# terms

id: GO:0038115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL19 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 7 signaling pathway","type":"related"},{"name":"CCL19-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 19 signalling pathway","type":"exact"}],"termid":"GO:0038115"}


id: PBO:0028910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_organization_during_vegetative_growth","termid":"PBO:0028910"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["GOC:cab1","WB_REF:cgc467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase, decarboxylating","termid":"PBO:0003092"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: FYPO:0004486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein deacetylation during vegetative growth","synonyms":[{"name":"abolished protein deacetylation during mitotic cell cycle","type":"related"},{"name":"protein deacetylation abolished during vegetative growth","type":"exact"},{"name":"protein deacetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004486"}


id: GO:0060447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a region of the lung epithelium initiates an outgrowth.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"part_of","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud outgrowth involved in lung branching","synonyms":[{"name":"bud formation involved in lung branching","type":"exact"}],"termid":"GO:0060447"}


id: PBO:0069170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 422, pseudogene","termid":"PBO:0069170"}


id: PBO:0038339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_added","termid":"PBO:0038339"}


id: GO:0100025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100025)","termid":"GO:0100025"}


id: PBO:0084078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein that couples the Ski complex and exosome; putative pseudo-translational GTPase involved in 3'-to-5' mRNA decay pathway; interacts with both the cytoplasmic exosome and the Ski complex; eRF3-like domain targets nonstop mRNA for degradation; null mutants have a superkiller phenotype; SKI7 has a paralog, HBS1, that arose from the whole genome duplication","termid":"PBO:0084078"}


id: GO:0031040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle of ciliated protozoan cells that contains a diploid copy of the cell's complete genome. Sections of contiguous sequence in the macronucleus are often interrupted by internal eliminated sequences (IES), and may be permuted, in micronuclei. Genic transcription is not found in micronuclei. Some ciliate species may contain multiple micronuclei per cell.","definition_xrefs":["GOC:ns"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"micronucleus","secondary_identifiers":["Wikipedia:Micronucleus"],"termid":"GO:0031040"}


id: GO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter, and located in chloroplasts. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch grain","termid":"GO:0043036"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast starch grain","synonyms":[{"name":"chloroplast starch granule","type":"exact"}],"termid":"GO:0009569"}


id: PBO:0071017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 19","termid":"PBO:0071017"}


id: PBO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase Sir1","termid":"PBO:0000836"}


id: GO:0022009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system vasculogenesis","termid":"GO:0022009"}


id: PBO:0046119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 2 pseudogene 3","termid":"PBO:0046119"}


id: GO:1990235
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of diamine N-acetyltransferase activity.","definition_xrefs":["GOC:bhm","PMID:8077207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"diamine N-acetyltransferase complex","synonyms":[{"name":"SAT complex","type":"narrow"},{"name":"SAT tetramer","type":"narrow"},{"name":"spermidine acetyltransferase complex","type":"narrow"}],"termid":"GO:1990235"}


id: PBO:0108689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex RabGEF subunit Bet5","termid":"PBO:0108689"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:fj","PMID:8405712","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of signal transduction in another organism","termid":"GO:0044509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of signal transduction in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: PBO:0109391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 20","termid":"PBO:0109391"}


id: GO:0060121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of vestibular hair cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"},{"relation_name":"part_of","term_name":"vestibular receptor cell morphogenesis","termid":"GO:0060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell stereocilium organization","synonyms":[{"name":"vestibular hair cell stereocilium organization","type":"exact"},{"name":"vestibular receptor cell stereocilium organisation","type":"exact"},{"name":"vestibular receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060121"}


id: PBO:0076960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3","termid":"PBO:0076960"}


id: PBO:0108524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPRP N-terminal and LCE C-terminal like protein","termid":"PBO:0108524"}


id: PBO:0066584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOA intronic transcript 1","termid":"PBO:0066584"}


id: GO:0008240
data:
  {"annotated_genes":["SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73636],"is_not":false,"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of an N-terminal tripeptide from a polypeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"tripeptidyl-peptidase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:3.4.14.9","MetaCyc:3.4.14.10-RXN","MetaCyc:3.4.14.9-RXN","EC:3.4.14.10"],"termid":"GO:0008240","terms_by_termid":{"GO:0008240":null}}


id: GO:0010471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-galactose + alpha-D-mannose 1-phosphate = GDP-alpha-D-mannose + beta-L-galactose-1-phosphate.","definition_xrefs":["RHEA:65708","PMID:17485667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"GDP-galactose:mannose-1-phosphate guanylyltransferase activity","secondary_identifiers":["MetaCyc:RXN4FS-12","EC:2.7.7.69"],"synonyms":[{"name":"GDP-L-galactose phosphorylase activity","type":"broad"},{"name":"GDP-L-galactose:mannose-1-phosphate guanylyltransferase activity","type":"exact"}],"termid":"GO:0010471"}


id: RO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receives_input_from","termid":"RO:0002485"}


id: GO:0072584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that begins when material is taken up into plasma membrane caveolae, which then pinch off to form endocytic caveolar carriers.","definition_xrefs":["PMID:17318224","PMID:8970738","GOC:BHF","GOC:mah","PMID:18498251","PMID:9234965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"caveolin-mediated endocytosis","synonyms":[{"name":"caveolae-dependent endocytosis","type":"exact"},{"name":"caveolae-mediated endocytosis","type":"exact"},{"name":"caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:0072584"}


id: GO:1901540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"ent-pimara-8(14),15-diene metabolic process","termid":"GO:1901539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene catabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene breakdown","type":"exact"},{"name":"ent-pimara-8(14),15-diene catabolism","type":"exact"},{"name":"ent-pimara-8(14),15-diene degradation","type":"exact"}],"termid":"GO:1901540"}


id: FYPO:0006799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nuclear MIS12/MIND complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:29180432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"abolished nuclear MIS12/MIND complex binding","synonyms":[{"name":"abolished nuclear MIS12/MIND complex binding during mitotic cell cycle","type":"related"},{"name":"abolished nuclear MIS12/MIND complex binding during vegetative growth","type":"exact"},{"name":"nuclear MIS12/MIND complex binding abolished","type":"exact"}],"termid":"FYPO:0006799"}


id: FYPO:0004256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a single cell is viable, and grows in the form of a lemon. A lemon shape is defined mathematically as having a quadric surface in three dimensions obtained by rotating less than half of a circular arc about an axis passing through the endpoints of the arc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"lemon-shaped cell","termid":"FYPO:0000224"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"viable lemon-shaped cell","synonyms":[{"name":"viable lemon-shaped cell during mitotic cell cycle","type":"related"},{"name":"viable lemon-shaped cell during vegetative growth","type":"exact"},{"name":"viable lemon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0004256"}


id: GO:0090236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in somitogenesis (obsolete GO:0090236)","termid":"GO:0090236"}


id: GO:0018063
data:
  {"annotated_genes":["SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90049,102835],"is_not":false,"summary":null,"term":"GO:0018063"}]},"cv_name":"biological_process","definition":"The linkage of cytochromes and other heme proteins to heme.","definition_xrefs":["RESID:AA0134","RESID:AA0135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"cytochrome c-heme linkage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c-haem linkage","type":"exact"}],"termid":"GO:0018063","terms_by_termid":{"GO:0018063":null}}


id: FYPO:0004467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0004467"}


id: PBO:0047271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member C","termid":"PBO:0047271"}


id: PBO:0028681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_attachment_of_spindle_microtubules_to_kinetochore","termid":"PBO:0028681"}


id: GO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to an oxygen atom on an alcohol acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"alcohol O-acyltransferase activity","synonyms":[{"name":"AEATase activity","type":"narrow"},{"name":"acyl-CoA:alcohol O-acyltransferase activity","type":"exact"},{"name":"acyl-CoA:ethanol O-acyltransferase","type":"narrow"},{"name":"acyl-coenzymeA:alcohol O-acyltransferase activity","type":"exact"},{"name":"acyl-coenzymeA:ethanol O-acyltransferase activity","type":"narrow"},{"name":"alcohol acyltransferase activity","type":"exact"}],"termid":"GO:0034318"}


id: PBO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains pseudogene 1","termid":"PBO:0052406"}


id: PBO:0060419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase 2","termid":"PBO:0060419"}


id: FYPO:0007542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of double-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal double-stranded DNA binding","synonyms":[{"name":"normal dsDNA binding","type":"exact"}],"termid":"FYPO:0007542"}


id: PBO:0041234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 68","termid":"PBO:0041234"}


id: FYPO:0001655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of histidine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal histidine import","synonyms":[{"name":"abnormal L-histidine import","type":"exact"},{"name":"abnormal L-histidine import across plasma membrane","type":"exact"},{"name":"abnormal histidine import during mitotic cell cycle","type":"related"},{"name":"abnormal histidine import during vegetative growth","type":"exact"},{"name":"abnormal histidine import into cell","type":"exact"},{"name":"abnormal histidine uptake","type":"exact"}],"termid":"FYPO:0001655"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: GO:1905337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aggrephagy.","definition_xrefs":["PMID:25686248","GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"positively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of aggrephagy","synonyms":[{"name":"activation of aggrephagy","type":"narrow"},{"name":"up regulation of aggrephagy","type":"exact"},{"name":"up-regulation of aggrephagy","type":"exact"},{"name":"upregulation of aggrephagy","type":"exact"}],"termid":"GO:1905337"}


id: PBO:0048161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 6","termid":"PBO:0048161"}


id: FYPO:0002140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular pigment accumulation is increased during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular pigment accumulation","termid":"FYPO:0000741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular pigment accumulation during cellular response to caffeine","synonyms":[{"name":"abnormal cellular pigment accumulation during cellular response to caffeine","type":"exact"},{"name":"altered colony color during cellular response to caffeine","type":"related"},{"name":"altered colony colour during cellular response to caffeine","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"increased cellular pigment accumulation during cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0002140"}


id: GO:2000053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"Wnt signaling pathway involved in dorsal/ventral axis specification","termid":"GO:0044332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway involved in dorsal/ventral axis specification","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000053"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: PBO:0017587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transmembrane transporter","termid":"PBO:0017587"}


id: GO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the physical movement of a new cis-Golgi stack from the cis-position, nearest the endoplasmic reticulum (ER), to the trans position, farthest from the ER, successively becoming first a medial-Golgi cisterna and then a trans-Golgi cisterna.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"cisternal progression","synonyms":[{"name":"cisternal maturation","type":"exact"}],"termid":"GO:0045057"}


id: GO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.","definition_xrefs":["RESID:AA0108"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(L-isoglutamyl)-L-cysteine (obsolete GO:0018232)","termid":"GO:0018232"}


id: GO:0045619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte differentiation","synonyms":[{"name":"regulation of lymphocyte development","type":"related"}],"termid":"GO:0045619"}


id: PBO:0056228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member H1","termid":"PBO:0056228"}


id: GO:0051523
data:
  {"annotated_genes":["SJAG_01456","SJAG_02838","SJAG_03486","SJAG_04724","SJAG_03705","SJAG_04322","SJAG_00216"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83838,95232,98914,102224,106042,111637,112995],"is_not":false,"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"The process in which a cell switches from monopolar cell growth to bipolar cell growth.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, monopolar to bipolar","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NETO","type":"narrow"},{"name":"new end take off","type":"narrow"}],"termid":"GO:0051523","terms_by_termid":{"GO:0051523":null}}


id: GO:0035669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor 4 where the TRAM adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["GOC:BHF","PMID:14556004","PMID:18297073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRAM-dependent toll-like receptor signaling pathway","termid":"GO:0035668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAM-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRAM-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRAM-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035669"}


id: GO:0106247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of poly(A)-specific ribonuclease activity.","definition_xrefs":["PMID:29932902","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106246"},{"relation_name":"is_a","term_name":"negative regulation of exoribonuclease activity","termid":"GO:1901918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of poly(A)-specific ribonuclease activity","termid":"GO:0106247"}


id: GO:0030030
data:
  {"annotated_genes":["SJAG_02989","SJAG_04509","SJAG_01794","SJAG_02864","SJAG_00514","SJAG_02379","SJAG_01894","SJAG_01943","SJAG_01993","SJAG_02700","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93828,94508,94429,84033,88141,109534],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[89105,83684,106625,85589,86534],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection organisation","type":"exact"},{"name":"cell projection organization and biogenesis","type":"related"},{"name":"cell surface structure organization and biogenesis","type":"related"}],"termid":"GO:0030030","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: GO:0005946
data:
  {"annotated_genes":["SJAG_01427","SJAG_00129","SJAG_01531","SJAG_01862","SJAG_01646","SJAG_04859","SJAG_00182"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73588,74011,75261,77773,78043,78493,106769],"is_not":false,"summary":null,"term":"GO:0005946"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses alpha,alpha-trehalose-phosphate synthase (UDP-forming) and trehalose-phosphatase activities, and thus catalyzes two reactions in trehalose biosynthesis. In the complex identified in Saccharomyces, Tps1p has alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity, Tps2p has trehalose 6-phosphate phosphatase activity; Tps3p is a regulatory subunit, and an additional subunit, Tsl1p, may be present.","definition_xrefs":["PMID:9837904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"UDP-glucose-glucosephosphate glucosyltransferase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase complex","type":"exact"},{"name":"trehalose-6-phosphate synthase/phosphatase","type":"exact"}],"termid":"GO:0005946","terms_by_termid":{"GO:0005946":null}}


id: PBO:0031267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_autophagy","termid":"PBO:0031267"}


id: PBO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REplication","termid":"PBO:0011076"}


id: PBO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.-","termid":"PBO:0000784"}


id: PBO:0082807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of UDP-GlcNAc transferase; required for second step of dolichyl-linked oligosaccharide synthesis; anchors catalytic subunit Alg13p to ER membrane; similar to bacterial and human glycosyltransferases; both human homologs ALG13 and ALG14 are required to complement yeast alg14 mutant; mutations of human ALG14 cause congenital myasthenic syndrome","termid":"PBO:0082807"}


id: GO:0002049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"pyoverdine biosynthetic process","termid":"GO:0002049"}


id: GO:0050674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of urothelial cells, resulting in the expansion of a cell population. Urothelial cells make up a layer of transitional epithelium in the wall of the bladder, ureter, and renal pelvis, external to the lamina propria.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urothelial cell proliferation","termid":"GO:0050674"}


id: PBO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degradation is independent of association with Pcu4-DDb1-CSN complex","termid":"PBO:0001303"}


id: GO:0008711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-L-glycero-D-manno-heptose synthase activity (obsolete GO:0008711)","synonyms":[{"name":"ADP-L-glycero-D-manno-heptose synthase activity","type":"exact"}],"termid":"GO:0008711"}


id: PBO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase like 1","termid":"PBO:0080093"}


id: GO:0008048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of guanylate cyclase in response to a change in calcium ion concentration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylate cyclase activator activity","termid":"GO:0030250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"calcium sensitive guanylate cyclase activator activity","termid":"GO:0008048"}


id: GO:0045111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intermediate filament cytoskeleton","termid":"GO:0045111"}


id: GO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.","definition_xrefs":["GOC:jid","GOC:sr","FMA:9907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parasympathetic nervous system development","termid":"GO:0048486"}


id: FYPO:0001180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0001180)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001180"}


id: PBO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A3","termid":"PBO:0045175"}


id: GO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the response to osmotic stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to osmotic stress","termid":"GO:0047484"}


id: GO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2, as carried out by individual cells.","definition_xrefs":["Wikipedia:Alkyne","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular alkyne metabolic process","synonyms":[{"name":"alkyne metabolism","type":"exact"}],"termid":"GO:0043452"}


id: PBO:0089337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi to ER retrograde transport protein","termid":"PBO:0089337"}


id: GO:1904582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:21471000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of intracellular mRNA localization","termid":"GO:1904580"},{"relation_name":"positively_regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intracellular mRNA localization","synonyms":[{"name":"activation of establishment and maintenance of intracellular RNA localization","type":"narrow"},{"name":"activation of intracellular mRNA localisation","type":"narrow"},{"name":"activation of intracellular mRNA localization","type":"narrow"},{"name":"activation of intracellular mRNA positioning","type":"narrow"},{"name":"activation of mRNA localization, intracellular","type":"narrow"},{"name":"activation of mRNA positioning, intracellular","type":"narrow"},{"name":"positive regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"positive regulation of intracellular mRNA localisation","type":"exact"},{"name":"positive regulation of intracellular mRNA positioning","type":"narrow"},{"name":"positive regulation of mRNA localization, intracellular","type":"exact"},{"name":"positive regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"up regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"up regulation of intracellular mRNA localisation","type":"exact"},{"name":"up regulation of intracellular mRNA localization","type":"exact"},{"name":"up regulation of intracellular mRNA positioning","type":"narrow"},{"name":"up regulation of mRNA localization, intracellular","type":"exact"},{"name":"up regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"up-regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"up-regulation of intracellular mRNA localisation","type":"exact"},{"name":"up-regulation of intracellular mRNA localization","type":"exact"},{"name":"up-regulation of intracellular mRNA positioning","type":"narrow"},{"name":"up-regulation of mRNA localization, intracellular","type":"exact"},{"name":"up-regulation of mRNA positioning, intracellular","type":"narrow"},{"name":"upregulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"upregulation of intracellular mRNA localisation","type":"exact"},{"name":"upregulation of intracellular mRNA localization","type":"exact"},{"name":"upregulation of intracellular mRNA positioning","type":"narrow"},{"name":"upregulation of mRNA localization, intracellular","type":"exact"},{"name":"upregulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904582"}


id: PBO:0087366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; septin protein involved in sporulation; regulated by ABFI; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087366"}


id: GO:0050790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an enzyme.","definition_xrefs":["GOC:vw","GOC:ebc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catalytic activity","secondary_identifiers":["GO:0048552"],"synonyms":[{"name":"regulation of enzyme activity","type":"exact"},{"name":"regulation of metalloenzyme activity","type":"narrow"}],"termid":"GO:0050790"}


id: GO:1905866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Atg1/ULK1 kinase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:mf","PMID:26567215","GOC:autophagy","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of Atg1/ULK1 kinase complex assembly","termid":"GO:1905864"},{"relation_name":"positively_regulates","term_name":"Atg1/ULK1 kinase complex assembly","termid":"GO:1904745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of Atg1/ULK1 kinase complex assembly","synonyms":[{"name":"activation of ATG1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1-ATG13 complex assembly","type":"narrow"},{"name":"activation of ATG1-ATG13 complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 kinase complex formation","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ATG1/ULK1 signaling complex formation","type":"narrow"},{"name":"activation of Atg1p signalling complex assembly","type":"narrow"},{"name":"activation of Atg1p signalling complex formation","type":"narrow"},{"name":"activation of ULK1 signaling complex assembly","type":"narrow"},{"name":"activation of ULK1 signaling complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-FIP200 complex formation","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex assembly","type":"narrow"},{"name":"activation of ULK1-ATG13-RB1CC1 complex formation","type":"narrow"},{"name":"positive regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"positive regulation of ATG1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"positive regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"positive regulation of Atg1p signalling complex formation","type":"exact"},{"name":"positive regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"positive regulation of ULK1 signaling complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"positive regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"up-regulation of ATG1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"up-regulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of Atg1p signalling complex assembly","type":"exact"},{"name":"up-regulation of Atg1p signalling complex formation","type":"exact"},{"name":"up-regulation of ULK1 signaling complex assembly","type":"exact"},{"name":"up-regulation of ULK1 signaling complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"up-regulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"},{"name":"upregulation of ATG1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex assembly","type":"exact"},{"name":"upregulation of ATG1-ATG13 complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 kinase complex formation","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ATG1/ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of Atg1p signalling complex assembly","type":"exact"},{"name":"upregulation of Atg1p signalling complex formation","type":"exact"},{"name":"upregulation of ULK1 signaling complex assembly","type":"exact"},{"name":"upregulation of ULK1 signaling complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-FIP200 complex formation","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex assembly","type":"exact"},{"name":"upregulation of ULK1-ATG13-RB1CC1 complex formation","type":"exact"}],"termid":"GO:1905866"}


id: GO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene + H+ + 2 e- = Cl- + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene is also known as DDE; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,1-dichloro-2,2-bis(4-chlorophenyl)ethene dehalogenase activity","secondary_identifiers":["EC:1.97.1.-"],"synonyms":[{"name":"1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene dehalogenase activity","type":"exact"},{"name":"DDE dehalogenase activity","type":"exact"}],"termid":"GO:0018702"}


id: GO:0101031
data:
  {"annotated_genes":["SJAG_00447","SJAG_04121","SJAG_03570","SJAG_02378","SJAG_02926","SJAG_01002","SJAG_00609","SJAG_03320"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70111,72520,75385,75812,77237,73390,76922,78403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005832"}]},"cv_name":"cellular_component","definition":"A protein complex required for the non-covalent folding or unfolding, maturation, stabilization or assembly or disassembly of macromolecular structures. Usually active during or immediately after completion of translation. Many chaperone complexes contain heat shock proteins.","definition_xrefs":["PMID:21855797","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00609":null,"SJAG_01002":null,"SJAG_02378":null,"SJAG_02926":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04121":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein folding chaperone complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"chaperone complex","type":"broad"}],"termid":"GO:0101031","terms_by_termid":{"GO:0005832":null}}


id: PR:Q9P7K9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate semialdehyde dehydrogenase [NAD(P)+] Sad that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase-like protein C21C3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.15c","secondary_identifiers":["UniProtKB:Q9P7K9"],"synonyms":[{"name":"Spom972h-sad","type":"exact"}],"termid":"PR:Q9P7K9"}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: PBO:0038726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 21","termid":"PBO:0038726"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: PBO:0063686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen B, pseudogene","termid":"PBO:0063686"}


id: GO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of aecium development, a process in which a cuplike structure containing chains of aeciospores is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of aecium development","termid":"GO:0075268"},{"relation_name":"positively_regulates","term_name":"aecium development","termid":"GO:0075267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aecium development","termid":"GO:0075269"}


id: PBO:0089479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor complex subunit Iws1","termid":"PBO:0089479"}


id: PBO:0081780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 707","termid":"PBO:0081780"}


id: GO:0043403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of skeletal muscle tissue to repair injured or damaged muscle fibers in the postnatal stage.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","PMID:16607119","PMID:12021255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue regeneration","synonyms":[{"name":"myofiber turnover","type":"related"}],"termid":"GO:0043403"}


id: GO:0099513
data:
  {"annotated_genes":["SJAG_02336","SJAG_01613","SJAG_01196","SJAG_00030","SJAG_04841","SJAG_03145","SJAG_01215","SJAG_01330","SJAG_01993","SJAG_00113","SJAG_04003","SJAG_01224","SJAG_00930","SJAG_00773","SJAG_02509","SJAG_00723","SJAG_00851","SJAG_02040","SJAG_04387","SJAG_01297","SJAG_00845","SJAG_05266","SJAG_02286","SJAG_02045","SJAG_04887","SJAG_00140","SJAG_02624","SJAG_03052","SJAG_00332","SJAG_00918","SJAG_02695","SJAG_01775","SJAG_01546","SJAG_05220","SJAG_00655","SJAG_03088","SJAG_03264","SJAG_03073","SJAG_04745","SJAG_03540","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71588,90865,75042,104377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[94725,107376,102778,99442,102573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[87036,96902,99315,103579,94726,94144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[90786,93118,99173],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[113209,86819,107989,75690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[113710,99317,109250,92533,95859,85348,97775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[83546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[77780,92331,114375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[94731,95862],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[100060,78613,114494,94733,87039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[87040,73505,103585,77677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[92536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[102856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[113716,95864,101693,96907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[113214,94736,102857,94148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[87043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[96910,90368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[96911,92537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[87045],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[85467,92841,74948,99129,96001,109309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polymeric cytoskeletal fiber","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:21873635":null,"PMID:30726171":null},"termid":"GO:0099513","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: PBO:0049595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 13","termid":"PBO:0049595"}


id: PBO:0042565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN1A antisense RNA 1","termid":"PBO:0042565"}


id: FYPO:0005853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which filamentous actin (F-actin) is present in the cytoplasm in the form of dense, irregularly shaped aggregates.","definition_xrefs":["PomBase:mah","PMID:12764130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"aggregated filamentous actin in cytoplasm","synonyms":[{"name":"F-actin accumulation in cytoplasm","type":"related"},{"name":"aggregated F- actin in cytoplasm","type":"exact"},{"name":"aggregated cytoplasmic F-actin","type":"exact"},{"name":"aggregated cytoplasmic filamentous actin","type":"exact"},{"name":"aggregated filamentous actin in cytoplasm during mitotic cell cycle","type":"related"},{"name":"aggregated filamentous actin in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0005853"}


id: FYPO:0004354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic G1 phase","synonyms":[{"name":"increased protein phosphorylation during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic G1-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004354"}


id: FYPO:0000876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000876"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["GOC:bf","PMID:12130631","PMID:12130651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: GO:0034948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,6-dihydroxypseudooxynicotine + H2O = 2,6-dihydroxypyridine + 4-methylaminobutyrate.","definition_xrefs":["UM-BBD_reactionID:r0482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,6-dihydroxypseudooxynicotine hydrolase activity","secondary_identifiers":["EC:3.7.1.-"],"termid":"GO:0034948"}


id: PATO:0001344
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. cerevisiae mating type cells that secrete a pheromone that stimulates a haploids.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Saccharomyces cerevisiae mating type","termid":"PATO:0001342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha mating type (yeast)","synonyms":[{"name":"alpha","type":"broad"}],"termid":"PATO:0001344"}


id: FYPO:0001794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to purvalanol A","synonyms":[{"name":"normal RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"normal transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001794"}


id: GO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming distinct miRNA isoforms from a mature miRNA that differ at their 3'-ends.","definition_xrefs":["PMID:22055292","PMID:22055293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA processing","termid":"GO:0031054"},{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"},{"relation_name":"part_of","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA 3'-end processing","synonyms":[{"name":"mature miRNA 3'-end processing","type":"related"},{"name":"miRNA 3' end terminal trimming","type":"broad"},{"name":"miRNA 3'-end processing","type":"broad"},{"name":"miRNA trimming","type":"broad"}],"termid":"GO:0044747"}


id: FYPO:0003686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of a box C/D snoRNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abnormal box C/D snoRNA 3'-end processing","synonyms":[{"name":"abnormal box C/D snoRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal box C/D snoRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003686"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: PBO:0090279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B alpha subunit Gcn3","termid":"PBO:0090279"}


id: PBO:0040241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 2A","termid":"PBO:0040241"}


id: GO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids in the protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein oxidation","termid":"GO:0018158"},{"relation_name":"is_a","term_name":"lipoprotein oxidation","termid":"GO:0042161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein amino acid oxidation","termid":"GO:0034438"}


id: PATO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter U.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U-shaped","synonyms":[{"name":"horseshoe","type":"narrow"},{"name":"horseshoe shaped","type":"exact"}],"termid":"PATO:0001879"}


id: PBO:0064469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 3","termid":"PBO:0064469"}


id: GO:2000877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"negatively_regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of oligopeptide transport","termid":"GO:2000877"}


id: PBO:0077973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 1-1","termid":"PBO:0077973"}


id: GO:0097468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to reactive oxygen species","synonyms":[{"name":"PCD in response to oxidative stress","type":"broad"},{"name":"PCD in response to reactive oxygen species","type":"exact"},{"name":"programmed cell death in response to oxidative stress","type":"broad"},{"name":"reactive oxygen species-mediated PCD","type":"exact"},{"name":"reactive oxygen species-mediated programmed cell death","type":"exact"}],"termid":"GO:0097468"}


id: PR:Q10177
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A divalent metal cation transporter MntH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01796","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese transporter pdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.08","secondary_identifiers":["UniProtKB:Q10177"],"synonyms":[{"name":"Spom972h-mntH","type":"exact"}],"termid":"PR:Q10177"}


id: GO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+.","definition_xrefs":["EC:1.3.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"precorrin-6A reductase activity","secondary_identifiers":["RHEA:23408","MetaCyc:1.3.1.54-RXN"],"synonyms":[{"name":"precorrin-6B:NADP+ oxidoreductase activity","type":"related"},{"name":"precorrin-6X reductase activity","type":"exact"},{"name":"precorrin-6Y:NADP(+) oxidoreductase activity","type":"related"},{"name":"precorrin-6Y:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0016994"}


id: GO:0052661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-propane-1,2-diol + NAD+ = (S)-lactaldehyde + NADH + H+.","definition_xrefs":["RHEA:15933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactaldehyde reductase activity","termid":"GO:0008912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-lactaldehyde reductase activity","secondary_identifiers":["MetaCyc:LACTALDREDUCT-RXN","KEGG_REACTION:R02258"],"synonyms":[{"name":"(S)-propane-1,2-diol:NAD+ oxidoreductase activity","type":"related"},{"name":"L-lactaldehyde:propanediol oxidoreductase activity","type":"related"}],"termid":"GO:0052661"}


id: PR:Q10070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.04c","synonyms":[{"name":"Spom972h-mdm31","type":"exact"}],"termid":"PR:Q10070"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["PMID:25677106","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: PBO:0074187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 8","termid":"PBO:0074187"}


id: PR:O94444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01888","PANTHER:PTHR10223:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.10c","secondary_identifiers":["UniProtKB:O94444"],"synonyms":[{"name":"Spom972h-PSMD4","type":"exact"}],"termid":"PR:O94444"}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: GO:0060753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell chemotaxis","termid":"GO:0060753"}


id: PBO:0075006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-17","termid":"PBO:0075006"}


id: PBO:0065000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM6 antisense RNA 1","termid":"PBO:0065000"}


id: PBO:0058867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9900","termid":"PBO:0058867"}


id: PBO:0056698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 1","termid":"PBO:0056698"}


id: PBO:0065593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 9","termid":"PBO:0065593"}


id: GO:0008523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate.","definition_xrefs":["TC:2.A.21.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium-dependent multivitamin transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-199219","Reactome:R-HSA-199206","Reactome:R-HSA-429581"],"termid":"GO:0008523"}


id: PBO:0062924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y11","termid":"PBO:0062924"}


id: PBO:0064602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 3","termid":"PBO:0064602"}


id: PBO:0057645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1237","termid":"PBO:0057645"}


id: PBO:0108612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F2, pseudogene","termid":"PBO:0108612"}


id: GO:0035286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Division of a leg into a series of semi-repetitive parts or segments. Most arthropod appendages are visibly segmented; the Drosophila leg for example has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["PMID:10357895"],"gene_count":0,"genotype_count":0,"name":"obsolete leg segmentation (obsolete GO:0035286)","synonyms":[{"name":"leg segmentation","type":"exact"}],"termid":"GO:0035286"}


id: PBO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 24","termid":"PBO:0050168"}


id: PBO:0072344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 30","termid":"PBO:0072344"}


id: GO:0051482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium ions in the cytosol that occurs as part of a PLC-activating G protein-coupled receptor signaling pathway. G-protein-activated PLC hydrolyses phosphatidylinositol-bisphosphate (PIP2) to release diacylglycerol (DAG) and inositol trisphosphate (IP3). IP3 then binds to calcium release channels in the endoplasmic reticulum (ER) to trigger calcium ion release into the cytosol.","definition_xrefs":["GOC:signaling","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway (obsolete GO:0051482)","synonyms":[{"name":"elevation of calcium ion concentration in cytoplasm during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of calcium ion concentration in cytosol during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytoplasmic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"broad"},{"name":"elevation of cytosolic calcium ion concentration during G-protein signalling, coupled to IP3 second messenger (phospholipase C activating)","type":"related"},{"name":"elevation of cytosolic calcium ion concentration involved in G-protein signaling coupled to IP3 second messenger","type":"exact"},{"name":"elevation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"},{"name":"positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway","type":"exact"}],"termid":"GO:0051482"}


id: PR:Q9UTM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTM1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C144.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.01","synonyms":[{"name":"Spom972h-SPAC144.01","type":"exact"}],"termid":"PR:Q9UTM1"}


id: GO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of epinephrine uptake","termid":"GO:0051627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of epinephrine uptake","synonyms":[{"name":"inhibition of adrenaline uptake","type":"exact"},{"name":"inhibition of epinephrine import","type":"exact"}],"termid":"GO:0051629"}


id: FYPO:0009069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ciclopirox olamine. Cells stop growing (and may die) at a concentration of ciclopirox olamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ciclopirox olamine","synonyms":[{"name":"hypersensitive to ciclopirox olamine","type":"exact"},{"name":"sensitive to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"sensitive to ciclopirox olamine during vegetative growth","type":"exact"}],"termid":"FYPO:0009069"}


id: PBO:0086944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for a factor pheromone; couples to MAP kinase cascade to mediate pheromone response; transcribed in alpha cells and required for mating by alpha cells, ligand bound receptors endocytosed and recycled to the plasma membrane; GPCR","termid":"PBO:0086944"}


id: PATO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductivity","termid":"PATO:0001585"}


id: PBO:0078139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 18","termid":"PBO:0078139"}


id: PBO:0040513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin receptor 2","termid":"PBO:0040513"}


id: GO:1905059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:TermGenie","PMID:20678993","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarco(endo)plasmic reticulum Ca2+-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarcoplasmic reticulum ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905059"}


id: PBO:0078907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 16-1","termid":"PBO:0078907"}


id: PBO:0048855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A2","termid":"PBO:0048855"}


id: GO:0006848
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76172,90004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The directed movement of pyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyruvate transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0006848","terms_by_termid":{"GO:0006850":null}}


id: PBO:0083891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport; regulates ADP release from the ATP-dependent RNA helicase Dbp5p; forms a stable association with Nup82p, Gle2p and two other FG-nucleoporins (Nsp1p and Nup116p)","termid":"PBO:0083891"}


id: GO:0033506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosinolates from other compounds including homomethionine.","definition_xrefs":["MetaCyc:PWY-1187","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006790"],"is_obsolete":false,"name":"glucosinolate biosynthetic process from homomethionine","synonyms":[{"name":"glucosinolate anabolism from homomethionine","type":"exact"},{"name":"glucosinolate biosynthesis from homomethionine","type":"exact"},{"name":"glucosinolate formation from homomethionine","type":"exact"},{"name":"glucosinolate synthesis from homomethionine","type":"exact"}],"termid":"GO:0033506"}


id: PBO:0087531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; protein abundance increases in response to DNA replication stress","termid":"PBO:0087531"}


id: PBO:0051014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 1","termid":"PBO:0051014"}


id: RO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_preceded_by","termid":"RO:0002087"}


id: FYPO:0001494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000005","FYPO:0000004","FYPO:0000032"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell","synonyms":[{"name":"elongated inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"elongated multiseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001494"}


id: GO:0006896
data:
  {"annotated_genes":["SJAG_02912","SJAG_04023","SJAG_04902","SJAG_01488","SJAG_01809","SJAG_03963","SJAG_02811","SJAG_00916","SJAG_03137","SJAG_01324","SJAG_03726","SJAG_03347","SJAG_02453","SJAG_03848","SJAG_00108","SJAG_04931","SJAG_02587","SJAG_03072","SJAG_02240","SJAG_03756","SJAG_01645"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70164,73422,75424,76553,76718,76757,76979,78359,86280,89800,91713,92442,92712,95015,95406,96933,104013,104128,105558,106760,112656],"is_not":false,"summary":null,"term":"GO:0006896"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00916":null,"SJAG_01324":null,"SJAG_01488":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02240":null,"SJAG_02453":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03848":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04902":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"Golgi to vacuole transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Golgi to vacuole vesicle-mediated transport","type":"exact"}],"termid":"GO:0006896","terms_by_termid":{"GO:0006896":null}}


id: PBO:0088997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi-mediated silencing protein, human NRDE2 ortholog Nrl1","termid":"PBO:0088997"}


id: FYPO:0005501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"protein localization to cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein mislocalized from cortical regions to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0005501"}


id: GO:0006451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuation of translation beyond a stop codon by the use of a special tRNA that recognizes the UAG and UGA codons as modified amino acids, rather than as termination codons.","definition_xrefs":["GOC:jsg","PMID:11179232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational readthrough","synonyms":[{"name":"natural nonsense suppression","type":"related"}],"termid":"GO:0006451"}


id: PBO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates genes involved in thiamin biosynthesis","termid":"PBO:0001936"}


id: PBO:0030423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_endoplasmic_reticulum_membrane_present","termid":"PBO:0030423"}


id: PBO:0076122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STXBP5 antisense RNA 1","termid":"PBO:0076122"}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: PBO:0043016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule L1 like","termid":"PBO:0043016"}


id: PBO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 13","termid":"PBO:0070642"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0002541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-protein coupled receptor Stm1","termid":"PBO:0002541"}


id: PBO:0078737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1","termid":"PBO:0078737"}


id: GO:0047323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) = ADP + 3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphate.","definition_xrefs":["EC:2.7.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140096","GO:0016301","GO:0003824","GO:0004672"],"is_obsolete":false,"name":"[3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity","secondary_identifiers":["Reactome:R-HSA-5693148","RHEA:17301","MetaCyc:2.7.11.4-RXN"],"synonyms":[{"name":"3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) kinase activity","type":"related"},{"name":"ATP:3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) phosphotransferase activity","type":"related"},{"name":"BCK","type":"related"},{"name":"BCKD kinase activity","type":"related"},{"name":"BCODH kinase activity","type":"related"},{"name":"STK2","type":"related"},{"name":"[3-methyl-2-oxobutanoate dehydrogenase (lipoamide)] kinase activity","type":"exact"},{"name":"branched-chain 2-oxo acid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain alpha-ketoacid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain keto acid dehydrogenase kinase activity","type":"related"},{"name":"branched-chain oxo acid dehydrogenase kinase (phosphorylating) activity","type":"related"}],"termid":"GO:0047323"}


id: GO:0000326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A storage vacuole that contains a lytic vacuole; identified in plants.","definition_xrefs":["PMID:11739409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"storage vacuole","termid":"GO:0000322"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"protein storage vacuole","termid":"GO:0000326"}


id: PBO:0083372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps with verified gene BUD7/YOR299W; mutation affects bipolar budding and bud site selection, though phenotype could be due to the mutation's effects on BUD7","termid":"PBO:0083372"}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PomBase:mah","PMID:33574613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0005447"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: PR:Q874R1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho4 gene.","definition_xrefs":["UniProtKB:Q874R1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16A10.04","synonyms":[{"name":"Spom972h-rho4","type":"exact"}],"termid":"PR:Q874R1"}


id: PR:Q9P6R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13E7.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6R3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13E7.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.07","synonyms":[{"name":"Spom972h-SPBC13E7.07","type":"exact"}],"termid":"PR:Q9P6R3"}


id: PBO:0047767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOS like 2, AP-1 transcription factor subunit","termid":"PBO:0047767"}


id: FYPO:0003145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in prophase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic prophase","synonyms":[{"name":"abnormal cell cycle arrest in mitotic prophase during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in prophase during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in prophase","type":"exact"}],"termid":"FYPO:0003145"}


id: PBO:0052521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 34","termid":"PBO:0052521"}


id: GO:0072722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amitrole","synonyms":[{"name":"response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072722"}


id: GO:2000785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of autophagosome assembly.","definition_xrefs":["GOC:autophagy","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"autophagosome assembly","termid":"GO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagosome assembly","synonyms":[{"name":"regulation of PAS formation","type":"related"},{"name":"regulation of autophagic vacuole assembly","type":"exact"},{"name":"regulation of autophagic vacuole formation","type":"related"},{"name":"regulation of autophagosome biosynthesis","type":"exact"},{"name":"regulation of autophagosome formation","type":"exact"}],"termid":"GO:2000785"}


id: PBO:0076903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 101","termid":"PBO:0076903"}


id: MOD:01342
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00530. Remap to MOD:00530.","definition_xrefs":["Unimod:162","PubMed:12148805"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01342 selenium substitution for sulfur - site M (obsolete MOD:01342)","synonyms":[{"name":"Delta:S(-1)Se(1)","type":"related"},{"name":"Selenium replaces sulphur","type":"related"}],"termid":"MOD:01342"}


id: PBO:0051376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR22-2 (pseudogene)","termid":"PBO:0051376"}


id: PBO:0036442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidative stress transcription corepressor Oxs1","termid":"PBO:0036442"}


id: PBO:0065428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 1","termid":"PBO:0065428"}


id: GO:0052023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of salicylic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of salicylic acid levels in host (obsolete GO:0052023)","synonyms":[{"name":"modulation by organism of salicylic acid levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052023"}


id: GO:0051057
data:
  {"annotated_genes":["SJAG_04776","SJAG_03048","SJAG_00082","SJAG_01805","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97843,105811,85722,89432,83327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of small GTPase mediated signal transduction","type":"narrow"},{"name":"positive regulation of small GTPase-mediated signal transduction","type":"exact"},{"name":"stimulation of small GTPase mediated signal transduction","type":"narrow"},{"name":"up regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"up-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"upregulation of small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0051057","terms_by_termid":{"GO:0031031":null}}


id: GO:0071906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CRD (context dependent regulatory) domain, a domain of about 130 residues that is the most divergent region among the LEF/TCF proteins.","definition_xrefs":["PMID:19460168","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CRD domain binding","synonyms":[{"name":"context dependent regulatory domain binding","type":"exact"}],"termid":"GO:0071906"}


id: SO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repressor molecule is required for transcription to stop.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_repressed","synonyms":[{"name":"transcriptionally repressed","type":"exact"}],"termid":"SO:0000126"}


id: SO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preserved.","definition_xrefs":["EBI:fc","SO:ke","EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missense_variant","secondary_identifiers":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html","SO:0001783","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","SO:0001584","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","loinc:LA6698-0","http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http://en.wikipedia.org/wiki/Missense_mutation"],"synonyms":[{"name":"ANNOVAR:nonsynonymous SNV","type":"related"},{"name":"Jannovar:missense_variant","type":"exact"},{"name":"Seattleseq:missense","type":"exact"},{"name":"Seattleseq:missense-near-splice","type":"related"},{"name":"VAAST:missense_variant","type":"exact"},{"name":"VAAST:non_synonymous_codon","type":"related"},{"name":"VAT:nonsynonymous","type":"exact"},{"name":"VEP:missense_variant","type":"exact"},{"name":"missense","type":"exact"},{"name":"missense codon","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_CODING","type":"exact"}],"termid":"SO:0001583"}


id: GO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor activity","synonyms":[{"name":"MCH receptor","type":"exact"}],"termid":"GO:0030273"}


id: GO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism effects a change that affects the induced systemic resistance in the host organism; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of host induced systemic resistance","secondary_identifiers":["GO:0052298"],"synonyms":[{"name":"modulation by organism of induced systemic resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of induced systemic resistance in host","type":"exact"}],"termid":"GO:0052159"}


id: GO:0010305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the leaf of vascular plants.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf vascular tissue pattern formation","termid":"GO:0010305"}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: FYPO:0002579
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature transfer RNA (tRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total tRNA or a specific tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"altered mature tRNA level during vegetative growth","synonyms":[{"name":"abnormal tRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature tRNA level during vegetative growth","type":"exact"},{"name":"altered mature cellular transfer RNA level during vegetative growth","type":"exact"},{"name":"altered mature tRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature tRNA transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0002579"}


id: PBO:0084738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; forms complex with Ups2p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; mutation affects mitochondrial distribution and morphology; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084738"}


id: PBO:0067668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 847, pseudogene","termid":"PBO:0067668"}


id: PBO:0078949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 1-1","termid":"PBO:0078949"}


id: GO:1902628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of assembly of a large subunit precursor of preribosome.","definition_xrefs":["PMID:22735702","GOC:di","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of assembly of large subunit precursor of preribosome","termid":"GO:1902627"},{"relation_name":"positively_regulates","term_name":"assembly of large subunit precursor of preribosome","termid":"GO:1902626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of assembly of large subunit precursor of preribosome","synonyms":[{"name":"activation of 66S preribosome assembly","type":"narrow"},{"name":"activation of 66S preribosome formation","type":"narrow"},{"name":"activation of assembly of large subunit precursor of preribosome","type":"narrow"},{"name":"activation of preribosome, large subunit precursor formation","type":"narrow"},{"name":"positive regulation of 66S preribosome assembly","type":"narrow"},{"name":"positive regulation of 66S preribosome formation","type":"narrow"},{"name":"positive regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"up regulation of 66S preribosome assembly","type":"narrow"},{"name":"up regulation of 66S preribosome formation","type":"narrow"},{"name":"up regulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"up regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"up-regulation of 66S preribosome assembly","type":"narrow"},{"name":"up-regulation of 66S preribosome formation","type":"narrow"},{"name":"up-regulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"up-regulation of preribosome, large subunit precursor formation","type":"exact"},{"name":"upregulation of 66S preribosome assembly","type":"narrow"},{"name":"upregulation of 66S preribosome formation","type":"narrow"},{"name":"upregulation of assembly of large subunit precursor of preribosome","type":"exact"},{"name":"upregulation of preribosome, large subunit precursor formation","type":"exact"}],"termid":"GO:1902628"}


id: PBO:0018230
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae BTS1","termid":"PBO:0018230"}


id: PBO:0085625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in establishment of cell polarity and bud emergence; interacts with the Rho1p small GTP-binding protein and with the Rho-type GTPase Cdc42p; involved in maintenance of proper telomere length","termid":"PBO:0085625"}


id: PBO:0086313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with roles in exocytosis and cation homeostasis; functions in docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; interacts with SNARE protein Sec9p; homolog of Drosophila lethal giant larvae tumor suppressor; SRO77 has a paralog, SRO7, that arose from the whole genome duplication","termid":"PBO:0086313"}


id: GO:0140456
data:
  {"annotated_genes":["SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90894],"is_not":false,"summary":null,"term":"GO:0140456"}]},"cv_name":"biological_process","definition":"The release of duplicated meiotic spindle pole bodies (SPBs).","definition_xrefs":["PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body separation","termid":"GO:0110100"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"initial meiotic spindle pole body separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"initial spindle pole body separation involved in meiosis I","type":"exact"},{"name":"meiotic spindle pole body duplication","type":"exact"}],"termid":"GO:0140456","terms_by_termid":{"GO:0140456":null}}


id: PBO:0031875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Hua1","termid":"PBO:0031875"}


id: GO:0043522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns.","definition_xrefs":["GOC:jl","InterPro:IPR002158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LRR domain binding","termid":"GO:0030275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"leucine zipper domain binding","synonyms":[{"name":"leucine zipper binding","type":"exact"}],"termid":"GO:0043522"}


id: PBO:0072848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 3","termid":"PBO:0072848"}


id: PBO:0065074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRICKLE2 antisense RNA 3","termid":"PBO:0065074"}


id: GO:0036031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the guanylyltransferase enzyme responsible for adding a 7-methylguanosine cap on pre-mRNA becomes associated with the RNA polymerase II holoenzyme complex and the 5' end of a transcript.","definition_xrefs":["GOC:bf","GOC:rb","PMID:10594013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"7-methylguanosine mRNA capping","termid":"GO:0006370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0016071","GO:0010467","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex","synonyms":[{"name":"capping enzyme targeting to RNA polymerase II","type":"exact"},{"name":"recruitment of guanylyltransferase to RNA polymerase II holoenzyme complex","type":"exact"}],"termid":"GO:0036031"}


id: GO:0046016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"},{"relation_name":"is_a","term_name":"regulation of transcription by glucose","termid":"GO:0046015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription by glucose","synonyms":[{"name":"activation of transcription by glucose","type":"narrow"},{"name":"stimulation of transcription by glucose","type":"narrow"},{"name":"up regulation of transcription by glucose","type":"exact"},{"name":"up-regulation of transcription by glucose","type":"exact"},{"name":"upregulation of transcription by glucose","type":"exact"}],"termid":"GO:0046016"}


id: PBO:0052396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C2","termid":"PBO:0052396"}


id: PBO:0109617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2 (pseudogene)","termid":"PBO:0109617"}


id: PBO:0073634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 20, pseudogene","termid":"PBO:0073634"}


id: PBO:0086391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative chitinase; functionally complements A. gossypii cts2 mutant sporulation defect","termid":"PBO:0086391"}


id: GO:1902081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transport","termid":"GO:0051926"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"negatively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"down regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"down-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"downregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"inhibition of calcium ion import into sarcoplasmic reticulum","type":"narrow"}],"termid":"GO:1902081"}


id: GO:0102878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-alpha-barbatene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.69","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"(+)-alpha-barbatene synthase activity","secondary_identifiers":["RHEA:29499","MetaCyc:RXN-8417"],"termid":"GO:0102878"}


id: GO:0060052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"neurofilament cytoskeleton organization","synonyms":[{"name":"neurofilament cytoskeleton organisation","type":"exact"},{"name":"neurofilament cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0060052"}


id: GO:1905487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16516839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of anterior/posterior axon guidance","termid":"GO:1905486"},{"relation_name":"negatively_regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterior/posterior axon guidance","synonyms":[{"name":"down regulation of anterior-posterior axon guidance","type":"exact"},{"name":"down regulation of anterior/posterior axon guidance","type":"exact"},{"name":"down regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"down-regulation of anterior-posterior axon guidance","type":"exact"},{"name":"down-regulation of anterior/posterior axon guidance","type":"exact"},{"name":"down-regulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"downregulation of anterior-posterior axon guidance","type":"exact"},{"name":"downregulation of anterior/posterior axon guidance","type":"exact"},{"name":"downregulation of anterior/posterior axon pathfinding","type":"exact"},{"name":"inhibition of anterior-posterior axon guidance","type":"narrow"},{"name":"inhibition of anterior/posterior axon guidance","type":"narrow"},{"name":"inhibition of anterior/posterior axon pathfinding","type":"narrow"},{"name":"negative regulation of anterior-posterior axon guidance","type":"exact"},{"name":"negative regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905487"}


id: _global:gene_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"definition \\\"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\\\"","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"_global:genomically_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_product_of","secondary_identifiers":["RO:0002204","GOREL:0001028"],"termid":"_global:gene_product_of"}


id: PBO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 3","termid":"PBO:0044029"}


id: PBO:0059538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site X","termid":"PBO:0059538"}


id: PBO:0071250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 91","termid":"PBO:0071250"}


id: GO:0006037
data:
  {"annotated_genes":["SJAG_00620","SJAG_04728","SJAG_00442","SJAG_03723","SJAG_03013","SJAG_04868","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[87421,96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"},{"annotations":[73778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006038"},{"annotations":[72148,77082,71037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034221"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in the walls of cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin metabolic process","termid":"GO:0006030"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_03013":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall chitin metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cell wall chitin metabolism","type":"exact"}],"termid":"GO:0006037","terms_by_termid":{"GO:0006038":null,"GO:0034217":null,"GO:0034221":null,"GO:0034232":null}}


id: GO:1990110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a callus is formed at a wound site. A plant callus is a portion of plant tissue that consists of mass of undifferentiated plant cells. It consists primarily of parenchyma cells but possibly contains other cell types as the callus begins to differentiate.","definition_xrefs":["ISBN:0070187517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"callus formation","termid":"GO:1990110"}


id: PR:Q06182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q06182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.15c","synonyms":[{"name":"Spom972h-swi10","type":"exact"}],"termid":"PR:Q06182"}


id: GO:0021846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of greater cell numbers in the forebrain due to cell division of progenitor cells.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in forebrain","termid":"GO:0021846"}


id: PATO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality that is relative low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"pigmented","termid":"PATO:0002248"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased pigmentation","synonyms":[{"name":"hypopigmented","type":"exact"}],"termid":"PATO:0002251"}


id: PR:Q9HE01
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE01"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C589.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.03c","synonyms":[{"name":"Spom972h-SPAC589.03c","type":"exact"}],"termid":"PR:Q9HE01"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: FYPO:0001919
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114436],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is broken into multiple small fragments that are smaller than a normal nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"fragmented nucleus during vegetative growth","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"fragmented nuclear DNA during vegetative growth","type":"related"},{"name":"fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"loss of nuclear integrity during vegetative growth","type":"related"}],"termid":"FYPO:0001919","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: PBO:0083118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor; required for pre-replication complex assembly","termid":"PBO:0083118"}


id: GO:0102607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3beta-hydroxy-12,15-cassadiene-11-one + NADPH + O2 + H+ = 2beta,3beta-dihydroxy-12,15-cassadiene-11-one + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxy-12,15-cassadiene-11-one 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15433"],"termid":"GO:0102607"}


id: GO:1902201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bacterial-type flagellum-dependent cell motility.","definition_xrefs":["GOC:cilia","GOC:jl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bacterial-type flagellum-dependent cell motility","synonyms":[{"name":"down regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"down-regulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"down-regulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"downregulation of bacterial-type flagellar cell motility","type":"exact"},{"name":"downregulation of flagellin-based flagellar cell motility","type":"exact"},{"name":"inhibition of bacterial-type flagellar cell motility","type":"narrow"},{"name":"inhibition of flagellin-based flagellar cell motility","type":"exact"},{"name":"negative regulation of bacterial-type flagellar cell motility","type":"related"},{"name":"negative regulation of flagellin-based flagellar cell motility","type":"exact"}],"termid":"GO:1902201"}


id: PBO:0075823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCO-spondin, pseudogene","termid":"PBO:0075823"}


id: GO:0021808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that results in the fluctuations in intracellular calcium that are responsible for the initiation of movement as a component of the process of cerebral cortex glial-mediated radial migration.","definition_xrefs":["GOC:cls","GOC:dph","PMID:12626695","GO_REF:0000021","GOC:dgh","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic calcium signaling involved in initiation of cell movement in glial-mediated radial cell migration (obsolete GO:0021808)","synonyms":[{"name":"cytosolic calcium signalling involved in the initiation of cell movement in glial-mediated radial cell migration","type":"exact"}],"termid":"GO:0021808"}


id: GO:0072260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"metanephric interstitial fibroblast differentiation","termid":"GO:0072258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric interstitial fibroblast fate commitment","synonyms":[{"name":"metanephros interstitial cell fate commitment","type":"exact"}],"termid":"GO:0072260"}


id: PBO:0084429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major transcriptional repressor of DNA-damage-regulated genes; recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins","termid":"PBO:0084429"}


id: PBO:0091775
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SPT8","termid":"PBO:0091775"}


id: PBO:0082692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the histone deacetylase Rpd3L complex; possibly involved in cell fusion and invasive growth; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082692"}


id: GO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a leaf.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf abscission","termid":"GO:0060866"}


id: PBO:0031705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_necrotic_cell_death_(obsolete_FYPO:0000505)","termid":"PBO:0031705"}


id: GO:0046107
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"uracil metabolic process","termid":"GO:0019860"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"uracil biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil anabolism","type":"exact"},{"name":"uracil biosynthesis","type":"exact"},{"name":"uracil formation","type":"exact"},{"name":"uracil synthesis","type":"exact"}],"termid":"GO:0046107","terms_by_termid":{"GO:0006223":null}}


id: PBO:0058699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6827","termid":"PBO:0058699"}


id: PBO:0043881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB/ATF bZIP transcription factor","termid":"PBO:0043881"}


id: PR:P41887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock protein HSP 90-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.04c","secondary_identifiers":["UniProtKB:P41887"],"synonyms":[{"name":"Spom972h-HSP90AA1","type":"exact"}],"termid":"PR:P41887"}


id: GO:0017149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein biosynthetic process inhibitor activity (obsolete GO:0017149)","synonyms":[{"name":"protein anabolism inhibitor activity","type":"exact"},{"name":"protein biosynthetic process inhibitor activity","type":"exact"},{"name":"protein formation inhibitor activity","type":"exact"},{"name":"protein synthesis inhibitor activity","type":"exact"}],"termid":"GO:0017149"}


id: PBO:0057712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1298","termid":"PBO:0057712"}


id: PBO:0081162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein pseudogene 1","termid":"PBO:0081162"}


id: PBO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 1","termid":"PBO:0052191"}


id: PBO:0030540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030540"}


id: GO:0140082
data:
  {"annotated_genes":["SJAG_05012","SJAG_02299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87193,105271],"is_not":false,"summary":null,"term":"GO:0140082"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to an existing ubiquitin chain via the reaction X-ubiquitin + Y-ubiquitin = Y-ubiquitin-ubiquitin + X, where both the X-ubiquitin and Y-ubiquitin-ubiquitin linkages are thioester bonds between the C-terminal glycine of ubiquitin and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["PMID:28552615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase activity","termid":"GO:0061665"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02299":null,"SJAG_05012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746","GO:0019787","GO:0140096"],"is_obsolete":false,"name":"SUMO-ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140082","terms_by_termid":{"GO:0140082":null}}


id: GO:0090048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription regulator activity (obsolete GO:0090048)","synonyms":[{"name":"negative regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090048"}


id: GO:0031834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurokinin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"neurokinin receptor binding","synonyms":[{"name":"neurokinin receptor ligand","type":"narrow"}],"termid":"GO:0031834"}


id: PBO:0035765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0035765"}


id: PBO:0039129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent in melanoma 2","termid":"PBO:0039129"}


id: PBO:0110389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3B","termid":"PBO:0110389"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: PBO:0045923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 15, pseudogene","termid":"PBO:0045923"}


id: PBO:0083606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 5' end of essential CDC42/YLR229C gene which encodes a small Rho-like GTPase essential for establishment and maintenance of cell polarity","termid":"PBO:0083606"}


id: PBO:0072851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 1","termid":"PBO:0072851"}


id: PBO:0083978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II catalytic subunit; required to trim the final glucose in N-linked glycans; required for normal cell wall synthesis; mutations in rot2 suppress tor2 mutations, and are synthetically lethal with rot1 mutations","termid":"PBO:0083978"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: PR:O74897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.13","synonyms":[{"name":"Spom972h-swc5","type":"exact"}],"termid":"PR:O74897"}


id: PBO:0028589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intermittent_monopolar_cell_growth","termid":"PBO:0028589"}


id: PBO:0071171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 11","termid":"PBO:0071171"}


id: PBO:0089761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific family with conserved tryptophan","termid":"PBO:0089761"}


id: GO:0000082
data:
  {"annotated_genes":["SJAG_02810","SJAG_03699","SJAG_03048","SJAG_00169","SJAG_00991","SJAG_01825","SJAG_01401","SJAG_00996","SJAG_01311","SJAG_00071","SJAG_01210","SJAG_02026","SJAG_02404","SJAG_03160","SJAG_05346","SJAG_03591","SJAG_02723","SJAG_01187","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73635,104507,107287],"is_not":false,"summary":null,"term":"GO:0000082"},{"annotations":[97817,84694,111063,104217,97106],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[86970,104984],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[94406,88946,87796,87391],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[112202,101202,102030],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[111065,97110,101361,110511,87397],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle transition by which a cell in G1 commits to S phase. The process begins with the build up of G1 cyclin-dependent kinase (G1 CDK), resulting in the activation of transcription of G1 cyclins. The process ends with the positive feedback of the G1 cyclins on the G1 CDK which commits the cell to S phase, in which DNA replication is initiated.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"},{"relation_name":"is_a","term_name":"cell cycle G1/S phase transition","termid":"GO:0044843"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000082","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:1900087":null,"GO:2000134":null}}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: GO:0050069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + NAD+ = 1,2-didehydropiperidine-2-carboxylate + NH3 + NADH.","definition_xrefs":["MetaCyc:LYSINE-DEHYDROGENASE-RXN","EC:1.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"lysine dehydrogenase activity","secondary_identifiers":["RHEA:18505"],"synonyms":[{"name":"L-lysine:NAD+ oxidoreductase (deaminating, cyclizing)","type":"related"}],"termid":"GO:0050069"}


id: GO:1900464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular hyperosmotic salinity response by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:16278455","GOC:TermGenie","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900464)","synonyms":[{"name":"negative regulation of cellular response to hyperosmotic salt stress by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900464"}


id: PBO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb1","termid":"PBO:0090656"}


id: PBO:0089023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPATCH11 ortholog","termid":"PBO:0089023"}


id: GO:0001188
data:
  {"annotated_genes":["SJAG_00692","SJAG_03956","SJAG_02813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76736,104476,107190],"is_not":false,"summary":null,"term":"GO:0001188"}]},"cv_name":"biological_process","definition":"The formation of a large multiprotein-DNA complex that self-assembles on gene promoter through the sequential recruitment of the general initiation factors that compose the preinitiation complex (PIC) (which includes including UBF, SL1, RRN3 and TBP in human). The PIC engages RNA polymerase I on its DNA template strand and sparks polymerization of the first few RNA nucleotides.","definition_xrefs":["PMID:14969726","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription preinitiation complex assembly","termid":"GO:0070897"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase I promoter","termid":"GO:0006361"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00692":null,"SJAG_02813":null,"SJAG_03956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"RNA polymerase I preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0001189"],"synonyms":[{"name":"RNA polymerase I transcriptional preinitiation complex assembly","type":"exact"},{"name":"RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript","type":"narrow"},{"name":"RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nucleolar primary rRNA transcript","type":"narrow"}],"termid":"GO:0001188","terms_by_termid":{"GO:0001188":null}}


id: PBO:0046158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR long non-coding downstream RNA","termid":"PBO:0046158"}


id: PBO:0086728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication","termid":"PBO:0086728"}


id: FYPO:0001827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glucose into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal glucose import","synonyms":[{"name":"abnormal glucose import across plasma membrane","type":"exact"},{"name":"abnormal glucose import during mitotic cell cycle","type":"related"},{"name":"abnormal glucose import during vegetative growth","type":"exact"},{"name":"abnormal glucose import into cell","type":"exact"},{"name":"abnormal glucose uptake","type":"exact"}],"termid":"FYPO:0001827"}


id: PBO:0040274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 8","termid":"PBO:0040274"}


id: PBO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.10","termid":"PBO:0002323"}


id: PBO:0077694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase non receptor 2","termid":"PBO:0077694"}


id: PBO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitophagy receptor Atg43","termid":"PBO:0090144"}


id: FYPO:0008105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a greater extent than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin mobility","termid":"FYPO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin mobility during stationary phase","termid":"FYPO:0008105"}


id: PBO:0072309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 6","termid":"PBO:0072309"}


id: PBO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wybutosine biosynthesis protein Tyw3 (predicted)","termid":"PBO:0002406"}


id: PBO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6B","termid":"PBO:0052066"}


id: FYPO:0006610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein that is normally localized intermittently to the Cdr2 medial cortical node complex is associated with the complex for periods of longer duration than normal.","definition_xrefs":["PMID:29514920","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intermittent protein localization to Cdr2 medial cortical node complex","termid":"FYPO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex","synonyms":[{"name":"increased duration of bursts of intermittent protein localization to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein localization bursts to Cdr2 medial cortical node complex","type":"related"},{"name":"increased duration of protein visits to Cdr2 medial cortical node complex","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"increased protein dwell time during intermittent localization to Cdr2 medial cortical node complex during vegetative growth","type":"exact"},{"name":"increased protein dwell time during transient localization to Cdr2 medial cortical node complex","type":"exact"}],"termid":"FYPO:0006610"}


id: GO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"part_of","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation involved in immune response","synonyms":[{"name":"macrophage activation during immune response","type":"related"},{"name":"macrophage polarization involved in immune response","type":"exact"}],"termid":"GO:0002281"}


id: PBO:0057286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 506","termid":"PBO:0057286"}


id: PBO:0083908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavoprotein subunit of succinate dehydrogenase; couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; FAD binding to Sdh1p is required for the assembly of the succinate dehydrogenase subunits; mutations in human ortholog SDHA are associated with Leigh syndrome and predisposition to several cancers","termid":"PBO:0083908"}


id: MOD:01424
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a quinaldate, kynurenate, or xanthurenate group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinaldate modified residue","termid":"MOD:01424"}


id: PBO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 5","termid":"PBO:0052587"}


id: PBO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rhp51","termid":"PBO:0003697"}


id: PBO:0029107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0029107"}


id: PBO:0040421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V0D1 divergent transcript","termid":"PBO:0040421"}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: FYPO:0004860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased beta-glucan level","termid":"FYPO:0001194"},{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002946","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cell wall beta-glucan level","synonyms":[{"name":"increased cell wall beta-D-glucan level","type":"exact"},{"name":"increased cell wall beta-glucan accumulation","type":"related"},{"name":"increased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall beta-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0004860"}


id: PBO:0041306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 16","termid":"PBO:0041306"}


id: GO:0000248
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74762,77829],"is_not":false,"summary":null,"term":"GO:0000248"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+.","definition_xrefs":["MetaCyc:RXN3O-227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"},{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"C-5 sterol desaturase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-195664","Reactome:R-HSA-6807053"],"synonyms":[{"name":"sterol-C5-desaturase activity","type":"exact"}],"termid":"GO:0000248","terms_by_termid":{"GO:0000248":null}}


id: GO:0009400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:mah","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine phosphatase activity (obsolete GO:0009400)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0009400"}


id: GO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetyl-[citrate-oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + S-acetylphosphopantetheine = [citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)-acetate)] + pantetheine 4'-phosphate.","definition_xrefs":["EC:2.3.1.49","MetaCyc:2.3.1.49-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"deacetyl-[citrate-(pro-3S)-lyase] S-acetyltransferase activity","secondary_identifiers":["RHEA:20393"],"synonyms":[{"name":"S-acetyl phosphopantetheine:deacetyl citrate lyase S-acetyltransferase activity","type":"related"},{"name":"S-acetylphosphopantetheine:deacetyl-citrate-oxaloacetate-lyase((pro-3S)-CH2COO-rightacetate)S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase S-acetyltransferase activity","type":"related"},{"name":"deacetyl-citrate-(pro-3S)-lyase acetyltransferase activity","type":"related"}],"termid":"GO:0047187"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: GO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene biosynthetic process","secondary_identifiers":["Wikipedia:Leukotriene#Leukotriene_synthesis"],"synonyms":[{"name":"leukotriene anabolism","type":"exact"},{"name":"leukotriene biosynthesis","type":"exact"},{"name":"leukotriene formation","type":"exact"},{"name":"leukotriene synthesis","type":"exact"}],"termid":"GO:0019370"}


id: PBO:0065907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs","termid":"PBO:0065907"}


id: PBO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YBR121C","termid":"PBO:0016536"}


id: PBO:0088612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex subunit, human LAMTOR3 ortholog","termid":"PBO:0088612"}


id: GO:0016471
data:
  {"annotated_genes":["SJAG_04015","SJAG_01817","SJAG_00212","SJAG_04955","SJAG_05294","SJAG_01913","SJAG_01397","SJAG_02023","SJAG_01471","SJAG_02782","SJAG_00136","SJAG_00516","SJAG_03406","SJAG_01447"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85565,99344,85877,91239,95433,87699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[92180,71320,94444,98112,105176,113784,95507,83818],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen.","definition_xrefs":["GOC:mah","ISBN:0716743663","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005773","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"vacuolar proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"vacuolar hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0016471","terms_by_termid":{"GO:0000220":null,"GO:0000221":null}}


id: GO:1902270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which (R)-carnitine is transported across a membrane.","definition_xrefs":["PMID:23755272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(R)-carnitine transport","termid":"GO:1900749"},{"relation_name":"is_a","term_name":"carnitine transmembrane transport","termid":"GO:1902603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}


id: PBO:0079305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2B","termid":"PBO:0079305"}


id: PBO:0082011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSWIM8 antisense RNA 1","termid":"PBO:0082011"}


id: GO:0018990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old chitin-based cuticlar fragments during the molting cycle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, chitin-based cuticle","termid":"GO:0018990"}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: GO:0046261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-nitrotoluene biosynthetic process (obsolete GO:0046261)","synonyms":[{"name":"4-nitrotoluene anabolism","type":"exact"},{"name":"4-nitrotoluene biosynthesis","type":"exact"},{"name":"4-nitrotoluene biosynthetic process","type":"exact"},{"name":"4-nitrotoluene formation","type":"exact"},{"name":"4-nitrotoluene synthesis","type":"exact"},{"name":"4NT biosynthesis","type":"exact"},{"name":"4NT biosynthetic process","type":"exact"}],"termid":"GO:0046261"}


id: GO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4 biosynthetic process","synonyms":[{"name":"CD4 anabolism","type":"exact"},{"name":"CD4 biosynthesis","type":"exact"},{"name":"CD4 formation","type":"exact"},{"name":"CD4 synthesis","type":"exact"}],"termid":"GO:0045222"}


id: PBO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 71","termid":"PBO:0071230"}


id: GO:1902997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:sjp","GOC:TermGenie","GO_REF:0000058","PMID:15897157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inclusion body assembly","termid":"GO:0090084"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"negatively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neurofibrillary tangle assembly","synonyms":[{"name":"down regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"downregulation of neurofibrillary tangle formation","type":"exact"},{"name":"downregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of neurofibrillary tangle formation","type":"exact"},{"name":"negative regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902997"}


id: GO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the blood vessels of the heart over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vasculature development","synonyms":[{"name":"cardiac blood vessel development","type":"exact"},{"name":"cardiac vasculature development","type":"exact"},{"name":"coronary blood vessel development","type":"exact"},{"name":"heart blood vessel development","type":"exact"},{"name":"heart vasculature development","type":"exact"}],"termid":"GO:0060976"}


id: PBO:0001239
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"from cerevisie","termid":"PBO:0001239"}


id: GO:0043134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["UBERON:0001046","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hindgut contraction","termid":"GO:0043134"}


id: PBO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily (predicted)","termid":"PBO:0003419"}


id: PBO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_export","termid":"PBO:0031702"}


id: GO:0033182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of a ubiquitin group to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone ubiquitination (obsolete GO:0033182)","termid":"GO:0033182"}


id: GO:0008474
data:
  {"annotated_genes":["SJAG_02268","SJAG_00734","SJAG_02056","SJAG_03377","SJAG_00774"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70470,89143,96424,104327,106183],"is_not":false,"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein.","definition_xrefs":["EC:3.1.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"},{"relation_name":"is_a","term_name":"palmitoyl hydrolase activity","termid":"GO:0098599"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9647994","MetaCyc:3.1.2.22-RXN","Reactome:R-HSA-5690517","Reactome:R-HSA-8933328","RHEA:19233","Reactome:R-HSA-203613"],"synonyms":[{"name":"palmitoyl-[protein] hydrolase","type":"broad"},{"name":"palmitoyl-protein hydrolase activity","type":"exact"},{"name":"palmitoyl-protein thioesterase activity","type":"exact"},{"name":"palmitoyl-protein thiolesterase activity","type":"exact"}],"termid":"GO:0008474","terms_by_termid":{"GO:0008474":null}}


id: PATO:0001617
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted in form.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deformed","synonyms":[{"name":"disfigured","type":"related"},{"name":"distorted","type":"related"}],"termid":"PATO:0001617"}


id: PBO:0042561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 3","termid":"PBO:0042561"}


id: PBO:0086390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative checkpoint factor in transcription; binds to U2 snRNA and Prp11p; regulates toggling of the U2 snRNA stem II region between different structures; contains two RNA recognition motifs (RRMs)","termid":"PBO:0086390"}


id: PBO:0079530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 5","termid":"PBO:0079530"}


id: PBO:0088497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1","termid":"PBO:0088497"}


id: PBO:0042932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell growth regulator with EF-hand domain 1","termid":"PBO:0042932"}


id: PBO:0089933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36","termid":"PBO:0089933"}


id: PBO:0077022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4 pseudogene 1","termid":"PBO:0077022"}


id: GO:0005112
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Notch (N) protein, a surface receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Notch binding","synonyms":[{"name":"N binding","type":"exact"},{"name":"N ligand","type":"narrow"},{"name":"Notch ligand","type":"narrow"},{"name":"Notch receptor binding","type":"exact"}],"termid":"GO:0005112"}


id: GO:0140615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA.","definition_xrefs":["PMID:12376641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-dependent citrate lyase complex","synonyms":[{"name":"citrate lyase complex","type":"broad"},{"name":"citrate synthase complex","type":"broad"}],"termid":"GO:0140615"}


id: SO:0000020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of double stranded RNA where the bases do not conform to WC base pairing. The loop is closed on both sides by canonical base pairing. If the interruption to base pairing occurs on one strand only, it is known as a bulge.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_internal_loop","synonyms":[{"name":"RNA internal loop","type":"exact"}],"termid":"SO:0000020"}


id: GO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a decanoyl (CH3-[CH2]8-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"decanoyltransferase activity","termid":"GO:0034328"}


id: CHEBI:16467
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid that is the L-isomer of arginine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine","termid":"CHEBI:16467"}


id: PBO:0084002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol kinase; converts glycerol to glycerol-3-phosphate; glucose repression of expression is mediated by Adr1p and Ino2p-Ino4p; derepression of expression on non-fermentable carbon sources is mediated by Opi1p and Rsf1p","termid":"PBO:0084002"}


id: SO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_secondary_structure","synonyms":[{"name":"INSDC_feature:misc_structure","type":"exact"},{"name":"sequence secondary structure","type":"exact"}],"termid":"SO:0000002"}


id: PBO:0012248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 5, Pup2 (predicted)","termid":"PBO:0012248"}


id: FYPO:0009008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PomBase:mlr","PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased vegetative cell population viability","synonyms":[{"name":"increased cell population viability during vegetative growth","type":"exact"}],"termid":"FYPO:0009008"}


id: PBO:0075326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of glucose, autophagy associated 1","termid":"PBO:0075326"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: PBO:0091131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1","termid":"PBO:0091131"}


id: PBO:0069269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 525, pseudogene","termid":"PBO:0069269"}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: FYPO:0004177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h- mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h- cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h- cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h- cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h- cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h- cells","type":"exact"}],"termid":"FYPO:0004177"}


id: PBO:0059991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 11","termid":"PBO:0059991"}


id: GO:0035432
data:
  {"annotated_genes":["SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85649],"is_not":false,"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of gluconate across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of gluconate transmembrane transport","termid":"GO:0035430"},{"relation_name":"positively_regulates","term_name":"gluconate transmembrane transport","termid":"GO:0035429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0032895"],"synonyms":[{"name":"activation of gluconate transport","type":"narrow"},{"name":"induction of gluconate transport","type":"narrow"},{"name":"positive regulation of gluconate membrane transport","type":"exact"},{"name":"positive regulation of gluconate transport","type":"related"},{"name":"stimulation of gluconate transport","type":"narrow"},{"name":"up regulation of gluconate transport","type":"exact"},{"name":"up-regulation of gluconate transport","type":"exact"},{"name":"upregulation of gluconate transport","type":"exact"}],"termid":"GO:0035432","terms_by_termid":{"GO:0035432":null}}


id: PBO:0028328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028328"}


id: GO:0010032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compaction of chromatin structure prior to meiosis in eukaryotic cells.","definition_xrefs":["PMID:10072401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic chromosome condensation","synonyms":[{"name":"chromosome condensation involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0010032"}


id: PATO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A malformed quality inhering in a bearer by virtue of the bearer's gross morphology containing only what are normally ventral structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malformed","termid":"PATO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventralized","termid":"PATO:0000636"}


id: PR:O13933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chitobiosyldiphosphodolichol beta-mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00419","PANTHER:PTHR13036:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitobiosyldiphosphodolichol beta-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.14","secondary_identifiers":["UniProtKB:O13933"],"synonyms":[{"name":"GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GDP-mannose-dolichol diphosphochitobiose mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG1","type":"exact"},{"name":"asparagine-linked glycosylation protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1,4-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13933"}


id: PBO:0082684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the exomer complex; the exomer which also contains Csh6p, Bch1p, Bch2p, and Bud7, is involved in the export of select proteins, such as chitin synthase Chs3p, from the Golgi to the plasma membrane; interacts selectively with the activated, GTP-bound form of Arf1p; Chs5p is the only protein with a BRCT domain that is not localized to the nucleus","termid":"PBO:0082684"}


id: PR:G2TRU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.17","synonyms":[{"name":"Spom972h-wtf15","type":"exact"}],"termid":"PR:G2TRU7"}


id: GO:0071177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071177"}


id: GO:2000129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of octopamine or tyramine signaling pathway","termid":"GO:2000126"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"negatively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of octopamine signaling pathway","synonyms":[{"name":"negative regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000129"}


id: PBO:0038611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 7","termid":"PBO:0038611"}


id: GO:0051356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events during equilibrioception required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual input plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual perception","termid":"GO:0007601"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual perception involved in equilibrioception","synonyms":[{"name":"equilibrioception by visual perception","type":"narrow"},{"name":"perception of orientation with respect to gravity by visual perception","type":"exact"},{"name":"visual perception during equilibrioception","type":"related"}],"termid":"GO:0051356"}


id: GO:0090502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis, endonucleolytic (obsolete GO:0090502)","termid":"GO:0090502"}


id: PBO:0065703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 1","termid":"PBO:0065703"}


id: GO:0072580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lysine residue in a protein to produce (2S)-2-amino-6-([(3S)-3,6-diaminohexanoyl]amino)hexanoic acid, and the subsequent hydroxylation of the modified lysine residue. This modification is observed in, and is probably unique to, the prokaryotic translation elongation factor P (EF-P).","definition_xrefs":["GOC:mah","GOC:curators","PMID:22706199","PMID:20729861","RESID:AA0531","GOC:imk","RESID:AA0530"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type EF-P lysine modification","synonyms":[{"name":"EF-P modification pathway","type":"exact"}],"termid":"GO:0072580"}


id: PBO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 7-27","termid":"PBO:0051079"}


id: GO:0035910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ascending aorta are generated and organized. The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["GOC:dgh","UBERON:0001496","MA:0002570","Wikipedia:Ascending_aorta","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"ascending aorta development","termid":"GO:0035905"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascending aorta morphogenesis","termid":"GO:0035910"}


id: SO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic variable region which closely resembles a known functional T receptor variable gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the variable region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_V_pseudogene","synonyms":[{"name":"T cell receptor V pseudogene","type":"exact"},{"name":"T cell receptor Variable pseudogene","type":"exact"},{"name":"TR V pseudogene","type":"exact"},{"name":"T_cell_receptor_V_pseudogene","type":"exact"},{"name":"T_cell_receptor_Variable_pseudogene","type":"exact"}],"termid":"SO:0002103"}


id: GO:0014718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of activation of satellite cell involved in skeletal muscle regeneration. The activation of satellite cell is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue regeneration","termid":"GO:0043415"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014718"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: FYPO:0007305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 5 of histone H4 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K5 acetylation during vegetative growth","termid":"FYPO:0005309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H4-K5 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H4K5 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H4-K5 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H4K5 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007305"}


id: GO:0045331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme-M 7-mercaptoheptanoylthreonine-phosphate heterodisulfide + H2 = coenzyme-M + N-(7-mercaptoheptanoyl)threonine O3-phosphate.","definition_xrefs":["EC:1.12.99.2"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity (obsolete GO:0045331)","synonyms":[{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulfide hydrogenase activity","type":"exact"},{"name":"coenzyme-M-7-mercaptoheptanoylthreonine-phosphate-heterodisulphide hydrogenase activity","type":"exact"},{"name":"heterodisulfide reductase activity","type":"exact"}],"termid":"GO:0045331"}


id: GO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"negatively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-13 production","secondary_identifiers":["GO:2000666","GO:0045367"],"synonyms":[{"name":"down regulation of interleukin-13 production","type":"exact"},{"name":"down-regulation of interleukin-13 production","type":"exact"},{"name":"downregulation of interleukin-13 production","type":"exact"},{"name":"inhibition of interleukin-13 production","type":"narrow"},{"name":"negative regulation of IL-13 production","type":"exact"},{"name":"negative regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032696"}


id: GO:0072475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle, is received and converted into a molecular signal, contributing to a mitotic cell cycle spindle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic spindle checkpoint (obsolete GO:0072475)","synonyms":[{"name":"detection of stimulus involved in mitotic cell cycle spindle checkpoint","type":"exact"},{"name":"mitotic cell cycle spindle checkpoint sensor mechanism","type":"related"},{"name":"mitotic cell cycle spindle checkpoint sensor process","type":"related"},{"name":"sensing involved in mitotic cell cycle spindle checkpoint","type":"related"}],"termid":"GO:0072475"}


id: GO:0032446
data:
  {"annotated_genes":["SJAG_03843","SJAG_05297","SJAG_05032","SJAG_03896","SJAG_00878","SJAG_02082","SJAG_01776","SJAG_03950","SJAG_01302","SJAG_03932","SJAG_00604","SJAG_00727","SJAG_02503","SJAG_01018","SJAG_03616","SJAG_00615","SJAG_01985","SJAG_00033"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57463],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033234"},{"annotations":[84990,78323,74407,71534,72600,73678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[74846,75089,93307,109846,104871,72381,72371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[74025,101246,70764,103745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00727":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01302":null,"SJAG_01776":null,"SJAG_01985":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_03950":null,"SJAG_05032":null,"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein modification by small protein conjugation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0032446","terms_by_termid":{"GO:0016925":null,"GO:0032447":null,"GO:0033234":null,"GO:0045116":null}}


id: PBO:0050275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 5","termid":"PBO:0050275"}


id: PR:Q9US13
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10539:SF0","PRO:DNx","OMA:SCHPO00842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.05","secondary_identifiers":["UniProtKB:Q9US13"],"synonyms":[{"name":"Spom972h-PSMD13","type":"exact"}],"termid":"PR:Q9US13"}


id: GO:0140384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of non-pathogenic parasites into pathogenic metacyclic parasites in the Trypanosomatidae species. The pathogenic parasites are known as metacyclic trypomastigotes in Trypanosoma and metacyclic promastigotes in Leishmania.","definition_xrefs":["PMID:12152483","PMID:2659372","PMID:29409544","PMID:21514274","PMID:29091711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metacyclogenesis","termid":"GO:0140384"}


id: SO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of a T-cell receptor chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_C_Gene","synonyms":[{"name":"T_cell_receptor_C_gene","type":"exact"}],"termid":"SO:0002134"}


id: GO:0014810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0055085"],"is_obsolete":false,"name":"positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014810"}


id: PBO:0070344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 17","termid":"PBO:0070344"}


id: PBO:0085987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for normal growth rate at 15 degrees C; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; mtc4 is synthetically sick with cdc13-1","termid":"PBO:0085987"}


id: GO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process following disc eversion whereby imaginal discs fuse with adjacent disc derivatives to form a continuous adult epidermis.","definition_xrefs":["PMID:11494317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion","termid":"GO:0046528"}


id: GO:0018079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a halogen to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein halogenation (obsolete GO:0018079)","synonyms":[{"name":"protein amino acid halogenation","type":"exact"}],"termid":"GO:0018079"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: PBO:0059073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOCS2 divergent transcript","termid":"PBO:0059073"}


id: PBO:0084512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family with seven members; in S. cerevisiae, family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane and at the nuclear envelope; regulated by sterol binding; OSH2 has a paralog, SWH1, that arose from the whole genome duplication","termid":"PBO:0084512"}


id: GO:1990981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site involved in cell separation after cytokinesis (obsolete GO:1990981)","termid":"GO:1990981"}


id: PR:O74175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11722:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.05","secondary_identifiers":["UniProtKB:O74175"],"synonyms":[{"name":"SPAC664.05","type":"related"},{"name":"Spom972h-RPL13","type":"exact"}],"termid":"PR:O74175"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["PMID:15485915","PMID:16391231","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: PBO:0058306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4679-2","termid":"PBO:0058306"}


id: PBO:0046011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 6","termid":"PBO:0046011"}


id: GO:0051919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of fibrinolysis","termid":"GO:0051917"},{"relation_name":"positively_regulates","term_name":"fibrinolysis","termid":"GO:0042730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibrinolysis","synonyms":[{"name":"activation of fibrinolysis","type":"narrow"},{"name":"stimulation of fibrinolysis","type":"narrow"},{"name":"up regulation of fibrinolysis","type":"exact"},{"name":"up-regulation of fibrinolysis","type":"exact"},{"name":"upregulation of fibrinolysis","type":"exact"}],"termid":"GO:0051919"}


id: GO:1900842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"positively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"positive regulation of helvolic acid biosynthetic process","synonyms":[{"name":"up regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"up-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"upregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900842"}


id: PR:Q09787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.09 gene.","definition_xrefs":["UniProtKB:Q09787","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.09","synonyms":[{"name":"Spom972h-SPAC13G6.09","type":"exact"}],"termid":"PR:Q09787"}


id: PBO:0001055
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.3","termid":"PBO:0001055"}


id: GO:1901813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving astaxanthin.","definition_xrefs":["GOC:TermGenie","MetaCyc:PWY-5288","PMID:16434154","UniPathway:UPA00387","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"astaxanthin metabolic process","synonyms":[{"name":"astaxanthin metabolism","type":"exact"}],"termid":"GO:1901813"}


id: PBO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-biomechanically_related_to","termid":"PBO:0034152"}


id: PBO:0045316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 1","termid":"PBO:0045316"}


id: PBO:0027848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell","termid":"PBO:0027848"}


id: PBO:0040238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF7-NPFF readthrough","termid":"PBO:0040238"}


id: GO:0061216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the mesonephros progressing from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in mesonephros development (obsolete GO:0061216)","termid":"GO:0061216"}


id: GO:1902234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["GOC:TermGenie","PMID:22080863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation in thymus","termid":"GO:0033089"},{"relation_name":"is_a","term_name":"regulation of positive thymic T cell selection","termid":"GO:1902232"},{"relation_name":"positively_regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive thymic T cell selection","synonyms":[{"name":"activation of positive thymic T cell selection","type":"narrow"},{"name":"activation of positive thymic T lymphocyte selection","type":"narrow"},{"name":"activation of positive thymic T-cell selection","type":"narrow"},{"name":"activation of positive thymic T-lymphocyte selection","type":"narrow"},{"name":"positive regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"positive regulation of positive thymic T-cell selection","type":"exact"},{"name":"positive regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"up regulation of positive thymic T cell selection","type":"exact"},{"name":"up regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"up regulation of positive thymic T-cell selection","type":"exact"},{"name":"up regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"up-regulation of positive thymic T cell selection","type":"exact"},{"name":"up-regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"up-regulation of positive thymic T-cell selection","type":"exact"},{"name":"up-regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"upregulation of positive thymic T cell selection","type":"exact"},{"name":"upregulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"upregulation of positive thymic T-cell selection","type":"exact"},{"name":"upregulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902234"}


id: PR:Q9P781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.09c gene.","definition_xrefs":["UniProtKB:Q9P781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi apparatus membrane protein tvp38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.09c","synonyms":[{"name":"Spom972h-SPBC1711.09c","type":"exact"}],"termid":"PR:Q9P781"}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GO_REF:0000060","PMID:26644474","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: GO:2000463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that enhances the establishment or increases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.","definition_xrefs":["GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"modulation of excitatory postsynaptic potential","termid":"GO:0098815"},{"relation_name":"positively_regulates","term_name":"excitatory postsynaptic potential","termid":"GO:0060079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of excitatory postsynaptic potential","synonyms":[{"name":"positive regulation of EPSP","type":"related"},{"name":"positive regulation of excitatory post-synaptic membrane potential","type":"exact"}],"termid":"GO:2000463"}


id: GO:1902376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein denaturation that is involved in proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:21091378","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein denaturation involved in proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1902376)","synonyms":[{"name":"protein denaturation involved in proteasomal pathway","type":"exact"},{"name":"protein denaturation involved in proteasomal processing","type":"related"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"protein denaturation involved in proteasome pathway","type":"related"}],"termid":"GO:1902376"}


id: GO:0010922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of phosphatase activity. Phosphatases catalyze the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"},{"relation_name":"is_a","term_name":"positive regulation of dephosphorylation","termid":"GO:0035306"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatase activity","termid":"GO:0010922"}


id: PBO:0040337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 3","termid":"PBO:0040337"}


id: PBO:0076432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 8","termid":"PBO:0076432"}


id: FYPO:0000542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein transport is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of protein transport during vegetative growth","synonyms":[{"name":"increased rate of protein transport during mitotic cell cycle","type":"related"},{"name":"protein transport: increased rate","type":"related"}],"termid":"FYPO:0000542"}


id: PBO:0071342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29","termid":"PBO:0071342"}


id: MOD:00351
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-1-(phosphatidyl)ethanolamine.","definition_xrefs":["RESID:AA0346","PubMed:11100732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycyl-1-(phosphatidyl)ethanolamine","synonyms":[{"name":"(R)-1-hexadecanoyloxy-2-((Z)-9-octadecenoyloxy)-3-[2-(aminoacetylamino)ethyloxyphospho]propane","type":"exact"},{"name":"LIPID Phosphatidylethanolamine amidated glycine","type":"exact"},{"name":"N-glycyl-1-(phosphatidyl)ethanolamine","type":"exact"},{"name":"N-glycyl-1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine","type":"exact"}],"termid":"MOD:00351"}


id: GO:0120073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120073"}


id: GO:1900262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transferase activity","termid":"GO:0051338"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"regulation of DNA duplicase activity","type":"exact"},{"name":"regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of DNA polymerase I","type":"narrow"},{"name":"regulation of DNA polymerase II","type":"narrow"},{"name":"regulation of DNA polymerase III","type":"narrow"},{"name":"regulation of DNA polymerase V activity","type":"narrow"},{"name":"regulation of DNA polymerase alpha","type":"narrow"},{"name":"regulation of DNA polymerase beta","type":"narrow"},{"name":"regulation of DNA polymerase gamma","type":"narrow"},{"name":"regulation of DNA replicase activity","type":"exact"},{"name":"regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"regulation of Klenow fragment","type":"narrow"},{"name":"regulation of Taq DNA polymerase","type":"narrow"},{"name":"regulation of Taq Pol I","type":"narrow"},{"name":"regulation of Tca DNA polymerase","type":"narrow"},{"name":"regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"regulation of beta DNA polymerase activity","type":"narrow"},{"name":"regulation of delta DNA polymerase activity","type":"narrow"},{"name":"regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"regulation of duplicase","type":"broad"},{"name":"regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"regulation of eta DNA polymerase activity","type":"narrow"},{"name":"regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"regulation of iota DNA polymerase activity","type":"narrow"},{"name":"regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"regulation of mu DNA polymerase activity","type":"narrow"},{"name":"regulation of nu DNA polymerase activity","type":"narrow"},{"name":"regulation of sequenase","type":"related"},{"name":"regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"regulation of theta DNA polymerase activity","type":"narrow"},{"name":"regulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900262"}


id: GO:0047067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H(2) + menaquinone = reduced menaquinone.","definition_xrefs":["EC:1.12.5.1","RHEA:18641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, with a quinone or similar compound as acceptor","termid":"GO:0046994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydrogen:quinone oxidoreductase activity","secondary_identifiers":["MetaCyc:1.12.5.1-RXN","KEGG_REACTION:R02965"],"synonyms":[{"name":"hydrogen-ubiquinone oxidoreductase activity","type":"related"},{"name":"hydrogen:menaquinone oxidoreductase activity","type":"related"},{"name":"membrane-bound hydrogenase activity","type":"narrow"},{"name":"quinone-reactive Ni/Fe-hydrogenase activity","type":"related"}],"termid":"GO:0047067"}


id: GO:1901461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to formic acid","termid":"GO:1901460"},{"relation_name":"negatively_regulates","term_name":"response to formic acid","termid":"GO:1901425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to formic acid","synonyms":[{"name":"down regulation of response to formic acid","type":"exact"},{"name":"down-regulation of response to formic acid","type":"exact"},{"name":"downregulation of response to formic acid","type":"exact"},{"name":"inhibition of response to formic acid","type":"narrow"}],"termid":"GO:1901461"}


id: GO:1902830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spinal cord association neuron differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:21730158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of spinal cord association neuron differentiation","termid":"GO:1902829"},{"relation_name":"negatively_regulates","term_name":"spinal cord association neuron differentiation","termid":"GO:0021527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spinal cord association neuron differentiation","synonyms":[{"name":"down regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord association neuron differentiation","type":"exact"},{"name":"down-regulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"downregulation of spinal cord association neuron differentiation","type":"exact"},{"name":"downregulation of spinal cord dorsal interneuron differentiation","type":"exact"},{"name":"inhibition of spinal cord association neuron differentiation","type":"narrow"},{"name":"inhibition of spinal cord dorsal interneuron differentiation","type":"narrow"},{"name":"negative regulation of spinal cord dorsal interneuron differentiation","type":"exact"}],"termid":"GO:1902830"}


id: PBO:0044175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha 3","termid":"PBO:0044175"}


id: GO:0070976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-Interleukin receptor (TIR) domain of a protein. The TIR domain is an intracellular 200 residue domain that is found in the Toll protein, the interleukin-1 receptor (IL-1R), and MyD88; it contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components.","definition_xrefs":["InterPro:IPR000157","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"TIR domain binding","synonyms":[{"name":"Toll-Interleukin receptor domain binding","type":"exact"}],"termid":"GO:0070976"}


id: GO:0106366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + guanosine = ADP + GMP.","definition_xrefs":["PMID:7665468","RHEA:27710","PMID:10879466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"guanosine kinase activity","secondary_identifiers":["EC:2.7.1.73"],"termid":"GO:0106366"}


id: GO:0060032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the stucture of the notochord is destroyed in an embryo.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure regression","termid":"GO:0060033"},{"relation_name":"part_of","term_name":"notochord morphogenesis","termid":"GO:0048570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notochord regression","termid":"GO:0060032"}


id: PBO:0065945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD1 pseudogene 1","termid":"PBO:0065945"}


id: GO:0048641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle tissue development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue development","termid":"GO:0048641"}


id: GO:0090154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of sphingolipid biosynthetic process","termid":"GO:0090153"},{"relation_name":"positively_regulates","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044085","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sphingolipid biosynthetic process","termid":"GO:0090154"}


id: PBO:0018229
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ERG20","termid":"PBO:0018229"}


id: GO:0050105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulono-1,4-lactone + O2 = L-xylo-hex-3-ulonolactone + H2O2.","definition_xrefs":["MetaCyc:L-GULONOLACTONE-OXIDASE-RXN","EC:1.1.3.8","RHEA:32363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-gulonolactone oxidase activity","synonyms":[{"name":"GLO activity","type":"related"},{"name":"L-gulono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone oxidase activity","type":"related"},{"name":"L-gulono-gamma-lactone:O2 oxidoreductase activity","type":"related"},{"name":"L-gulono-gamma-lactone:oxidoreductase activity","type":"related"}],"termid":"GO:0050105"}


id: PBO:0062335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 74","termid":"PBO:0062335"}


id: PBO:0061171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 1-1","termid":"PBO:0061171"}


id: FYPO:0005934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the sumoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein sumoylation during vegetative growth","termid":"FYPO:0002777"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein sumoylation during vegetative growth","synonyms":[{"name":"abolished protein sumoylation during mitotic cell cycle","type":"related"},{"name":"protein sumoylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005934"}


id: PBO:0056339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 21","termid":"PBO:0056339"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: PBO:0066265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 5","termid":"PBO:0066265"}


id: PR:O94672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2302 gene.","definition_xrefs":["UniProtKB:O94672","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.04","synonyms":[{"name":"Spom972h-sec2302","type":"exact"}],"termid":"PR:O94672"}


id: PATO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000026 carbohydrate composition (obsolete PATO:0000026)","termid":"PATO:0000026"}


id: FYECO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which TEV protease was added to the medium or assay buffer. TEV protease cleaves a highly specific protein sequence and thus allows for artificial proteolytic regulation of genes engineered to contain the cleavage site.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ TEV protease","termid":"FYECO:0000270"}


id: PBO:0044964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 9","termid":"PBO:0044964"}


id: GO:0070726
data:
  {"annotated_genes":["SJAG_00974","SJAG_03013","SJAG_01321","SJAG_04238","SJAG_03483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83988,85961,87420,112876,109296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030476"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, and most prokaryotic cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"cell wall biogenesis","termid":"GO:0042546"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03483":null,"SJAG_04238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0044085"],"is_obsolete":false,"name":"cell wall assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070726","terms_by_termid":{"GO:0030476":null}}


id: PBO:0004577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase (predicted)","termid":"PBO:0004577"}


id: FYPO:0001595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of serine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal serine import","termid":"FYPO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased serine import","synonyms":[{"name":"decreased L-serine import","type":"exact"},{"name":"decreased L-serine import across plasma membrane","type":"exact"},{"name":"decreased serine import during mitotic cell cycle","type":"related"},{"name":"decreased serine import during vegetative growth","type":"exact"},{"name":"decreased serine import into cell","type":"exact"},{"name":"decreased serine uptake","type":"exact"},{"name":"reduced serine import","type":"exact"}],"termid":"FYPO:0001595"}


id: PBO:0053830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1095","termid":"PBO:0053830"}


id: PR:Q09676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase SPAC5H10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.03","synonyms":[{"name":"Spom972h-SPAC5H10.03","type":"exact"}],"termid":"PR:Q09676"}


id: PBO:0069735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1016, pseudogene","termid":"PBO:0069735"}


id: MOD:00080
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N5-methyl-L-glutamine.","definition_xrefs":["ChEBI:17592","PubMed:11118225","DeltaMass:166","PubMed:365579","PubMed:11875433","RESID:AA0071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"monomethylated L-glutamine","termid":"MOD:00722"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N5-methyl-L-glutamine","synonyms":[{"name":"(2S)-2-amino-5-methylamino-5-oxopentanoic acid","type":"exact"},{"name":"2-amino-N5-methylpentanediamic acid","type":"exact"},{"name":"MOD_RES N5-methylglutamine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N(delta)-methylglutamine","type":"exact"},{"name":"N-methylglutamine","type":"exact"},{"name":"N5-methyl-L-glutamine","type":"exact"},{"name":"N5-methylated L-glutamine","type":"exact"},{"name":"N5Me1Gln","type":"exact"},{"name":"gamma-methylglutamine","type":"exact"}],"termid":"MOD:00080"}


id: GO:0009885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokinin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"},{"relation_name":"is_a","term_name":"cytokinin receptor activity","termid":"GO:0009884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0038023","GO:0140096","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"transmembrane histidine kinase cytokinin receptor activity","termid":"GO:0009885"}


id: GO:1905960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.","definition_xrefs":["PMID:3355503","PMID:19684855","GOC:TermGenie","GO_REF:0000071","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 2","synonyms":[{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one","type":"exact"},{"name":"response to DIF-2","type":"related"},{"name":"response to DIF2","type":"related"}],"termid":"GO:1905960"}


id: FYPO:0003037
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_02763:allele-6":{"allele_type":"amino_acid_mutation","description":"S499A; S538A; T620A; T638A; S651A","gene_uniquename":"SJAG_02763","name":"ned1-5A","synonyms":[{"name":"refractory to potential proline-directed kinase phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-6"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03143","name":"sep1delta","uniquename":"SJAG_03143:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03444:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03444","name":"agn1delta","uniquename":"SJAG_03444:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T 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id: GO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-alanine + H2O = beta-alanine + acetate.","definition_xrefs":["EC:3.5.1.21","RHEA:23212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"N-acetyl-beta-alanine deacetylase activity","secondary_identifiers":["MetaCyc:N-ACETYL-BETA-ALANINE-DEACETYLASE-RXN","KEGG_REACTION:R00909"],"synonyms":[{"name":"N-acetyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0050117"}


id: PBO:0044874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 4B","termid":"PBO:0044874"}


id: PBO:0081700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 622","termid":"PBO:0081700"}


id: FYPO:0004144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of catalase activity is decreased during a cellular response to nitrosative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalase activity","termid":"FYPO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased catalase activity during cellular response to nitrosative stress","synonyms":[{"name":"decreased catalase activity during nitrosative stress","type":"exact"},{"name":"reduced catalase activity during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0004144"}


id: GO:1903382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:bf","PMID:23453807","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron apoptotic process","termid":"GO:0043524"},{"relation_name":"is_a","term_name":"negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902236"},{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903381"},{"relation_name":"negatively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0036483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of endoplasmic reticulum stress-induced neuron intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of neuron intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1903382"}


id: PBO:0055882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC7 antisense RNA 1","termid":"PBO:0055882"}


id: PBO:0091012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, RIO family Rio1","termid":"PBO:0091012"}


id: PBO:0081857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 790","termid":"PBO:0081857"}


id: PBO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Imp2","termid":"PBO:0090500"}


id: GO:0051675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pullulan to isopanose (6-alpha-maltosylglucose).","definition_xrefs":["EC:3.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"isopullulanase activity","secondary_identifiers":["MetaCyc:3.2.1.57-RXN"],"synonyms":[{"name":"pullulan 4-glucanohydrolase (isopanose-forming) activity","type":"exact"}],"termid":"GO:0051675"}


id: GO:0061377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland lobule over time, from its formation to the mature structure. A mammary gland lobule is a small rounded projection of the mammary gland.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland lobule development","termid":"GO:0061377"}


id: PBO:0110328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD36 pseudogene 2","termid":"PBO:0110328"}


id: GO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of endogenous cellular processes that result in the death of a cell as part of its development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death involved in cell development","synonyms":[{"name":"developmental programmed cell death","type":"broad"},{"name":"programmed cell death involved in development","type":"broad"}],"termid":"GO:0010623"}


id: PBO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 6","termid":"PBO:0040017"}


id: GO:0004552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-octanol + NAD+ = 1-octanal + H+ + NADH.","definition_xrefs":["RHEA:24620","EC:1.1.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"octanol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02878","MetaCyc:OCTANOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"1-octanol dehydrogenase activity","type":"related"},{"name":"octanol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0004552"}


id: PBO:0076163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase 1","termid":"PBO:0076163"}


id: PBO:0058735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6860","termid":"PBO:0058735"}


id: PBO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Tfb5 (predicted)","termid":"PBO:0004217"}


id: PBO:0052964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 cell adhesion molecule","termid":"PBO:0052964"}


id: PATO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000032 secondary product composition (obsolete PATO:0000032)","termid":"PATO:0000032"}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["GOC:jl","GOC:dph","GOC:krc","GOC:mah","GOC:cilia","PMID:9889124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: MOD:00599
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom with one methyl group.","definition_xrefs":["Unimod:34","PubMed:11875433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomethylated residue","synonyms":[{"name":"Me1Res","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"}],"termid":"MOD:00599"}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: PBO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 2","termid":"PBO:0070424"}


id: PBO:0062777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily A member 5","termid":"PBO:0062777"}


id: PBO:0031681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_degradation","termid":"PBO:0031681"}


id: PBO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1","termid":"PBO:0042373"}


id: GO:0004412
data:
  {"annotated_genes":["SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71256],"is_not":false,"summary":null,"term":"GO:0004412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + NADP+ = L-aspartate-4-semialdehyde + NADPH + H+.","definition_xrefs":["EC:1.1.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homoserine dehydrogenase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:HOMOSERDEHYDROG-RXN","RHEA:15761"],"termid":"GO:0004412","terms_by_termid":{"GO:0004412":null}}


id: GO:0006024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan biosynthetic process","termid":"GO:0006023"},{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosaminoglycan biosynthetic process","synonyms":[{"name":"glycosaminoglycan anabolism","type":"exact"},{"name":"glycosaminoglycan biosynthesis","type":"exact"},{"name":"glycosaminoglycan formation","type":"exact"},{"name":"glycosaminoglycan synthesis","type":"exact"}],"termid":"GO:0006024"}


id: GO:1900307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heptasaccharide transport","termid":"GO:1900295"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"negatively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maltoheptaose transport","synonyms":[{"name":"down regulation of maltoheptaose transport","type":"exact"},{"name":"down-regulation of maltoheptaose transport","type":"exact"},{"name":"downregulation of maltoheptaose transport","type":"exact"},{"name":"inhibition of maltoheptaose transport","type":"narrow"}],"termid":"GO:1900307"}


id: PBO:0005746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonate dioxygenase (predicted)","termid":"PBO:0005746"}


id: PBO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amitrole","termid":"PBO:0030706"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["MetaCyc:1PFRUCTPHOSN-RXN","RHEA:14213"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: PBO:0079835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-5 netrin receptor A","termid":"PBO:0079835"}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: PBO:0040481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2 like","termid":"PBO:0040481"}


id: GO:0047918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose = GDP-L-galactose.","definition_xrefs":["PMID:16366586","PMID:8910301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"GDP-mannose 3,5-epimerase activity","secondary_identifiers":["MetaCyc:RXN-7772","EC:5.1.3.18"],"synonyms":[{"name":"GDP-D-mannose:GDP-L-galactose epimerase activity","type":"related"},{"name":"GDPmannose 3,5-epimerase activity","type":"related"},{"name":"guanosine 5'-diphosphate D-mannose:guanosine 5'-diphosphate L-galactose epimerase activity","type":"related"}],"termid":"GO:0047918"}


id: PBO:0028712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_global_homologous_chromosome_pairing","termid":"PBO:0028712"}


id: PBO:0029337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation","termid":"PBO:0029337"}


id: PBO:0003856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa2","termid":"PBO:0003856"}


id: GO:0007490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the tergite are generated and organized. The tergite is the primary plate or sclerite forming the dorsal surface of any insect body segment.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"histoblast morphogenesis","termid":"GO:0007488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tergite morphogenesis","termid":"GO:0007490"}


id: PBO:0077186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 9","termid":"PBO:0077186"}


id: GO:0098046
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the translocation of proteins across the outer membrane via a transmembrane pore, formed by a beta-barrel, into the extracellular milieu or directly into host cells; the secreted proteins contain all the information required for translocation of an effector molecule through the cell envelope. The type V secretion systems includes the autotransporters (type Va), the two-partner secretion system (type Vb) and the Oca family (type Vc).","definition_xrefs":["GOC:bf","PMID:15590781","PMID:15119822","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"type V protein secretion system complex","synonyms":[{"name":"T5SS complex","type":"exact"},{"name":"autotransporter system complex","type":"narrow"}],"termid":"GO:0098046"}


id: FYPO:0002878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription during glucose starvation","synonyms":[{"name":"increased transcription during cellular response to glucose starvation","type":"exact"},{"name":"increased transcription during glucose depletion","type":"exact"},{"name":"increased transcription during glucose deprivation","type":"exact"},{"name":"increased transcription during glucose limitation","type":"related"},{"name":"increased transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0002878"}


id: PBO:0086883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor containing a WOPR domain; binds DNA in vitro; similar to C. albicans Wor1p transcription factor that regulates white-opaque switching; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086883"}


id: FYPO:0005912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling that occurs as part of meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:1905886","PMID:19139281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis-specific chromatin remodeling","synonyms":[{"name":"normal chromatin remodeling during meiosis I","type":"exact"},{"name":"normal chromatin remodeling involved in meiosis I","type":"exact"},{"name":"normal meiotic nuclear division-specific chromatin remodeling","type":"exact"}],"termid":"FYPO:0005912"}


id: PBO:0075482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 2","termid":"PBO:0075482"}


id: GO:0010496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intercellular transport","secondary_identifiers":["GO:1902585"],"synonyms":[{"name":"single organism intercellular transport","type":"related"},{"name":"single-organism intercellular transport","type":"related"}],"termid":"GO:0010496"}


id: PBO:0004398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex peripheral subunit Cog6 (predicted)","termid":"PBO:0004398"}


id: GO:2000932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellobiose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellobiose metabolic process","termid":"GO:2000930"},{"relation_name":"positively_regulates","term_name":"cellobiose metabolic process","termid":"GO:2000891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellobiose metabolic process","synonyms":[{"name":"positive regulation of cellobiose metabolism","type":"exact"}],"termid":"GO:2000932"}


id: PBO:0086553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL118C is not an essential gene","termid":"PBO:0086553"}


id: PBO:0083016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dehydrogenase involved in ubiquinone and sphingolipid metabolism; converts 4-hydroxybenzaldehyde into 4-hydroxybenzoate for ubiquinone anabolism, hexadecenal to hexadecenoic acid in sphingosine 1-phosphate catabolism; human homolog ALDH3A2, mutated in Sjogren-Larsson syndrome, can rescue yeast hfd1 mutant; human ALDH3A1, but not ALDH3A2, rescues pABA- respiratory growth phenotype of hfd1 null; data suggest that dual functions of Hfd1p have diverged in human ALDH3A1, ALDH3A2","termid":"PBO:0083016"}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:617517"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: PBO:0083177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL14L-XC, which is a telomeric X element core sequence on the left arm of chromosome XIV","termid":"PBO:0083177"}


id: GO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of dendritic spine development","termid":"GO:0060998"},{"relation_name":"negatively_regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine development","termid":"GO:0061000"}


id: MOD:01611
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN.","definition_xrefs":["RESID:AA0508","PubMed:17935335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FMN","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-trihydrogen phosphate","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FMN","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FMN","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links)","type":"exact"},{"name":"BINDING FMN (covalent; via 2 links, pros nitrogen)","type":"exact"}],"termid":"MOD:01611"}


