# terms

id: PBO:0038416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within,_negative_effect","termid":"PBO:0038416"}


id: PBO:0057824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3143","termid":"PBO:0057824"}


id: GO:0060343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"trabecula morphogenesis","termid":"GO:0061383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula formation","synonyms":[{"name":"trabecula biogenesis","type":"related"},{"name":"trabeculation","type":"exact"}],"termid":"GO:0060343"}


id: GO:1900570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diorcinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"diorcinol metabolic process","synonyms":[{"name":"diorcinol metabolism","type":"exact"}],"termid":"GO:1900570"}


id: GO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.","definition_xrefs":["ISBN:0333781767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinitrotoluene metabolic process","termid":"GO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene metabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene metabolism","type":"exact"},{"name":"TNT metabolic process","type":"exact"},{"name":"TNT metabolism","type":"exact"}],"termid":"GO:0018974"}


id: PBO:0085944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; nearly identical to Sno3p; expression is induced before the diauxic shift and also in the absence of thiamin","termid":"PBO:0085944"}


id: GO:0034872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-geranyl-CoA = cis-geranyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r1310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"trans-geranyl-CoA isomerase activity","secondary_identifiers":["EC:5.2.1.-"],"termid":"GO:0034872"}


id: PBO:0029472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_acid_phosphatase_activity","termid":"PBO:0029472"}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: GO:0009842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid that contains unstacked, phycobilisome-bearing thylakoid membranes and is surrounded by a double membrane with a peptidoglycan layer in the intermembrane space between the two envelope membranes. Cyanelles are characteristic of algae in the class Glaucophyta, and may represent an ancestral form of plastid.","definition_xrefs":["ISBN:0521316871","ISBN:1402001894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle","synonyms":[{"name":"cyanoplast","type":"exact"},{"name":"muroplast","type":"exact"}],"termid":"GO:0009842"}


id: PBO:0052652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 20","termid":"PBO:0052652"}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_00514","SJAG_02392","SJAG_03581","SJAG_04853","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85585,91428,90187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[97745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0044089
data:
  {"annotated_genes":["SJAG_04509","SJAG_03936","SJAG_01837","SJAG_03342","SJAG_01188","SJAG_01805","SJAG_04776","SJAG_02379","SJAG_00082","SJAG_05290","SJAG_02671","SJAG_04468","SJAG_02990","SJAG_02169","SJAG_01794","SJAG_03453","SJAG_00514","SJAG_01114","SJAG_03704","SJAG_02332","SJAG_03048","SJAG_04597","SJAG_03241","SJAG_04666","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"},{"annotations":[94494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[97833,111822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[89105,83684,106625,85589,86534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"},{"annotations":[100569,76891,108588,88050,110634,102413,89427,101767,85590,112985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[106695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[88051,83326,90025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"},{"annotations":[85200,89122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090070"},{"annotations":[105811,83327,85722,89432,97843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular component biogenesis, a process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cellular component.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cellular component biogenesis","termid":"GO:0044085"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01794":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02379":null,"SJAG_02671":null,"SJAG_02990":null,"SJAG_03048":null,"SJAG_03241":null,"SJAG_03342":null,"SJAG_03453":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular component biogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0044089","terms_by_termid":{"GO:0031031":null,"GO:0031453":null,"GO:0090070":null,"GO:0110161":null,"GO:0140281":null,"GO:1902917":null,"GO:1903024":null,"GO:1905561":null,"GO:1905758":null}}


id: PBO:0075887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2","termid":"PBO:0075887"}


id: FYPO:0001932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to hydroxyurea is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to hydroxyurea","synonyms":[{"name":"abnormal cellular response to HU","type":"exact"},{"name":"abnormal cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0001932"}


id: PBO:0011444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase Mra1","termid":"PBO:0011444"}


id: SO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature ablation whereby the deleted region includes a transcript feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_ablation","termid":"SO:0001879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_ablation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:transcript_ablation","type":"exact"},{"name":"VEP:transcript_ablation","type":"exact"},{"name":"transcript ablation","type":"exact"}],"termid":"SO:0001893"}


id: PBO:0074318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 7","termid":"PBO:0074318"}


id: PBO:0078197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-7 (non-functional)","termid":"PBO:0078197"}


id: PR:Q10414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CWF19-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00248","PANTHER:PTHR12072:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19-like protein mug161 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.09","secondary_identifiers":["UniProtKB:Q10414"],"synonyms":[{"name":"Spom972h-CWF19L1","type":"exact"},{"name":"meiotically up-regulated gene 161 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10414"}


id: PBO:0055662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, muscle differentiation 1","termid":"PBO:0055662"}


id: PBO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression cell cycle regulated","termid":"PBO:0000436"}


id: PR:O94603
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epe1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain-containing histone demethylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.16c","synonyms":[{"name":"Spom972h-epe1","type":"exact"},{"name":"[Histone-H3]-lysine-36 demethylase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heterochromatin-destabilizing protein epe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94603"}


id: PBO:0084159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant transport of the cytotoxic nucleoside analog 5-fluorouridine; not involved in uracil transport; relative distribution to the vacuole increases upon DNA replication stress","termid":"PBO:0084159"}


id: GO:0031951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid catabolic process","termid":"GO:0031949"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"positively_regulates","term_name":"glucocorticoid catabolic process","termid":"GO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid catabolic process","synonyms":[{"name":"activation of glucocorticoid catabolic process","type":"narrow"},{"name":"stimulation of glucocorticoid catabolic process","type":"narrow"},{"name":"up regulation of glucocorticoid catabolic process","type":"exact"},{"name":"up-regulation of glucocorticoid catabolic process","type":"exact"},{"name":"upregulation of glucocorticoid catabolic process","type":"exact"}],"termid":"GO:0031951"}


id: GO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions.","definition_xrefs":["PMID:14531730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"WW domain binding","termid":"GO:0050699"}


id: PBO:0061779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 1","termid":"PBO:0061779"}


id: PBO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: FYPO:0000297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects the organization of the microtubule cytoskeleton. Microtubule cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and associated proteins.","definition_xrefs":["PomBase:mah","GO:0000226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization phenotype","termid":"FYPO:0000295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"microtubule cytoskeleton organization phenotype","synonyms":[{"name":"fission yeast microtubule cytoskeleton organization phenotype","type":"exact"},{"name":"microtubule cytoskeleton organisation phenotype","type":"exact"}],"termid":"FYPO:0000297"}


id: GO:0006868
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63326],"is_not":false,"summary":null,"term":"GO:0006868"}]},"cv_name":"biological_process","definition":"The directed movement of glutamine, 2-amino-4-carbamoylbutanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"glutamine transport","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["GO:0015815"],"synonyms":[{"name":"L-glutamine transport","type":"narrow"}],"termid":"GO:0006868","terms_by_termid":{"GO:0006868":null}}


id: PBO:0069731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1012, pseudogene","termid":"PBO:0069731"}


id: GO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to pigment granules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"pigment granule maturation","termid":"GO:0048757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"endosome to pigment granule transport","termid":"GO:0043485"}


id: GO:0005686
data:
  {"annotated_genes":["SJAG_02279","SJAG_03245","SJAG_01008","SJAG_00147","SJAG_04079","SJAG_05208","SJAG_02469","SJAG_02304","SJAG_02185","SJAG_02843","SJAG_03469","SJAG_00577","SJAG_04318","SJAG_03070","SJAG_01452","SJAG_05240","SJAG_03954","SJAG_03547","SJAG_00539","SJAG_01327","SJAG_03460","SJAG_00498","SJAG_01870","SJAG_01301","SJAG_00322","SJAG_00504","SJAG_01819","SJAG_03210","SJAG_00313"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70586,70771,72208,72552,72999,73544,74699,74992,75102,75251,76075,76381,76574,77945,78761,91405,97214,97868,101726,103240,103868,104819,105364,105908,107888,108114,110128,111027,111564],"is_not":false,"summary":null,"term":"GO:0005686"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U2, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U2 snRNP, most of which remain associated with the U2 snRNA both while the U2 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:mah","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01452":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03245":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_04079":null,"SJAG_04318":null,"SJAG_05208":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2 snRNP","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"17S U2 snRNP","type":"narrow"},{"name":"snRNP U2","type":"exact"}],"termid":"GO:0005686","terms_by_termid":{"GO:0005686":null}}


id: PR:Q9UUH6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC630.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUH6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C630.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.06c","synonyms":[{"name":"Spom972h-SPAC630.06c","type":"exact"}],"termid":"PR:Q9UUH6"}


id: PBO:0028600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_initiation_from_RNA_polymerase_III_promoter","termid":"PBO:0028600"}


id: PBO:0069543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 813, pseudogene","termid":"PBO:0069543"}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: GO:0071383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}


id: PR:O42854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bbc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain-containing protein C23A1.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.17","synonyms":[{"name":"Spom972h-bbc1","type":"exact"}],"termid":"PR:O42854"}


id: GO:0021790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to a repulsive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["PMID:14699587","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemorepulsion of branchiomotor axon","termid":"GO:0021793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemorepulsion of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"negative chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021790"}


id: PBO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 31","termid":"PBO:0060011"}


id: GO:1904360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of spore germination.","definition_xrefs":["PMID:8798577","GOC:TermGenie","GO_REF:0000058","PMID:14718564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"negatively_regulates","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore germination","secondary_identifiers":["GO:0075008"],"synonyms":[{"name":"down regulation of spore germination","type":"exact"},{"name":"down-regulation of spore germination","type":"exact"},{"name":"downregulation of spore germination","type":"exact"},{"name":"inhibition of spore germination","type":"narrow"},{"name":"negative regulation of spore germination on or near host","type":"narrow"}],"termid":"GO:1904360"}


id: GO:2000822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavioral fear response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"regulates","term_name":"behavioral fear response","termid":"GO:0001662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavioral fear response","synonyms":[{"name":"regulation of behavioural fear response","type":"exact"}],"termid":"GO:2000822"}


id: PBO:0075389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp3 transcription factor","termid":"PBO:0075389"}


id: PR:C6Y4C1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pet117, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.25","synonyms":[{"name":"Spom972h-pet117","type":"exact"}],"termid":"PR:C6Y4C1"}


id: PBO:0038801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 7","termid":"PBO:0038801"}


id: PBO:0084077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p)","termid":"PBO:0084077"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: GO:2000319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 cell differentiation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"regulates","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 cell differentiation","synonyms":[{"name":"regulation of T-helper 17 cell development","type":"related"}],"termid":"GO:2000319"}


id: PR:Q9HDU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.14c gene.","definition_xrefs":["UniProtKB:Q9HDU1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein PB2B2.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.14c","synonyms":[{"name":"Spom972h-SPBPB2B2.14c","type":"exact"}],"termid":"PR:Q9HDU1"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: PBO:0087605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; involved in histone acylation; probable pantetheine-phosphate adenylyltransferase (PPAT); PPAT catalyzes the fourth step in the biosynthesis of coenzyme A from pantothenate; null mutant lethality is complemented by E. coli coaD (encoding PPAT) and by human COASY","termid":"PBO:0087605"}


id: PBO:0057210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 377","termid":"PBO:0057210"}


id: GO:0030564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification guide activity","termid":"GO:0030557"},{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tRNA 2'-O-ribose methylation guide activity","termid":"GO:0030564"}


id: PBO:0076184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfatase modifying factor 2","termid":"PBO:0076184"}


id: PBO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Gas1, 1,3-beta-glucanosyltransferase (predicted)","termid":"PBO:0002733"}


id: PBO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036148"}


id: GO:0009503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid membrane complex of chlorophylls a and b together with chlorophyll a-b binding proteins. In addition, LHCs contain a number of other proteins, the function of which is speculative, together with accessory pigments. The LHCs capture and transfer energy to photosystems I and II. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"thylakoid light-harvesting complex","termid":"GO:0009503"}


id: PBO:0068396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 215","termid":"PBO:0068396"}


id: MOD:00866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several dihydroxylated proline residues, such as (2S,3R,4R)-3,4-dihydroxyproline or (2S,3R,4S)-3,4-dihydroxyproline.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated proline","synonyms":[{"name":"Hy2Pro","type":"exact"}],"termid":"MOD:00866"}


id: SO:1000181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variant_effect that changes the gene structure by causing a fusion to another gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000181 sequence_variant_causing_gene_fusion (obsolete SO:1000181)","synonyms":[{"name":"mutation causing gene fusion","type":"related"},{"name":"sequence variant causing gene fusion","type":"exact"}],"termid":"SO:1000181"}


id: PBO:0058544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6090","termid":"PBO:0058544"}


id: PBO:0046825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3 pseudogene 2","termid":"PBO:0046825"}


id: PBO:0051868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL LIM homeobox 1","termid":"PBO:0051868"}


id: PBO:0084708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane ATP-binding cassette (ABC) transporter; exports mitochondrially synthesized precursors of iron-sulfur (Fe/S) clusters to the cytosol; human homolog ABCB7 can complement yeast null mutant","termid":"PBO:0084708"}


id: PBO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1B","termid":"PBO:0052341"}


id: GO:1905008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:7499219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of L-lysine import across plasma membrane","secondary_identifiers":["GO:0010805"],"synonyms":[{"name":"regulation of L-lysine import into cell","type":"exact"},{"name":"regulation of lysine import","type":"broad"},{"name":"regulation of lysine uptake","type":"exact"}],"termid":"GO:1905008"}


id: GO:0098753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes with covalently attached hydrophobic anchors products that penetrate only the cytoplasmic side of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of the cytoplasmic side of the plasma membrane (obsolete GO:0098753)","termid":"GO:0098753"}


id: PBO:0041500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 71B, pseudogene","termid":"PBO:0041500"}


id: GO:0019048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus effects a change in the structure or processes of its host organism.","definition_xrefs":["UniProtKB-KW:KW-0945","GOC:bf","ISBN:0781718325","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by virus of host process","secondary_identifiers":["GO:0044661","GO:0044792","VZ:886"],"synonyms":[{"name":"disruption by virus of host cell","type":"related"},{"name":"host-virus interaction","type":"exact"},{"name":"modulation by virus of host anatomical structure or process","type":"related"},{"name":"modulation by virus of host anatomy or process","type":"exact"},{"name":"modulation by virus of host morphology or physiology","type":"related"},{"name":"viral interaction with host","type":"exact"},{"name":"viral-host process","type":"exact"},{"name":"virus-host interaction","type":"broad"},{"name":"virus-host process","type":"exact"}],"termid":"GO:0019048"}


id: GO:1902340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromosome condensation.","definition_xrefs":["PMID:23219725","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"chromosome condensation","termid":"GO:0030261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromosome condensation","synonyms":[{"name":"down regulation of chromosome condensation","type":"exact"},{"name":"down regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"down regulation of nuclear chromosome condensation","type":"exact"},{"name":"down-regulation of chromosome condensation","type":"exact"},{"name":"down-regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"down-regulation of nuclear chromosome condensation","type":"exact"},{"name":"downregulation of chromosome condensation","type":"exact"},{"name":"downregulation of eukaryotic chromosome condensation","type":"exact"},{"name":"downregulation of nuclear chromosome condensation","type":"exact"},{"name":"inhibition of chromosome condensation","type":"narrow"},{"name":"inhibition of eukaryotic chromosome condensation","type":"narrow"},{"name":"inhibition of nuclear chromosome condensation","type":"narrow"},{"name":"negative regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"negative regulation of nuclear chromosome condensation","type":"exact"}],"termid":"GO:1902340"}


id: PR:O14044
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein PNO1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01774","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein pno1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.11c","secondary_identifiers":["UniProtKB:O14044"],"synonyms":[{"name":"Spom972h-PNO1","type":"exact"},{"name":"ribosomal RNA-processing protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14044"}


id: GO:0009097
data:
  {"annotated_genes":["SJAG_06635","SJAG_04149","SJAG_03985","SJAG_04098","SJAG_00396","SJAG_00234","SJAG_00107","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75556,76125,76682,86383,98722,103652,105723,110938],"is_not":false,"summary":null,"term":"GO:0009097"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid biosynthetic process","termid":"GO:0009082"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isoleucine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:ILEUSYN-PWY"],"synonyms":[{"name":"isoleucine anabolism","type":"exact"},{"name":"isoleucine biosynthesis","type":"exact"},{"name":"isoleucine formation","type":"exact"},{"name":"isoleucine synthesis","type":"exact"}],"termid":"GO:0009097","terms_by_termid":{"GO:0009097":null}}


id: PBO:0040660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","termid":"PBO:0040660"}


id: GO:0015387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + H+(out) = K+(in) + H+(in).","definition_xrefs":["TC:2.A.38.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium:proton symporter activity","secondary_identifiers":["RHEA:28490"],"synonyms":[{"name":"potassium:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015387"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: PBO:0041855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3","termid":"PBO:0041855"}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: PBO:0077316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52","termid":"PBO:0077316"}


id: PBO:0058375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4747","termid":"PBO:0058375"}


id: PBO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7","termid":"PBO:0044383"}


id: PBO:0011480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAi protein, Dsh1","termid":"PBO:0011480"}


id: PBO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L28 (predicted)","termid":"PBO:0001662"}


id: FYPO:0005915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the portion of ribosomal DNA encoding 5S rRNA. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:25798942","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased nucleosome occupancy at 5S rRNA genes","synonyms":[{"name":"decreased nucleosome occupancy at 5S rRNA genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at 5S rRNA genes during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in 5S rRNA genes","type":"exact"},{"name":"reduced nucleosome occupancy at 5S rRNA genes","type":"exact"}],"termid":"FYPO:0005915"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: PBO:0050062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLCS intronic transcript 1","termid":"PBO:0050062"}


id: PBO:0062971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 3","termid":"PBO:0062971"}


id: FYPO:0001632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular tyrosine level","termid":"FYPO:0001641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal vacuolar tyrosine level","synonyms":[{"name":"normal level of tyrosine in vacuole","type":"exact"},{"name":"normal vacuolar L-tyrosine level","type":"exact"},{"name":"normal vacuolar tyrosine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar tyrosine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001632"}


id: PBO:0078229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-4","termid":"PBO:0078229"}


id: PBO:0074923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91B","termid":"PBO:0074923"}


id: PBO:0060615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1B pseudogene","termid":"PBO:0060615"}


id: PBO:0060181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 2, oligomeric mucus/gel-forming","termid":"PBO:0060181"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: PBO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Bzz1","termid":"PBO:0090719"}


id: PBO:0065250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20C","termid":"PBO:0065250"}


id: GO:0102710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-alpha-D-glucosamine + 1D-myo-inositol 3-phosphate = 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside 3-phosphate + UDP + H+.","definition_xrefs":["RHEA:26188","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"D-inositol-3-phosphate glycosyltransferase activity","secondary_identifiers":["EC:2.4.1.250","MetaCyc:RXN-6501"],"termid":"GO:0102710"}


id: PBO:0062366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 1 pseudogene","termid":"PBO:0062366"}


id: PBO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+/calmodulin-dependent (CaMMK)-like protein kinase Ssp1","termid":"PBO:0016116"}


id: PBO:0081809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 2, Y-linked","termid":"PBO:0081809"}


id: GO:0030733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a fatty acid = S-adenosyl-L-homocysteine + a fatty acid methyl ester.","definition_xrefs":["EC:2.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"fatty acid O-methyltransferase activity","secondary_identifiers":["MetaCyc:FATTY-ACID-O-METHYLTRANSFERASE-RXN","RHEA:23012"],"synonyms":[{"name":"S-adenosyl-L-methionine:fatty-acid O-methyltransferase activity","type":"related"},{"name":"fatty acid methyltransferase activity","type":"related"},{"name":"fatty-acid O-methyltransferase activity","type":"exact"}],"termid":"GO:0030733"}


id: PBO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O","termid":"PBO:0090185"}


id: PBO:0090726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L24","termid":"PBO:0090726"}


id: PBO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, E","termid":"PBO:0050042"}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_01028","SJAG_00424","SJAG_02278","SJAG_00610","SJAG_04666","SJAG_04184","SJAG_02916","SJAG_04236","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71595,72934,70810,73117,77596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[85177,90529,88058,98292],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0058046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4267","termid":"PBO:0058046"}


id: FYPO:0005212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during prometaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during mitosis","termid":"FYPO:0005779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to kinetochore during mitotic prometaphase","synonyms":[{"name":"normal protein localisation to kinetochore during mitotic prometaphase","type":"exact"},{"name":"normal protein localization to kinetochore during prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0005212"}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: GO:0047979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexose + O2 = aldono-1,5-lactone + H202.","definition_xrefs":["EC:1.1.3.5","MetaCyc:HEXOSE-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hexose oxidase activity","synonyms":[{"name":"D-hexose:oxygen 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047979"}


id: GO:0042810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"pheromone metabolic process","synonyms":[{"name":"pheromone metabolism","type":"exact"}],"termid":"GO:0042810"}


id: PBO:0051020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGFBP5 antisense RNA 1","termid":"PBO:0051020"}


id: GO:0042884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of microcin, a class of glycine-rich, bactericidal peptides (antibiotics) produced by some enteric bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11292337","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"microcin transport","termid":"GO:0042884"}


id: PBO:0081841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF775 antisense RNA 1","termid":"PBO:0081841"}


id: GO:0070113
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, of the two lipid bilayers surrounding an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar chromatophore membrane","termid":"GO:0070112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore inner membrane","synonyms":[{"name":"Paulinella-type chromatophore inner membrane","type":"exact"}],"termid":"GO:0070113"}


id: GO:0010457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the two centrioles within a centrosome remain tightly paired.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"centriole-centriole cohesion","termid":"GO:0010457"}


id: GO:0010306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnogalacturonan II, a low molecular mass (5 - 10KDa) pectic polysaccharide, conserved in the primary walls of dicotyledenous and monocotyledenous plants and gymnosperms.","definition_xrefs":["PMID:12754267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan II metabolic process","termid":"GO:0010396"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"rhamnogalacturonan II biosynthetic process","termid":"GO:0010306"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: PBO:0028650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_precursor_level","termid":"PBO:0028650"}


id: PBO:0066954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 256","termid":"PBO:0066954"}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: MOD:02038
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-histidine residue with one methyl group.","definition_xrefs":["Unimod:34#H","DeltaMass:215","OMSSA:77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated histidine","termid":"MOD:00661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monomethylated L-histidine","synonyms":[{"name":"MOD_RES Methylhistidine","type":"exact"},{"name":"Me1His","type":"exact"},{"name":"Methyl","type":"related"},{"name":"methylh","type":"exact"}],"termid":"MOD:02038"}


id: FYPO:0000799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide. Cells stop growing (and may die) at a concentration of diamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to diamide","synonyms":[{"name":"hypersensitive to diamide","type":"exact"},{"name":"sensitive to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"sensitive to diamide during mitotic cell cycle","type":"related"},{"name":"sensitive to diamide during vegetative growth","type":"exact"}],"termid":"FYPO:0000799"}


id: SO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Similarity due to common ancestry.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous","termid":"SO:0000857"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: GO:0061066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nematode larval development","termid":"GO:0061063"},{"relation_name":"is_a","term_name":"regulation of dauer larval development","termid":"GO:0061065"},{"relation_name":"positively_regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer larval development","termid":"GO:0061066"}


id: MOD:01197
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-heptosyl-L-glutamine.","definition_xrefs":["Unimod:490#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-heptosyl-L-glutamine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01197"}


id: PR:O42862
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.02","synonyms":[{"name":"Spom972h-atg14","type":"exact"}],"termid":"PR:O42862"}


id: GO:0061475
data:
  {"annotated_genes":["SJAG_00443"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100084],"is_not":false,"summary":null,"term":"GO:0061475"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00443":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061475","terms_by_termid":{"GO:0061475":null}}


id: PBO:0055577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3013","termid":"PBO:0055577"}


id: GO:0140809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H4 L-arginyl (position 3)= histone H4 L-citrullyl (position 3) + NH4+, resulting in histone H4 citrullination at position 3.","definition_xrefs":["PMID:16567635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone arginine deiminase activity","termid":"GO:0140794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H4R3 arginine deiminase activity","synonyms":[{"name":"H4-R3 citrullination","type":"exact"},{"name":"histone H4-R3 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H4-R3 specific)","type":"exact"}],"termid":"GO:0140809"}


id: PATO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity quality inhering in a bearer by virtue of the bearer's exposure to radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity to irradiation","termid":"PATO:0001806"}


id: PR:O74424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup211 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.08c","synonyms":[{"name":"Spom972h-nup211","type":"exact"},{"name":"nuclear pore protein nup211 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74424"}


id: PBO:0039169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP1 divergent transcript","termid":"PBO:0039169"}


id: PBO:0052254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDEL endoplasmic reticulum protein retention receptor 1","termid":"PBO:0052254"}


id: PBO:0041057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 8","termid":"PBO:0041057"}


id: PBO:0051423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-34 (pseudogene)","termid":"PBO:0051423"}


id: PR:O14286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-binding cassette sub-family B member 7, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24221:SF68","PRO:DNx","OMA:SCHPO01534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur clusters transporter atm1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.01","secondary_identifiers":["UniProtKB:O14286"],"synonyms":[{"name":"Spom972h-ABCB7","type":"exact"}],"termid":"PR:O14286"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: SO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_cis_hydroxyisopentenyl_adenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_cis_hydroxyisopentenyl_adenosine","secondary_identifiers":["RNAMOD:008"],"synonyms":[{"name":"N6 cis hydroxyisopentenyl adenosine","type":"exact"},{"name":"N6-(cis-hydroxyisopentenyl)adenosine","type":"exact"},{"name":"io6A","type":"exact"}],"termid":"SO:0001302"}


id: GO:0016725
data:
  {"annotated_genes":["SJAG_02948","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102625,88073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:1.17.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, other acceptors","type":"narrow"}],"termid":"GO:0016725","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: SO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone methylation.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_histone_modification","termid":"SO:0001221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_methylation","synonyms":[{"name":"silenced by histone methylation","type":"exact"}],"termid":"SO:0001222"}


id: PBO:0056814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 6 like","termid":"PBO:0056814"}


id: PBO:0057676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1267","termid":"PBO:0057676"}


id: GO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin.","definition_xrefs":["InterPro:IPR009071","PMID:18445004","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"HMG box domain binding","termid":"GO:0071837"}


id: GO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075164)","synonyms":[{"name":"negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075164"}


id: PBO:0079910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRFS1 divergent transcript","termid":"PBO:0079910"}


id: PBO:0075146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 2","termid":"PBO:0075146"}


id: PBO:0088562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase DHRS3 family, implicated in lipid (isoprenoid) metabolism","termid":"PBO:0088562"}


id: PBO:0083649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endo-beta-1,3-glucanase; major protein of the cell wall, involved in cell wall maintenance; involved in incorporation of newly synthesized mannoprotein molecules into the cell wall","termid":"PBO:0083649"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: GO:0034652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which extrachromosomal circular DNA molecules are transported to, or maintained in, a specific location in cells contributing to their aging.","definition_xrefs":["PMID:18660802","GOC:dph","GOC:jp","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA localization involved in cell aging (obsolete GO:0034652)","synonyms":[{"name":"extrachromosomal circular DNA localisation involved in cell aging","type":"exact"},{"name":"extrachromosomal circular DNA localization during cell ageing","type":"exact"},{"name":"extrachromosomal circular DNA localization during cell aging","type":"related"}],"termid":"GO:0034652"}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_01581","SJAG_03789","SJAG_02374","SJAG_02275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71475,87352,90548,99548],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


id: MOD:01129
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'phos dAdenosyl","termid":"MOD:01129"}


id: GO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NADPH + H+ + O2 = protocatechuate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBENZOATE-3-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0109"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate monooxygenase activity","type":"related"},{"name":"4-hydroxybenzoate,NADPH:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"p-hydroxybenzoate hydrolyase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoate-3-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydrolase activity","type":"related"},{"name":"p-hydroxybenzoic acid hydroxylase activity","type":"broad"},{"name":"p-hydroxybenzoic hydroxylase activity","type":"related"},{"name":"para-hydroxybenzoate hydroxylase activity","type":"broad"}],"termid":"GO:0018659"}


id: PBO:0062985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated","termid":"PBO:0062985"}


id: GO:0004703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + G protein-coupled receptor = ADP + G protein-coupled receptor phosphate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0140096","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor kinase activity","secondary_identifiers":["RHEA:12008","GO:0004678","EC:2.7.11.16"],"synonyms":[{"name":"ATP:G-protein-coupled receptor phosphotransferase activity","type":"related"},{"name":"G protein coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"G-protein coupled receptor kinase activity","type":"related"},{"name":"G-protein-coupled receptor phosphorylating protein kinase activity","type":"exact"},{"name":"GPCR kinase activity","type":"related"},{"name":"GPCR phosphorylating protein kinase activity","type":"exact"},{"name":"GPCRK","type":"related"},{"name":"GRK4","type":"related"},{"name":"GRK5","type":"related"},{"name":"GRK6","type":"related"},{"name":"STK16","type":"related"}],"termid":"GO:0004703"}


id: PBO:0079832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin like 1","termid":"PBO:0079832"}


id: PBO:0062264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 1","termid":"PBO:0062264"}


id: GO:0005606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-1 complex","synonyms":[{"name":"laminin-111 complex","type":"exact"}],"termid":"GO:0005606"}


id: GO:0015304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) = glucose(in).","definition_xrefs":["TC:2.A.1.1.4","TC:2.A.1.1.6","TC:2.A.1.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucose uniporter activity","synonyms":[{"name":"galactose, glucose uniporter activity","type":"narrow"}],"termid":"GO:0015304"}


id: GO:1904483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to synthetic cannabinoid.","definition_xrefs":["GOC:TermGenie","GO_REF:0000067","GOC:mr","PMID:10700562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"synthetic cannabinoid binding","termid":"GO:1904483"}


id: GO:0045841
data:
  {"annotated_genes":["SJAG_02336","SJAG_04999","SJAG_04259","SJAG_01679","SJAG_01330","SJAG_02169","SJAG_03681","SJAG_01082","SJAG_02451","SJAG_00883","SJAG_03126","SJAG_04884","SJAG_04126","SJAG_01297","SJAG_04699","SJAG_01837","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102596,95085,99329,109006,109480,103591,86421,107214,111061],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[97268,94947,101699,105215,109709,110714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[89811],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[111823],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"negative regulation of mitotic nuclear division","termid":"GO:0045839"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of mitotic metaphase/anaphase transition","type":"narrow"}],"termid":"GO:0045841","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: FYPO:0006204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dCTP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular dCTP level","synonyms":[{"name":"normal cellular dCTP level during mitotic cell cycle","type":"related"},{"name":"normal cellular dCTP level during vegetative growth","type":"exact"},{"name":"normal dCTP accumulation","type":"related"}],"termid":"FYPO:0006204"}


id: PBO:0054051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1393","termid":"PBO:0054051"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: PBO:0045797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 1","termid":"PBO:0045797"}


id: PBO:0072109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 7","termid":"PBO:0072109"}


id: PBO:0071942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 19","termid":"PBO:0071942"}


id: GO:0060586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chemical homeostatic process involved in the maintenance of a steady state level of iron within extracellular body fluids, such as blood, xylem or phloem, of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.","definition_xrefs":["PMID:31431773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"},{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"multicellular organismal-level iron ion homeostasis","synonyms":[{"name":"multicellular organismal iron ion homeostasis","type":"exact"}],"termid":"GO:0060586"}


id: GO:0045842
data:
  {"annotated_genes":["SJAG_04968","SJAG_00883","SJAG_02380","SJAG_02498","SJAG_03048","SJAG_02336","SJAG_01805","SJAG_03126","SJAG_04573","SJAG_01297","SJAG_00666","SJAG_03681","SJAG_01679","SJAG_02451","SJAG_03353","SJAG_04259","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89428,93246,95629,97568,97838,106635,109966],"is_not":false,"summary":null,"term":"GO:0045842"},{"annotations":[95085,102596,86421,99329,109006,103591,107214,109480,111061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"positive regulation of mitotic nuclear division","termid":"GO:0045840"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle phase transition","termid":"GO:1901992"},{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902101"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"stimulation of mitotic metaphase/anaphase transition","type":"narrow"},{"name":"up regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"up-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"upregulation of mitotic metaphase/anaphase transition","type":"exact"}],"termid":"GO:0045842","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0066664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 1","termid":"PBO:0066664"}


id: PBO:0046936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member B","termid":"PBO:0046936"}


id: PBO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 2","termid":"PBO:0040026"}


id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["GO_REF:0000021","GOC:cls","PMID:15157725","PMID:12593981","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: GO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with granulocyte macrophage colony-stimulating factor (GM-CSF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor activity","secondary_identifiers":["GO:0030525"],"synonyms":[{"name":"CSF-2 receptor activity","type":"exact"},{"name":"CSF2R","type":"related"},{"name":"GM-CSF receptor activity","type":"exact"},{"name":"GMC-SF receptor activity","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0004901"}


id: GO:0003067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hormones modulate the force with which blood passes through the circulatory system contributing to different values of blood pressure oscillating with a regularity of approximately 24 hours. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"},{"relation_name":"part_of","term_name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure by hormone","termid":"GO:0003067"}


id: GO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed by Baculoviruses. A vesicular structure in which virions are assembled.","definition_xrefs":["PMID:13358757","PMID:1433508","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virogenic stroma","synonyms":[{"name":"VS","type":"exact"}],"termid":"GO:0039720"}


id: FYPO:0003719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tributyltin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on tributyltin","synonyms":[{"name":"normal cell population growth in presence of tributyltin","type":"exact"},{"name":"normal cell population growth on tributylstannane","type":"exact"},{"name":"normal cell population growth on tributyltin","type":"exact"},{"name":"normal cellular response to tributyltin","type":"related"},{"name":"normal vegetative cell population growth on tributyltin","type":"exact"}],"termid":"FYPO:0003719"}


id: PBO:0075200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 12","termid":"PBO:0075200"}


id: PBO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lipid_particle_organization","termid":"PBO:0031036"}


id: GO:0046215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore metabolic process","termid":"GO:0009237"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"siderophore catabolic process","synonyms":[{"name":"siderochrome catabolism","type":"narrow"},{"name":"siderophore breakdown","type":"exact"},{"name":"siderophore catabolism","type":"exact"},{"name":"siderophore degradation","type":"exact"}],"termid":"GO:0046215"}


id: PBO:0085847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; msc7 mutants are defective in directing meiotic recombination events to homologous chromatids","termid":"PBO:0085847"}


id: PBO:0046099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 2","termid":"PBO:0046099"}


id: PBO:0057243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 448","termid":"PBO:0057243"}


id: GO:0065009
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088","SJAG_01150"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90876,100540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"},{"annotations":[112122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043388"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01150":null,"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of a molecular function","type":"exact"}],"termid":"GO:0065009","terms_by_termid":{"GO:0043388":null,"GO:1904530":null}}


id: PBO:0030690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_pheromone","termid":"PBO:0030690"}


id: PBO:0084406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidic acid acyltransferase; responsible for enhanced phospholipid synthesis during organic solvent stress; null displays increased sensitivity to Calcofluor white; highly expressed during organic solvent stress; ICT1 has a paralog, ECM18, that arose from the whole genome duplication; human ABHD5 can complement ict1 null mutant","termid":"PBO:0084406"}


id: PBO:0068737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 8, pseudogene","termid":"PBO:0068737"}


id: GO:0047946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + L-glutamine = CoA + N-acyl-L-glutamine.","definition_xrefs":["MetaCyc:GLUTAMINE-N-ACYLTRANSFERASE-RXN","EC:2.3.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glutamine N-acyltransferase activity","secondary_identifiers":["RHEA:18469"],"synonyms":[{"name":"acyl-CoA:L-glutamine N-acyltransferase activity","type":"related"}],"termid":"GO:0047946"}


id: GO:0036159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein inner arm, an inner arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:vk","PMID:19944400","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0065003","GO:0044085","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"inner dynein arm assembly","synonyms":[{"name":"IDA assembly","type":"exact"}],"termid":"GO:0036159"}


id: GO:0007002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete centromere binding (obsolete GO:0007002)","synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0007002"}


id: PBO:0041731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 2","termid":"PBO:0041731"}


id: FYPO:0001425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of mitotic DNA replication is abnormal, resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"has_output","term_name":"DNA content increased during vegetative growth","termid":"FYPO:0000158"},{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation","termid":"FYPO:0000216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete re-replication","type":"exact"},{"name":"complete mitotic DNA re-replication","type":"related"},{"name":"complete mitotic DNA rereplication","type":"related"},{"name":"endoreduplication","type":"related"},{"name":"endoreplication","type":"related"},{"name":"increased spontaneous diploidization","type":"related"}],"termid":"FYPO:0001425"}


id: PBO:0053772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1017","termid":"PBO:0053772"}


id: GO:2000828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of parathyroid hormone secretion","synonyms":[{"name":"regulation of PTH secretion","type":"exact"},{"name":"regulation of parathormone secretion","type":"exact"},{"name":"regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000828"}


id: GO:2000083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"regulation of L-ascorbic acid biosynthetic process","termid":"GO:2000082"},{"relation_name":"negatively_regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"negative regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"negative regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"negative regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"negative regulation of L-ascorbic acid formation","type":"exact"},{"name":"negative regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthetic process","type":"exact"},{"name":"negative regulation of vitamin C biosynthesis","type":"exact"},{"name":"negative regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000083"}


id: PBO:0069611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 888, pseudogene","termid":"PBO:0069611"}


id: PR:Q9UTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine-5'-phosphate oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10851:SF0","PRO:DNx","OMA:SCHPO01911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.02","secondary_identifiers":["UniProtKB:Q9UTQ1"],"synonyms":[{"name":"PNP/PMP oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PNPOx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNPO","type":"exact"}],"termid":"PR:Q9UTQ1"}


id: FYPO:0008126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally found only in the cytoplasm  is observed in the nucleoplasm during mitotic M-phase.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"cytoplasmic protein mislocalized to nucleoplasm during mitotic M-phase","termid":"FYPO:0008126"}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: PBO:0048618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gypsy retrotransposon integrase 1","termid":"PBO:0048618"}


id: PBO:0050028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 1","termid":"PBO:0050028"}


id: FYPO:0002255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"enlarged nucleus","synonyms":[{"name":"enlarged nuclei","type":"exact"}],"termid":"FYPO:0002255"}


id: GO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfate assimilation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter (obsolete GO:0100053)","termid":"GO:0100053"}


id: MOD:00577
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:7744761","Unimod:254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:00577"}


id: PBO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase","termid":"PBO:0045047"}


id: CHEBI:24431
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A chemical entity is a physical entity of interest in chemistry including molecular entities, parts thereof, and chemical substances.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical entity","termid":"CHEBI:24431"}


id: PATO:0000555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000555 heat sensitive (obsolete PATO:0000555)","termid":"PATO:0000555"}


id: GO:0036504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of two lipid bilayers that surround the Golgi apparatus to form a single Golgi membrane.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:12473691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"part_of","term_name":"Golgi reassembly","termid":"GO:0090168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"Golgi membrane fusion","synonyms":[{"name":"Golgi apparatus membrane fusion","type":"exact"},{"name":"membrane fusion involved in Golgi reassembly","type":"exact"},{"name":"post-mitotic fusion of Golgi membranes","type":"exact"}],"termid":"GO:0036504"}


id: PBO:0078017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 7","termid":"PBO:0078017"}


id: PR:000027520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase spindle elongation protein 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase spindle elongation protein 1","termid":"PR:000027517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ase1/UnMod","pombase_gene_id":"SPAPB1A10.09","synonyms":[{"name":"Spom-ase1/UnMod","type":"exact"},{"name":"ase1/UnMod","type":"exact"}],"termid":"PR:000027520"}


id: PBO:0109455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1341, pseudogene","termid":"PBO:0109455"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PBO:0055581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3017","termid":"PBO:0055581"}


id: PATO:0000655
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000655 amphetamine value (obsolete PATO:0000655)","termid":"PATO:0000655"}


id: PBO:0056484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 1","termid":"PBO:0056484"}


id: PBO:0055363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2792","termid":"PBO:0055363"}


id: PBO:0059045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS22 like, DNA repair protein","termid":"PBO:0059045"}


id: PBO:0052064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6A","termid":"PBO:0052064"}


id: PATO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical object that has been constantly realizing some of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active","termid":"PATO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutively active","termid":"PATO:0002356"}


id: PR:O59732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh4 gene.","definition_xrefs":["UniProtKB:O59732","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.12c","synonyms":[{"name":"Chs four homolog 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh4","type":"exact"}],"termid":"PR:O59732"}


id: PR:O13666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg32 gene.","definition_xrefs":["UniProtKB:O13666","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(7)-sterol 5(6)-desaturase erg32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.03c","synonyms":[{"name":"C-5 sterol desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg32","type":"exact"},{"name":"ergosterol Delta(5,6) desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sterol-C5-desaturase erg32 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13666"}


id: GO:2000346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"negatively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte proliferation","termid":"GO:2000346"}


id: PBO:0054574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1976","termid":"PBO:0054574"}


id: GO:0055013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac muscle cell over time, from its formation to the mature state.","definition_xrefs":["GOC:devbiol","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell development","secondary_identifiers":["GO:0048739"],"synonyms":[{"name":"cardiac muscle fiber development","type":"exact"},{"name":"cardiac muscle fibre development","type":"exact"},{"name":"cardiomyocyte cell development","type":"exact"},{"name":"heart muscle cell development","type":"exact"},{"name":"heart muscle fiber development","type":"related"}],"termid":"GO:0055013"}


id: PBO:0045680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1","termid":"PBO:0045680"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:dph","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: GO:0019676
data:
  {"annotated_genes":["SJAG_00359","SJAG_04054","SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72060,89881,112837],"is_not":false,"summary":null,"term":"GO:0019676"}]},"cv_name":"biological_process","definition":"The pathway by which ammonia is processed and incorporated into a cell. In an energy-rich (glucose-containing), nitrogen-poor environment, glutamine synthetase and glutamate synthase form an ammonia assimilatory cycle, in which ammonia is incorporated into L-glutamate to form L-glutamine, which then combines with alpha-ketoglutarate to regenerate L-glutamate. This ATP-dependent cycle is essential for nitrogen-limited growth and for steady-state growth with some sources of nitrogen.","definition_xrefs":["MetaCyc:AMMASSIM-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"ammonia assimilation cycle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PWY-3282"],"synonyms":[{"name":"glutamate metabolic process via glutamine and ammonia","type":"exact"},{"name":"glutamate metabolism via glutamine and ammonia","type":"exact"}],"termid":"GO:0019676","terms_by_termid":{"GO:0019676":null}}


id: PBO:0064412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6E","termid":"PBO:0064412"}


id: GO:0033838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavonol-3-O-glucoside glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.239-RXN","RHEA:18893"],"synonyms":[{"name":"UDP-glucose:flavonol-3-O-glucoside 2''-O-beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033838"}


id: PBO:0040659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 4","termid":"PBO:0040659"}


id: PBO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese superoxide dismutase (predicted)","termid":"PBO:0001922"}


id: PBO:0082468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calmodulin; Ca2+ binding protein that regulates Ca2+ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca2+ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin; binds to the Hog1p MAPK in response to hyperosmotic stress; potentiates membrane tubulation and constriction mediated by the Rvs161p-Rvs167p complex; human CALM1 or CALM2 functionally complement repression induced inviability","termid":"PBO:0082468"}


id: PBO:0054254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1638","termid":"PBO:0054254"}


id: MOD:01272
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9750125","Unimod:89#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iminobiotinyl modified residue","termid":"MOD:00467"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iminobiotinylation - site K","synonyms":[{"name":"Iminobiotin","type":"related"},{"name":"Iminobiotinylation","type":"related"}],"termid":"MOD:01272"}


id: PBO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_target_sequence_feature_(obsolete_requires_target_sequence_feature)","termid":"PBO:0034403"}


id: PBO:0079952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 5","termid":"PBO:0079952"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: PBO:0085915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may play a role in cell wall biosynthesis, mutants have abormal relative levels of mannose and glucose and have Gap1p sorting and transport defects; (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0085915"}


id: PBO:0091858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1","termid":"PBO:0091858"}


id: GO:0090356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"negatively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auxin metabolic process","synonyms":[{"name":"negative regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090356"}


id: GO:0033997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose-beta-D-fructofuranose 1,2':1,2'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,1'-dianhydride (DFA I) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-I-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.17-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,1'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':1',2-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':1',2-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-I-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2',1-dianhydride-forming) activity","type":"related"}],"termid":"GO:0033997"}


id: GO:0006869
data:
  {"annotated_genes":["SJAG_03690","SJAG_01225","SJAG_03741","SJAG_05268","SJAG_16459","SJAG_02323","SJAG_00587","SJAG_03774","SJAG_02581","SJAG_02132","SJAG_00669","SJAG_06440","SJAG_01407","SJAG_05209","SJAG_04370","SJAG_03721","SJAG_01731","SJAG_00355","SJAG_03710","SJAG_01229","SJAG_00589","SJAG_02957","SJAG_02516","SJAG_02943","SJAG_02375","SJAG_01305","SJAG_03851","SJAG_03718","SJAG_00018","SJAG_01470","SJAG_01095","SJAG_02114","SJAG_01722","SJAG_00576","SJAG_03050","SJAG_03746","SJAG_02897","SJAG_03172","SJAG_00230","SJAG_03416","SJAG_01945","SJAG_01590","SJAG_03338","SJAG_01329","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[73094,112625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[76239,90033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[57145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120009"},{"annotations":[84970,93039,101233,86590,93099,103982,102882,104844,94163,103013,96007,99480,102112,111407,96768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[101711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[71966,97150,76046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[86226,86222,97675,74077,96770,86225,86228,94976,72706,86224,86220,86221,100472,74346,86223,86227,97795,104828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[72938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[103546,89856,106589,98055,104686,111388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0006869","terms_by_termid":{"GO:0015918":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140331":null}}


id: GO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a protein by cis-trans isomerization of a proline residue.","definition_xrefs":["PMID:16959570","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein peptidyl-prolyl isomerization","synonyms":[{"name":"protein proline isomerization","type":"exact"}],"termid":"GO:0000413"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: GO:0046330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stress-activated MAPK cascade","termid":"GO:0032874"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"positively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of JNK cascade","synonyms":[{"name":"activation of JNK cascade","type":"narrow"},{"name":"stimulation of JNK cascade","type":"narrow"},{"name":"up regulation of JNK cascade","type":"exact"},{"name":"up-regulation of JNK cascade","type":"exact"},{"name":"upregulation of JNK cascade","type":"exact"}],"termid":"GO:0046330"}


id: GO:0004571
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67013,91298],"is_not":false,"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide.","definition_xrefs":["GOC:bf","PMID:25092655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-oligosaccharide mannosidase activity","termid":"GO:0015924"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782685","KEGG_REACTION:R06722","Reactome:R-HSA-9036012","MetaCyc:RXN-18911","Reactome:R-HSA-901024","EC:3.2.1.113","KEGG_REACTION:R05982","Reactome:R-HSA-9036011","Reactome:R-HSA-4793949","Reactome:R-HSA-964825","Reactome:R-HSA-901039","Reactome:R-HSA-901074","Reactome:R-HSA-901036","Reactome:R-HSA-9036008","Reactome:R-HSA-9696807","Reactome:R-HSA-964737","Reactome:R-HSA-964830","MetaCyc:RXN-18910"],"synonyms":[{"name":"1,2-alpha-mannosidase","type":"related"},{"name":"1,2-alpha-mannosyl-oligosaccharide alpha-D-mannohydrolase activity","type":"related"},{"name":"Man9-mannosidase activity","type":"narrow"},{"name":"ManI activity","type":"narrow"},{"name":"exo-alpha-1,2-mannanase activity","type":"related"},{"name":"glycoprotein processing mannosidase I","type":"related"},{"name":"mannose-9 processing alpha-mannosidase activity","type":"narrow"},{"name":"mannosidase 1A activity","type":"narrow"},{"name":"mannosidase 1B activity","type":"narrow"},{"name":"mannosidase I","type":"related"}],"termid":"GO:0004571","terms_by_termid":{"GO:0004571":null}}


id: PBO:0088183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcription factor that regulates respiratory growth; binds to promoters of genes involved in respiration, gluconeogenesis, and the glyoxylate shunt; required for normal carbon source utilization and adaptation to pH, osmotic and ethanol stress especially during non-fermentative metabolism","termid":"PBO:0088183"}


id: PBO:0083599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex","termid":"PBO:0083599"}


id: PBO:0005680
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during stationary phase","termid":"PBO:0005680"}


id: PBO:0029384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029384"}


id: FYPO:0001262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal, during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete stubby cell during cellular hyperosmotic response (obsolete FYPO:0001262)","synonyms":[{"name":"stubby cell during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"stubby cell during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"watermelon-shaped cell during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001262"}


id: GO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell differentiation","synonyms":[{"name":"regulation of T-helper 2 cell development","type":"related"}],"termid":"GO:0045628"}


id: PBO:0044162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 pseudogene 2","termid":"PBO:0044162"}


id: PBO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1101, mitochondrial ribosomal protein Rsm22 (predicted)","termid":"PBO:0000876"}


id: GO:0031686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A1 adenosine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"A1 adenosine receptor binding","synonyms":[{"name":"A1 adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031686"}


id: PBO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pseudohyphal_growth","termid":"PBO:0031661"}


id: GO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type VII secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VII secretion system (obsolete GO:0085013)","termid":"GO:0085013"}


id: PBO:0068890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 131, pseudogene","termid":"PBO:0068890"}


id: PBO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13 (predicted)","termid":"PBO:0000863"}


id: PR:O13879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1B3.15C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.15c","synonyms":[{"name":"Spom972h-SPAC1B3.15c","type":"exact"}],"termid":"PR:O13879"}


id: PBO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor A1, pseudogene","termid":"PBO:0052546"}


id: FYPO:0006813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions does not occur.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere CENP-A containing region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation absent at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006813"}


id: PBO:0066040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 9","termid":"PBO:0066040"}


id: PBO:0031804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_G1/S_phase_transition","termid":"PBO:0031804"}


id: PBO:0072325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 11","termid":"PBO:0072325"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:2719476","GOC:jl","PMID:8423010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: PBO:0026918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_rRNA_modification","termid":"PBO:0026918"}


id: PBO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase Pho1","termid":"PBO:0004957"}


id: GO:0070681
data:
  {"annotated_genes":["SJAG_05560","SJAG_02721","SJAG_01577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71858,74538,113470],"is_not":false,"summary":null,"term":"GO:0070681"}]},"cv_name":"biological_process","definition":"A tRNA aminoacylation process in which glutaminyl-tRNAGln is formed by a tRNA-dependent two-step pathway. In the first step a non-discriminating glutamyl-tRNAGlx synthetase generates the misacylated L-glutamyl-tRNAGln species, and in the second step it is amidated to the correctly charged L-glutaminyl-tRNAGln by a glutamyl-tRNAGln amidotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation","termid":"GO:0043039"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"glutaminyl-tRNAGln biosynthesis via transamidation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070681","terms_by_termid":{"GO:0070681":null}}


id: PBO:0085858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; relocalizes from nucleus to nucleolus upon DNA replication stress","termid":"PBO:0085858"}


id: PBO:0047776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC2 antisense RNA 1","termid":"PBO:0047776"}


id: PBO:0061618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4","termid":"PBO:0061618"}


id: PBO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 6","termid":"PBO:0046720"}


id: PBO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_during_vegetative_growth","termid":"PBO:0031764"}


id: PBO:0063499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDLIM7 antisense RNA 1","termid":"PBO:0063499"}


id: PBO:0079958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 8","termid":"PBO:0079958"}


id: PBO:0086767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to telomere-encoded helicases; down-regulated at low calcium levels; YPR202W is not an essential gene; transcript is predicted to be spliced but there is no evidence that it is spliced in vivo","termid":"PBO:0086767"}


id: GO:0098597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Learning that occurs through observing the behavior of others.","definition_xrefs":["GOC:dos","Wikipedia:Observational_learning&oldid=603524137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"learning","termid":"GO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"observational learning","secondary_identifiers":["Wikipedia:Observational_learning"],"termid":"GO:0098597"}


id: PBO:0051546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 signal transducer pseudogene 1","termid":"PBO:0051546"}


id: PBO:0053763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1005","termid":"PBO:0053763"}


id: GO:0010342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The separation of the multi-nucleate endosperm into individual cells. In many plant species, the endosperm that nurtures the embryo in the seed initially develops as a syncytium. This syncytial phase ends with simultaneous partitioning of the multi-nucleate cytoplasm into individual cells, a process referred to as cellularization.","definition_xrefs":["PMID:12421698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosperm cellularization","synonyms":[{"name":"cellularization of endosperm","type":"exact"}],"termid":"GO:0010342"}


id: PBO:0017706
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae BET2","termid":"PBO:0017706"}


id: PBO:0039584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 3","termid":"PBO:0039584"}


id: PBO:0088255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3","termid":"PBO:0088255"}


id: PBO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor (predicted)","termid":"PBO:0000136"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["GOC:lm","PMID:15726494","PMID:15907921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: PBO:0081531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 441","termid":"PBO:0081531"}


id: PBO:0081726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 654","termid":"PBO:0081726"}


id: PBO:0070040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1337, pseudogene","termid":"PBO:0070040"}


id: FYPO:0004313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to CENP-A containing chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to CENP-A containing chromatin","termid":"FYPO:0004311"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to CENP-A containing chromatin","synonyms":[{"name":"decreased protein localisation to CENP-A containing chromatin","type":"exact"},{"name":"decreased protein localization to CENP-A containing chromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to CENP-A containing chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric core region chromatin","type":"exact"},{"name":"reduced protein localization to CENP-A containing chromatin","type":"exact"}],"termid":"FYPO:0004313"}


id: PBO:0070030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1327, pseudogene","termid":"PBO:0070030"}


id: PBO:0002054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (predicted)","termid":"PBO:0002054"}


id: GO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to transforming growth factor beta","synonyms":[{"name":"response to TGF-beta stimulus","type":"exact"},{"name":"response to TGFbeta stimulus","type":"exact"},{"name":"response to transforming growth factor beta stimulus","type":"exact"}],"termid":"GO:0071559"}


id: PBO:0028987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_than_four_spores","termid":"PBO:0028987"}


id: PBO:0076499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 2","termid":"PBO:0076499"}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: PR:O94695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet2 gene.","definition_xrefs":["UniProtKB:O94695","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter C83.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.11","synonyms":[{"name":"Spom972h-pet2","type":"exact"}],"termid":"PR:O94695"}


id: GO:0015428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type I protein secretor activity (obsolete GO:0015428)","synonyms":[{"name":"type I protein secretor activity","type":"exact"}],"termid":"GO:0015428"}


id: FYPO:0007791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to magnesium starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:33970532","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to magnesium starvation","synonyms":[{"name":"RNA absent from cell during cellular response to magnesium starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to magnesium starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during magnesium depletion","type":"exact"},{"name":"RNA absent from cell during magnesium deprivation","type":"exact"},{"name":"RNA absent from cell during magnesium starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to magnesium starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to magnesium starvation","type":"exact"}],"termid":"FYPO:0007791"}


id: PBO:0091171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion","termid":"PBO:0091171"}


id: GO:0014869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muscle inactivity stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of inactivity","termid":"GO:0014863"},{"relation_name":"is_a","term_name":"response to muscle inactivity","termid":"GO:0014870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muscle inactivity","termid":"GO:0014869"}


id: PATO:0002047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located on the side nearest to the axis of an organ or organism.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/adaxial"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaxial to","termid":"PATO:0002047"}


id: GO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that stops, prevents, or reduces the frequency, rate or extent of translational termination of a host mRNA.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host translation","termid":"GO:0019057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"suppression by virus of host translation termination","synonyms":[{"name":"negative regulation by virus of host cell protein biosynthesis shutoff","type":"exact"},{"name":"negative regulation by virus of host cell protein biosynthetic process shutoff","type":"exact"},{"name":"suppression by virus of host termination of protein biosynthetic process","type":"related"},{"name":"viral inhibition of host cell protein biosynthesis shutoff","type":"exact"},{"name":"viral inhibition of host cell protein biosynthetic process shutoff","type":"exact"},{"name":"viral inhibition of termination of host cell protein biosynthesis","type":"exact"},{"name":"viral inhibition of termination of host cell protein biosynthetic process","type":"exact"},{"name":"viral suppression of termination by host of host cell protein biosynthesis","type":"exact"},{"name":"viral suppression of termination by host of host cell protein biosynthetic process","type":"exact"}],"termid":"GO:0046773"}


id: PBO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: GO:0046789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor on the host cell surface.","definition_xrefs":["PMID:11511370","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell surface binding","termid":"GO:0046812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"host cell surface receptor binding","synonyms":[{"name":"cell surface antigen activity, host-interacting","type":"related"},{"name":"cell surface receptor ligand","type":"related"}],"termid":"GO:0046789"}


id: PBO:0075957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducing adaptor family member 1","termid":"PBO:0075957"}


id: _global:has_cross_section
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"s3 has_cross_section s3 if and only if : there exists some 2d plane that intersects the bearer of s3, and the impression of s3 upon that plane has shape quality s2.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_cross_section","termid":"_global:has_cross_section"}


id: GO:0004954
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a prostanoid, any compound based on or derived from the prostanoate structure, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid receptor activity","termid":"GO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"prostanoid receptor activity","termid":"GO:0004954"}


id: PBO:0038985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2B","termid":"PBO:0038985"}


id: PBO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MIZ","termid":"PBO:0000656"}


id: FYPO:0001508
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abolished protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0001508","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: FYPO:0005979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin filament bundle organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle. Actin filament bundles are assemblies of actin filaments organized along a single axis.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin filament bundle organization","synonyms":[{"name":"abnormal actin filament bundle organisation during vegetative growth","type":"exact"},{"name":"abnormal actin filament bundle organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle organization during vegetative growth","type":"exact"}],"termid":"FYPO:0005979"}


id: PBO:0040035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 2","termid":"PBO:0040035"}


id: PBO:0062146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 16","termid":"PBO:0062146"}


id: PBO:0071041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 43","termid":"PBO:0071041"}


id: PBO:0075895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 1","termid":"PBO:0075895"}


id: PBO:0048417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA binding protein 5","termid":"PBO:0048417"}


id: PBO:0004101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF1 family ribonuclease (predicted)","termid":"PBO:0004101"}


id: PBO:0050046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, H (pseudogene)","termid":"PBO:0050046"}


id: GO:0042719
data:
  {"annotated_genes":["SJAG_01949","SJAG_00687","SJAG_02524","SJAG_04208"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84418,86102,88422,111428],"is_not":false,"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane.","definition_xrefs":["PMID:12581629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"},{"relation_name":"part_of","term_name":"mitochondrial intermembrane space","termid":"GO:0005758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00687":null,"SJAG_01949":null,"SJAG_02524":null,"SJAG_04208":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intermembrane space protein transporter complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Tim9-Tim10 complex","type":"narrow"}],"termid":"GO:0042719","terms_by_termid":{"GO:0042719":null}}


id: GO:0098993
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of synaptic vesicle membrane (obsolete GO:0098993)","termid":"GO:0098993"}


id: PBO:0053932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1231","termid":"PBO:0053932"}


id: GO:0051957
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_03591","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94409,105827,87393,88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[88949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[87394,94410,88950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"positively_regulates","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of amino acid transport","type":"narrow"},{"name":"positive regulation of amino acid transmembrane transport","type":"exact"},{"name":"stimulation of amino acid transport","type":"narrow"},{"name":"up regulation of amino acid transport","type":"exact"},{"name":"up-regulation of amino acid transport","type":"exact"},{"name":"upregulation of amino acid transport","type":"exact"}],"termid":"GO:0051957","terms_by_termid":{"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: FYPO:0007893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein dephosphorylation is normal during mitotic exit (i.e. indistinguishable from wild type). Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["PMID:12546793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein dephosphorylation during vegetative growth","termid":"FYPO:0001922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein dephosphorylation during mitotic exit","termid":"FYPO:0007893"}


id: SO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleic acid from which replication initiates; includes sequences that are recognized by replication proteins, the site from which the first separation of complementary strands occurs, and specific replication start sites.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin_of_replication","secondary_identifiers":["http://en.wikipedia.org/wiki/Origin_of_replication"],"synonyms":[{"name":"INSDC_feature:rep_origin","type":"exact"},{"name":"ori","type":"exact"},{"name":"origin of replication","type":"exact"}],"termid":"SO:0000296"}


id: GO:2000355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"negatively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ovarian follicle development","synonyms":[{"name":"negative regulation of follicular phase","type":"related"}],"termid":"GO:2000355"}


id: PBO:0012604
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose Phosphate Isomerase","termid":"PBO:0012604"}


id: PBO:0079279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTK protein kinase","termid":"PBO:0079279"}


id: FYPO:0006448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, localization of a protein from the Golgi apparatus to the cleavage furrow ring is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow","synonyms":[{"name":"decreased rate of protein localisation from Golgi apparatus to cleavage furrow","type":"exact"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein localization from Golgi apparatus to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced rate of protein localization from Golgi apparatus to cleavage furrow","type":"exact"}],"termid":"FYPO:0006448"}


id: PBO:0109204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer kinetochore KNL network protein, KNL-1 family member, blinkin, Spc7","termid":"PBO:0109204"}


id: PBO:0057640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1231","termid":"PBO:0057640"}


id: PBO:0049911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase D","termid":"PBO:0049911"}


id: GO:0005613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete laminin receptor protein (obsolete GO:0005613)","synonyms":[{"name":"laminin receptor protein","type":"exact"}],"termid":"GO:0005613"}


id: PBO:0031711
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitophagy","termid":"PBO:0031711"}


id: GO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using actin filaments.","definition_xrefs":["VZ:991","UniProtKB-KW:KW-1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-dependent intracellular transport of virus","termid":"GO:0075520"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus towards nucleus","synonyms":[{"name":"actin-dependent intracellular transport of viral material towards nucleus","type":"exact"},{"name":"actin-dependent inwards viral transport","type":"exact"}],"termid":"GO:0039680"}


id: PBO:0074096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 10, pseudogene","termid":"PBO:0074096"}


id: GO:0019647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the ribulose monophosphate cycle. Methanotrophic bacteria produce formaldehyde from the oxidation of methane and methanol, and then assimilate it via the ribulose monophosphate cycle to form intermediates of the central metabolic routes that are subsequently used for biosynthesis of cell material. Three molecules of formaldehyde are assimilated, forming a three-carbon intermediate of central metabolism; in this pathway, all cellular carbon is assimilated at the oxidation level of formaldehyde.","definition_xrefs":["MetaCyc:PWY-1861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"formaldehyde assimilation via ribulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via RuMP cycle","type":"exact"},{"name":"ribulose monophosphate cycle","type":"broad"}],"termid":"GO:0019647"}


id: GO:1900472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8614637","GOC:dgf","GOC:TermGenie","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900472)","synonyms":[{"name":"positive regulation of phosphatidylcholine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylcholine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900472"}


id: PBO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein","termid":"PBO:0051635"}


id: GO:0097471
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a mossy fiber onto the dendrite of a granule cell; each mossy fiber can have up to 50 rosettes.","definition_xrefs":["NIF_Subcellular:nlx_subcell_091021","Wikipedia:Mossy_fiber_(cerebellum)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric synapse","termid":"GO:0032279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mossy fiber rosette","synonyms":[{"name":"cerebellar mossy fiber to granule cell synapse","type":"exact"}],"termid":"GO:0097471"}


id: PBO:0086315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with sequence similarity to iron/copper reductases; involved in iron homeostasis; deletion mutant has iron deficiency/accumulation growth defects; expression increased in the absence of copper-responsive transcription factor Mac1p","termid":"PBO:0086315"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: GO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tight junction","secondary_identifiers":["Wikipedia:Tight_junction"],"synonyms":[{"name":"occluding cell junction","type":"exact"},{"name":"occluding junction","type":"exact"}],"termid":"GO:0070160"}


id: GO:0003958
data:
  {"annotated_genes":["SJAG_00972","SJAG_04270","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76195,84000,88816],"is_not":false,"summary":null,"term":"GO:0003958"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + n oxidized hemoprotein = NADP+ + n reduced hemoprotein.","definition_xrefs":["EC:1.6.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00972":null,"SJAG_04270":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADPH-hemoprotein reductase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RHEA:24040","Reactome:R-HSA-76494","MetaCyc:NADPH--FERRIHEMOPROTEIN-REDUCTASE-RXN"],"synonyms":[{"name":"CPR activity","type":"related"},{"name":"FAD-cytochrome c reductase activity","type":"related"},{"name":"NADP--cytochrome c reductase activity","type":"narrow"},{"name":"NADP--cytochrome reductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome P450 reductase activity","type":"narrow"},{"name":"NADPH--cytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--cytochrome c reductase activity","type":"narrow"},{"name":"NADPH--ferricytochrome c oxidoreductase activity","type":"narrow"},{"name":"NADPH--ferrihemoprotein reductase activity","type":"narrow"},{"name":"NADPH-cytochrome P-450 oxidoreductase activity","type":"related"},{"name":"NADPH-cytochrome p-450 reductase activity","type":"related"},{"name":"NADPH-dependent cytochrome c reductase activity","type":"narrow"},{"name":"NADPH-ferrihemoprotein reductase activity","type":"exact"},{"name":"NADPH:P-450 reductase activity","type":"related"},{"name":"NADPH:P450 reductase activity","type":"narrow"},{"name":"NADPH:cytochrome P450 reductase activity","type":"exact"},{"name":"NADPH:cytochrome c reductase activity","type":"exact"},{"name":"NADPH:ferrihemoprotein oxidoreductase activity","type":"related"},{"name":"NADPH:hemoprotein oxidoreductase activity","type":"related"},{"name":"POR","type":"related"},{"name":"TPNH(2) cytochrome c reductase activity","type":"narrow"},{"name":"TPNH-cytochrome c reductase activity","type":"narrow"},{"name":"TPNH2 cytochrome c reductase activity","type":"related"},{"name":"aldehyde reductase (NADPH-dependent) activity","type":"related"},{"name":"cytochrome P-450 reductase activity","type":"related"},{"name":"cytochrome P450 reductase activity","type":"narrow"},{"name":"cytochrome c reductase (reduced nicotinamide adenine dinucleotide phosphate, NADPH, NADPH-dependent) activity","type":"narrow"},{"name":"dihydroxynicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"ferrihemoprotein P-450 reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-cytochrome c reductase activity","type":"narrow"},{"name":"reductase, cytochrome c (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"narrow"}],"termid":"GO:0003958","terms_by_termid":{"GO:0003958":null}}


id: PR:Q10303
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone cofactor E-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein alp21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.10","secondary_identifiers":["UniProtKB:Q10303"],"synonyms":[{"name":"Spom972h-TBCEL","type":"exact"},{"name":"altered polarity protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of tsm one protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10303"}


id: PBO:0080920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 9","termid":"PBO:0080920"}


id: PBO:0087844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thymidylate synthase; required for de novo biosynthesis of pyrimidine deoxyribonucleotides; expression is induced at G1/S; human homolog TYMSOS can complement yeast cdc21 temperature-sensitive mutant at restrictive temperature","termid":"PBO:0087844"}


id: MOD:00907
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-glutamine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-glutamine residue","synonyms":[{"name":"ModGln","type":"exact"}],"termid":"MOD:00907"}


id: PBO:0077324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 62","termid":"PBO:0077324"}


id: PR:A6X982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.13c","synonyms":[{"name":"Spom972h-SPBC15D4.13c","type":"exact"}],"termid":"PR:A6X982"}


id: GO:0048565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the digestive tract over time, from its formation to the mature structure. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"digestive system development","termid":"GO:0055123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract development","synonyms":[{"name":"gut development","type":"broad"},{"name":"intestinal development","type":"narrow"},{"name":"intestine development","type":"narrow"}],"termid":"GO:0048565"}


id: PBO:0056519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin basic protein","termid":"PBO:0056519"}


id: PBO:0052606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAS proto-oncogene, GTPase","termid":"PBO:0052606"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: PBO:0086381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients","termid":"PBO:0086381"}


id: PBO:0042645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 20 pseudogene","termid":"PBO:0042645"}


id: FYPO:0004489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid biosynthesis RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid biosynthesis RNAs are transcribed from genes whose products are involved in amino acid biosynthetic processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid metabolism gene mRNA during vegetative growth","termid":"FYPO:0002743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased level of amino acid biosynthesis gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid biosynthesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid biosynthesis gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid biosynthesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid biosynthesis gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004489"}


id: PBO:0064436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 1","termid":"PBO:0064436"}


id: PBO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human DLP1","termid":"PBO:0036334"}


id: PBO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein Dni1","termid":"PBO:0001828"}


id: FYPO:0002498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein modification is decreased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein modification","synonyms":[{"name":"decreased protein/peptide modification","type":"exact"},{"name":"protein/peptide modification: decreased","type":"related"},{"name":"reduced protein modification","type":"exact"}],"termid":"FYPO:0002498"}


id: PR:O74374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoglucomutase-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22573:SF5","PRO:DNx","OMA:SCHPO03429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.10","secondary_identifiers":["UniProtKB:O74374"],"synonyms":[{"name":"PGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM1","type":"exact"},{"name":"glucose phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74374"}


id: PBO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-56 (pseudogene)","termid":"PBO:0051468"}


id: GO:0038092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by nodal protein binding to an activin receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:17287255","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor signaling pathway","termid":"GO:0032924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nodal signaling pathway","synonyms":[{"name":"nodal signaling","type":"exact"},{"name":"nodal signalling pathway","type":"exact"}],"termid":"GO:0038092"}


id: FYPO:0002398
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[114497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[114330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[114548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522"],"name":"abnormal actin cytoskeleton during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta","for3delta","pom1delta"],"synonyms":[{"name":"abnormal actin cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton physical object quality during vegetative growth","type":"exact"}],"termid":"FYPO:0002398","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0083319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF IMA3/YIL172C","termid":"PBO:0083319"}


id: PBO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12","termid":"PBO:0044606"}


id: FYPO:0002023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the septum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"},{"relation_name":"output_of","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"abnormal septum morphology during vegetative growth","synonyms":[{"name":"abnormal septum morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002023"}


id: PBO:0079471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin actin binding protein 2","termid":"PBO:0079471"}


id: GO:0071470
data:
  {"annotated_genes":["SJAG_04726","SJAG_02342","SJAG_04668","SJAG_03185","SJAG_02592","SJAG_04205","SJAG_00661","SJAG_00596","SJAG_02091","SJAG_03893","SJAG_00409","SJAG_01084","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87543,89975,91553,98238,99951,101876,105631,109672,111445,112208],"is_not":false,"summary":null,"term":"GO:0071470"},{"annotations":[88035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[85239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[95664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_01084":null,"SJAG_02091":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_04205":null,"SJAG_04668":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to osmotic stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular osmotic response","type":"exact"},{"name":"cellular osmotic stress response","type":"exact"}],"termid":"GO:0071470","terms_by_termid":{"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null}}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: GO:0110090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["PMID:18940801","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"},{"relation_name":"positively_regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hippocampal neuron apoptotic process","termid":"GO:0110090"}


id: PBO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 38","termid":"PBO:0060050"}


id: PBO:0077607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 13","termid":"PBO:0077607"}


id: PBO:0083546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized gene YCR087C-A; YCR087W is not an essential gene","termid":"PBO:0083546"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: GO:1904704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["PMID:26412237","GOC:TermGenie","GOC:bc","GOC:aruk","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell-cell junction","termid":"GO:0150107"},{"relation_name":"is_a","term_name":"regulation of protein localization to adherens junction","termid":"GO:1904702"},{"relation_name":"positively_regulates","term_name":"protein localization to adherens junction","termid":"GO:0071896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to adherens junction","synonyms":[{"name":"activation of protein localisation in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localisation to cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization in cell-cell adherens junction","type":"narrow"},{"name":"activation of protein localization to cell-cell adherens junction","type":"narrow"},{"name":"positive regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"positive regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"up-regulation of protein localization to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localisation to cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization in cell-cell adherens junction","type":"exact"},{"name":"upregulation of protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:1904704"}


id: GO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"maternal process involved in female pregnancy","termid":"GO:0060135"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal placenta development","synonyms":[{"name":"decidua development","type":"related"}],"termid":"GO:0001893"}


id: PBO:0042012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 69","termid":"PBO:0042012"}


id: PBO:0038402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_subfunction","termid":"PBO:0038402"}


id: GO:0010690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress","termid":"GO:0010690"}


id: PBO:0029291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_meiosis","termid":"PBO:0029291"}


id: GO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-ornithine, the D-enantiomer of the amino acid ornithine, i.e. (2R)-2,5-diaminopentanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"D-ornithine metabolic process","synonyms":[{"name":"D-ornithine metabolism","type":"exact"}],"termid":"GO:0033056"}


id: GO:1905515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a non-motile cilium.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:cilia","GOC:kmv","PMID:14521833","PMID:14521834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"non-motile cilium assembly","secondary_identifiers":["GO:0035058"],"synonyms":[{"name":"immotile primary cilium assembly","type":"related"},{"name":"non-motile cilium formation","type":"exact"},{"name":"nonmotile cilium assembly","type":"exact"},{"name":"nonmotile cilium formation","type":"exact"},{"name":"nonmotile primary cilia assembly","type":"related"},{"name":"nonmotile primary cilium assembly","type":"related"},{"name":"sensory cilium assembly","type":"related"},{"name":"sensory cilium biogenesis","type":"related"}],"termid":"GO:1905515"}


id: GO:0034089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase during a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of sister chromatid cohesion","termid":"GO:0034085"},{"relation_name":"part_of","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"establishment of meiotic sister chromatid cohesion","termid":"GO:0034089"}


id: PBO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 3","termid":"PBO:0044507"}


id: PBO:0085267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal 2,4-dienoyl-CoA reductase; auxiliary enzyme of fatty acid beta-oxidation; homodimeric enzyme required for growth and sporulation on petroselineate medium; expression induced during late sporulation and in the presence of oleate","termid":"PBO:0085267"}


id: PBO:0056856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIA SH3 domain ER export factor 2","termid":"PBO:0056856"}


id: GO:0033228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cysteine from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"},{"relation_name":"is_a","term_name":"cysteine transmembrane transport","termid":"GO:1903712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cysteine export across plasma membrane","synonyms":[{"name":"cysteine export","type":"broad"}],"termid":"GO:0033228"}


id: GO:0051176
data:
  {"annotated_genes":["SJAG_03538","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84784,108906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving sulfur or compounds containing sulfur.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"positively_regulates","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfur metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sulfur metabolic process","type":"narrow"},{"name":"positive regulation of sulfur metabolism","type":"exact"},{"name":"positive regulation of sulphur metabolic process","type":"exact"},{"name":"positive regulation of sulphur metabolism","type":"exact"},{"name":"stimulation of sulfur metabolic process","type":"narrow"},{"name":"up regulation of sulfur metabolic process","type":"exact"},{"name":"up-regulation of sulfur metabolic process","type":"exact"},{"name":"upregulation of sulfur metabolic process","type":"exact"}],"termid":"GO:0051176","terms_by_termid":{"GO:0090180":null}}


id: PBO:0086994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon protein; involved in nuclear pore assembly and maintenance of tubular ER morphology; promotes membrane curvature; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; increases tubular ER when overexpressed; mutants have reduced phosphatidylserine transfer between the ER and mitochondria; interacts with exocyst subunit Sec6p, Yip3p, and Sbh1p; member of the RTNLA subfamily","termid":"PBO:0086994"}


id: _global:decreased_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is present to a lower extent than in a preceding phase or process, where the experiment does not distinguish between decreased addition and increased removal of the modification (if this is known use the added_during or removed_during relation).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_during","termid":"_global:decreased_during"}


id: PBO:0059387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23","termid":"PBO:0059387"}


id: PBO:0056422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myristoylated alanine rich protein kinase C substrate pseudogene 1","termid":"PBO:0056422"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: GO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate.","definition_xrefs":["EC:2.8.2.11","RHEA:20613","PMID:10727929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose 3-O-sulfotransferase activity","termid":"GO:0050694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016782","GO:0003674"],"is_obsolete":false,"name":"galactosylceramide sulfotransferase activity","secondary_identifiers":["MetaCyc:GALACTOSYLCERAMIDE-SULFOTRANSFERASE-RXN","Reactome:R-HSA-9844587"],"synonyms":[{"name":"3'-phosphoadenosine-5'-phosphosulfate-cerebroside sulfotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylceramide 3'-sulfotransferase activity","type":"related"},{"name":"GSase","type":"related"},{"name":"cerebroside sulfotransferase activity","type":"exact"},{"name":"galactocerebroside sulfotransferase activity","type":"related"},{"name":"galactolipid sulfotransferase activity","type":"related"},{"name":"galactosylceramide sulphotransferase activity","type":"exact"},{"name":"glycolipid sulfotransferase activity","type":"related"},{"name":"glycosphingolipid sulfotransferase activity","type":"related"}],"termid":"GO:0001733"}


id: PBO:0057330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520e","termid":"PBO:0057330"}


id: PBO:0072904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 2","termid":"PBO:0072904"}


id: GO:1903120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the location of an actin filament bundle.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin filament bundle","synonyms":[{"name":"protein localisation in actin filament bundle","type":"exact"},{"name":"protein localisation to actin filament bundle","type":"exact"},{"name":"protein localization in actin filament bundle","type":"exact"},{"name":"protein localization to actin cable","type":"related"}],"termid":"GO:1903120"}


id: PBO:0062179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily M member 2B","termid":"PBO:0062179"}


id: GO:0098864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a symbiont organism that stabilizes the its host tight cell-cell junctions, making them less dynamic. The tight junction is a cell-cell junction that seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other, and plays a role in the inflammatory response of the host.","definition_xrefs":["PMID:25838979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host tight cell-cell junction","termid":"GO:0098865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated stabilization of host tight cell-cell junction","synonyms":[{"name":"modification by symbiont of host tight cell-cell junction","type":"broad"},{"name":"stabilization of host tight cell-cell junction","type":"broad"}],"termid":"GO:0098864"}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_02908","SJAG_05373","SJAG_05280","SJAG_01648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73684,84319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[92693,72505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0004527","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: PBO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 1","termid":"PBO:0050412"}


id: PBO:0012015
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the phenotypes attributed to ima1 in PMID:18692466 have since been attributed to a truncated allele of SPAC11E3.05","termid":"PBO:0012015"}


id: PBO:0053493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 471","termid":"PBO:0053493"}


id: PBO:0083276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene SCS2","termid":"PBO:0083276"}


id: PBO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF Sec72","termid":"PBO:0002494"}


id: GO:0046078
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103714,78002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUMP, deoxyuridine (5'-)monophosphate (2'-deoxyuridine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dUMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"dUMP metabolism","type":"exact"}],"termid":"GO:0046078","terms_by_termid":{"GO:0006226":null}}


id: GO:0035703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte from the bone marrow to the blood stream.","definition_xrefs":["GOC:BHF","CL:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte migration into blood stream","synonyms":[{"name":"release of monocytes into circulation","type":"exact"}],"termid":"GO:0035703"}


id: GO:0048905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast mantle cell differentiation","termid":"GO:0048888"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast mantle cell differentiation","termid":"GO:0048905"}


id: PBO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Bub3","termid":"PBO:0001581"}


id: PBO:0062394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 15 pseudogene","termid":"PBO:0062394"}


id: PATO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling or containing flesh.","definition_xrefs":["wiktionary:http://en.wiktionary.org/wiki/fleshy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fleshy","termid":"PATO:0002351"}


id: PBO:0082772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle pole body outer plaque; required for spindle orientation and mitotic nuclear migration; CNM67 has a paralog, ADY3, that arose from the whole genome duplication","termid":"PBO:0082772"}


id: PBO:0084070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase involved in initiation of Mitotic Exit Network (MEN); GTP-binding protein of the Ras superfamily; accumulates at daughter spindle pole body and activates MEN kinase cascade; controls actomyosin and septin dynamics during cytokinesis","termid":"PBO:0084070"}


id: PBO:0085786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase","termid":"PBO:0085786"}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: PBO:0049024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 3","termid":"PBO:0049024"}


id: PBO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Synthetic Lethal with Rad2 mutant","termid":"PBO:0005472"}


id: PBO:0091534
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ADP-Pi-bound F-actin Kd 220 nM","termid":"PBO:0091534"}


id: GO:0032669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-25 production.","definition_xrefs":["GOC:mah","PMID:27901018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-25 production","termid":"GO:0032629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-25 production","secondary_identifiers":["GO:0045529","GO:0150148"],"synonyms":[{"name":"regulation of IL-25 production","type":"exact"},{"name":"regulation of interleukin-25 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-25 secretion","type":"narrow"}],"termid":"GO:0032669"}


id: PR:Q10327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC32A11.02c gene.","definition_xrefs":["UniProtKB:Q10327","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C32A11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.02c","synonyms":[{"name":"Spom972h-SPAC32A11.02c","type":"exact"}],"termid":"PR:Q10327"}


id: GO:0030982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the controlled movement of a bacterial cell powered by the rearward secretion of carbohydrate slime.","definition_xrefs":["GOC:mlg","PMID:11967173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adventurous gliding motility","synonyms":[{"name":"adventurous gliding movement","type":"exact"}],"termid":"GO:0030982"}


id: FYPO:0007212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at heterochromatin islands is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin silencing","termid":"FYPO:0002353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased chromatin silencing at heterochromatin island","synonyms":[{"name":"decreased chromatin silencing at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced chromatin silencing at heterochromatin island","type":"exact"}],"termid":"FYPO:0007212"}


id: PBO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOA1 antisense RNA","termid":"PBO:0039710"}


id: GO:0008278
data:
  {"annotated_genes":["SJAG_03418","SJAG_01831","SJAG_05019","SJAG_03926","SJAG_01067","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83601,103174,103097,112190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030893"},{"annotations":[112002,103098,86606,83602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030892"}]},"cv_name":"cellular_component","definition":"A protein complex that is required for sister chromatid cohesion in eukaryotes. The cohesin complex forms a molecular ring complex, and is composed of structural maintenance of chromosomes (SMC) and kleisin proteins. For example, in yeast, the complex is composed of the SMC proteins Smc1p and Smc3p, and the kleisin protein Scc1p. In vertebrates, the complex is composed of the SMC1 (SMC1A or SMC1B) and SMC3 heterodimer attached via their hinge domains to a kleisin (RAD21, REC8 or RAD21L) which links them, and one STAG protein (STAG1, STAG2 or STAG3).","definition_xrefs":["GOC:vw","GOC:sp","GOC:jl","PMID:9887095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01831":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008279","GO:0043222","GO:0008280","GO:0000798"],"synonyms":[{"name":"14S cohesin","type":"narrow"},{"name":"9S cohesin","type":"narrow"},{"name":"SMC complex","type":"related"},{"name":"SMC/kleisin ring complex","type":"exact"},{"name":"Smc1-Smc3 complex","type":"narrow"},{"name":"cohesin core heterodimer","type":"related"},{"name":"nuclear cohesin complex","type":"related"}],"termid":"GO:0008278","terms_by_termid":{"GO:0030892":null,"GO:0030893":null}}


id: PBO:0028168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028168"}


id: PBO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 3","termid":"PBO:0047350"}


id: PBO:0090423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41","termid":"PBO:0090423"}


id: PBO:0044457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 36, pseudogene","termid":"PBO:0044457"}


id: PBO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 2","termid":"PBO:0050285"}


id: PBO:0059175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRAP antisense RNA 1","termid":"PBO:0059175"}


id: PR:P48003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pht1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P48003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.10c","synonyms":[{"name":"Spom972h-pht1","type":"exact"}],"termid":"PR:P48003"}


id: PBO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telobox motif","termid":"PBO:0001879"}


id: PBO:0040110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 1","termid":"PBO:0040110"}


id: GO:1903749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["PMID:16857185","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"activation of establishment of protein localisation to mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization in mitochondrion","type":"narrow"},{"name":"activation of establishment of protein localization to mitochondrion","type":"narrow"},{"name":"positive regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"positive regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"up-regulation of establishment of protein localization to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization in mitochondrion","type":"exact"},{"name":"upregulation of establishment of protein localization to mitochondrion","type":"exact"}],"termid":"GO:1903749"}


id: SO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a start codon other than AUG.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"contains","term_name":"non_canonical_start_codon","termid":"SO:0000680"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_non_canonical_start_codon","synonyms":[{"name":"gene with non canonical start codon","type":"exact"}],"termid":"SO:0001739"}


id: PBO:0004422
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates eng1 target genes","termid":"PBO:0004422"}


id: PBO:0073324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress associated endoplasmic reticulum protein family member 2","termid":"PBO:0073324"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:22704558","PMID:21078962","PMID:22705370","PMID:22759634","PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: PBO:0077132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPARP antisense RNA 1","termid":"PBO:0077132"}


id: PR:O42645
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A secretion-regulating guanine nucleotide exchange factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00488","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 repeat-containing protein C10F6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.04","secondary_identifiers":["UniProtKB:O42645"],"synonyms":[{"name":"Spom972h-SERGEF","type":"exact"}],"termid":"PR:O42645"}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["UniProtKB:O59814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: PBO:0071964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A3","termid":"PBO:0071964"}


id: GO:0002832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to biotic stimulus","synonyms":[{"name":"down regulation of response to biotic stimulus","type":"exact"},{"name":"down-regulation of response to biotic stimulus","type":"exact"},{"name":"downregulation of response to biotic stimulus","type":"exact"},{"name":"inhibition of response to biotic stimulus","type":"narrow"}],"termid":"GO:0002832"}


id: PBO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_direct_input","termid":"PBO:0011056"}


id: GO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of one bond in native collagen. Cleavage of the triple helix of collagen at about three-quarters of the length of the molecule from the N-terminus, at Gly775-Ile776 in the alpha-1(I) chain. Cleaves synthetic substrates and alpha-macroglobulins at bonds where P1' is a hydrophobic residue.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interstitial collagenase activity (obsolete GO:0004232)","synonyms":[{"name":"MMP-1","type":"exact"},{"name":"interstitial collagenase activity","type":"exact"},{"name":"matrix metalloproteinase 1","type":"exact"},{"name":"vertebrate collagenase activity","type":"related"}],"termid":"GO:0004232"}


id: GO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell fate commitment","termid":"GO:0072146"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell fate commitment","synonyms":[{"name":"metanephric distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072242"}


id: GO:1900192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation","termid":"GO:0044010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation","synonyms":[{"name":"activation of single-species biofilm formation","type":"narrow"},{"name":"up regulation of single-species biofilm formation","type":"exact"},{"name":"up-regulation of single-species biofilm formation","type":"exact"},{"name":"upregulation of single-species biofilm formation","type":"exact"}],"termid":"GO:1900192"}


id: GO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"positive regulation of TLR11 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034173"}


id: GO:1905082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25738458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial translational elongation","synonyms":[{"name":"regulation of mitochondrial translation elongation","type":"exact"}],"termid":"GO:1905082"}


id: PBO:0029594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_plasma_membrane_during_vegetative_growth","termid":"PBO:0029594"}


id: PBO:0059893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 16","termid":"PBO:0059893"}


id: GO:0009703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+.","definition_xrefs":["EC:1.7.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitrate reductase (NADH) activity","secondary_identifiers":["MetaCyc:NITRATE-REDUCTASE-NADH-RXN","RHEA:17913"],"synonyms":[{"name":"NADH-dependent nitrate reductase activity","type":"related"},{"name":"NADH-nitrate reductase activity","type":"related"},{"name":"NADH:nitrate oxidoreductase activity","type":"related"},{"name":"NADH:nitrate reductase activity","type":"exact"},{"name":"assimilatory NADH: nitrate reductase activity","type":"related"},{"name":"assimilatory NADH:nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"nitrate reductase (NADH(2)) activity","type":"related"},{"name":"nitrate reductase (NADH2)","type":"related"},{"name":"nitrite:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009703"}


id: PBO:0071867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 5","termid":"PBO:0071867"}


id: GO:0006069
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98903],"is_not":false,"summary":null,"term":"GO:0006069"}]},"cv_name":"biological_process","definition":"An ethanol metabolic process in which ethanol is converted to acetyl-CoA via acetaldehyde and acetate.","definition_xrefs":["MetaCyc:PWY66-161","MetaCyc:PWY66-162","GOC:mah","MetaCyc:PWY66-21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"ethanol oxidation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006069","terms_by_termid":{"GO:0006069":null}}


id: GO:0099632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which protein is transported from one region of the plasma membrane to another.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"protein transport within plasma membrane","termid":"GO:0099632"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: PBO:0047678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin B","termid":"PBO:0047678"}


id: FYPO:0003153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to heat","synonyms":[{"name":"normal protein accumulation during cellular response to heat","type":"related"},{"name":"normal protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to heat during vegetative growth","type":"exact"}],"termid":"FYPO:0003153"}


id: PBO:0044324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 4","termid":"PBO:0044324"}


id: PBO:0080154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VCAN antisense RNA 1","termid":"PBO:0080154"}


id: GO:0070436
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR) and Grb2, and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Grb2-EGFR complex","synonyms":[{"name":"Grb2-Egfr complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070436"}


id: GO:2000093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"}


id: GO:0051593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a folic acid stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to folic acid","synonyms":[{"name":"cellular response to folate","type":"exact"},{"name":"cellular response to vitamin B9","type":"exact"}],"termid":"GO:0051593"}


id: PBO:0062223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AR member 1","termid":"PBO:0062223"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: PR:O13686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 59 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RWD, RING finger and WD repeat-containing protein C11E3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.05","secondary_identifiers":["UniProtKB:O13686"],"synonyms":[{"name":"Spom972h-WDR59","type":"exact"}],"termid":"PR:O13686"}


id: PBO:0065960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23B pseudogene 2","termid":"PBO:0065960"}


id: PR:Q10232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl901 gene.","definition_xrefs":["UniProtKB:Q10232","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.16c","synonyms":[{"name":"Spom972h-rpl901","type":"exact"}],"termid":"PR:Q10232"}


id: GO:0016205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: selenocysteine + S-adenosyl-L-methionine = Se-methylselenocysteine + S-adenosyl-homocysteine.","definition_xrefs":["EC:2.1.1.280","PMID:10026151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Se-methyltransferase activity","termid":"GO:0051995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"selenocysteine methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11061","RHEA:26341"],"termid":"GO:0016205"}


id: MOD:00751
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid linked residue","synonyms":[{"name":"RNARes","type":"exact"}],"termid":"MOD:00751"}


id: PBO:0060363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomesin 2","termid":"PBO:0060363"}


id: PBO:0091955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf13","termid":"PBO:0091955"}


id: GO:2000881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch catabolic process","synonyms":[{"name":"regulation of starch breakdown","type":"exact"},{"name":"regulation of starch catabolism","type":"exact"},{"name":"regulation of starch degradation","type":"exact"}],"termid":"GO:2000881"}


id: PBO:0026907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0026907"}


id: PBO:0079578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 B","termid":"PBO:0079578"}


id: PBO:0078270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 6-1","termid":"PBO:0078270"}


id: PBO:0081049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 7","termid":"PBO:0081049"}


id: PBO:0061562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 4","termid":"PBO:0061562"}


id: FYPO:0005395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein phosphorylation during cellular response to MMS","type":"exact"},{"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005395"}


id: GO:1904068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in social behavior.","definition_xrefs":["PMID:22665789","GO_REF:0000060","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"social behavior","termid":"GO:0035176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in social behavior","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signaling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signaling pathway involved in social behavior","type":"exact"},{"name":"GPCR signaling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signalling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signalling pathway involved in social behavior","type":"exact"},{"name":"GPCR signalling pathway involved in social behaviour","type":"exact"}],"termid":"GO:1904068"}


id: PBO:0084778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane receptor for cytosolic ribosomes; integral protein of the outer membrane that interacts with the nascent chain-associated complex (NAC) bound to ribosomes, contributing to co-translational mitochondrial import; interacts with porin (Por1p) and Om45p; abundance is decreased in cells grown in glucose relative to other carbon sources","termid":"PBO:0084778"}


id: PBO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase sububit Gem1 (predicted)","termid":"PBO:0014302"}


id: PBO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog (predicted)","termid":"PBO:0002183"}


id: FYPO:0002145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to diethyl maleate (DEM), a compound which can induce oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during cellular response to oxidative stress","termid":"FYPO:0001789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to DEM","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to DEM","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0002145"}


id: PBO:0091745
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPBC18H10.16 was previously designated as can1","termid":"PBO:0091745"}


id: GO:1990653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a monounsaturated fatty acid. A monounsaturated fatty acid has one double bond in the fatty acid chain with all of the remainder carbon atoms being single-bonded, as opposed to polyunsaturated fatty acids.","definition_xrefs":["GOC:hjd","PMID:16443825"],"gene_count":0,"genotype_count":0,"name":"obsolete monounsaturated fatty acid biosynthetic process (obsolete GO:1990653)","termid":"GO:1990653"}


id: FYPO:0006362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the lncRNA borderline are present at lower levels than normal.","definition_xrefs":["PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased borderline-derived siRNA level","synonyms":[{"name":"decreased accumulation of borderline-derived siRNA","type":"exact"},{"name":"decreased accumulation of siRNAs homologous to borderline","type":"related"},{"name":"decreased borderline-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"decreased borderline-derived siRNA level during vegetative growth","type":"exact"},{"name":"decreased brdrRNA-derived siRNA level","type":"exact"},{"name":"decreased level of borderline-derived siRNA","type":"exact"},{"name":"decreased level of siRNAs homologous to borderline","type":"related"},{"name":"reduced borderline-derived siRNA level","type":"exact"}],"termid":"FYPO:0006362"}


id: PATO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of rate which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of rate","termid":"PATO:0001586"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of rate","synonyms":[{"name":"high variability of rate","type":"exact"}],"termid":"PATO:0001587"}


id: FYPO:0005888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased, and some of the protein is present in the nucleoplasm instead.","definition_xrefs":["PMID:27666591","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","synonyms":[{"name":"decreased protein localisation to centromeric chromatin, with protein mislocalised to nucleoplasm","type":"exact"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at centromere, with protein mislocalized to nucleoplasm","type":"exact"},{"name":"reduced protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","type":"exact"}],"termid":"FYPO:0005888"}


id: PBO:0079093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 6-1","termid":"PBO:0079093"}


id: PBO:0076659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 21","termid":"PBO:0076659"}


id: FYPO:0005574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal nuclear transport during meiosis","synonyms":[{"name":"abnormal nuclear transport during meiotic nuclear division","type":"related"}],"termid":"FYPO:0005574"}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: FYPO:0004388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pyrimidine salvage RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Pyrimidine salvage RNAs are transcribed from genes whose products are involved in pyrimidine salvage.","definition_xrefs":["PomBase:mah","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of pyrimidine salvage gene mRNA during vegetative growth","synonyms":[{"name":"increased level of pyrimidine salvage gene RNA during vegetative growth","type":"exact"},{"name":"increased level of pyrimidine salvage gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of pyrimidine salvage gene transcripts during vegetative growth","type":"exact"},{"name":"increased pyrimidine salvage gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004388"}


id: GO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA region that controls transcription by a plastid RNA polymerase. Binding may occur as a sequence specific interaction or as an interaction observed only once a factor has been recruited to the DNA by other factors.","definition_xrefs":["GOC:txnOH","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"plastid promoter transcription regulatory region sequence-specific DNA binding","termid":"GO:0001019"}


id: FYPO:0007511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell undergoes normal (i.e. indistinguishable from wild type) mitosis upon release from a following release from a G2/M cell cycle block imposed by activation of the mitotic DNA replication checkpoint.","definition_xrefs":["PMID:17690116","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitosis","termid":"FYPO:0001007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint","synonyms":[{"name":"normal mitosis following cell cycle arrest in response to DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitosis following cell cycle arrest in response to mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"normal mitosis following release from a mitotic DNA replication cell cycle block","type":"exact"}],"termid":"FYPO:0007511"}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PBO:0028199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_mitotic_G1_phase","termid":"PBO:0028199"}


id: PBO:0032722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_and_H4-K16_acetylation_at_subtelomere","termid":"PBO:0032722"}


id: GO:0047188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-hydroxy-4-aminobiphenyl + N-hydroxy-4-acetylaminonbiphenyl = N-acetoxy-4-aminobiphenyl + N-hydroxy-4-aminobiphenyl.","definition_xrefs":["EC:2.3.1.56","MetaCyc:2.3.1.56-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"aromatic-hydroxylamine O-acetyltransferase activity","secondary_identifiers":["RHEA:20325"],"synonyms":[{"name":"N,O-acetyltransferase activity","type":"related"},{"name":"N-hydroxy-2-acetylaminofluorene N-O acyltransferase activity","type":"related"},{"name":"N-hydroxy-4-acetylaminobiphenyl:N-hydroxy-4-aminobiphenyl O-acetyltransferase activity","type":"related"},{"name":"aromatic hydroxylamine acetyltransferase activity","type":"related"},{"name":"arylhydroxamate acyltransferase activity","type":"related"},{"name":"arylhydroxamic acid N,O-acetyltransferase activity","type":"related"},{"name":"arylhydroxamic acyltransferase activity","type":"related"}],"termid":"GO:0047188"}


id: PBO:0069488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 755, pseudogene","termid":"PBO:0069488"}


id: GO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell projection organization","synonyms":[{"name":"down regulation of cell projection organization","type":"exact"},{"name":"down-regulation of cell projection organization","type":"exact"},{"name":"downregulation of cell projection organization","type":"exact"},{"name":"inhibition of cell projection organization","type":"narrow"},{"name":"negative regulation of cell projection organisation","type":"exact"},{"name":"negative regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031345"}


id: PBO:0089766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase","termid":"PBO:0089766"}


id: GO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the correct R8 cell spacing pattern in a compound eye.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R8 cell spacing in compound eye","synonyms":[{"name":"down regulation of R8 spacing","type":"exact"},{"name":"down-regulation of R8 spacing","type":"exact"},{"name":"downregulation of R8 spacing","type":"exact"},{"name":"inhibition of R8 spacing","type":"narrow"}],"termid":"GO:0045469"}


id: GO:1904846
data:
  {"annotated_genes":["SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86646],"is_not":false,"summary":null,"term":"GO:1904846"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of bipolar cell polarity.","definition_xrefs":["GO_REF:0000058","PMID:26525038","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity","termid":"GO:0061172"},{"relation_name":"negatively_regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of establishment of bipolar cell polarity","type":"exact"},{"name":"down-regulation of establishment of bipolar cell polarity","type":"exact"},{"name":"downregulation of establishment of bipolar cell polarity","type":"exact"},{"name":"inhibition of establishment of bipolar cell polarity","type":"narrow"}],"termid":"GO:1904846","terms_by_termid":{"GO:1904846":null}}


id: GO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter and stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:dph","PMID:15302821"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter (obsolete GO:0061427)","termid":"GO:0061427"}


id: GO:0090448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).","definition_xrefs":["PMID:22864417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glucosinolate:proton symporter activity","synonyms":[{"name":"glucosinolate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0090448"}


id: PBO:0005707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex zeta subunit Ost5 (predicted)","termid":"PBO:0005707"}


id: PBO:0056927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major intrinsic protein of lens fiber","termid":"PBO:0056927"}


id: GO:1903524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood circulation.","definition_xrefs":["GO_REF:0000058","PMID:10659969","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of blood circulation","termid":"GO:1903522"},{"relation_name":"positively_regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood circulation","synonyms":[{"name":"activation of blood circulation","type":"narrow"},{"name":"activation of hemolymph circulation","type":"related"},{"name":"positive regulation of hemolymph circulation","type":"related"},{"name":"up regulation of blood circulation","type":"exact"},{"name":"up regulation of hemolymph circulation","type":"related"},{"name":"up-regulation of blood circulation","type":"exact"},{"name":"up-regulation of hemolymph circulation","type":"related"},{"name":"upregulation of blood circulation","type":"exact"},{"name":"upregulation of hemolymph circulation","type":"related"}],"termid":"GO:1903524"}


id: GO:0072299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of metanephric glomerulus development, the progression of the metanephric glomerulus over time from its initial formation until its mature state. The metanephric glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney, or metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metanephros development","termid":"GO:0072217"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerulus development","termid":"GO:0072298"},{"relation_name":"is_a","term_name":"negative regulation of glomerulus development","termid":"GO:0090194"},{"relation_name":"negatively_regulates","term_name":"metanephric glomerulus development","termid":"GO:0072224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric glomerulus development","termid":"GO:0072299"}


id: FYPO:0005267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aluminium ions. Cells stop growing (and may die) at a concentration of aluminium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to aluminium","synonyms":[{"name":"hypersensitive to aluminium","type":"exact"},{"name":"sensitive to aluminium during mitotic cell cycle","type":"related"},{"name":"sensitive to aluminium during vegetative growth","type":"exact"},{"name":"sensitive to aluminium ions","type":"exact"},{"name":"sensitive to aluminum","type":"exact"}],"termid":"FYPO:0005267"}


id: PBO:0058659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6787","termid":"PBO:0058659"}


id: PBO:0039803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 1","termid":"PBO:0039803"}


id: PBO:0058844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8073","termid":"PBO:0058844"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: FYPO:0001631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular leucine level","termid":"FYPO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar leucine level","synonyms":[{"name":"normal level of leucine in vacuole","type":"exact"},{"name":"normal vacuolar L-leucine level","type":"exact"},{"name":"normal vacuolar leucine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar leucine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001631"}


id: GO:1990634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 5.","definition_xrefs":["PMID:8943293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase 5 binding","synonyms":[{"name":"protein phosphatase T binding","type":"exact"}],"termid":"GO:1990634"}


id: PBO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_or_gene_product","termid":"PBO:0006204"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: PBO:0055226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2652","termid":"PBO:0055226"}


id: GO:0097615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:als","PMID:12037568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of symbiont type IV pilus-dependent motility","synonyms":[{"name":"modulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097615"}


id: PBO:0027517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_carboxy-terminal_domain_kinase_activity","termid":"PBO:0027517"}


id: PBO:0066183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 7","termid":"PBO:0066183"}


id: PBO:0083785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes","termid":"PBO:0083785"}


id: PBO:0070131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 45 pseudogene","termid":"PBO:0070131"}


id: GO:0044731
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex composed of Ost-alpha/SLC51A and Ost-beta/SLC51B subunits and involved in bile acid transport activity.","definition_xrefs":["PMID:17650074","PMID:22535958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Ost-alpha/Ost-beta complex","synonyms":[{"name":"(Ost)2 complex","type":"related"},{"name":"Ost alpha-Ost beta complex","type":"exact"},{"name":"SLC51 complex","type":"exact"}],"termid":"GO:0044731"}


id: GO:1902330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any synthesis of RNA primer that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synthesis of RNA primer involved in cell cycle DNA replication","termid":"GO:1902295"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"synthesis of RNA primer involved in bacterial-type DNA replication","synonyms":[{"name":"replication priming involved in bacterial-type DNA replication","type":"related"}],"termid":"GO:1902330"}


id: PR:Q9USM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A11.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.15c","synonyms":[{"name":"Spom972h-SPCC16A11.15c","type":"exact"}],"termid":"PR:Q9USM2"}


id: PBO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A5, pseudogene","termid":"PBO:0046880"}


id: PBO:0018237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Sqt1 (predicted)","termid":"PBO:0018237"}


id: PBO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(5)(q35)","termid":"PBO:0047886"}


id: GO:1902563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil activation.","definition_xrefs":["PMID:17588661","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil activation","termid":"GO:1902563"}


id: PBO:0078989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon TTA) 2-1","termid":"PBO:0078989"}


id: PBO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10 (predicted)","termid":"PBO:0002203"}


id: GO:0019762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside catabolic process","termid":"GO:0016145"},{"relation_name":"is_a","term_name":"glycosinolate catabolic process","termid":"GO:0019759"},{"relation_name":"is_a","term_name":"glucosinolate metabolic process","termid":"GO:0019760"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"glucosinolate catabolic process","secondary_identifiers":["MetaCyc:PWY-5267"],"synonyms":[{"name":"glucosinolate breakdown","type":"exact"},{"name":"glucosinolate catabolism","type":"exact"},{"name":"glucosinolate degradation","type":"exact"}],"termid":"GO:0019762"}


id: PBO:0075580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 4","termid":"PBO:0075580"}


id: GO:0043604
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id: SO:0000899
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id: PR:O59739
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id: PBO:0080633
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id: GO:0039510
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id: PBO:0040590
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id: GO:0060524
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id: PBO:0056413
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id: PBO:0055255
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id: PBO:0089509
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id: PBO:0053965
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id: GO:0021822
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id: GO:0047712
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id: GO:0008306
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id: PBO:0059362
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id: PBO:0004283
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id: GO:0075322
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id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: PBO:0057322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519b","termid":"PBO:0057322"}


id: FYPO:0006011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly occurs along the lateral portion of the long axis of the cell instead of at one cell end.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000301","FYPO:0001985"],"is_obsolete":false,"name":"shmoo formation at cell side","synonyms":[{"name":"lateral shmoo formation","type":"exact"},{"name":"mating projection assembly at cell side","type":"exact"},{"name":"shmoo formation on cell side","type":"exact"}],"termid":"FYPO:0006011"}


id: GO:0052580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthone + NADP+ = (+)-pulegone + NADPH + H+.","definition_xrefs":["MetaCyc:RXN-5163","EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(+)-pulegone reductase, (-)-menthone as substrate, activity","secondary_identifiers":["MetaCyc:RXN-5164"],"synonyms":[{"name":"(-)-menthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052580"}


id: PBO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 10","termid":"PBO:0072193"}


id: PBO:0057830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3148","termid":"PBO:0057830"}


id: PBO:0053767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1012","termid":"PBO:0053767"}


id: PBO:0086001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Pbi2p; double null mutant lacking Pbi2p and Yhr138cp exhibits highly fragmented vacuoles; protein abundance increases in response to DNA replication stress","termid":"PBO:0086001"}


id: PBO:0089594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp4","termid":"PBO:0089594"}


id: PBO:0079793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A1 complex locus","termid":"PBO:0079793"}


id: PBO:0091654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane uricil/uridine transmembrane transporter transmembrane transporter family","termid":"PBO:0091654"}


id: PBO:0044173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha 2","termid":"PBO:0044173"}


id: FYPO:0002714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the Golgi apparatus is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to Golgi apparatus","synonyms":[{"name":"ectopic protein localization to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus","type":"exact"},{"name":"protein mislocalised to Golgi apparatus during vegetative growth","type":"exact"},{"name":"protein mislocalized to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002714"}


id: PBO:0055394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2824","termid":"PBO:0055394"}


id: FYPO:0004748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","PMID:24095277","GO:0043486","GO:0005721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"decreased protein exchange at pericentric heterochromatin","termid":"FYPO:0006359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone exchange at pericentric heterochromatin","synonyms":[{"name":"decreased histone exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased histone exchange at dh repeat","type":"narrow"},{"name":"decreased histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0004748"}


id: GO:0031857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid hormone receptor binding","termid":"GO:0031856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 parathyroid hormone receptor binding","synonyms":[{"name":"type 1 parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031857"}


id: PBO:0082035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase; catalyzes the acylation of lysophosphatidic acid to form phosphatidic acid, a key intermediate in lipid metabolism; enzymatic activity detected in lipid particles and microsomes","termid":"PBO:0082035"}


id: GO:0009093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cysteine, 2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006790","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"cysteine catabolic process","secondary_identifiers":["Wikipedia:Cysteine"],"synonyms":[{"name":"cysteine breakdown","type":"exact"},{"name":"cysteine catabolism","type":"exact"},{"name":"cysteine degradation","type":"exact"}],"termid":"GO:0009093"}


id: MOD:01954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:22031445","ChEBI:17123","PubMed:8239649","PubMed:12781460","PubMed:21420488","PubMed:1815586","PubMed:7947813","RESID:AA0181","PubMed:1547888","PubMed:20805503","PubMed:2914619","PubMed:10220322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: FYECO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the presence of one or more substances in a limited amount.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping limited","termid":"FYECO:0000011"}


id: GO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"positive regulation of NOD2 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070434"}


id: PBO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_growth","termid":"PBO:0030180"}


id: GO:0102136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 3-epi-6-deoxocathasterone + reduced (NADPH-hemoprotein reducdtase) + O2 = 6=deoxotyphasterol + oxidized (NADPH-hemoprotein reductase) + H2O.","definition_xrefs":["RHEA:27321","GOC:pz","PMID:17138693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-epi-6-deoxocathasterone C-23 hydroxylase activity","secondary_identifiers":["EC:1.14.14.147","MetaCyc:RXN-11531"],"termid":"GO:0102136"}


id: PBO:0088700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin activating enzyme E1 Uba1","termid":"PBO:0088700"}


id: PBO:0055861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 8","termid":"PBO:0055861"}


id: GO:0044100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complex infective apparatus corresponding to the central mass of cytoplasm within a spore that is injected into a host cell by various parasitic microorganisms.","definition_xrefs":["PMID:12076771","GOC:mf","PMID:16004371","PMID:9723921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sporoplasm","termid":"GO:0044100"}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


