S preribosomes via Rps14p; complex with Rps14 is conserved between humans, yeast, and arches; may be the endonuclease for site D; depletion leads to accumulation of pre-40S ribosomes in 80S-like ribosomes; human TAF9 functionally complements the lethality of the null mutation","termid":"PBO:0083771"}


id: PBO:0087231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seipin involved in lipid droplet (LD) assembly; controls lipid particle morphology, number, and size; promotes initiation of LD formation on the ER; ensures that LDs bud from the ER towards the cytosolic side of the membrane; forms a complex with Ldb16p at ER-LD contact sites, stabilizing these sites; null mutants have localized accumulation of phosphatidic acid (PA) marker proteins; BSCL2, human homolog implicated in congenital lipodystrophy, complements yeast null mutant","termid":"PBO:0087231"}


id: PBO:0050850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 3","termid":"PBO:0050850"}


id: GO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, microbial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antimicrobial peptide activity (obsolete GO:0003795)","synonyms":[{"name":"antimicrobial peptide activity","type":"exact"}],"termid":"GO:0003795"}


id: PBO:0067890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 192","termid":"PBO:0067890"}


id: PBO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 fusion partner 1","termid":"PBO:0045034"}


id: PBO:0086383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis","termid":"PBO:0086383"}


id: PBO:0084110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein regulator; binds to Hsp90p and may stimulate ATPase activity; originally identified as a high-copy number suppressor of a HSP90 loss-of-function mutation; role in regulating Hsp90 inhibitor drug sensitivity; GFP-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084110"}


id: GO:1903854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:kmv","PMID:23437011","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"negatively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress response to copper ion","synonyms":[{"name":"down regulation of response to copper ion stress","type":"exact"},{"name":"down regulation of response to copper toxicity","type":"related"},{"name":"down regulation of stress response to copper ion","type":"exact"},{"name":"down-regulation of response to copper ion stress","type":"exact"},{"name":"down-regulation of response to copper toxicity","type":"related"},{"name":"down-regulation of stress response to copper ion","type":"exact"},{"name":"downregulation of response to copper ion stress","type":"exact"},{"name":"downregulation of response to copper toxicity","type":"related"},{"name":"downregulation of stress response to copper ion","type":"exact"},{"name":"inhibition of response to copper ion stress","type":"narrow"},{"name":"inhibition of response to copper toxicity","type":"related"},{"name":"inhibition of stress response to copper ion","type":"narrow"},{"name":"negative regulation of response to copper ion stress","type":"exact"},{"name":"negative regulation of response to copper toxicity","type":"related"}],"termid":"GO:1903854"}


id: GO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response","termid":"GO:0031347"}


id: PBO:0002868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp51 (predicted)","termid":"PBO:0002868"}


id: GO:1903374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of a subarachnoid space over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:cjm","GOC:TermGenie","Wikipedia:Subarachnoid_space"],"gene_count":0,"genotype_count":0,"name":"obsolete subarachnoid space development (obsolete GO:1903374)","synonyms":[{"name":"cavitas subarachnoidea development","type":"related"},{"name":"cavum subarachnoideale development","type":"related"},{"name":"spatium leptomeningeum development","type":"related"},{"name":"spatium subarachnoideum development","type":"related"},{"name":"subarachnoid cavity development","type":"related"}],"termid":"GO:1903374"}


id: GO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R8 cell differentiation.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell differentiation","termid":"GO:0045679"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell differentiation","synonyms":[{"name":"down regulation of R8 differentiation","type":"exact"},{"name":"down-regulation of R8 differentiation","type":"exact"},{"name":"downregulation of R8 differentiation","type":"exact"},{"name":"inhibition of R8 differentiation","type":"narrow"},{"name":"negative regulation of R8 differentiation","type":"exact"}],"termid":"GO:0045680"}


id: PBO:0029292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mei2_nuclear_dot","termid":"PBO:0029292"}


id: PBO:0054792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2205","termid":"PBO:0054792"}


id: GO:0046619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_sensu","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens placode formation","termid":"GO:0001743"},{"relation_name":"part_of","term_name":"embryonic camera-type eye formation","termid":"GO:0060900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation involved in camera-type eye formation","synonyms":[{"name":"optic placode formation in camera-type eye","type":"exact"},{"name":"optic placode formation involved in camera-style eye","type":"exact"},{"name":"optic placode formation involved in camera-type eye formation","type":"related"}],"termid":"GO:0046619"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph","PMID:22269326","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: PBO:0070834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 13","termid":"PBO:0070834"}


id: GO:0018321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by amino acid glucuronylation, the addition of a glucuronate group, the uronic acid derived from glucose.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein glucuronylation","synonyms":[{"name":"protein amino acid glucuronylation","type":"exact"}],"termid":"GO:0018321"}


id: FYPO:0007698
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is absent.","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA strand exchange inhibitor activity","synonyms":[{"name":"DNA strand exchange inhibitor activity abolished","type":"exact"},{"name":"abolished RecA-family recombinase inhibitor activity","type":"exact"},{"name":"abolished negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007698"}


id: PBO:0041523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 78","termid":"PBO:0041523"}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["GOC:dos","PMID:25611509","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: PR:Q9P6L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.08","synonyms":[{"name":"Spom972h-srb8","type":"exact"},{"name":"mediator complex subunit 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B srb8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6L8"}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: GO:0102766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-naringenin(1-) + S-adenosyl-L-methionine = sakuranetin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.232","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"naringenin 7-O-methyltransferase activity","secondary_identifiers":["RHEA:31539","MetaCyc:RXN-7773"],"termid":"GO:0102766"}


id: PBO:0038305
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_level","termid":"PBO:0038305"}


id: GO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipoprotein particle and delivering the lipoprotein particle into the cell via endocytosis. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["GOC:mah","GOC:bf","PMID:12827279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"lipoprotein particle receptor activity","synonyms":[{"name":"lipoprotein receptor activity","type":"exact"},{"name":"plasma lipoprotein particle receptor activity","type":"narrow"}],"termid":"GO:0030228"}


id: PBO:0088902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms2","termid":"PBO:0088902"}


id: GO:0033570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of transferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete transferrin transmembrane transporter activity (obsolete GO:0033570)","termid":"GO:0033570"}


id: GO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (betaine or gamma-aminobutyric acid)(out) + Na+(out) = (betaine or gamma-aminobutyric acid)(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete betaine/GABA:sodium symporter activity (obsolete GO:0015376)","synonyms":[{"name":"betaine/GABA:sodium symporter activity","type":"exact"}],"termid":"GO:0015376"}


id: PBO:0077857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 2","termid":"PBO:0077857"}


id: GO:0070597
data:
  {"annotated_genes":["SJAG_04236","SJAG_04666","SJAG_02916","SJAG_04184","SJAG_01028","SJAG_00610","SJAG_03057","SJAG_02278","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77596,72934,71595,73117,70810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[88058,90529,98292,85177],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070597","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: GO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive hypha growth (obsolete GO:0075062)","synonyms":[{"name":"regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075062"}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: GO:0022829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a large pore, un-gated channel. Examples include gap junctions, which transport substances from one cell to another; and porins which transport substances in and out of bacteria, mitochondria and chloroplasts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"wide pore channel activity","synonyms":[{"name":"gap junction activity","type":"narrow"},{"name":"non-gated, wide pore channel activity","type":"exact"}],"termid":"GO:0022829"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["UniProtKB:Q9P6S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: GO:0009288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope.","definition_xrefs":["GOC:cilia","GOC:jh2","GOC:krc","GOC:mtg_sensu","PMID:7787060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"},{"relation_name":"is_a","term_name":"non-membrane-bounded organelle","termid":"GO:0043228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum","synonyms":[{"name":"flagellin-based flagellum","type":"exact"}],"termid":"GO:0009288"}


id: GO:1905690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a nucleus into its constituent components.","definition_xrefs":["GOC:autophagy","GOC:pr","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus disassembly","synonyms":[{"name":"cell nucleus disassembly","type":"exact"}],"termid":"GO:1905690"}


id: PBO:0064423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 1","termid":"PBO:0064423"}


id: GO:0000703
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[91727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal oxidized pyrimidine bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar. The reaction involves formation of a covalent enzyme-pyrimidine base intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110226","GO:0019004","Reactome:R-HSA-110224","Reactome:R-HSA-110227"],"synonyms":[{"name":"DNA glycosylase/AP-lyase","type":"broad"},{"name":"DNA glycosylase/beta-lyase","type":"broad"},{"name":"bifunctional DNA glycosylase","type":"broad"},{"name":"endodeoxyribonuclease III","type":"related"},{"name":"endonuclease III","type":"related"},{"name":"endonuclease VIII activity","type":"related"},{"name":"oxidized pyrimidine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"pyrimidine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0000703","terms_by_termid":{"GO:0034042":null,"GO:0034043":null}}


id: GO:0010506
data:
  {"annotated_genes":["SJAG_04502","SJAG_00704","SJAG_04655","SJAG_02433","SJAG_04232","SJAG_04249","SJAG_01716","SJAG_05000","SJAG_04435","SJAG_00824","SJAG_02765","SJAG_01509","SJAG_05346","SJAG_04496","SJAG_00169","SJAG_00004","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68613,72567,77215,78157],"is_not":false,"summary":null,"term":"GO:0010506"},{"annotations":[102027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[93170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[94954,102759,73322,94408,104988,109781,107102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[69220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[74841,101644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[85249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00169":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01509":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05000":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0010506","terms_by_termid":{"GO:0010506":null,"GO:0010508":null,"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null}}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: GO:0090567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive shoot system development","termid":"GO:0090567"}


id: PBO:0083705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER localized heme oxygenase; involved in heme degradation during iron starvation and in the oxidative stress response; expression is regulated by AFT1 and oxidative stress; relocates to the perinuclear region in the presence of oxidants","termid":"PBO:0083705"}


id: GO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside biosynthetic process","termid":"GO:0046132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cytidine biosynthetic process","synonyms":[{"name":"cytidine anabolism","type":"exact"},{"name":"cytidine biosynthesis","type":"exact"},{"name":"cytidine formation","type":"exact"},{"name":"cytidine synthesis","type":"exact"}],"termid":"GO:0046088"}


id: GO:0035240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dopamine, a catecholamine neurotransmitter formed by aromatic-L-amino-acid decarboxylase from 3,4-dihydroxy-L-phenylalanine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"catecholamine binding","termid":"GO:1901338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dopamine binding","termid":"GO:0035240"}


id: PATO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preference","termid":"PATO:0000773"}


id: FYPO:0001948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of substance in cytosol","synonyms":[{"name":"increased cytosolic level of substance","type":"exact"},{"name":"increased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"increased level of substance in cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0001948"}


id: PBO:0016894
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lammer Kinase Homolog","termid":"PBO:0016894"}


id: PBO:0040181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 2","termid":"PBO:0040181"}


id: PBO:0057717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-2 host gene","termid":"PBO:0057717"}


id: GO:0071110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by the addition of a biotinyl group.","definition_xrefs":["GOC:rph","PMID:19019041","PMID:14613969"],"gene_count":0,"genotype_count":0,"name":"obsolete histone biotinylation (obsolete GO:0071110)","termid":"GO:0071110"}


id: GO:1904142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:25675505","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of carotenoid biosynthetic process","synonyms":[{"name":"down regulation of carotenoid anabolism","type":"exact"},{"name":"down regulation of carotenoid biosynthesis","type":"exact"},{"name":"down regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down regulation of carotenoid formation","type":"exact"},{"name":"down regulation of carotenoid synthesis","type":"exact"},{"name":"down-regulation of carotenoid anabolism","type":"exact"},{"name":"down-regulation of carotenoid biosynthesis","type":"exact"},{"name":"down-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"down-regulation of carotenoid formation","type":"exact"},{"name":"down-regulation of carotenoid synthesis","type":"exact"},{"name":"downregulation of carotenoid anabolism","type":"exact"},{"name":"downregulation of carotenoid biosynthesis","type":"exact"},{"name":"downregulation of carotenoid biosynthetic process","type":"exact"},{"name":"downregulation of carotenoid formation","type":"exact"},{"name":"downregulation of carotenoid synthesis","type":"exact"},{"name":"inhibition of carotenoid anabolism","type":"narrow"},{"name":"inhibition of carotenoid biosynthesis","type":"narrow"},{"name":"inhibition of carotenoid biosynthetic process","type":"narrow"},{"name":"inhibition of carotenoid formation","type":"narrow"},{"name":"inhibition of carotenoid synthesis","type":"narrow"},{"name":"negative regulation of carotenoid anabolism","type":"exact"},{"name":"negative regulation of carotenoid biosynthesis","type":"exact"},{"name":"negative regulation of carotenoid formation","type":"exact"},{"name":"negative regulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904142"}


id: GO:0050248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Renilla luciferin + O2 = oxidized Renilla luciferin + CO2 + light.","definition_xrefs":["MetaCyc:RENILLA-LUCIFERIN-2-MONOOXYGENASE-RXN","EC:1.13.12.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"Renilla-luciferin 2-monooxygenase activity","secondary_identifiers":["RHEA:14765"],"synonyms":[{"name":"Renilla-luciferin:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"Renilla-type luciferase activity","type":"related"},{"name":"aequorin activity","type":"narrow"},{"name":"luciferase (Renilla luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0050248"}


id: PBO:0090145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16","termid":"PBO:0090145"}


id: PBO:0045467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D4","termid":"PBO:0045467"}


id: GO:0031877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"somatostatin receptor binding","synonyms":[{"name":"somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031877"}


id: GO:1900284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellobiose catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of cellobiose catabolic process","termid":"GO:1900282"},{"relation_name":"is_a","term_name":"positive regulation of cellobiose metabolic process","termid":"GO:2000932"},{"relation_name":"positively_regulates","term_name":"cellobiose catabolic process","termid":"GO:2000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellobiose catabolic process","synonyms":[{"name":"activation of cellobiose catabolic process","type":"narrow"},{"name":"activation of cellobiose catabolism","type":"narrow"},{"name":"positive regulation of cellobiose catabolism","type":"exact"},{"name":"up regulation of cellobiose catabolic process","type":"exact"},{"name":"up regulation of cellobiose catabolism","type":"exact"},{"name":"up-regulation of cellobiose catabolic process","type":"exact"},{"name":"up-regulation of cellobiose catabolism","type":"exact"},{"name":"upregulation of cellobiose catabolic process","type":"exact"},{"name":"upregulation of cellobiose catabolism","type":"exact"}],"termid":"GO:1900284"}


id: GO:0009492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2Fe-2S electron transfer carrier (obsolete GO:0009492)","synonyms":[{"name":"2Fe-2S electron transfer carrier","type":"exact"}],"termid":"GO:0009492"}


id: PBO:0041368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 46","termid":"PBO:0041368"}


id: GO:0005665
data:
  {"annotated_genes":["SJAG_02070","SJAG_04030","SJAG_01765","SJAG_00458","SJAG_04559","SJAG_01436","SJAG_01313","SJAG_02101","SJAG_00119","SJAG_04261","SJAG_02506","SJAG_04894","SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71209,72621,72989,73995,74565,75056,75137,75664,76032,76947,77742,104590,108080],"is_not":false,"summary":null,"term":"GO:0005665"}]},"cv_name":"cellular_component","definition":"RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA-directed RNA polymerase complex","termid":"GO:0055029"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04559":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase II, core complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"DNA-directed RNA polymerase II, core complex","type":"exact"},{"name":"RNA polymerase II complex","type":"broad"},{"name":"RNAP II complex","type":"broad"}],"termid":"GO:0005665","terms_by_termid":{"GO:0005665":null}}


id: PR:Q10326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug8 gene.","definition_xrefs":["UniProtKB:Q10326","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 8 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.01","synonyms":[{"name":"Spom972h-mug8","type":"exact"}],"termid":"PR:Q10326"}


id: PR:P48008
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.01","synonyms":[{"name":"Spom972h-spn3","type":"exact"}],"termid":"PR:P48008"}


id: GO:0046562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + O2 = D-glucono-1,5-lactone + H2O2.","definition_xrefs":["EC:1.1.3.4","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose oxidase activity","termid":"GO:0047979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucose oxidase activity","secondary_identifiers":["RHEA:11428","KEGG_REACTION:R01522","MetaCyc:GLUCOSE-OXIDASE-RXN"],"synonyms":[{"name":"D-glucose oxidase activity","type":"related"},{"name":"D-glucose-1-oxidase activity","type":"related"},{"name":"GOD activity","type":"related"},{"name":"beta-D-glucose oxidase activity","type":"exact"},{"name":"beta-D-glucose:oxygen 1-oxido-reductase activity","type":"related"},{"name":"beta-D-glucose:oxygen 1-oxidoreductase activity","type":"related"},{"name":"beta-D-glucose:quinone oxidoreductase activity","type":"related"},{"name":"corylophyline","type":"related"},{"name":"deoxin-1","type":"related"},{"name":"glucose aerodehydrogenase activity","type":"related"},{"name":"glucose oxyhydrase activity","type":"related"},{"name":"microcid","type":"related"},{"name":"penatin","type":"related"}],"termid":"GO:0046562"}


id: GO:0051030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"snRNA transport","termid":"GO:0051030"}


id: PBO:0053363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 272","termid":"PBO:0053363"}


id: PBO:0041811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CARHSP1 divergent transcript","termid":"PBO:0041811"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: GO:0070832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with three consecutive N-methylation steps that are carried out on phospho-bases, phosphoethanolamine, phospho-N-methylethanolamine, and phospho-N-dimethylethanolamine; the process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via N-dimethylethanolamine phosphate and CDP-choline","termid":"GO:0070832"}


id: PBO:0051825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 2 binding protein 1","termid":"PBO:0051825"}


id: GO:0032266
data:
  {"annotated_genes":["SJAG_02248","SJAG_01382","SJAG_03851","SJAG_04219","SJAG_04024","SJAG_00115","SJAG_00971","SJAG_01519","SJAG_01783","SJAG_00638","SJAG_01135","SJAG_04010","SJAG_02587","SJAG_00173","SJAG_03250","SJAG_00314","SJAG_04963"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70716,71850,72910,73371,78552,86284,87161,91515,95198,95334,95335,100234,104955,105101,105296,107701,110405],"is_not":false,"summary":null,"term":"GO:0032266"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position.","definition_xrefs":["GOC:bf","PMID:11557775","PMID:10209156","PMID:11395417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00173":null,"SJAG_00314":null,"SJAG_00638":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_01519":null,"SJAG_01783":null,"SJAG_02248":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04219":null,"SJAG_04963":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"PtdIns-3-P binding","type":"exact"},{"name":"phosphatidylinositol 3-phosphate binding","type":"exact"}],"termid":"GO:0032266","terms_by_termid":{"GO:0032266":null}}


id: PBO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium_export","termid":"PBO:0030484"}


id: GO:1990200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing an alkanesulfonate monooxygenase subunit (SsuD tetramer in E.coli) and a flavin oxidoreductase subunit (SsuE dimer in E.coli). Involved in the utilization of alkanesulfonates as sulfur sources under conditions of sulfate or cysteine starvation.","definition_xrefs":["PMID:16997955","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"SsuD-SsuE complex","synonyms":[{"name":"two-component alkanesulfonate monooxygenase system","type":"related"}],"termid":"GO:1990200"}


id: PBO:0017729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Use1 (predicted)","termid":"PBO:0017729"}


id: GO:0031506
data:
  {"annotated_genes":["SJAG_01021","SJAG_01276","SJAG_00598","SJAG_04770","SJAG_01491","SJAG_03082","SJAG_04906","SJAG_00816","SJAG_02519","SJAG_04316","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83293,76964,74121,88656,74318,78894,99519,78058,71910,76109,76408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01491":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04316":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cell wall glycoprotein anabolism","type":"exact"},{"name":"cell wall glycoprotein biosynthesis","type":"exact"},{"name":"cell wall glycoprotein formation","type":"exact"},{"name":"cell wall glycoprotein synthesis","type":"exact"}],"termid":"GO:0031506","terms_by_termid":{"GO:0000032":null}}


id: GO:0051713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the cytolysis of cells in another organism.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in another organism (obsolete GO:0051713)","synonyms":[{"name":"down regulation of cytolysis of cells of another organism","type":"exact"},{"name":"down-regulation of cytolysis of cells of another organism","type":"exact"},{"name":"downregulation of cytolysis of cells of another organism","type":"exact"},{"name":"inhibition of cytolysis of cells of another organism","type":"narrow"},{"name":"negative regulation of cytolysis in other organism","type":"exact"},{"name":"negative regulation of cytolysis of cells of another organism","type":"exact"}],"termid":"GO:0051713"}


id: PBO:0047627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO induced long non-coding RNA 1","termid":"PBO:0047627"}


id: PBO:0028359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ATPase_activity","termid":"PBO:0028359"}


id: PBO:0058292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666b","termid":"PBO:0058292"}


id: GO:0021682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve maturation","termid":"GO:0021682"}


id: GO:0047349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + CTP = CDP-ribitol + diphosphate.","definition_xrefs":["EC:2.7.7.40","RHEA:12456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"D-ribitol-5-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02921","MetaCyc:2.7.7.40-RXN"],"synonyms":[{"name":"CDP ribitol pyrophosphorylase activity","type":"related"},{"name":"CDP-ribitol diphosphorylase activity","type":"related"},{"name":"CDP-ribitol pyrophosphorylase activity","type":"related"},{"name":"CTP:D-ribitol-5-phosphate cytidylyltransferase activity","type":"exact"},{"name":"cytidine diphosphate ribitol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoribitol pyrophosphorylase activity","type":"related"},{"name":"ribitol 5-phosphate cytidylyltransferase activity","type":"related"}],"termid":"GO:0047349"}


id: PBO:0040191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 4","termid":"PBO:0040191"}


id: GO:0050833
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76173,90005],"is_not":false,"summary":null,"term":"GO:0050833"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyruvate, 2-oxopropanoate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-372342"],"synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0050833","terms_by_termid":{"GO:0050833":null}}


id: PBO:0031084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_phenotype","termid":"PBO:0031084"}


id: PBO:0068231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 2","termid":"PBO:0068231"}


id: PR:Q96WW4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ivn1 gene.","definition_xrefs":["UniProtKB:Q96WW4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasion protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.07c","synonyms":[{"name":"Spom972h-ivn1","type":"exact"}],"termid":"PR:Q96WW4"}


id: GO:0000377
data:
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id: GO:0034178
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id: GO:0003813
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id: GO:0106262
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id: FYPO:0000443
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type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_02392","SJAG_01050","SJAG_05207","SJAG_03596","SJAG_01143"],"name":"abnormal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_04489","SJAG_01050","SJAG_02392","SJAG_04280","SJAG_05207","SJAG_03892","SJAG_03783","SJAG_01745"],"single_locus_genotype_uniquenames":["did4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps4delta","mid1delta","pom1delta","vps24delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","cmp7delta"],"synonyms":[{"name":"abnormal cellular protein localisation during vegetative growth","type":"exact"},{"name":"abnormal cellular protein localization during vegetative growth","type":"exact"},{"name":"abnormal protein localisation during vegetative growth","type":"exact"},{"name":"abnormal protein localization during mitotic cell cycle","type":"related"},{"name":"protein/peptide distribution: abnormal","type":"related"}],"termid":"FYPO:0000443","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000731":null,"FYPO:0001132":null,"FYPO:0002870":null,"FYPO:0003657":null,"FYPO:0003946":null,"FYPO:0005503":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0088419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex TPR repeat subunit Mgr3","termid":"PBO:0088419"}


id: PBO:0065854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 5","termid":"PBO:0065854"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: GO:0016915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A nonsteroidal regulator, composed of two covalently linked beta subunits, that is synthesized in the pituitary gland and gonads and stimulates the secretion of follicle-stimulating hormone.","definition_xrefs":["ISBN:0198506732","ISBN:0721662544"],"gene_count":0,"genotype_count":0,"name":"obsolete activin (obsolete GO:0016915)","synonyms":[{"name":"activin","type":"exact"}],"termid":"GO:0016915"}


id: FYPO:0005039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","GO:0071619","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during nitrogen starvation","termid":"FYPO:0005034"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen depletion","type":"exact"},{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005039"}


id: GO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid.","definition_xrefs":["GOC:ai","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase inhibitor activity","termid":"GO:0055102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0004857","GO:0003674","GO:0030234","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"phospholipase inhibitor activity","termid":"GO:0004859"}


id: FYPO:0002011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally induced by exposure to hydrogen peroxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of hydrogen peroxide-induced proteins during vegetative growth","synonyms":[{"name":"increased level of H2O2-induced proteins during vegetative growth","type":"exact"},{"name":"increased level of hydrogen peroxide-induced proteins during mitotic cell cycle","type":"related"},{"name":"increased level of proteins expressed during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased level of proteins induced by hydrogen peroxide during vegetative growth","type":"exact"},{"name":"increased protein level of genes (normally) induced during H2O2 stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002011"}


id: GO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + L-glutamate; and H2O + L-asparagine = NH3 + L-aspartate.","definition_xrefs":["EC:3.5.1.38","MetaCyc:GLUTAMINASE-ASPARAGIN-ASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"glutamin-(asparagin-)ase activity","secondary_identifiers":["MetaCyc:ASPARAGHYD-RXN","MetaCyc:GLUTAMIN-RXN"],"synonyms":[{"name":"L-ASNase/L-GLNase activity","type":"related"},{"name":"L-asparagine/L-glutamine amidohydrolase activity","type":"related"},{"name":"L-glutamine(L-asparagine) amidohydrolase activity","type":"related"},{"name":"glutaminase-(asparagin-)ase activity","type":"exact"},{"name":"glutaminase-asparaginase activity","type":"related"}],"termid":"GO:0050417"}


id: GO:0035970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-threonine to form peptidyl-threonine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine dephosphorylation","termid":"GO:0035970"}


id: PBO:0087499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; maintains structural integrity of Elongator; homolog of human IKAP, mutations in which cause familial dysautonomia (FD)","termid":"PBO:0087499"}


id: GO:0099531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"presynaptic process involved in chemical synaptic transmission","termid":"GO:0099531"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: PBO:0052675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 43","termid":"PBO:0052675"}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


id: GO:0097311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["Wikipedia:Biofilm","GOC:imk","PMID:22571672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm matrix","termid":"GO:0062039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial biofilm matrix","termid":"GO:0097311"}


id: PR:Q09719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24031:SF17","OMA:SCHPO00156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.07c","secondary_identifiers":["UniProtKB:Q09719"],"synonyms":[{"name":"Spom972h-DDX54","type":"exact"}],"termid":"PR:Q09719"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0050485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A13","termid":"PBO:0050485"}


id: PBO:0058520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5708","termid":"PBO:0058520"}


id: GO:0110140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum attachment zone. FAZ is a network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["PMID:26776656","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellum attachment zone organization","synonyms":[{"name":"FAZ organization","type":"exact"},{"name":"flagellum attachment zone organisation","type":"exact"}],"termid":"GO:0110140"}


id: PBO:0085185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three repressible acid phosphatases; glycoprotein that is transported to the cell surface by the secretory pathway; pregulated by phosphate starvation; PHO12 has a paralog, PHO11, that arose from a segmental duplication","termid":"PBO:0085185"}


id: PBO:0028437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_miconazole","termid":"PBO:0028437"}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: PBO:0049693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAO2 intronic transcript 1","termid":"PBO:0049693"}


id: PBO:0073954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 3","termid":"PBO:0073954"}


id: PBO:0028457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_morphology","termid":"PBO:0028457"}


id: PBO:0052843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-3","termid":"PBO:0052843"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: GO:0120140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity.","definition_xrefs":["PMID:17097615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"},{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","termid":"GO:0120138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity","termid":"GO:0120140"}


id: PBO:0046311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease V","termid":"PBO:0046311"}


id: GO:1902119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic spindle elongation.","definition_xrefs":["PMID:23370392","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle elongation","termid":"GO:0032887"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic spindle elongation","termid":"GO:0051232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic spindle elongation","synonyms":[{"name":"regulation of spindle elongation during meiosis","type":"exact"}],"termid":"GO:1902119"}


id: PBO:0052087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 3","termid":"PBO:0052087"}


id: GO:0061848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.","definition_xrefs":["PMID:14622258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cholecystokinin","termid":"GO:0061847"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cholecystokinin","termid":"GO:0061848"}


id: FYPO:0004430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins earlier than normal, e.g. before the mitotic spindle has completely disassembled. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["GO:1902404","PomBase:mah","PMID:19029336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"premature actomyosin contractile ring contraction","synonyms":[{"name":"advanced actomyosin contractile ring contraction","type":"exact"},{"name":"decreased dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"premature actomyosin contractile ring constriction","type":"exact"},{"name":"premature actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"premature actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"premature contractile ring contraction","type":"exact"},{"name":"premature cytokinetic contractile ring contraction","type":"exact"},{"name":"premature mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"premature mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004430"}


id: PR:O94523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1281.06c gene.","definition_xrefs":["UniProtKB:O94523","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.06c","synonyms":[{"name":"Spom972h-SPCC1281.06c","type":"exact"},{"name":"delta(9)-desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-9 desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"fatty acid desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"stearoyl-CoA desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94523"}


id: GO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in cell wall organization or biogenesis (obsolete GO:0000197)","synonyms":[{"name":"activation of MAP kinase kinase kinase activity during cell wall biogenesis","type":"exact"},{"name":"activation of MAPKKK activity involved in cell wall biogenesis","type":"related"},{"name":"activation of MAPKKK activity involved in cell wall integrity","type":"exact"},{"name":"cell wall biogenesis, activation of MAP kinase kinase kinase activity","type":"exact"},{"name":"cell wall biogenesis, activation of MAPKKK activity","type":"exact"}],"termid":"GO:0000197"}


id: PR:Q9Y7Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SLU7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12942:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor slu7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.05c","secondary_identifiers":["UniProtKB:Q9Y7Y2"],"synonyms":[{"name":"SPBC365.05c","type":"related"},{"name":"Spom972h-SLU7","type":"exact"}],"termid":"PR:Q9Y7Y2"}


id: PBO:0042927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 7","termid":"PBO:0042927"}


id: PBO:0065315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 38","termid":"PBO:0065315"}


id: GO:0030364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A factor required in mRNA 3' end processing for both the cleavage and poly(A) addition reactions and, consistent with this function, recognizes AAUAAA, a signal also essential for both reactions.","definition_xrefs":["PMID:10357856"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage and polyadenylylation specificity factor activity (obsolete GO:0030364)","synonyms":[{"name":"CPSF","type":"exact"},{"name":"cleavage and polyadenylation specificity factor activity","type":"exact"},{"name":"cleavage and polyadenylylation specificity factor activity","type":"exact"},{"name":"cleavage/polyadenylation specificity factor activity","type":"exact"}],"termid":"GO:0030364"}


id: PR:O74326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) RNA polymerase cid11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.06","synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cid11","type":"exact"},{"name":"caffeine-induced death protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide adenylyltransferase cid11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74326"}


id: PBO:0081553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 473","termid":"PBO:0081553"}


id: FYPO:0002641
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to micafungin. Cells stop growing (and may die) at a concentration of micafungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to micafungin","synonyms":[{"name":"hypersensitive to micafungin","type":"exact"},{"name":"sensitive to micafungin during mitotic cell cycle","type":"related"},{"name":"sensitive to micafungin during vegetative growth","type":"exact"}],"termid":"FYPO:0002641"}


id: GO:0031247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules.","definition_xrefs":["PMID:14706699","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin rod assembly","synonyms":[{"name":"actin rod formation","type":"related"}],"termid":"GO:0031247"}


id: GO:0006483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-aspartic acid or asparagine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-aspartic acid/asparagine hydroxylation (obsolete GO:0006483)","synonyms":[{"name":"aspartic acid/asparagine hydroxylation","type":"exact"},{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"exact"}],"termid":"GO:0006483"}


id: MOD:01612
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-iodo-L-tyrosine.","definition_xrefs":["RESID:AA0509","ChEBI:27847","PubMed:8995307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoiodinated tyrosine","termid":"MOD:01228"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-iodo-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3-iodophenyl)propanoic acid","type":"exact"},{"name":"3'-iodo-L-tyrosine","type":"exact"},{"name":"3-iodo-L-tyrosine","type":"exact"},{"name":"3-iodotyrosine","type":"exact"},{"name":"4-hydroxy-3-iodo-phenylalanine","type":"exact"},{"name":"MIT","type":"exact"},{"name":"MOD_RES Iodotyrosine","type":"exact"}],"termid":"MOD:01612"}


id: PBO:0042007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 62","termid":"PBO:0042007"}


id: GO:0033441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"AAU codon-amino acid adaptor activity","synonyms":[{"name":"AAT codon-amino acid adaptor activity","type":"exact"},{"name":"asparagine tRNA","type":"related"}],"termid":"GO:0033441"}


id: GO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of SNARE complex disassembly","termid":"GO:0035495"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of SNARE complex disassembly","termid":"GO:0035540"}


id: GO:0060272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A skeletal joint is the connecting structure between the bones of the skeleton.","definition_xrefs":["GOC:BHF","UBERON:0000982","GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"}


id: PBO:0042774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP83 divergent transcript","termid":"PBO:0042774"}


id: PBO:0041263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q binding protein","termid":"PBO:0041263"}


id: GO:0097131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin D1-CDK6 complex","termid":"GO:0097131"}


id: PBO:0045230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC17 pseudogene 1","termid":"PBO:0045230"}


id: FYPO:0003749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of m7G(5')pppN diphosphatase activity does not occur.","definition_xrefs":["PMID:22323607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity during vegetative growth","type":"exact"},{"name":"positive regulation of m7G(5')pppN diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0003749"}


id: GO:0039713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular compartment in a host cell which increases the efficiency of viral replication, and shields the virus from host defenses. Viral factories can be either cytoplasmic or nuclear and often arise from extensive rearrangement of host cell cytoskeletal and/or cell membrane compartments.","definition_xrefs":["PMID:22440839","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral factory","synonyms":[{"name":"virus factory","type":"exact"}],"termid":"GO:0039713"}


id: GO:1901725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone deacetylase activity.","definition_xrefs":["GOC:BHF","PMID:20497126","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylase activity (obsolete GO:1901725)","termid":"GO:1901725"}


id: PBO:0075876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL3 antisense RNA 1","termid":"PBO:0075876"}


id: MOD:00338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-cyano-L-cysteine.","definition_xrefs":["Unimod:438#C","PubMed:12586941","PubMed:4808702","RESID:AA0333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-cyano-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-thiocyanatopropanoic acid","type":"exact"},{"name":"Cyano","type":"related"},{"name":"MOD_RES S-cyanocysteine","type":"exact"},{"name":"S-cyano-L-cysteine","type":"exact"},{"name":"S-cyanocysteine","type":"exact"},{"name":"alpha-amino-beta-thiocyanatopropionic acid","type":"exact"},{"name":"beta-thiocyanatoalanine","type":"exact"},{"name":"cyano","type":"related"},{"name":"serine thiocyanic acid ester","type":"exact"}],"termid":"MOD:00338"}


id: PBO:0040828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 3","termid":"PBO:0040828"}


id: PBO:0063567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase B","termid":"PBO:0063567"}


id: GO:0009263
data:
  {"annotated_genes":["SJAG_02874","SJAG_02948","SJAG_00885","SJAG_03771","SJAG_04657","SJAG_04487","SJAG_04665","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[88069,91073,102620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[78331,103713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88071,70964,85118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[70962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[103714,78002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"deoxyribonucleotide metabolic process","termid":"GO:0009262"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"deoxyribonucleotide anabolism","type":"exact"},{"name":"deoxyribonucleotide biosynthesis","type":"exact"},{"name":"deoxyribonucleotide formation","type":"exact"},{"name":"deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009263","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: GO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein localization process in which progeny cells acquire, or are barred from acquiring, proteins that have been altered by reaction with reactive oxygen species in dividing aging cells.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inheritance of oxidatively modified proteins involved in replicative cell aging (obsolete GO:0001319)","synonyms":[{"name":"inheritance of oxidatively modified proteins during replicative cell ageing","type":"related"},{"name":"inheritance of oxidatively modified proteins during replicative cell aging","type":"related"}],"termid":"GO:0001319"}


id: PBO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatasePtn1","termid":"PBO:0004384"}


id: GO:0008427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a calcium-dependent protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"},{"relation_name":"is_a","term_name":"calcium-dependent protein kinase regulator activity","termid":"GO:0010858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0004857","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"calcium-dependent protein kinase inhibitor activity","termid":"GO:0008427"}


id: GO:0034753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor (AhR) complex found in the nucleus; ; consists of ligand-bound AhR and the aryl hydrocarbon receptor nuclear translocator (ARNT).","definition_xrefs":["PMID:7598497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear aryl hydrocarbon receptor complex","synonyms":[{"name":"6S-nuclear aryl hydrocarbon (Ah) receptor ligand-activated complex","type":"related"},{"name":"nuclear AHRC","type":"exact"},{"name":"nuclear AhR complex","type":"exact"}],"termid":"GO:0034753"}


id: MOD:01374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification that effectively oxygenates C5 of an L-leucine residue to form a (2S,4R)-5-oxoleucine.","definition_xrefs":["PubMed:16858410","ChEBI:43739","RESID:AA0444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-5-oxoleucine","synonyms":[{"name":"(2S,4R)-2-amino-4-methyl-5-oxopentanoic acid","type":"exact"},{"name":"(2S,4R)-5-oxoleucine","type":"exact"},{"name":"(4R)-5-oxo-L-leucine","type":"exact"}],"termid":"MOD:01374"}


id: PBO:0081180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16B","termid":"PBO:0081180"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: FYPO:0002680
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114155],"is_not":false,"summary":null,"term":"FYPO:0002680"},{"annotations":[114152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_02592":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01787"],"single_locus_genotype_uniquenames":["sty1delta","pck1delta"],"termid":"FYPO:0002680","terms_by_termid":{"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0002680":null}}


id: PBO:0074368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm mitochondria associated cysteine rich protein","termid":"PBO:0074368"}


id: PBO:0055429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2859","termid":"PBO:0055429"}


id: PBO:0015239
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(8)","termid":"PBO:0015239"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["DeltaMass:0","PubMed:1680872","RESID:AA0202#var","Unimod:452","PubMed:10747868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: PBO:0034586
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_tip_during_mitosis","termid":"PBO:0034586"}


id: GO:0089716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex consisting of Zn(2)Cys(6) containing transcription factors Pip2 and Oaf1. It binds to the oleate response element (ORE), found in the promoters of fatty acid-inducible genes in Saccharomyces where, in the presence of oleate this bound complex activates the transcription of genes encoding peroxisomal proteins.","definition_xrefs":["PMID:8972187","PMID:9288897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Pip2-Oaf1 complex","termid":"GO:0089716"}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: GO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + raucaffricine = D-glucose + vomilenine.","definition_xrefs":["RHEA:14557","EC:3.2.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"raucaffricine beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03703","MetaCyc:RAUCAFFRICINE-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"raucaffricine b-glucosidase activity","type":"exact"},{"name":"raucaffricine beta-D-glucohydrolase activity","type":"related"},{"name":"raucaffricine beta-D-glucosidase activity","type":"related"},{"name":"raucaffricine glucosidase activity","type":"related"}],"termid":"GO:0050247"}


id: GO:0040030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heritable epigenetic process that modulates the frequency, rate or extent of protein function by self-perpetuating conformational conversions of normal proteins in healthy cells. This is distinct from, though mechanistically analogous to, disease states associated with prion propagation and amyloidogenesis. A single protein, if it carries a glutamine/asparagine-rich ('prion') domain, can sometimes stably exist in at least two distinct physical states, each associated with a different phenotype; propagation of one of these traits is achieved by a self-perpetuating change in the protein from one form to the other, mediated by conformational changes in the glutamine/asparagine-rich domain. Prion domains are both modular and transferable to other proteins, on which they can confer a heritable epigenetic alteration of function; existing bioinformatics data indicate that they are rare in non-eukarya, but common in eukarya.","definition_xrefs":["PMID:11447696","PMID:11782551","GOC:ems","PMID:11685242","GOC:tb","PMID:10611975","PMID:11050225","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of molecular function, epigenetic (obsolete GO:0040030)","synonyms":[{"name":"regulation of protein activity, epigenetic","type":"exact"}],"termid":"GO:0040030"}


id: GO:0052189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the deposition of callose by the host in its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host cell wall callose deposition (obsolete GO:0052189)","synonyms":[{"name":"modulation by organism of defense-related callose deposition of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related cell wall callose deposition in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of defense-related host callose deposition","type":"broad"}],"termid":"GO:0052189"}


id: PBO:0038567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein 1","termid":"PBO:0038567"}


id: GO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase III transcription factor binding (obsolete GO:0001007)","synonyms":[{"name":"RNA polymerase III transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001007"}


id: PBO:0077127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TINAG antisense RNA 1","termid":"PBO:0077127"}


id: GO:0021612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the facial nerve. This process pertains to the physical shaping of a rudimentary structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial opthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"facial nerve morphogenesis","termid":"GO:0021610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve structural organization","synonyms":[{"name":"CN VII structural organization","type":"related"},{"name":"facial nerve structural organisation","type":"exact"}],"termid":"GO:0021612"}


id: PBO:0109811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane dislocase Msp1/Yta4","termid":"PBO:0109811"}


id: PBO:0089068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L57","termid":"PBO:0089068"}


id: PBO:0059984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 4","termid":"PBO:0059984"}


id: GO:0019331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of ammonium (NH4) to nitrogen (N2) in the absence of oxygen, using nitrite (NO2) as the electron acceptor. It is suggested that hydroxylamine and ammonium are combined to yield hydrazine, which is subsequently oxidized to N2.","definition_xrefs":["MetaCyc:P303-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"ammonia oxidation","termid":"GO:0019329"},{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"anaerobic respiration, using ammonium as electron donor","secondary_identifiers":["Wikipedia:Anammox"],"synonyms":[{"name":"anaerobic ammonium oxidation","type":"broad"},{"name":"anammox","type":"exact"}],"termid":"GO:0019331"}


id: PBO:0002096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet dependent proline dimethyltransferase involved in translation Tea1 (predicted)","termid":"PBO:0002096"}


id: PBO:0031896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor2","termid":"PBO:0031896"}


id: GO:0043100
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates pyrimidine nucleobases, 1,3-diazine organic nitrogenous bases, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleobase salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base salvage","type":"exact"}],"termid":"GO:0043100","terms_by_termid":{"GO:0006223":null}}


id: GO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-(1->4)-linked D-xylose backbone decorated with glucuronic acid side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"glucuronoxylan metabolic process","synonyms":[{"name":"glucuronoxylan metabolism","type":"exact"}],"termid":"GO:0010413"}


id: PBO:0079328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 16","termid":"PBO:0079328"}


id: PBO:0050381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 5","termid":"PBO:0050381"}


id: PBO:0003034
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.6.1","termid":"PBO:0003034"}


id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: PBO:0039052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 1","termid":"PBO:0039052"}


id: FYPO:0001021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth during cellular response to osmotic stress","synonyms":[{"name":"normal cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"normal cellular response to osmotic stress","type":"related"},{"name":"normal vegetative cell population growth during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0001021"}


id: MOD:00039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline","definition_xrefs":["PubMed:2400108","PubMed:3734192","RESID:AA0030","ChEBI:18095","PubMed:11292863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-proline","synonyms":[{"name":"(2S,4R)-4-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-hydroxy-L-proline","type":"exact"},{"name":"4-hydroxylated L-proline","type":"exact"},{"name":"4-hydroxyproline","type":"exact"},{"name":"4-trans-hydroxy-L-proline","type":"exact"},{"name":"4HyPro","type":"exact"},{"name":"L-threo-4-hydroxyproline","type":"exact"},{"name":"MOD_RES 4-hydroxyproline","type":"exact"},{"name":"gamma-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00039"}


id: PBO:0041611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary associated calcium binding coiled-coil 1","termid":"PBO:0041611"}


id: PBO:0057644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1236","termid":"PBO:0057644"}


id: PBO:0068760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 5, pseudogene","termid":"PBO:0068760"}


id: GO:1902916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein polyubiquitination.","definition_xrefs":["GO_REF:0000058","GOC:di","PMID:23645667","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"positively_regulates","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein polyubiquitination","synonyms":[{"name":"activation of polyubiquitin","type":"related"},{"name":"activation of protein polyubiquitination","type":"narrow"},{"name":"activation of protein polyubiquitinylation","type":"narrow"},{"name":"activation of protein polyubiquitylation","type":"narrow"},{"name":"positive regulation of polyubiquitin","type":"related"},{"name":"positive regulation of protein polyubiquitinylation","type":"exact"},{"name":"positive regulation of protein polyubiquitylation","type":"exact"},{"name":"up regulation of polyubiquitin","type":"related"},{"name":"up regulation of protein polyubiquitination","type":"exact"},{"name":"up regulation of protein polyubiquitinylation","type":"exact"},{"name":"up regulation of protein polyubiquitylation","type":"exact"},{"name":"up-regulation of polyubiquitin","type":"related"},{"name":"up-regulation of protein polyubiquitination","type":"exact"},{"name":"up-regulation of protein polyubiquitinylation","type":"exact"},{"name":"up-regulation of protein polyubiquitylation","type":"exact"},{"name":"upregulation of polyubiquitin","type":"related"},{"name":"upregulation of protein polyubiquitination","type":"exact"},{"name":"upregulation of protein polyubiquitinylation","type":"exact"},{"name":"upregulation of protein polyubiquitylation","type":"exact"}],"termid":"GO:1902916"}


id: GO:0042647
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a proplastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid nucleoid","termid":"GO:0042646"},{"relation_name":"part_of","term_name":"proplastid stroma","termid":"GO:0009571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proplastid nucleoid","termid":"GO:0042647"}


id: PBO:0071616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 34","termid":"PBO:0071616"}


id: PBO:0003826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6 (predicted)","termid":"PBO:0003826"}


id: PBO:0058254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4632","termid":"PBO:0058254"}


id: SO:1001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is alternatively spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"alternatively_spliced","termid":"SO:0000877"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternatively_spliced_transcript","synonyms":[{"name":"alternatively spliced transcript","type":"exact"}],"termid":"SO:1001187"}


id: PBO:0057233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 412","termid":"PBO:0057233"}


id: GO:0016511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme activity (obsolete GO:0016511)","synonyms":[{"name":"endothelin-converting enzyme activity","type":"exact"}],"termid":"GO:0016511"}


id: PBO:0091872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of chronological lifespan protein Ecl3","termid":"PBO:0091872"}


id: FYPO:0004116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a diameter larger than normal only near the middle of the cell, around the nucleus.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell enlarged around nucleus","synonyms":[{"name":"inviable after spore germination, undivided cell, cell enlarged around nucleus","type":"exact"},{"name":"inviable following spore germination, without cell division, cell enlarged around nucleus","type":"exact"},{"name":"inviable germinated spore, without cell division, cell enlarged around nucleus","type":"exact"},{"name":"lethal after spore germination, without cell division, cell enlarged around nucleus","type":"exact"}],"termid":"FYPO:0004116"}


id: PBO:0028614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ADP_binding","termid":"PBO:0028614"}


id: PBO:0017663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family, Sea2 (predicted)","termid":"PBO:0017663"}


id: PBO:0004019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucan synthase catalytic subunit Bgs1","termid":"PBO:0004019"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: GO:0099703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The induction of synaptic vesicle release by any process that leads to a rise in intracellular calcium ion concentration at the presynapse. This is the first step in synaptic transmission.","definition_xrefs":["ISBN:9780071120005","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic modulation of chemical synaptic transmission","termid":"GO:0099171"},{"relation_name":"is_a","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle exocytosis","termid":"GO:2000302"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration","termid":"GO:0099703"}


id: PBO:0057288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 508","termid":"PBO:0057288"}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["UniProtKB:P87319","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: GO:0050383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uracil + acceptor = barbiturate + reduced acceptor.","definition_xrefs":["RHEA:22752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"uracil dehydrogenase activity","secondary_identifiers":["MetaCyc:URACIL-DEHYDROGENASE-RXN","EC:1.17.99.4"],"termid":"GO:0050383"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: PBO:0063598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 gamma","termid":"PBO:0063598"}


id: GO:0097452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.","definition_xrefs":["GOC:br","PMID:15479637","PMID:23071094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GAIT complex","synonyms":[{"name":"IFN-gamma-activated inhibitor of translation complex","type":"exact"},{"name":"gamma interferon-activated inhibitor of translation complex","type":"exact"}],"termid":"GO:0097452"}


id: PBO:0076885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEX36 antisense RNA 1","termid":"PBO:0076885"}


id: GO:0009141
data:
  {"annotated_genes":["SJAG_03676","SJAG_00461","SJAG_02945","SJAG_02107","SJAG_05204","SJAG_03114","SJAG_03660","SJAG_03828","SJAG_00705","SJAG_03925","SJAG_MIT09","SJAG_00412","SJAG_01471","SJAG_07003","SJAG_02038","SJAG_06621","SJAG_00133","SJAG_00839","SJAG_04422","SJAG_03797","SJAG_00985","SJAG_04627","SJAG_04665","SJAG_04122","SJAG_00915","SJAG_00633","SJAG_05024","SJAG_00438","SJAG_04495","SJAG_02887","SJAG_00685","SJAG_MIT15","SJAG_02135","SJAG_04487","SJAG_02105","SJAG_03373","SJAG_02564","SJAG_00136","SJAG_04657","SJAG_00836","SJAG_03708","SJAG_02796","SJAG_00533","SJAG_04048","SJAG_MIT37","SJAG_00605","SJAG_01298","SJAG_02369","SJAG_04192","SJAG_02009","SJAG_00027","SJAG_04334","SJAG_03852","SJAG_04849","SJAG_02598","SJAG_03903","SJAG_06622","SJAG_05314","SJAG_00885","SJAG_00964","SJAG_00542","SJAG_01310"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70995],"is_not":false,"summary":null,"term":"GO:0009141"},{"annotations":[83579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[93672,94445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[98811,101211,93807,104716,100846,101212,100844,104715,104711,90134,104713,100845,99074,104712,93543,104710,104714,111515,90604,76814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[109183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[110108,88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[113666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[94518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[70964,85118,88071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[78000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[84370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[93727,106838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[74300,97697,95567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[75445,72769],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[67645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[88483,114101,99114,111005,114106,89491,104119,84876,90439,97286,98469,114110,103255,99085,103168,100395,88898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[102621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[102623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[113093],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[95568,71336,71834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic 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triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009141","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009141":null,"GO:0009204":null,"GO:0009212":null,"GO:0009216":null,"GO:0015986":null,"GO:0035863":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046034":null,"GO:0046036":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:1905706":null}}


id: GO:0050694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyllactosamine + 3'-phosphoadenosine 5'-phosphosulfate = 3-sulfo-N-acetyllactosamine + adenosine 3',5'-bisphosphate. N-acetyllactosamine residues are found in a number of different carbohydrate types. N-acetyllactosamine can also be written as Gal-beta-(1,4)-GlcNAc.","definition_xrefs":["PMID:11323440","GOC:ai","PMID:11356829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"galactose 3-O-sulfotransferase activity","synonyms":[{"name":"Gal-3-O-sulfotransferase activity","type":"exact"},{"name":"galactose 3-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0050694"}


id: PBO:0073888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 5","termid":"PBO:0073888"}


id: PBO:0059504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded membrane attachment site","termid":"PBO:0059504"}


id: PATO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000144 solid substance (obsolete PATO:0000144)","termid":"PATO:0000144"}


id: PBO:0077433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167B divergent transcript","termid":"PBO:0077433"}


id: GO:0048745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:lm","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle tissue development","termid":"GO:0048745"}


id: PBO:0064881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2CA divergent transcript","termid":"PBO:0064881"}


id: _global:causally_upstream_of_or_within
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: GO:0034064
data:
  {"annotated_genes":["SJAG_02723","SJAG_04009","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90742,102021,104134],"is_not":false,"summary":null,"term":"GO:0034064"}]},"cv_name":"cellular_component","definition":"A protein complex that contains the transcription factor Ste11 and the RNA binding protein Mei2; involved in regulation of conjugation in fission yeast.","definition_xrefs":["GOC:vw","PMID:17046992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_02723":null,"SJAG_04009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Tor2-Mei2-Ste11 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034064","terms_by_termid":{"GO:0034064":null}}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: PBO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 1","termid":"PBO:0050486"}


id: GO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep.","definition_xrefs":["PMID:11506998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"regulation of REM sleep","type":"exact"}],"termid":"GO:0042320"}


id: FYPO:0006102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"interphase microtubules absent from cell","synonyms":[{"name":"absent interphase microtubules","type":"exact"},{"name":"cytoplasmic microtubules absent from cell during mitotic interphase","type":"exact"},{"name":"interphase cytoplasmic microtubules absent from cell","type":"exact"},{"name":"interphase microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"interphase microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006102"}


id: PBO:0108537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein ortholog","termid":"PBO:0108537"}


id: PBO:0077824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3C","termid":"PBO:0077824"}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["GOC:bf","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: PBO:0053045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4B","termid":"PBO:0053045"}


id: PBO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia","termid":"PBO:0005179"}


id: PR:O74417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC14G10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.04","synonyms":[{"name":"Spom972h-SPCC14G10.04","type":"exact"}],"termid":"PR:O74417"}


id: GO:0034085
data:
  {"annotated_genes":["SJAG_01644"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72044],"is_not":false,"summary":null,"term":"GO:0034085"}]},"cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become associated with each other during S phase.","definition_xrefs":["PMID:14623866","GOC:jh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"establishment of sister chromatid cohesion","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0034085","terms_by_termid":{"GO:0034085":null}}


id: GO:0061063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"positively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode larval development","termid":"GO:0061063"}


id: PATO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue of the bearer's indirect development, undergoing metamorphosis.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Larval"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"larval","termid":"PATO:0001185"}


id: PBO:0078784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 9-1","termid":"PBO:0078784"}


id: MOD:00658
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a methylated arginine, either 5-methylargine, N5-methylarginine, or an omega-N-methylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated arginine","synonyms":[{"name":"MeArg","type":"exact"}],"termid":"MOD:00658"}


id: PBO:0083272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 96% of ORF overlaps the verified gene RPC53; diploid mutant displays a weak budding pattern phenotype in a systematic assay","termid":"PBO:0083272"}


id: PBO:0062747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily J member 2 pseudogene","termid":"PBO:0062747"}


id: PBO:0064503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 2","termid":"PBO:0064503"}


id: PBO:0074573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 29","termid":"PBO:0074573"}


id: PBO:0067361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 460, pseudogene","termid":"PBO:0067361"}


id: PBO:0070992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 16","termid":"PBO:0070992"}


id: PBO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11 (predicted)","termid":"PBO:0001187"}


id: PBO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-6 (pseudogene)","termid":"PBO:0051312"}


id: MOD:01036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01181. Remap to MOD:01181.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01036 O-methyl aspartyl (obsolete MOD:01036)","termid":"MOD:01036"}


id: PBO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 6","termid":"PBO:0072169"}


id: FYPO:0003263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain more than four, and up to eight, spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:vw","PMID:24196444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with more than four spores","synonyms":[{"name":"8-spored asci","type":"related"},{"name":"abnormal ascospore formation resulting in formation of asci with more than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with more than four spores","type":"exact"},{"name":"asci with increased number of spores","type":"exact"},{"name":"eight-spored asci","type":"related"}],"termid":"FYPO:0003263"}


id: GO:0052477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of callose deposition performed by the symbiont as part of its defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont callose deposition (obsolete GO:0052477)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont callose deposition","type":"exact"},{"name":"suppression by organism of defense-related symbiont callose deposition","type":"exact"}],"termid":"GO:0052477"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: PBO:0081832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 766","termid":"PBO:0081832"}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_02416","SJAG_02698","SJAG_02873","SJAG_04257","SJAG_00925","SJAG_00293","SJAG_03006","SJAG_02314","SJAG_00913","SJAG_04038","SJAG_02319","SJAG_03128","SJAG_04670","SJAG_00914","SJAG_04561","SJAG_00320"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85787,86909,88016,89014,90218,91067,98990,104107,104113,106533,108041,108827,109749,111377,112042,113896],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:22922743","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04561":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006351","GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintainance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transciptional elongation-coupled chromatin remodeling","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: PBO:0011486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex16 family peroxisome import protein Pex16 (predicted)","termid":"PBO:0011486"}


id: GO:0016740
data:
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id: PBO:0072419
data:
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id: PBO:0054872
data:
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id: PBO:0085779
data:
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id: PBO:0061722
data:
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id: GO:0060255
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id: PBO:0084755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix iron chaperone; oxidizes and stores iron; interacts with Isu1p to promote Fe-S cluster assembly; mutation results in multiple Fe/S-dependent enzyme deficiencies; human frataxin homolog FXN is mutated in Friedrich's ataxia; human FTL gene can complement yeast yfh1 null mutant","termid":"PBO:0084755"}


id: GO:0071192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv channel interacting protein KChIP1 associated with the channel via interaction with the Kv alpha subunit 4.2.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-KChIP1 channel complex","secondary_identifiers":["CORUM:606"],"termid":"GO:0071192"}


id: GO:0051669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing 2,1- and 2,6-linked beta-D-fructofuranose residues in fructans.","definition_xrefs":["EC:3.2.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fructan beta-fructosidase activity","secondary_identifiers":["MetaCyc:3.2.1.80-RXN"],"synonyms":[{"name":"beta-D-fructan fructohydrolase activity","type":"related"},{"name":"exo-beta-D-fructosidase activity","type":"exact"},{"name":"exo-beta-fructosidase activity","type":"exact"},{"name":"fructan b-fructosidase activity","type":"exact"},{"name":"fructan exohydrolase activity","type":"exact"},{"name":"fructanase activity","type":"related"},{"name":"polysaccharide beta-fructofuranosidase activity","type":"exact"}],"termid":"GO:0051669"}


id: PBO:0055979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 2","termid":"PBO:0055979"}


id: GO:0010239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.","definition_xrefs":["PMID:9648738","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"},{"relation_name":"is_a","term_name":"chloroplast RNA processing","termid":"GO:0031425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"chloroplast mRNA processing","termid":"GO:0010239"}


id: PBO:0048208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit gamma1","termid":"PBO:0048208"}


id: PBO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036129"}


id: GO:0009730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a carbohydrate stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbohydrate stimulus","synonyms":[{"name":"perception of carbohydrate stimulus","type":"related"}],"termid":"GO:0009730"}


id: CHEBI:17634
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-glucose","termid":"CHEBI:17634"}


id: PBO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 3 subfamily A member 137, pseudogene","termid":"PBO:0044428"}


id: PBO:0004470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L18","termid":"PBO:0004470"}


id: PBO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 10","termid":"PBO:0048509"}


id: PBO:0086532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2","termid":"PBO:0086532"}


id: GO:0034042
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91726],"is_not":false,"summary":null,"term":"GO:0034042"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of 5-formyluracil bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar.","definition_xrefs":["GOC:mah","PMID:17641464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","termid":"GO:0000703"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"5-formyluracil DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-foU DNA N-glycosylase activity","type":"exact"}],"termid":"GO:0034042","terms_by_termid":{"GO:0034042":null}}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_04332","SJAG_04280","SJAG_02392","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90149,91431,93970,111168],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: GO:1900044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K63-linked ubiquitination","synonyms":[{"name":"regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900044"}


id: PR:O13900
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap114 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap114 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.09c","synonyms":[{"name":"Spom972h-sap114","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13900"}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: PBO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore","termid":"PBO:0031069"}


id: PBO:0074628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 24","termid":"PBO:0074628"}


id: PR:Q8WZK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.03c gene.","definition_xrefs":["UniProtKB:Q8WZK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.03c","synonyms":[{"name":"Spom972h-SPBC839.03c","type":"exact"}],"termid":"PR:Q8WZK4"}


id: GO:0043362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nucleate erythrocyte to attain its fully functional state. A nucleate erythrocyte is an erythrocyte with a nucleus.","definition_xrefs":["GOC:jl","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"nucleate erythrocyte development","termid":"GO:0048823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte maturation","synonyms":[{"name":"nucleate RBC maturation","type":"exact"},{"name":"nucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043362"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: PBO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_nitrogen_starvation","termid":"PBO:0030707"}


id: GO:0097222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic addition of a sequence of 40-60 adenylyl residues at the 3' end of a eukaryotic mitochondrial mRNA primary transcript. Mitochondria contain both stabilizing and destabilizing poly(A) tails.","definition_xrefs":["PMID:18083837","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial mRNA polyadenylation","termid":"GO:0097222"}


id: PBO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBMPFD","termid":"PBO:0018228"}


id: GO:0046013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell homeostatic proliferation","synonyms":[{"name":"regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046013"}


id: GO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta5 integrin complex bound to fibronectin and secreted frizzled-related protein 2.","definition_xrefs":["PMID:14709558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha5-beta5-fibronectin-SFRP2 complex","synonyms":[{"name":"ITGA5-ITGB5-FN-1-SFRP2 complex","type":"narrow"}],"termid":"GO:0071138"}


id: PBO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33","termid":"PBO:0051153"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: GO:0030274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions.","definition_xrefs":["Pfam:PF00412","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"LIM domain binding","termid":"GO:0030274"}


id: PBO:0055976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 2","termid":"PBO:0055976"}


id: GO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol + NADP+ = all-trans-retinal + NADPH + H+.","definition_xrefs":["RHEA:25033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"NADP-retinol dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2466861","Reactome:R-HSA-5623643","KEGG_REACTION:R08379","Reactome:R-HSA-2465940","Reactome:R-HSA-2465921","Reactome:R-HSA-5419165","Reactome:R-HSA-2471670","Reactome:R-HSA-2464803","Reactome:R-HSA-5615668","Reactome:R-HSA-2464822","Reactome:R-HSA-74872","EC:1.1.1.300","MetaCyc:RXN-10841"],"synonyms":[{"name":"NADP(H)-dependent retinol dehydrogenase/reductase activity","type":"related"},{"name":"all-trans retinal reductase activity","type":"broad"},{"name":"all-trans-retinol dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase [NADP+] activity","type":"related"},{"name":"retinol dehydrogenase activity","type":"broad"},{"name":"retinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052650"}


id: GO:0051926
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86886,108586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"negatively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium ion transport","type":"exact"},{"name":"down-regulation of calcium ion transport","type":"exact"},{"name":"downregulation of calcium ion transport","type":"exact"},{"name":"inhibition of calcium ion transport","type":"narrow"},{"name":"negative regulation of calcium transport","type":"exact"}],"termid":"GO:0051926","terms_by_termid":{"GO:1905949":null}}


id: GO:0009161
data:
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id: PBO:0052818
data:
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id: PR:P87234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.09c","synonyms":[{"name":"Spom972h-gyp3","type":"exact"}],"termid":"PR:P87234"}


id: GO:0020031
data:
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id: PBO:0084213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric protein that is packaged into COPII vesicles; cycles between the ER and Golgi; involved in secretory transport but not directly required for aspects of transport assayed in vitro; may influence membrane composition","termid":"PBO:0084213"}


