# terms

id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71424,73340],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["PMID:8621375","EC:2.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:13345","GO:0018223","MetaCyc:RXN-17573","Reactome:R-HSA-2530501","Reactome:R-HSA-9647978"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: GO:0097152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["PMID:18231833","CL:0000134","GOC:yaf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process","synonyms":[{"name":"mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:0097152"}


id: PBO:0108591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell expressed HSF2 interacting lncRNA","termid":"PBO:0108591"}


id: PBO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase Dfr1","termid":"PBO:0005671"}


id: GO:0046879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of hormones, substances with a specific regulatory effect on a particular organ or group of cells.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"hormone secretion","termid":"GO:0046879"}


id: MOD:01997
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino or imino hydrogen with a butanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butanoylated residue","termid":"MOD:01996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-butanoylated residue","synonyms":[{"name":"N-butanoyl","type":"exact"},{"name":"N-butanoylation","type":"exact"},{"name":"N-butyryl","type":"exact"},{"name":"N-butyrylation","type":"exact"},{"name":"NButRes","type":"exact"}],"termid":"MOD:01997"}


id: SO:1001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by domain similarity.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_domain_match","termid":"SO:0000908"},{"relation_name":"is_a","term_name":"CDS_supported_by_sequence_similarity_data","termid":"SO:1001251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_domain_match_data","synonyms":[{"name":"CDS supported by domain match data","type":"exact"}],"termid":"SO:1001249"}


id: GO:0035614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem-loop in a small nuclear RNA (snRNA). An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["PMID:20455544","GOC:sart","PMID:16568238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA stem-loop binding","termid":"GO:0035613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNA stem-loop binding","synonyms":[{"name":"small nuclear RNA stem-loop binding","type":"exact"},{"name":"snRNA hairpin binding","type":"exact"},{"name":"snRNA hairpin loop binding","type":"exact"}],"termid":"GO:0035614"}


id: GO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the glyoxylate cycle by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11024040","PMID:17875938","PMID:19686338","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glyoxylate cycle by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035959)","synonyms":[{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate bypass by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glyoxylate cycle by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035959"}


id: PBO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 5","termid":"PBO:0047414"}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: PBO:0044485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily A member 1","termid":"PBO:0044485"}


id: PBO:0070034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1331, pseudogene","termid":"PBO:0070034"}


id: PBO:0057670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1261","termid":"PBO:0057670"}


id: PR:O74452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scw1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall integrity protein scw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.07","synonyms":[{"name":"Spom972h-scw1","type":"exact"},{"name":"strong cell wall protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74452"}


id: GO:0120035
data:
  {"annotated_genes":["SJAG_00514","SJAG_03453","SJAG_01794","SJAG_02379","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85589,86534,89105,106625,83684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of plasma membrane bounded cell projections.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plasma membrane bounded cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120035","terms_by_termid":{"GO:1902917":null}}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["GOC:BHF","PMID:24009894","PMID:15908444","PMID:17641064","PMID:19442504","GOC:mah","GOC:vesicles","PMID:19498381","PMID:22418571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: PBO:0026734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0026734"}


id: GO:0003875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-(ADP-D-ribosyl)-L-arginine + H2O = L-arginine + ADP-ribose.","definition_xrefs":["EC:3.2.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"ADP-ribosylarginine hydrolase activity","secondary_identifiers":["MetaCyc:ADP-RIBOSYLARGININE-HYDROLASE-RXN","RHEA:20784"],"synonyms":[{"name":"ADP-ribose-L-arginine cleavage enzyme activity","type":"related"},{"name":"ADP-ribose-L-arginine cleaving enzyme activity","type":"related"},{"name":"ADPribosylarginine hydrolase activity","type":"exact"},{"name":"N(omega)-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"omega-protein-N-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"},{"name":"protein ADP-ribosylarginine hydrolase activity","type":"related"},{"name":"protein-nomega-(ADP-D-ribosyl)-L-arginine ADP-ribosylhydrolase activity","type":"related"}],"termid":"GO:0003875"}


id: PBO:0069628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 905, pseudogene","termid":"PBO:0069628"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: PBO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atf-CREB subfamily","termid":"PBO:0002433"}


id: PBO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Nnf1","termid":"PBO:0002507"}


id: GO:0033067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["ISBN:0198506732","PMID:17298179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"macrolide metabolic process","synonyms":[{"name":"macrolide metabolism","type":"exact"}],"termid":"GO:0033067"}


id: PBO:0051865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISG15 ubiquitin like modifier","termid":"PBO:0051865"}


id: GO:1901354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-canavanine","termid":"GO:1901354"}


id: GO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene oxide = phenylacetaldehyde.","definition_xrefs":["EC:5.3.99.7","RHEA:21604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"styrene-oxide isomerase activity","secondary_identifiers":["UM-BBD_reactionID:r0034","KEGG_REACTION:R02615","MetaCyc:STYRENE-OXIDE-ISOMERASE-RXN"],"synonyms":[{"name":"SOI activity","type":"related"},{"name":"styrene oxide isomerase activity","type":"exact"},{"name":"styrene-oxide isomerase (epoxide-cleaving)","type":"related"}],"termid":"GO:0018846"}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: GO:0047588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminopentanamide + H2O = 5-aminopentanoate + NH3.","definition_xrefs":["EC:3.5.1.30","MetaCyc:5-AMINOPENTANAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"5-aminopentanamidase activity","secondary_identifiers":["RHEA:15677"],"synonyms":[{"name":"5-aminonorvaleramidase activity","type":"related"},{"name":"5-aminopentanamide amidohydrolase activity","type":"related"},{"name":"5-aminovaleramidase activity","type":"related"}],"termid":"GO:0047588"}


id: PBO:0091364
data:
  {"annotation_feature_type":"gene","cv_name":"m_f_g","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule plus-end tracking protein","termid":"PBO:0091364"}


id: PBO:0082678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; complex is involved in ubiquitin-dependent sorting of proteins into the endosome; conserved C-terminal domain interacts with ESCRT-III subunit Vps20p; other members include Stp22p, Srn2p, Vps28p, and Mvb12p","termid":"PBO:0082678"}


id: PR:000027499
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A p38-like stress-activated mitogen-activated protein kinase that is a translation product of the yeast HOG1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:10207620","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase HOG1","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"HOG1","type":"exact"},{"name":"MAP kinase spc1","type":"exact"},{"name":"STY1","type":"related"}],"termid":"PR:000027499"}


id: GO:0098569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.","definition_xrefs":["PMID:18316738","GOC:dos","PMID:18567661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"internal side of mycolate outer membrane","termid":"GO:0098569"}


id: FYPO:0002340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of DNA recombination is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320"],"is_obsolete":false,"name":"decreased DNA recombination during vegetative growth","synonyms":[{"name":"decreased DNA recombination during mitotic cell cycle","type":"related"},{"name":"decreased DNA recombination frequency during vegetative growth","type":"exact"},{"name":"decreased DNA recombination rate during vegetative growth","type":"related"},{"name":"decreased recombination during vegetative growth","type":"exact"},{"name":"reduced DNA recombination during vegetative growth","type":"exact"}],"termid":"FYPO:0002340"}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: GO:0000153
data:
  {"annotated_genes":["SJAG_01709","SJAG_01051","SJAG_03841","SJAG_03345","SJAG_01134","SJAG_05274","SJAG_04612","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84997,100220,103038,112276,100684,99400,104880,108213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex found in the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_04612":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000153","terms_by_termid":{"GO:0000836":null}}


id: PBO:0059952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 38","termid":"PBO:0059952"}


id: PBO:0064979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 35, pseudogene","termid":"PBO:0064979"}


id: SO:0000798
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified by manipulations in vitro.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_transposable_element","synonyms":[{"name":"engineered transposable element","type":"exact"}],"termid":"SO:0000798"}


id: SO:0001024
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A haplotype is one of a set of coexisting sequence variants of a haplotype block.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"haplotype_block","termid":"SO:0000355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haplotype","secondary_identifiers":["http://en.wikipedia.org/wiki/Haplotype"],"termid":"SO:0001024"}


id: GO:0016049
data:
  {"annotated_genes":["SJAG_03486","SJAG_01456","SJAG_02169","SJAG_00244","SJAG_03581","SJAG_04724","SJAG_03705","SJAG_00216","SJAG_02392","SJAG_04322","SJAG_02723","SJAG_01017","SJAG_02838","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85585,91428,90187],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[83680,89640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[106042,111637,112995,95232,102224,83838,98914],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[86424],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[102028],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[110238],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"growth","termid":"GO:0040007"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048591"],"synonyms":[{"name":"cell expansion","type":"related"},{"name":"cellular growth","type":"exact"},{"name":"growth of cell","type":"exact"},{"name":"metabolic process resulting in cell growth","type":"related"},{"name":"metabolism resulting in cell growth","type":"related"},{"name":"non-developmental cell growth","type":"related"},{"name":"non-developmental growth of a unicellular organism","type":"related"}],"termid":"GO:0016049","terms_by_termid":{"GO:0030307":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null}}


id: GO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of cell adhesion molecules that bind to carbohydrate via a lectin-like domain; integral membrane glycoproteins.","definition_xrefs":["ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete selectin (obsolete GO:0008337)","synonyms":[{"name":"selectin","type":"exact"}],"termid":"GO:0008337"}


id: PBO:0030503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nocodazole","termid":"PBO:0030503"}


id: GO:0031928
data:
  {"annotated_genes":["SJAG_03652","SJAG_03808","SJAG_02962","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85868,85869,112586,113812],"is_not":false,"summary":null,"term":"GO:0031928"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxine from one side of a membrane to the other. Pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pyridoxine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxine transporter activity","type":"broad"}],"termid":"GO:0031928","terms_by_termid":{"GO:0031928":null}}


id: PR:Q9UTQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spc2 gene.","definition_xrefs":["UniProtKB:Q9UTQ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit spc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.04c","synonyms":[{"name":"Spom972h-spc2","type":"exact"},{"name":"microsomal signal peptidase subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ9"}


id: PBO:0039335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha kinase 2","termid":"PBO:0039335"}


id: GO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol = 3-hydroxypropanal + H2O.","definition_xrefs":["PMID:18307109","EC:4.2.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"glycerol dehydratase activity","secondary_identifiers":["MetaCyc:GLYCEROL-DEHYDRATASE-RXN","RHEA:19765"],"synonyms":[{"name":"glycerol dehydrase activity","type":"related"},{"name":"glycerol hydro-lyase (3-hydroxypropanal-forming)","type":"related"},{"name":"glycerol hydro-lyase activity","type":"related"}],"termid":"GO:0046405"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: GO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-D-glucuronoside + H2O = an alcohol + D-glucuronate.","definition_xrefs":["EC:3.2.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-glucuronidase activity","secondary_identifiers":["RHEA:20005","MetaCyc:3.2.1.139-RXN"],"synonyms":[{"name":"alpha-D-glucosiduronate glucuronohydrolase activity","type":"related"},{"name":"alpha-glucosiduronase activity","type":"related"}],"termid":"GO:0046559"}


id: GO:0031163
data:
  {"annotated_genes":["SJAG_02457","SJAG_04014","SJAG_02866","SJAG_00040","SJAG_00066","SJAG_02994","SJAG_01063","SJAG_03862","SJAG_04016","SJAG_02895","SJAG_02497","SJAG_01238","SJAG_01417","SJAG_00186","SJAG_04397","SJAG_00894","SJAG_03701","SJAG_02495","SJAG_00532","SJAG_00455","SJAG_00972","SJAG_03222","SJAG_01615","SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77087,93802,97093,88811,88583,98540,102252,104994,105181,109100,94762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[112948,109935,97094,88414,104569,94464,105168,83996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"},{"annotations":[70411,77792,85015,78087,71565,71676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016226"}]},"cv_name":"biological_process","definition":"The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:pde","GOC:vw","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02495":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"metallo-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"metal-sulfur cluster assembly","type":"exact"},{"name":"metallo-sulfur cluster biosynthesis","type":"related"},{"name":"metallo-sulphur cluster assembly","type":"exact"}],"termid":"GO:0031163","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: SO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is part of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_regulatory_region","synonyms":[{"name":"intronic regulatory region","type":"exact"}],"termid":"SO:0001492"}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: PBO:0110364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosomal polycystin 1 interacting protein","termid":"PBO:0110364"}


id: PBO:0046544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 1, envelope","termid":"PBO:0046544"}


id: FYPO:0007080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and occurs as part of the first meiotic nuclear division, is abnormal.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abnormal initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abnormal initial mitotic SPB separation in meiosis I","type":"exact"}],"termid":"FYPO:0007080"}


id: GO:0060136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"},{"relation_name":"part_of","term_name":"embryo development ending in birth or egg hatching","termid":"GO:0009792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic process involved in female pregnancy","termid":"GO:0060136"}


id: PBO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyl transferase A subunit (predicted)","termid":"PBO:0002361"}


id: PBO:0048145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 1","termid":"PBO:0048145"}


id: GO:0090555
data:
  {"annotated_genes":["SJAG_01945","SJAG_00669","SJAG_01731","SJAG_02897","SJAG_05209"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90041,93485,94982,95688,107740],"is_not":false,"summary":null,"term":"GO:0090555"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["RHEA:36440","GOC:ab","PMID:16452632","PMID:20043909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"phosphatidylethanolamine flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:66132"],"synonyms":[{"name":"ATP-dependent phosphatidylethanolamine transporter activity","type":"related"},{"name":"ATPase-coupled phosphatidylethanolamine transporter activity","type":"broad"},{"name":"phosphatidylethanolamine flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"},{"name":"phosphatidylethanolamine-translocating ATPase activity","type":"related"}],"termid":"GO:0090555","terms_by_termid":{"GO:0090555":null}}


id: GO:0014062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of serotonin secretion","synonyms":[{"name":"regulation of serotonin release","type":"related"}],"termid":"GO:0014062"}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: PBO:0056142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor family member 3","termid":"PBO:0056142"}


id: FYPO:0007442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"normal protein localization to ER membrane","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007442"}


id: PBO:0081772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 704","termid":"PBO:0081772"}


id: GO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an adaptive immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune response","synonyms":[{"name":"activation of adaptive immune response","type":"narrow"},{"name":"stimulation of adaptive immune response","type":"narrow"},{"name":"up regulation of adaptive immune response","type":"exact"},{"name":"up-regulation of adaptive immune response","type":"exact"},{"name":"upregulation of adaptive immune response","type":"exact"}],"termid":"GO:0002821"}


id: PBO:0049852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 1","termid":"PBO:0049852"}


id: PBO:0076472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TANK antisense RNA 1","termid":"PBO:0076472"}


id: GO:0044775
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcomplex of the DNA polymerase III holoenzyme which is responsible for tethering the catalytic subunit of DNA polymerase to DNA during high-speed replication. The complex is homodimeric in prokaryotes, and homotrimeric in other species.","definition_xrefs":["GOC:jl","UniProt:O73947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase processivity factor complex","termid":"GO:0044796"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, beta sliding clamp processivity factor complex","termid":"GO:0044775"}


id: PBO:0029104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_lysine_level","termid":"PBO:0029104"}


id: GO:0046415
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019628"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"urate metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"urate metabolism","type":"exact"}],"termid":"GO:0046415","terms_by_termid":{"GO:0019628":null}}


id: GO:0044633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of complement activation, via the alternative pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, alternative pathway in another organism (obsolete GO:0044633)","synonyms":[{"name":"modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"regulation of complement activation, alternative pathway in other organism","type":"related"}],"termid":"GO:0044633"}


id: SO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic joining region which closely resembles a known functional imunoglobulin joining gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_pseudogene","synonyms":[{"name":"IG J pseudogene","type":"exact"},{"name":"IG joining pseudogene","type":"exact"},{"name":"IG_joining_pseudogene","type":"exact"},{"name":"Immunoglobulin Joining Pseudogene","type":"exact"},{"name":"Immunoglobulin_Joining_Pseudogene","type":"exact"}],"termid":"SO:0002101"}


id: PBO:0080429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 13","termid":"PBO:0080429"}


id: PBO:0030164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_sporulation","termid":"PBO:0030164"}


id: PBO:0079704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding protein 1","termid":"PBO:0079704"}


id: FYPO:0006397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules become detached from the nuclear envelope (NE). Normally, some cytoplasmic microtubules are nucleated at the NE and remain attached.","definition_xrefs":["PomBase:mah","PMID:16481403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic microtubules detached from nuclear envelope","synonyms":[{"name":"cytoplasmic microtubules detached from nuclear envelope during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules detached from nuclear envelope during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules dissociated from nuclear envelope","type":"exact"}],"termid":"FYPO:0006397"}


id: GO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that activates or increases the frequency, rate or extent of host catalytic activity.","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host catalytic activity (obsolete GO:0039712)","synonyms":[{"name":"induction by virus of host enzyme activity","type":"exact"}],"termid":"GO:0039712"}


id: GO:0008269
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two molecules of the JAK signal transduction pathway, permitting them to function in a coordinated way.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"JAK pathway signal transduction adaptor activity","termid":"GO:0008269"}


id: PBO:0066197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM15 antisense RNA 1","termid":"PBO:0066197"}


id: PBO:0086652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole, while HA-tagged protein is found in the soluble fraction, suggesting cytoplasmic localization","termid":"PBO:0086652"}


id: PBO:0052985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3 pseudogene 1","termid":"PBO:0052985"}


id: GO:1900290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:1900288"},{"relation_name":"positively_regulates","term_name":"coenzyme F420-dependent bicyclic nitroimidazole catabolic process","termid":"GO:0052799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","synonyms":[{"name":"activation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole breakdown","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole catabolism","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroimidazole reduction","type":"narrow"},{"name":"activation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"positive regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"up-regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"up-regulation of coenzyme F420-dependent nitroreductase activity","type":"related"},{"name":"upregulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole breakdown","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole catabolism","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroimidazole reduction","type":"exact"},{"name":"upregulation of coenzyme F420-dependent nitroreductase activity","type":"related"}],"termid":"GO:1900290"}


id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: SO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified cytosine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_cytosine","termid":"SO:0001963"}


id: GO:0070178
data:
  {"annotated_genes":["SJAG_04827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid.","definition_xrefs":["CHEBI:16523","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"D-serine metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"D-serine metabolism","type":"exact"}],"termid":"GO:0070178","terms_by_termid":{"GO:0036088":null}}


id: PBO:0076598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 20","termid":"PBO:0076598"}


id: GO:0021795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the cerebral cortex.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex cell migration","termid":"GO:0021795"}


id: PBO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JRKL antisense RNA 1","termid":"PBO:0052033"}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: GO:0052725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:20940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 6-kinase activity","secondary_identifiers":["Reactome:R-HSA-2267372","EC:2.7.1.159","Reactome:R-HSA-1855197","MetaCyc:2.7.1.133-RXN"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"IP3 6-kinase activity","type":"broad"},{"name":"Ins(1,3,4)P3 6-kinase activity","type":"related"},{"name":"inositol 1,3,4-trisphosphate 6-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 6-kinase activity","type":"broad"},{"name":"ins(1,3,4)P(3) 6-kinase activity","type":"related"}],"termid":"GO:0052725"}


id: PBO:0062866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 4","termid":"PBO:0062866"}


id: FYPO:0004231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of methylated histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"abnormal methylated histone binding","termid":"FYPO:0004231"}


id: PBO:0002254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Pta1","termid":"PBO:0002254"}


id: FYPO:0003074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to pericentric heterochromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromeric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localisation to pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centric heterochromatin during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear centromeric heterochromatin","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during mitotic cell cycle during mitotic cell cycle during mitotic cell cycle","type":"related"},{"name":"protein localization to centromeric heterochromatin abolished during vegetative growth","type":"exact"},{"name":"protein localization to pericentric heterochromatin abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003074"}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: GO:0050389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucurono-6,2-lactone + H2O = D-glucuronate.","definition_xrefs":["EC:3.1.1.19","MetaCyc:URONOLACTONASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"uronolactonase activity","secondary_identifiers":["RHEA:13337"],"synonyms":[{"name":"D-glucurono-6,2-lactone lactonohydrolase activity","type":"related"},{"name":"glucuronolactonase activity","type":"related"}],"termid":"GO:0050389"}


id: PBO:0089549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Vid27 family, conserved in fungi and plants","termid":"PBO:0089549"}


id: PR:O74793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.11c","synonyms":[{"name":"Spom972h-SPBC26H8.11c","type":"exact"}],"termid":"PR:O74793"}


id: PBO:0031869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dopey family protein Dop1","termid":"PBO:0031869"}


id: PR:O13863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B1.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C1B1.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.02c","synonyms":[{"name":"Spom972h-SPAC1B1.02c","type":"exact"}],"termid":"PR:O13863"}


id: GO:0019600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in toluene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation","termid":"GO:0019600"}


id: PBO:0015233
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer","termid":"PBO:0015233"}


id: PR:P87175
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-(apurinic or apyrimidinic site) lyase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02802","PANTHER:PTHR22748:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) lyase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.10","secondary_identifiers":["UniProtKB:P87175"],"synonyms":[{"name":"AP endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-APEX2","type":"exact"},{"name":"apurinic-apyrimidinic endonuclease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87175"}


id: PBO:0017075
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structures of acceptor stem and anticodon/intron loop of substrate tRNA crucial for RNaseP activity","termid":"PBO:0017075"}


id: PBO:0089200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family","termid":"PBO:0089200"}


id: PBO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter Pet3","termid":"PBO:0017812"}


id: GO:0031085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps1 and Hps4 proteins.","definition_xrefs":["PMID:12756248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BLOC-3 complex","termid":"GO:0031085"}


id: PBO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein (predicted)","termid":"PBO:0000334"}


id: GO:0102640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: paspalicine + O2 + NADPH + H+ = paspalinine + NADP + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"paspalinine synthase activity","secondary_identifiers":["MetaCyc:RXN-15738"],"termid":"GO:0102640"}


id: PBO:0079563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 1 like","termid":"PBO:0079563"}


id: PBO:0053575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 596","termid":"PBO:0053575"}


id: GO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron over time, that contributes to the development of the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron development involved in amphid sensory organ development","termid":"GO:0003388"}


id: GO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An Isw1 complex that binds DNA and has nucleosome-stimulated ATPase activity. In S. cerevisiae, contains an Isw1p ATPase subunit in complex with Ioc2p and Ioc4p.","definition_xrefs":["GOC:jd","PMID:12482963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Isw1 complex","termid":"GO:0016587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"Isw1b complex","termid":"GO:0036437"}


id: PBO:0063077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: PBO:0090994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase/kynurenine-oxoglutarate transaminase","termid":"PBO:0090994"}


id: PBO:0068077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 383","termid":"PBO:0068077"}


id: GO:0003938
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74298],"is_not":false,"summary":null,"term":"GO:0003938"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"IMP dehydrogenase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:11708","MetaCyc:IMP-DEHYDROG-RXN","Reactome:R-HSA-73794","Reactome:R-HSA-9748945"],"synonyms":[{"name":"IMP oxidoreductase activity","type":"related"},{"name":"IMP:NAD+ oxidoreductase activity","type":"related"},{"name":"inosinate dehydrogenase activity","type":"related"},{"name":"inosine 5'-monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate oxidoreductase activity","type":"related"},{"name":"inosine-5'-phosphate dehydrogenase activity","type":"related"},{"name":"inosinic acid dehydrogenase activity","type":"related"}],"termid":"GO:0003938","terms_by_termid":{"GO:0003938":null}}


id: PBO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3B","termid":"PBO:0047739"}


id: GO:0043323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of natural killer cell degranulation","termid":"GO:0043321"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell degranulation","termid":"GO:0043320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of natural killer cell degranulation","synonyms":[{"name":"activation of natural killer cell degranulation","type":"narrow"},{"name":"positive regulation of NK cell degranulation","type":"exact"},{"name":"positive regulation of NK cell granule exocytosis","type":"exact"},{"name":"positive regulation of natural killer cell granule exocytosis","type":"exact"},{"name":"stimulation of natural killer cell degranulation","type":"narrow"},{"name":"up regulation of natural killer cell degranulation","type":"exact"},{"name":"up-regulation of natural killer cell degranulation","type":"exact"},{"name":"upregulation of natural killer cell degranulation","type":"exact"}],"termid":"GO:0043323"}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: SO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_methylcytidine","secondary_identifiers":["RNAMOD:082"],"synonyms":[{"name":"N4 methylcytidine","type":"exact"},{"name":"N4-methylcytidine","type":"exact"},{"name":"m4C","type":"exact"}],"termid":"SO:0001290"}


id: PBO:0081483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 365","termid":"PBO:0081483"}


id: PBO:0029657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029657"}


id: PBO:0051274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 5","termid":"PBO:0051274"}


id: GO:0021581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the medulla oblongata. This process pertains to the physical shaping of a rudimentary structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"hindbrain structural organization","termid":"GO:0021577"},{"relation_name":"part_of","term_name":"medulla oblongata morphogenesis","termid":"GO:0021579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata structural organization","synonyms":[{"name":"medulla oblongata structural organisation","type":"exact"},{"name":"medulla structural maturation","type":"related"},{"name":"myelencephalon structural maturation","type":"related"}],"termid":"GO:0021581"}


id: GO:0033068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["PMID:17298179","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"macrolide biosynthetic process","synonyms":[{"name":"macrolide anabolism","type":"exact"},{"name":"macrolide biosynthesis","type":"exact"},{"name":"macrolide formation","type":"exact"},{"name":"macrolide synthesis","type":"exact"}],"termid":"GO:0033068"}


id: PBO:0056995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34b","termid":"PBO:0056995"}


id: GO:0005078
data:
  {"annotated_genes":["SJAG_03625","SJAG_04503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70398,95465],"is_not":false,"summary":null,"term":"GO:0005078"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. Binds multiple kinases of the MAPKKK cascade, and also upstream signaling proteins, permitting those molecules to function in a coordinated way. Bringing together multiple enzymes and their substrates enables the signal to be transduced quickly and efficiently.","definition_xrefs":["PMID:12511654","PMID:15213240","PMID:9405336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03625":null,"SJAG_04503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"MAP-kinase scaffold activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"MAP-kinase scaffold protein activity","type":"exact"}],"termid":"GO:0005078","terms_by_termid":{"GO:0005078":null}}


id: GO:0061121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: GO:0102692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + N-benzyladenine = H+ + N-benzyl-9-(alpha-D-glucosyl)adenine + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"benzyladenine UDP glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4730"],"termid":"GO:0102692"}


id: PBO:0082931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial histidine tRNA synthetase; efficient mitochondrial localization requires both a presequence and an amino-terminal sequence; mutations in human ortholog HARS2 are associated with Perrault syndrome","termid":"PBO:0082931"}


id: FYPO:0005230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to ultraviolet light is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26493332","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of translation in response to UV","synonyms":[{"name":"normal regulation of translation in response to UV during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to UV during vegetative growth","type":"exact"},{"name":"normal regulation of translation in response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005230"}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:jl","GOC:TermGenie","PMID:21745575","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartic-type peptidase activity","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: PBO:0086967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit B of protein phosphatase 2A (PP2A); Zds1p/2p-dependent localization to cytoplasm promotes mitotic entry; localization to nucleus prevents mitotic exit; required for correct nuclear division, chromosome segregation during achiasmate meiosis; maintains nucleolar sequestration of Cdc14p in early meiosis; limits formation of PP2A-Rts1p holocomplexes to ensure timely dissolution of sister chromosome cohesion; controls phosphorylation and stability of Cln2p; homolog of mammalian B55","termid":"PBO:0086967"}


id: PBO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tim9-Tim10 complex subunit Tim9","termid":"PBO:0090573"}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: PBO:0088510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein AdoMet-dependent proline dimethyltransferase Tae1","termid":"PBO:0088510"}


id: PR:O94636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA guanosine-2'-O-methyltransferase TRM11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03774","PANTHER:PTHR13370:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(10)-N2)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.02","secondary_identifiers":["UniProtKB:O94636"],"synonyms":[{"name":"Spom972h-TRMT11","type":"exact"},{"name":"tRNA guanosine-2'-O-methyltransferase TRM11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methylase 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94636"}


id: PBO:0076222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene","termid":"PBO:0076222"}


id: PBO:0038404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of","termid":"PBO:0038404"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: PBO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031523"}


id: GO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-cassa-12,15-diene + diphosphate.","definition_xrefs":["RHEA:25532","EC:4.2.3.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-cassa-12,15-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R09119","MetaCyc:RXN-4881"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (ent-cassa-12,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034277"}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: SO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where developer information is encoded.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signature","synonyms":[{"name":"DNA signature","type":"exact"}],"termid":"SO:0001978"}


id: PBO:0086176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the normal accumulation of 25S and 5.8S rRNAs; nucleolar protein; associated with the 27SA2 pre-ribosomal particle; proposed to be involved in the biogenesis of the 60S ribosomal subunit","termid":"PBO:0086176"}


id: PBO:0028077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation","termid":"PBO:0028077"}


id: PBO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase","termid":"PBO:0089703"}


id: PBO:0071562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 28","termid":"PBO:0071562"}


id: GO:0102528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 7,8,4'-trihydroxyflavone = H+ + S-adenosyl-L-homocysteine + 7,4'-dihydroxy, 8-methoxyflavone.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"7,8,4'-trihydroxyflavone methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14658"],"termid":"GO:0102528"}


id: PBO:0085751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) in response to starvation; activated by uncharged tRNAs and the Gcn1p-Gcn20p complex; contributes to DNA damage checkpoint control","termid":"PBO:0085751"}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: PBO:0048199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha3","termid":"PBO:0048199"}


id: PR:G2TRR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C32F12.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.17","synonyms":[{"name":"Spom972h-SPBC32F12.17","type":"exact"}],"termid":"PR:G2TRR2"}


id: GO:0098516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which high humidity is detected and converted into a molecular signal.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of humidity","termid":"GO:0098513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of high humidity","termid":"GO:0098516"}


id: PR:000027543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P36631-1, Thr-173, MOD:00047|Ser-218, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ste11/Phos:(T173,S218)","pombase_gene_id":"SPBC32C12.02","synonyms":[{"name":"Spom-ste11/Phos:1","type":"exact"},{"name":"ste11/Phos:(T173,S218)","type":"exact"}],"termid":"PR:000027543"}


id: GO:0098625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + CH3SeOH => NADP+ + CH3SeH + H2O.","definition_xrefs":["PMID:11782468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylselenol reductase activity","secondary_identifiers":["Reactome:R-HSA-5263614"],"termid":"GO:0098625"}


id: PBO:0078677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 10-1","termid":"PBO:0078677"}


id: GO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter metabolic process (obsolete GO:0042133)","synonyms":[{"name":"neurotransmitter metabolism","type":"exact"}],"termid":"GO:0042133"}


id: MOD:00543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:187","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(hydroxyphenylglyoxal) arginine","synonyms":[{"name":"2HPG","type":"related"},{"name":"bis(hydroxphenylglyoxal) arginine","type":"related"}],"termid":"MOD:00543"}


id: PBO:0075353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 1","termid":"PBO:0075353"}


id: MOD:01736
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent acylated residue","synonyms":[{"name":"TMT6plex","type":"related"},{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01736"}


id: PBO:0079885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 2","termid":"PBO:0079885"}


id: PBO:0044712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11","termid":"PBO:0044712"}


id: GO:0043698
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which purines crystalize in reflective stacks. Iridosomes are synthesized in iridophore cells and are silver, gold or iridescent in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"iridosome","synonyms":[{"name":"reflecting platelet","type":"exact"}],"termid":"GO:0043698"}


id: GO:0021851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the dorsal region of the lateral ganglionic eminence. These cells give rise to embryonic interneuron precursors that will migrate tangentially to the olfactory bulb.","definition_xrefs":["PMID:12626695","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division in subpallium","termid":"GO:0021848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in dorsal lateral ganglionic eminence","termid":"GO:0021851"}


id: GO:2000809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle clustering.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle clustering","termid":"GO:2000807"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle clustering","termid":"GO:0097091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle clustering","termid":"GO:2000809"}


id: PBO:0053216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 13","termid":"PBO:0053216"}


id: PBO:0054009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1339","termid":"PBO:0054009"}


id: PBO:0074749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 108","termid":"PBO:0074749"}


id: PBO:0067372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 473, pseudogene","termid":"PBO:0067372"}


id: GO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generation of neurons","synonyms":[{"name":"neuron generation","type":"exact"}],"termid":"GO:0048699"}


id: GO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the rate of proteolysis catalyzed by a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity involved in apoptotic process","termid":"GO:0016505"},{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-205117","Reactome:R-HSA-449073"],"synonyms":[{"name":"caspase activator activity","type":"broad"}],"termid":"GO:0008656"}


id: PBO:0053498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 477","termid":"PBO:0053498"}


id: PBO:0077636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 2","termid":"PBO:0077636"}


id: GO:0034299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a spore following the marked enlargement of part of a cell before separation by a septum. Blastospores are a type of asexual spore found in some fungi, most notably the class Glomeromycota.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conidium formation","termid":"GO:0048315"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive blastospore formation","synonyms":[{"name":"blastoconidium formation","type":"exact"}],"termid":"GO:0034299"}


id: PBO:0065286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1B","termid":"PBO:0065286"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: PBO:0085343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; contains lipase specific GXSXG motif; maintains lipid droplet (LD) morphology; induced by transcription factor Rpn4p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085343"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: PBO:0051071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-18","termid":"PBO:0051071"}


id: PBO:0036260
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADEnine requiring","termid":"PBO:0036260"}


id: GO:0120045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a stereocilium in a stable functional or structural state.","definition_xrefs":["GOC:krc","PMID:27693694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stereocilium maintenance","termid":"GO:0120045"}


id: PBO:0110490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ibosomal protein L17 pseudogene 52","termid":"PBO:0110490"}


id: PBO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylethanolamine acid amidase","termid":"PBO:0060418"}


id: _global:paralogous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"homologous_to","termid":"_global:homologous_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralogous_to","termid":"_global:paralogous_to"}


id: GO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell apoptotic process that occurs upon engagement of either the B cell receptor or CD40. Engagement of either receptor, but not both, leads to expression of fas or related receptors that make the B cell susceptible to fas-ligand mediated death.","definition_xrefs":["GOC:mtg_apoptosis","PMID:11032170","GOC:tfm","PMID:19300454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced B cell apoptotic process","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated B cell apoptosis","type":"broad"},{"name":"activation-induced B cell apoptosis","type":"narrow"},{"name":"activation-induced B-cell apoptosis","type":"exact"},{"name":"activation-induced cell death of B cells","type":"exact"},{"name":"activation-induced cell death of B lymphocytes","type":"exact"},{"name":"activation-induced cell death of B-cells","type":"exact"},{"name":"activation-induced cell death of B-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0071948"}


id: PBO:0028503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0028503"}


id: GO:1901382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chorionic trophoblast cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"chorionic trophoblast cell proliferation","termid":"GO:0097360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chorionic trophoblast cell proliferation","termid":"GO:1901382"}


id: PBO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_meiotic_cell_cycle","termid":"PBO:0034570"}


id: PBO:0067263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 337, pseudogene","termid":"PBO:0067263"}


id: PR:P36618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc16 gene.","definition_xrefs":["UniProtKB:P36618","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.08c","synonyms":[{"name":"Spom972h-cdc16","type":"exact"}],"termid":"PR:P36618"}


id: PBO:0068915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 158, pseudogene","termid":"PBO:0068915"}


id: CHEBI:52289
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wortmannin","termid":"CHEBI:52289"}


id: GO:1901340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of store-operated calcium channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium channel activity","termid":"GO:1901339"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of store-operated calcium channel activity","synonyms":[{"name":"down regulation of store-operated calcium channel activity","type":"exact"},{"name":"down-regulation of store-operated calcium channel activity","type":"exact"},{"name":"downregulation of store-operated calcium channel activity","type":"exact"},{"name":"inhibition of store-operated calcium channel activity","type":"narrow"}],"termid":"GO:1901340"}


id: PBO:0082816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal protein with similarity to zinc carboxypeptidases; in some strains required for normal cell wall assembly","termid":"PBO:0082816"}


id: GO:2000372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA topoisomerase (ATP-hydrolyzing) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"},{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of DNA topoisomerase (ATP-hydrolyzing) activity","termid":"GO:2000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA topoisomerase (ATP-hydrolyzing) activity","synonyms":[{"name":"negative regulation of DNA topoisomerase (ATP-hydrolysing)","type":"related"},{"name":"negative regulation of DNA topoisomerase II","type":"related"},{"name":"negative regulation of DNA topoisomerase IV activity","type":"exact"},{"name":"negative regulation of DNA topoisomerase type II activity","type":"exact"},{"name":"negative regulation of deoxyribonucleate topoisomerase","type":"related"},{"name":"negative regulation of deoxyribonucleic topoisomerase activity","type":"exact"},{"name":"negative regulation of topoisomerase","type":"related"},{"name":"negative regulation of topoisomerase II","type":"exact"},{"name":"negative regulation of type II DNA topoisomerase activity","type":"exact"}],"termid":"GO:2000372"}


id: FYPO:0001284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"phosphatidylserine absent from cell","synonyms":[{"name":"PS absent from cell","type":"exact"},{"name":"phosphatidyl-L-serine absent from cell","type":"exact"},{"name":"phosphatidylserine absent from cell during mitotic cell cycle","type":"related"},{"name":"phosphatidylserine absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001284"}


id: PBO:0056140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LZTS1 antisense RNA 1","termid":"PBO:0056140"}


id: GO:0120094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of crotonylation of a lysine residue in a protein.","definition_xrefs":["PMID:28803779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine crotonylation","termid":"GO:0120093"},{"relation_name":"negatively_regulates","term_name":"peptidyl-lysine crotonylation","termid":"GO:0140066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-lysine crotonylation","termid":"GO:0120094"}


id: PBO:0050527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin protein 1 binding protein 3","termid":"PBO:0050527"}


id: PBO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor Sac32 (predicted)","termid":"PBO:0034819"}


id: GO:2000205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ribosomal subunit export from nucleus","termid":"GO:2000202"},{"relation_name":"is_a","term_name":"regulation of ribosomal large subunit export from nucleus","termid":"GO:2000203"},{"relation_name":"positively_regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"positive regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"positive regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"positive regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"positive regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000205"}


id: GO:0044170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host smooth ER has no ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell smooth endoplasmic reticulum","synonyms":[{"name":"host smooth endoplasmic reticulum","type":"exact"}],"termid":"GO:0044170"}


id: PBO:0050397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 2","termid":"PBO:0050397"}


id: GO:0005828
data:
  {"annotated_genes":["SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"}]},"cv_name":"cellular_component","definition":"Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"kinetochore microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pole-to-kinetochore microtubule","type":"exact"}],"termid":"GO:0005828","terms_by_termid":{"GO:1990941":null}}


id: GO:0071951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of methionine charged on a tRNA(fMet) to N-formyl-methionine-tRNA(fMet).","definition_xrefs":["PMID:5337045","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"conversion of methionyl-tRNA to N-formyl-methionyl-tRNA","termid":"GO:0071951"}


id: GO:1900604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tensidol A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"tensidol A metabolic process","termid":"GO:1900603"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"tensidol A catabolic process","synonyms":[{"name":"tensidol A breakdown","type":"exact"},{"name":"tensidol A catabolism","type":"exact"},{"name":"tensidol A degradation","type":"exact"}],"termid":"GO:1900604"}


id: PBO:0042533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5R2 antisense RNA 1","termid":"PBO:0042533"}


id: PBO:0074226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC45A4 antisense RNA 1","termid":"PBO:0074226"}


id: PBO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3","termid":"PBO:0050376"}


id: FYECO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition pertaining to the medium in which cells are grown.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping growth medium","termid":"FYECO:0000009"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: PBO:0054944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2358","termid":"PBO:0054944"}


id: PBO:0063351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNX4 divergent transcript","termid":"PBO:0063351"}


id: GO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"mast cell activation","termid":"GO:0045576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation involved in immune response","synonyms":[{"name":"mast cell activation during immune response","type":"related"}],"termid":"GO:0002279"}


id: PBO:0031616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_transposition","termid":"PBO:0031616"}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87793,105207],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["PMID:21208191","PMID:12032089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016891"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN","EC:3.1.26.11"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


id: PBO:0073868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 4","termid":"PBO:0073868"}


id: PBO:0031257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_wall_biogenesis","termid":"PBO:0031257"}


id: FYPO:0001984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"protein absent from cell","termid":"FYPO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein absent from cell during vegetative growth","synonyms":[{"name":"protein absent from cell during mitotic cell cycle","type":"related"},{"name":"undetectable cellular protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0001984"}


id: PBO:0055666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 2","termid":"PBO:0055666"}


id: FYPO:0004053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ultraviolet light. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to UV (obsolete FYPO:0004053)","synonyms":[{"name":"cut during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to UV during vegetative growth","type":"exact"},{"name":"cut during cellular response to ultraviolet light","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to UV","type":"exact"}],"termid":"FYPO:0004053"}


id: GO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligosaccharide-diphosphodolichol = dolichol-phosphate + oligosaccharide phosphate.","definition_xrefs":["EC:3.6.1.44","MetaCyc:3.6.1.44-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide-diphosphodolichol diphosphatase activity","secondary_identifiers":["RHEA:15205"],"synonyms":[{"name":"oligosaccharide-diphosphodolichol phosphodolichohydrolase activity","type":"related"},{"name":"oligosaccharide-diphosphodolichol pyrophosphatase activity","type":"exact"}],"termid":"GO:0047430"}


id: PATO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being upright in position or posture.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erect","synonyms":[{"name":"upright","type":"exact"}],"termid":"PATO:0000622"}


id: GO:0047704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + taurolithocholate = adenosine 3',5'-bisphosphate + taurolithocholate sulfate.","definition_xrefs":["EC:2.8.2.14","MetaCyc:BILE-SALT-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"bile-salt sulfotransferase activity","secondary_identifiers":["RHEA:14013"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:glycolithocholate sulfotransferase activity","type":"related"},{"name":"BAST I activity","type":"narrow"},{"name":"bile acid sulfotransferase I activity","type":"narrow"},{"name":"bile acid:3'-phosphoadenosine-5'-phosphosulfate sulfotransferase activity","type":"related"},{"name":"bile salt:3'phosphoadenosine-5'-phosphosulfate:sulfotransferase activity","type":"related"},{"name":"bile-salt sulphotransferase activity","type":"exact"},{"name":"glycolithocholate sulfotransferase activity","type":"narrow"}],"termid":"GO:0047704"}


id: PBO:0065187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospero homeobox 1","termid":"PBO:0065187"}


id: PBO:0049382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIC subunit 4","termid":"PBO:0049382"}


id: PBO:0029055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029055"}


id: PATO:0002377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being not filed with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uninflated","termid":"PATO:0002377"}


id: GO:0009828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events causing chemical and structural alterations of an existing cellulose and pectin-containing cell wall that results in greater extensibility of the wall. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall loosening","synonyms":[{"name":"cellulose and pectin-containing cell wall loosening","type":"exact"}],"termid":"GO:0009828"}


id: PBO:0090334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane guanine and adenine transmembrane transporter","termid":"PBO:0090334"}


id: PBO:0078889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 2-1","termid":"PBO:0078889"}


id: GO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of streptomycin, a commonly used antibiotic in cell culture media; it acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"streptomycin metabolic process","termid":"GO:0046343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"streptomycin biosynthetic process","synonyms":[{"name":"streptomycin anabolism","type":"exact"},{"name":"streptomycin biosynthesis","type":"exact"},{"name":"streptomycin formation","type":"exact"},{"name":"streptomycin synthesis","type":"exact"}],"termid":"GO:0019872"}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: GO:0061074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural retina development","termid":"GO:0061074"}


id: GO:0009203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside triphosphate catabolic process","synonyms":[{"name":"ribonucleoside triphosphate breakdown","type":"exact"},{"name":"ribonucleoside triphosphate catabolism","type":"exact"},{"name":"ribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009203"}


id: GO:0004711
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112256],"is_not":false,"summary":null,"term":"GO:0004711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ribosomal protein S6 + ATP = ribosomal protein S6 phosphate + ATP.","definition_xrefs":["GOC:mah","PMID:9822608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0140096","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"ribosomal protein S6 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004711","terms_by_termid":{"GO:0004711":null}}


id: PBO:0002111
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin B Six Uptake","termid":"PBO:0002111"}


id: PBO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 17","termid":"PBO:0045159"}


id: FYPO:0000747
data:
  {"alleles_by_uniquename":{"SJAG_01081:allele-1":{"allele_type":"nonsense_mutation","description":"S427>stop","gene_uniquename":"SJAG_01081","name":"ade6-domE","uniquename":"SJAG_01081:allele-1"},"SJAG_01081:allele-2":{"allele_type":"amino_acid_mutation","description":"Q262A","gene_uniquename":"SJAG_01081","name":"ade6-domK","uniquename":"SJAG_01081:allele-2"},"SJAG_01081:allele-3":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01081","name":"ade6delta","uniquename":"SJAG_01081:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114210,114211,114212,114659],"is_not":false,"summary":null,"term":"FYPO:0000747"}]},"cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize adenine, and therefore requires adenine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":3,"genotypes_by_uniquename":{"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domE(S427>stop)","display_uniquename":"ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-1","expression":"Not assayed or wild type"}]}]},"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ade6-domK(Q262A aa)","display_uniquename":"ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-2","expression":"Not assayed or wild type"}]}]},"ade6delta":{"display_name":"ade6delta","display_uniquename":"ade6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01081:allele-3","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for adenine","references_by_uniquename":{"PMID:19330769":null,"PMID:21905090":null},"single_locus_annotated_genes":["SJAG_01081"],"single_locus_genotype_uniquenames":["ade6-domK-Q262A-amino_acid_mutation-expression-not_assayed_or_wild_type","ade6delta","ade6-domE-S427>stop-nonsense_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"adenine auxotrophy","type":"exact"},{"name":"growth auxotrophic for adenine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for adenine during vegetative growth","type":"exact"}],"termid":"FYPO:0000747","terms_by_termid":{"FYPO:0000747":null}}


id: PBO:0047341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillin 2","termid":"PBO:0047341"}


id: PBO:0071914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 53","termid":"PBO:0071914"}


id: FYPO:0001130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to nucleus during vegetative growth","synonyms":[{"name":"increased protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"increased protein localization to nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001130"}


id: GO:0031709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gastrin-releasing peptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"gastrin-releasing peptide receptor binding","synonyms":[{"name":"GRP receptor binding","type":"exact"},{"name":"gastrin-releasing peptide receptor ligand","type":"narrow"}],"termid":"GO:0031709"}


id: SO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mobile genetic elements that contribute to rapid changes in virulence potential. They are present on the genomes of pathogenic strains but absent from the genomes of non pathogenic members of the same or related species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathogenic_island","synonyms":[{"name":"pathogenic island","type":"exact"}],"termid":"SO:0000773"}


id: GO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of intermediate filaments by the addition of component monomers to a filament. Polymerization of intermediate filament proteins results from interactions among several distinct binding sites on the constituent proteins. Nuclear lamin head-to-tail polymers arise from one such interaction. Deletion analysis localized the binding sites to the ends of the rod domain that are highly conserved among all intermediate filament proteins. Data indicate that one type of interaction in intermediate filament protein polymerization is the longitudinal binding of dimers via the conserved end segments of the coiled-coil rod domain.","definition_xrefs":["PMID:8776884","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament polymerization or depolymerization","termid":"GO:0045105"},{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"intermediate filament polymerization","termid":"GO:0045107"}


id: PR:Q09751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lactoylglutathione lyase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10374:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactoylglutathione lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.12c","secondary_identifiers":["UniProtKB:Q09751"],"synonyms":[{"name":"Aldoketomutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Glx I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Methylglyoxalase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-D-lactoylglutathione methylglyoxal lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC12C2.12c","type":"related"},{"name":"Spom972h-GLO1","type":"exact"},{"name":"glyoxalase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ketone-aldehyde mutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09751"}


id: PBO:0069440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 705, pseudogene","termid":"PBO:0069440"}


id: GO:0051876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules within a cell towards the cell periphery.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"pigment granule dispersal","termid":"GO:0051876"}


id: PBO:0080324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PBO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit (predicted)","termid":"PBO:0001554"}


id: GO:0006722
data:
  {"annotated_genes":["SJAG_00624","SJAG_03360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84490,66560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016104"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triterpenoid compounds, terpenoids with six isoprene units.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_03360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triterpenoid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"triterpene metabolic process","type":"narrow"},{"name":"triterpene metabolism","type":"narrow"},{"name":"triterpenoid metabolism","type":"exact"}],"termid":"GO:0006722","terms_by_termid":{"GO:0016104":null}}


id: GO:0000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis where the methylase specifies the site that becomes methylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme-directed rRNA 2'-O-methylation (obsolete GO:0000453)","termid":"GO:0000453"}


id: MOD:00066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-formylglycine.","definition_xrefs":["PubMed:5139483","RESID:AA0057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formylglycine","synonyms":[{"name":"(formylamino)acetic acid","type":"exact"},{"name":"(formylamino)ethanoic acid","type":"exact"},{"name":"(formylazanyl)ethanoic acid","type":"exact"},{"name":"2-formamidoacetic acid","type":"exact"},{"name":"2-formamidoethanoic acid","type":"exact"},{"name":"MOD_RES N-formylglycine","type":"exact"},{"name":"N(alpha)-formylglycine","type":"exact"},{"name":"N-formylated glycine","type":"exact"},{"name":"N-formylglycine","type":"exact"},{"name":"NFoGly","type":"exact"}],"termid":"MOD:00066"}


id: PATO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having medium brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark pale pink","secondary_identifiers":["PATO:0001279"],"synonyms":[{"name":"bright pink ","type":"related"}],"termid":"PATO:0001280"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: PBO:0040981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1 like 1","termid":"PBO:0040981"}


id: GO:0005796
data:
  {"annotated_genes":["SJAG_00751","SJAG_02495","SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97639,109932,112741],"is_not":false,"summary":null,"term":"GO:0005796"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00751":null,"SJAG_02495":null,"SJAG_04528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi apparatus lumen","type":"exact"}],"termid":"GO:0005796","terms_by_termid":{"GO:0005796":null}}


id: FYECO:0000145
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing maltose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose MM","synonyms":[{"name":"maltose minimal medium","type":"exact"}],"termid":"FYECO:0000145"}


id: GO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lamin/chromatin binding (obsolete GO:0003683)","synonyms":[{"name":"lamin/chromatin binding","type":"exact"}],"termid":"GO:0003683"}


id: PBO:0059852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5","termid":"PBO:0059852"}


id: GO:0102893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + betanidin = H+ + gomphrenin I + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"betanidin 6-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8480"],"termid":"GO:0102893"}


id: GO:0008660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + H2O = 2-oxobutanate + NH4.","definition_xrefs":["EC:3.5.99.7","RHEA:16933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate deaminase activity","secondary_identifiers":["UM-BBD_reactionID:r0357","MetaCyc:4.1.99.4-RXN","GO:0018806","KEGG_REACTION:R00997"],"synonyms":[{"name":"1-aminocyclopropane carboxylic acid deaminase activity","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate aminohydrolase (isomerizing)","type":"related"},{"name":"1-aminocyclopropane-1-carboxylate endolyase (deaminating) activity","type":"related"},{"name":"ACC deaminase activity","type":"related"}],"termid":"GO:0008660"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: PR:O94322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C725.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.03","synonyms":[{"name":"Spom972h-SPBC725.03","type":"exact"}],"termid":"PR:O94322"}


id: PBO:0028044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_cytoplasmic_microtubule_polymerization","termid":"PBO:0028044"}


id: GO:2000510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"positively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"}


id: PBO:0081593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 518B","termid":"PBO:0081593"}


id: PBO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEZF1 antisense RNA 1","termid":"PBO:0047519"}


id: PR:Q10451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr5 gene.","definition_xrefs":["UniProtKB:Q10451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.01","synonyms":[{"name":"Spom972h-ppr5","type":"exact"}],"termid":"PR:Q10451"}


id: PBO:0066202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 3","termid":"PBO:0066202"}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: FYPO:0002923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is normal (i.e. indistinguishable from wild type). Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"normal histone H2B conserved C-terminal lysine ubiquitination during vegetative growth","type":"exact"},{"name":"normal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002923"}


id: GO:0008509
data:
  {"annotated_genes":["SJAG_02463","SJAG_01168","SJAG_01973","SJAG_01941","SJAG_03401","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61797,65932],"is_not":false,"summary":null,"term":"GO:0008509"},{"annotations":[70535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[77783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[101091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[71622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a negatively charged ion from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","GOC:dgf","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"monoatomic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-166214"],"synonyms":[{"name":"anion transmembrane transporter activity","type":"broad"},{"name":"anion transporter activity","type":"exact"}],"termid":"GO:0008509","terms_by_termid":{"GO:0005254":null,"GO:0008308":null,"GO:0008509":null,"GO:0015379":null,"GO:1903425":null}}


id: PBO:0078401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 11-1","termid":"PBO:0078401"}


id: GO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, alpha-beta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta intraepithelial T cell differentiation","termid":"GO:0002299"},{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, alpha-beta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, alpha-beta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002301"}


id: FYPO:0007864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or both poles of the meiotic spindle does not occur during the first meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle pole during meiosis I","synonyms":[{"name":"abolished protein localisation to meiotic spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localisation to spindle pole during meiosis I","type":"exact"},{"name":"abolished protein localization to meiosis I spindle pole","type":"exact"},{"name":"abolished protein localization to spindle pole during first meiotic nuclear division","type":"exact"},{"name":"protein localization to meiotic spindle pole during meiosis I abolished","type":"exact"}],"termid":"FYPO:0007864"}


id: GO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TDP, ribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"TDP metabolic process","synonyms":[{"name":"TDP metabolism","type":"exact"}],"termid":"GO:0046043"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: PBO:0029468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glucose_binding","termid":"PBO:0029468"}


id: PATO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an bearer by virtue of how that bearer interacts with radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation quality","termid":"PATO:0001739"}


id: GO:2001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"}


id: PBO:0042021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 78","termid":"PBO:0042021"}


id: PBO:0030185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_viability","termid":"PBO:0030185"}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: PBO:0067954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 256","termid":"PBO:0067954"}


id: PBO:0072713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 2","termid":"PBO:0072713"}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87497],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + 2 H+.","definition_xrefs":["PMID:9367159","RHEA:63688","PMID:9660759","PMID:9211928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: PBO:0081732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 663, pseudogene","termid":"PBO:0081732"}


id: PBO:0073577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa family member 8","termid":"PBO:0073577"}


id: PBO:0029568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell_population_(obsolete_FYPO:0002153)","termid":"PBO:0029568"}


id: PBO:0071042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 44","termid":"PBO:0071042"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: PBO:0041465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 120","termid":"PBO:0041465"}


id: GO:0060858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances within a cell by a cellular process that begins with the formation of membrane-bounded vesicles in which the transported substances are enclosed or located in the vesicle membrane which are then targeted to, and fuse with, an acceptor membrane contributing to the shedding of a floral organ.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"vesicle-mediated transport involved in floral organ abscission","synonyms":[{"name":"membrane trafficking involved in floral organ shedding","type":"related"}],"termid":"GO:0060858"}


id: GO:2000297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synapse maturation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of synapse maturation","termid":"GO:0090128"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synapse maturation","synonyms":[{"name":"negative regulation of synaptic maturation","type":"exact"}],"termid":"GO:2000297"}


id: PBO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Iki3 (predicted)","termid":"PBO:0003363"}


id: PBO:0040350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g","termid":"PBO:0040350"}


id: GO:0006486
data:
  {"annotated_genes":["SJAG_03056","SJAG_04571","SJAG_00890","SJAG_04095","SJAG_00831","SJAG_05219","SJAG_03032","SJAG_01021","SJAG_00816","SJAG_03764","SJAG_00554","SJAG_05348","SJAG_02163","SJAG_03188","SJAG_04316","SJAG_03330","SJAG_04090","SJAG_02102","SJAG_03555","SJAG_00437","SJAG_03871","SJAG_04401","SJAG_03149","SJAG_01006","SJAG_03790","SJAG_00334","SJAG_00598","SJAG_04770","SJAG_04053","SJAG_00924","SJAG_03656","SJAG_01595","SJAG_01069","SJAG_01389","SJAG_01950","SJAG_04728","SJAG_03280","SJAG_00747","SJAG_01264","SJAG_03082","SJAG_00394","SJAG_03676","SJAG_02996","SJAG_01276","SJAG_02056","SJAG_04906","SJAG_04954","SJAG_02519","SJAG_03774","SJAG_03150","SJAG_04952","SJAG_03333","SJAG_00183","SJAG_03311","SJAG_04821","SJAG_03535","SJAG_01972","SJAG_01491","SJAG_04363","SJAG_02648","SJAG_04231","SJAG_04127","SJAG_02903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71950,74860,91295,98520,103724,109184,112920],"is_not":false,"summary":null,"term":"GO:0006486"},{"annotations":[88657,101349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044845"},{"annotations":[100391,86803,93881,104610,107795,111885,74459,106352,97754,89518,83294,71327,93933,95486,95503,98997],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[74316,76107,77083,77722,76407,105997,75433,71909,71632,75119,73166,76022,78515,83173,93329,77666,76963,99204,74788,78893,78484,71289,70728,113586,112433,78056,74120,102094,95523,70239,105991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[77929,75671,73990,104613,78108,77643,106353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[105992,78260,78057,113136,76108,105998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[99934,99205,91994,97023,113446,102095,88658,99520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule glycosylation","termid":"GO:0043413"},{"relation_name":"part_of","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00890":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03280":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03535":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein glycosylation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0065006"],"synonyms":[{"name":"protein amino acid glycosylation","type":"exact"},{"name":"protein-carbohydrate complex assembly","type":"related"}],"termid":"GO:0006486","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null,"GO:0044845":null}}


id: FYPO:0004132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal sulfite reductase activity","synonyms":[{"name":"normal sulphite reductase activity","type":"exact"}],"termid":"FYPO:0004132"}


id: FYPO:0001303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000661","FYPO:0000654","FYPO:0000002","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal myristoyl-CoA ligase activity","synonyms":[{"name":"abnormal myristoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001303"}


id: PBO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug66","termid":"PBO:0001592"}


id: FYPO:0006576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which abnormal negative regulation of the initiation of mitotic DNA replication results in one or more rounds of rereplication of the entire genome, and other features of S phase are abnormal. Rounds of replication are not correlated with G1/S phase gene expression, and origin usage is altered.","definition_xrefs":["PMID:20736315","PMID:19487461","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with abnormal S phase, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with abnormal S phase, during vegetative growth","type":"exact"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in continuous DNA synthesis","type":"related"}],"termid":"FYPO:0006576"}


id: MOD:01664
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 7'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0520","PubMed:20223990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(7-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"7'-hydroxy-L-tryptophan","type":"exact"},{"name":"7-hydroxy-L-tryptophan","type":"exact"}],"termid":"MOD:01664"}


id: SO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"satellite_DNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Satellite_DNA"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:satellite","type":"exact"},{"name":"satellite DNA","type":"exact"}],"termid":"SO:0000005"}


id: GO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane cation-transporting ATPase (obsolete GO:0004005)","synonyms":[{"name":"plasma membrane cation-transporting ATPase","type":"exact"}],"termid":"GO:0004005"}


id: CHEBI:600520
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micafungin","termid":"CHEBI:600520"}


id: PBO:0060280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 14","termid":"PBO:0060280"}


id: PBO:0041690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin pseudogene","termid":"PBO:0041690"}


id: GO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of vascular endothelial growth factor (VEGF).","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:21885851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}


id: GO:0032065
data:
  {"annotated_genes":["SJAG_00661","SJAG_01017","SJAG_01738","SJAG_00368","SJAG_00030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101969],"is_not":false,"summary":null,"term":"GO:0032065"},{"annotations":[89645,106138,100067,95667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell","termid":"GO:0032507"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cortical protein anchoring","type":"related"}],"termid":"GO:0032065","terms_by_termid":{"GO:0032065":null,"GO:0097248":null}}


id: GO:0047503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-borneol + NAD+ = (1S,4S)-camphor + H+ + NADH.","definition_xrefs":["RHEA:22128","EC:1.1.1.227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(-)-borneol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02945","MetaCyc:--BORNEOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(-)-borneol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047503"}


id: PBO:0028449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0028449"}


id: PBO:0081850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 783","termid":"PBO:0081850"}


id: PR:Q09919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.07c","synonyms":[{"name":"Spom972h-fip1","type":"exact"}],"termid":"PR:Q09919"}


id: GO:0048103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell division","synonyms":[{"name":"somatic stem cell renewal","type":"exact"}],"termid":"GO:0048103"}


id: GO:0016894
data:
  {"annotated_genes":["SJAG_00754","SJAG_04752","SJAG_04907","SJAG_02708","SJAG_05237","SJAG_03675","SJAG_01260","SJAG_00623","SJAG_03328","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[59321,76531,73892,77372,77914,90336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[112784,71582,72607,77717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00754":null,"SJAG_01044":null,"SJAG_01260":null,"SJAG_02708":null,"SJAG_03328":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_04907":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:3.1.31.1"],"synonyms":[{"name":"3'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters","type":"related"}],"termid":"GO:0016894","terms_by_termid":{"GO:0000213":null,"GO:0008821":null,"GO:0048257":null}}


id: PBO:0086586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm","termid":"PBO:0086586"}


id: PBO:0026862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere","termid":"PBO:0026862"}


id: GO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellodextrin, a glucose polymer of 2 or more glucose monomers.","definition_xrefs":["GOC:tt","GOC:mengo_curators","PMID:18952792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"},{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellodextrin binding","termid":"GO:0044584"}


id: SO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small nucleolar RNAs (snoRNAs) are short non-coding RNAs enriched in the nucleolus as components of small nucleolar ribonucleoproteins. They guide ribose methylation and pseudouridylation of rRNAs and snRNAs, and a subgroup regulate excision of rRNAs from rRNA precursor transcripts. snoRNAs may also guide rRNA acetylation and tRNA methylation, and regulate mRNA abundance and alternative splicing.","definition_xrefs":["GOC:kgc","PMID:31828325"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"},{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:snoRNA","type":"exact"},{"name":"small nucleolar RNA","type":"exact"}],"termid":"SO:0000275"}


id: PR:Q09760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cullin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11932:SF23","OMA:SCHPO00186","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.03","secondary_identifiers":["UniProtKB:Q09760"],"synonyms":[{"name":"Cul-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CUL3","type":"exact"}],"termid":"PR:Q09760"}


id: GO:0061921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propionylation of peptidyl-lysine.","definition_xrefs":["PMID:17267393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine propionylation","termid":"GO:0061921"}


id: FYPO:0000820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a peptide pheromone released into the growth medium by cells is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of substance in growth medium","termid":"FYPO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of pheromone in growth medium","synonyms":[{"name":"decreased accumulation of pheromone in growth medium","type":"related"},{"name":"decreased concentration of peptide pheromone in growth medium","type":"exact"},{"name":"decreased level of pheromone in growth medium","type":"exact"},{"name":"decreased release of pheromone into growth medium","type":"related"},{"name":"pheromone production: decreased","type":"related"},{"name":"reduced concentration of pheromone in growth medium","type":"exact"}],"termid":"FYPO:0000820"}


id: GO:0006957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, alternative pathway","synonyms":[{"name":"complement cascade, alternative pathway","type":"exact"}],"termid":"GO:0006957"}


id: GO:0004946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with bombesin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"bombesin receptor activity","termid":"GO:0004946"}


id: PBO:0079365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 8","termid":"PBO:0079365"}


id: PBO:0068352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 130","termid":"PBO:0068352"}


id: GO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"negatively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of basidiospore formation","termid":"GO:0075304"}


id: FYPO:0005398
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of double-strand break repair via homologous recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12628934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-strand break repair","termid":"FYPO:0001033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000298"],"is_obsolete":false,"name":"normal frequency of double-strand break repair via homologous recombination","synonyms":[{"name":"normal frequency of double-strand break repair via homologous recombination during mitotic cell cycle","type":"related"},{"name":"normal frequency of double-strand break repair via homologous recombination during vegetative growth","type":"exact"},{"name":"normal occurrence of double-strand break repair via homologous recombination","type":"exact"}],"termid":"FYPO:0005398"}


id: PR:P78804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-specific glutamate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04676","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-specific glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.12c","secondary_identifiers":["UniProtKB:P78804"],"synonyms":[{"name":"NADP-GDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NADP-dependent glutamate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gdhA","type":"exact"}],"termid":"PR:P78804"}


id: PBO:0091735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNA-specific guide RNA","termid":"PBO:0091735"}


id: PBO:0044731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 17","termid":"PBO:0044731"}


id: PR:Q10160
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ-mediated genome instability protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.03c","synonyms":[{"name":"Spom972h-rmi1","type":"exact"}],"termid":"PR:Q10160"}


id: GO:0043414
data:
  {"annotated_genes":["SJAG_02352","SJAG_03008","SJAG_00722","SJAG_01314","SJAG_01958","SJAG_02024","SJAG_02350","SJAG_02417","SJAG_00943","SJAG_02377","SJAG_03901","SJAG_03289","SJAG_03713","SJAG_04848","SJAG_04735","SJAG_03367","SJAG_04367","SJAG_02042","SJAG_02302","SJAG_02281","SJAG_05249","SJAG_03877","SJAG_00325","SJAG_02386","SJAG_02099","SJAG_03016","SJAG_00886","SJAG_04453","SJAG_03332","SJAG_02817","SJAG_04181","SJAG_04993","SJAG_01269","SJAG_01261","SJAG_03773","SJAG_02821","SJAG_02637","SJAG_00255","SJAG_04680","SJAG_04736","SJAG_03410","SJAG_01375","SJAG_00499","SJAG_04034","SJAG_04649","SJAG_04890","SJAG_05334","SJAG_00744"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[77025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[59764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[104444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001510"},{"annotations":[74834,78588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[78256,74884,77144,77585,77593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070475"},{"annotations":[94390,77994,103719,59536,64434,74448,77545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031167"},{"annotations":[94323,103443,89743,105499,106607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"},{"annotations":[114033,110869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[102138,105459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[101170,86160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[72137,74696,75409,73572,73417,84340,90303,93622,107401,72470,75221,74835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030488"},{"annotations":[77028,94922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[99570,72961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[110019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[84039,89549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[93398,98334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The covalent attachment of a methyl residue to one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylation","termid":"GO:0032259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00722":null,"SJAG_00744":null,"SJAG_00886":null,"SJAG_00943":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_01958":null,"SJAG_02024":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02281":null,"SJAG_02302":null,"SJAG_02350":null,"SJAG_02352":null,"SJAG_02377":null,"SJAG_02386":null,"SJAG_02417":null,"SJAG_02637":null,"SJAG_02817":null,"SJAG_02821":null,"SJAG_03008":null,"SJAG_03016":null,"SJAG_03289":null,"SJAG_03332":null,"SJAG_03367":null,"SJAG_03410":null,"SJAG_03713":null,"SJAG_03773":null,"SJAG_03877":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macromolecule methylation","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0043414","terms_by_termid":{"GO:0000452":null,"GO:0001510":null,"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0031167":null,"GO:0036261":null,"GO:0070475":null,"GO:0070476":null,"GO:0070901":null,"GO:0106004":null,"GO:0106005":null,"GO:0106217":null}}


id: PBO:0056975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 28","termid":"PBO:0056975"}


id: GO:0005457
data:
  {"annotated_genes":["SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88961],"is_not":false,"summary":null,"term":"GO:0005457"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a GDP-fucose from one side of a membrane to the other. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide-sugar transmembrane transporter activity","termid":"GO:0036080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"GDP-fucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5653596","Reactome:R-HSA-742345"],"termid":"GO:0005457","terms_by_termid":{"GO:0005457":null}}


id: PBO:0072599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remodeling and spacing factor 1","termid":"PBO:0072599"}


id: PBO:0049000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC6 antisense RNA 2","termid":"PBO:0049000"}


id: PBO:0044377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 1","termid":"PBO:0044377"}


id: PBO:0068308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11 pseudogene 1","termid":"PBO:0068308"}


id: GO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of bacterium","type":"narrow"}],"termid":"GO:0070956"}


id: PBO:0079858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B7 (pseudogene)","termid":"PBO:0079858"}


id: MOD:00880
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 6x(13)C labeled 4-sulfophenyl isothiocyanate.","definition_xrefs":["PubMed:15536630","PubMed:16526082","Unimod:464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:00880"}


id: PBO:0086593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression downregulated by treatment with 8-methoxypsoralen plus UVA irradiation; not an essential gene; YGR273C has a paralog, YMR295C, that arose from the whole genome duplication","termid":"PBO:0086593"}


id: PR:O74365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sol1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit sol1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.04c","synonyms":[{"name":"SWI/SNF complex subunit sol1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sol1","type":"exact"},{"name":"switch one-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription regulatory protein sol1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74365"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: PBO:0055449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2881","termid":"PBO:0055449"}


id: PBO:0048131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 11","termid":"PBO:0048131"}


id: GO:0030935
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of three collagen chains assembled into a left-handed triple helix. These trimers assemble into a sheet.","definition_xrefs":["PMID:7188361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"part_of","term_name":"collagen sheet","termid":"GO:0098646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sheet-forming collagen trimer","synonyms":[{"name":"hexagonal network-forming collagen","type":"exact"}],"termid":"GO:0030935"}


id: PBO:0084404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine-specific metalloprotease of the pitrilysin family; metalloprotease of the intermembrane space; degrades proteins and presequence peptides cleaved from imported proteins; required for normal mitochondrial morphology; mutation in human homolog PITRM1 is implicated in autosomal recessive spinocerebellar ataxias (ARCA)","termid":"PBO:0084404"}


id: GO:0061314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling involved in heart development","synonyms":[{"name":"Notch signalling involved in heart development","type":"exact"}],"termid":"GO:0061314"}


id: PBO:0029592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0029592"}


id: PBO:0072454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 18","termid":"PBO:0072454"}


id: GO:0005885
data:
  {"annotated_genes":["SJAG_01268","SJAG_01384","SJAG_02245","SJAG_03086","SJAG_01964","SJAG_02075","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74310,75676,76778,77156,77683,78369,78498],"is_not":false,"summary":null,"term":"GO:0005885"}]},"cv_name":"cellular_component","definition":"A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.","definition_xrefs":["PMID:12479800","GOC:jl","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_04100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"Arp2/3 protein complex","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0005885","terms_by_termid":{"GO:0005885":null}}


id: GO:0042358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine diphosphate metabolic process","termid":"GO:0042357"},{"relation_name":"is_a","term_name":"thiamine-containing compound catabolic process","termid":"GO:0042725"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006766","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"thiamine diphosphate catabolic process","synonyms":[{"name":"TPP catabolism","type":"exact"},{"name":"TPP catabolic process","type":"exact"},{"name":"thiamin diphosphate breakdown","type":"exact"},{"name":"thiamin diphosphate catabolic process","type":"exact"},{"name":"thiamin diphosphate catabolism","type":"exact"},{"name":"thiamin diphosphate degradation","type":"exact"},{"name":"thiamin pyrophosphate catabolic process","type":"exact"},{"name":"thiamin pyrophosphate catabolism","type":"exact"},{"name":"thiamine diphosphate catabolism","type":"exact"},{"name":"thiamine pyrophosphate catabolic process","type":"exact"},{"name":"thiamine pyrophosphate catabolism","type":"exact"}],"termid":"GO:0042358"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: PBO:0003022
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to give coding product","termid":"PBO:0003022"}


id: PBO:0055342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2770","termid":"PBO:0055342"}


id: PBO:0048086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 7","termid":"PBO:0048086"}


id: GO:1901407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901407)","synonyms":[{"name":"regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901407"}


id: GO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell mediated immunity","synonyms":[{"name":"regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"regulation of B-cell mediated immunity","type":"exact"},{"name":"regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002712"}


id: PBO:0073412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 16","termid":"PBO:0073412"}


id: GO:0005795
data:
  {"annotated_genes":["SJAG_01633","SJAG_04770","SJAG_03278","SJAG_04095","SJAG_03634","SJAG_02902","SJAG_01516","SJAG_04548","SJAG_04112","SJAG_03347","SJAG_01276","SJAG_00567","SJAG_00816","SJAG_01025","SJAG_03555"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70645,91982,106121],"is_not":false,"summary":null,"term":"GO:0005795"},{"annotations":[74968,91630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[76619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031985"},{"annotations":[77466,75643,71408],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005797"},{"annotations":[71407,95009,75642,77465,91631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000138"},{"annotations":[70237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[113133,100340,93435,83292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_01633":null,"SJAG_02902":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04548":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794"],"is_obsolete":false,"name":"Golgi stack","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0016940"],"synonyms":[{"name":"Golgi cisternae","type":"exact"},{"name":"dictyosome","type":"narrow"}],"termid":"GO:0005795","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005795":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_at_point","termid":"PBO:0034110"}


id: PBO:0034119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pollinated_by","termid":"PBO:0034119"}


id: PBO:0050236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene14","termid":"PBO:0050236"}


id: PBO:0062189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 1 pseudogene","termid":"PBO:0062189"}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: PBO:0086887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane polyol transporter; supports growth on and uptake of mannitol and sorbitol with moderate affinity when overexpressed in a strain deleted for hexose family members; minor hexose transport activity when overexpressed in a similar strain; induced by non-fermentable carbon sources; induced in low glucose, repressed in high glucose; HXT13 has a paralog, HXT17, that arose from a segmental duplication","termid":"PBO:0086887"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: GO:2000255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of germ cell proliferation","termid":"GO:1905937"},{"relation_name":"is_a","term_name":"regulation of male germ cell proliferation","termid":"GO:2000254"},{"relation_name":"negatively_regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of male germ cell proliferation","termid":"GO:2000255"}


id: PBO:0058323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4696","termid":"PBO:0058323"}


id: PBO:0003768
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.3","termid":"PBO:0003768"}


id: SO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_trimethylation_site","synonyms":[{"name":"H3K27 tri-methylation site","type":"exact"},{"name":"H3K27Me3","type":"related"}],"termid":"SO:0001709"}


id: PBO:0085302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin; recruits, activates, and targets Pho85p cyclin-dependent protein kinase to its substrate; PCL10 has a paralog, PCL8, that arose from the whole genome duplication","termid":"PBO:0085302"}


id: PBO:0083409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W","termid":"PBO:0083409"}


id: GO:0097012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to granulocyte macrophage colony-stimulating factor","synonyms":[{"name":"response to GM-CSF","type":"exact"},{"name":"response to granulocyte macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:0097012"}


id: PBO:0083585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcript is predicted to be spliced but there is no evidence that it is spliced in vivo","termid":"PBO:0083585"}


id: PBO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin S","termid":"PBO:0061160"}


id: GO:0046051
data:
  {"annotated_genes":["SJAG_02887","SJAG_00412","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71336,71834,95568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UTP, uridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate metabolic process","termid":"GO:0009208"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00964":null,"SJAG_02887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"UTP metabolism","type":"exact"}],"termid":"GO:0046051","terms_by_termid":{"GO:0006228":null}}


id: PR:Q09173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.07c","synonyms":[{"name":"PP2C-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ptc3","type":"exact"}],"termid":"PR:Q09173"}


id: GO:0035814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal sodium excretion","termid":"GO:0035813"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}


id: GO:1900647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"negative regulation of ergot alkaloid biosynthetic process","termid":"GO:1900823"},{"relation_name":"negatively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"down regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"down regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"down regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"down regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"down regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"down-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"down-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"down-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"down-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"downregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"downregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"downregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"downregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"downregulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"inhibition of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"inhibition of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"inhibition of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"inhibition of chanoclavine-I aldehyde formation","type":"exact"},{"name":"inhibition of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"negative regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"negative regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"negative regulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900647"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: PBO:0046667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial splicing regulatory protein 2","termid":"PBO:0046667"}


id: PBO:0039743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L5","termid":"PBO:0039743"}


id: GO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of myeloid dendritic cell activation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell activation","termid":"GO:0030885"}


id: PBO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"securin, sister chromatid separation inhibitor","termid":"PBO:0003950"}


id: PR:O13993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10102:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.12","secondary_identifiers":["UniProtKB:O13993"],"synonyms":[{"name":"SPAC26H5.12","type":"related"},{"name":"Spom972h-POLRMT","type":"exact"}],"termid":"PR:O13993"}


id: GO:0043122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the canonical NF-kappaB signaling cascade.","definition_xrefs":["PMID:12773372","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"canonical NF-kappaB signal transduction","termid":"GO:0007249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of canonical NF-kappaB signal transduction","synonyms":[{"name":"regulation of I-kappaB kinase/NF-kappaB cascade","type":"exact"},{"name":"regulation of I-kappaB kinase/NF-kappaB signaling","type":"exact"}],"termid":"GO:0043122"}


id: PBO:0075331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SON pseudogene 1","termid":"PBO:0075331"}


id: GO:0018996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The periodic shedding of part or all of a collagen and cuticulin-based cuticle, which is then replaced by a new collagen and cuticulin-based cuticle. An example of this is found in the Nematode worm, Caenorhabditis elegans.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle","termid":"GO:0042303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molting cycle, collagen and cuticulin-based cuticle","synonyms":[{"name":"collagen and cuticulin-based cuticle molting cycle","type":"exact"}],"termid":"GO:0018996"}


id: GO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to papulacandin B","termid":"GO:0072730"}


id: PBO:0004976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic enzyme (predicted)","termid":"PBO:0004976"}


id: PR:Q9URV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C106.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.12c","synonyms":[{"name":"Spom972h-tho4","type":"exact"}],"termid":"PR:Q9URV0"}


id: GO:0061860
data:
  {"annotated_genes":["SJAG_00729","SJAG_01010","SJAG_02182","SJAG_00272","SJAG_04150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85311,89590,90861,107525,108068],"is_not":false,"summary":null,"term":"GO:0061860"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their removal from the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:23499004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA clamp unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA clamp unloading activity","type":"exact"}],"termid":"GO:0061860","terms_by_termid":{"GO:0061860":null}}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: PATO:0001701
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's exhibiting complete growth, differentiation, or development.","definition_xrefs":["Merriam-Webster:Merriam-Webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature","termid":"PATO:0001701"}


id: GO:1900756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Protein processing that takes place in the phagosome. Most protein processing in the phagosome represents protein degradation.","definition_xrefs":["GOC:rjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"protein processing in phagocytic vesicle","synonyms":[{"name":"peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"peptidolysis during protein maturation in phagosome","type":"related"},{"name":"protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"protein maturation by proteolysis in phagosome","type":"related"},{"name":"protein processing in phagosome","type":"exact"}],"termid":"GO:1900756"}


id: PBO:0028088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028088"}


id: PR:O14227
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdp1 gene.","definition_xrefs":["UniProtKB:O14227","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent RNA polymerase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.09","synonyms":[{"name":"Spom972h-rdp1","type":"exact"},{"name":"protein rdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14227"}


id: GO:0060668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of salivary gland branching as a result of the transfer of information from the extracellular matrix to the epithelium of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"is_a","term_name":"regulation of branching involved in salivary gland morphogenesis","termid":"GO:0060693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling","synonyms":[{"name":"regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signalling","type":"exact"}],"termid":"GO:0060668"}


id: PBO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_silent_mating-type_cassette_during_vegetative_growth","termid":"PBO:0036014"}


id: GO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and bound via a GPI-anchor to the plasma membrane of B cells.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgD immunoglobulin complex, GPI-anchored","synonyms":[{"name":"GPI-anchored IgD","type":"exact"}],"termid":"GO:0071741"}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: GO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA in a mitochondrion, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylalanyl-tRNA aminoacylation","termid":"GO:0006432"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0006520","GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA aminoacylation","termid":"GO:0070156"}


id: PBO:0068591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 42, pseudogene","termid":"PBO:0068591"}


id: GO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring tensile strength","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030020"}


id: PBO:0057459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 578","termid":"PBO:0057459"}


id: PBO:0086758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proposed to be involved in iron or copper homeostasis; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086758"}


id: PBO:0056825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14C, pseudogene","termid":"PBO:0056825"}


id: PBO:0082948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic malate dehydrogenase; one of three isozymes that catalyze interconversion of malate and oxaloacetate; involved in the glyoxylate cycle and gluconeogenesis during growth on two-carbon compounds; interacts with Pck1p and Fbp1; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0082948"}


id: GO:0052808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + 1,5-dihydrocoenzyme F420 = NADPH + H+ + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:11726492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:NADP+ oxidoreductase activity","secondary_identifiers":["EC:1.5.1.40"],"synonyms":[{"name":"F420H2:NADP oxidoreductase activity","type":"exact"},{"name":"F420H2:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP+:F420 oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent NADP oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent NADP reductase activity","type":"exact"}],"termid":"GO:0052808"}


id: PBO:0078995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 2-2","termid":"PBO:0078995"}


id: PBO:0088140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0088140"}


id: PR:Q9UT00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An extended synaptotagmin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PYUK71.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUK71.03c","secondary_identifiers":["UniProtKB:Q9UT00"],"synonyms":[{"name":"Spom972h-ESYT1","type":"exact"}],"termid":"PR:Q9UT00"}


id: PBO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4","termid":"PBO:0050599"}


id: PBO:0073062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 4","termid":"PBO:0073062"}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: PBO:0030467
data:
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id: PBO:0091261
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id: GO:0035129
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id: GO:0038187
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id: PBO:0068016
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id: GO:0002185
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id: PBO:0057463
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id: GO:0051143
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id: PBO:0052645
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id: GO:0032265
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id: GO:0043885
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id: GO:0060888
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id: GO:0018314
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id: GO:0170039
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id: PBO:0056401
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id: PBO:0014285
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id: PBO:0049573
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id: PBO:0056882
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id: GO:0042819
data:
  {"annotated_genes":["SJAG_01383","SJAG_01543","SJAG_00283","SJAG_00691","SJAG_00707","SJAG_01881","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[76934,74640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[109600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[74730,83516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[74728,83518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyridoxine-5'-phosphate biosynthesis","type":"related"},{"name":"vitamin B6 anabolism","type":"exact"},{"name":"vitamin B6 biosynthesis","type":"exact"},{"name":"vitamin B6 formation","type":"exact"},{"name":"vitamin B6 synthesis","type":"exact"}],"termid":"GO:0042819","terms_by_termid":{"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: FYPO:0002428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and vegetative cells of normal size and shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and cells with normal morphology (obsolete FYPO:0002428)","termid":"FYPO:0002428"}


id: PBO:0082510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the COP9 signalosome (CSN) complex; acts as an isopeptidase in cleaving the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; metalloendopeptidase involved in the adaptation to pheromone signaling; involved in modulation of genes controlling amino acid and lipid metabolism, and ergosterol biosynthesis","termid":"PBO:0082510"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: GO:0047105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + 4-trimethylammoniobutanal = NADH + 4-trimethylammoniobutanoate.","definition_xrefs":["MetaCyc:1.2.1.47-RXN","EC:1.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-trimethylammoniobutyraldehyde dehydrogenase activity","secondary_identifiers":["RHEA:17985","Reactome:R-HSA-71260"],"synonyms":[{"name":"4-N-trimethylaminobutyraldehyde dehydrogenase activity","type":"related"},{"name":"4-trimethylaminobutyraldehyde dehydrogenase activity","type":"related"},{"name":"4-trimethylammoniobutanal:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047105"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: PBO:0109081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3105","termid":"PBO:0109081"}


id: PBO:0087584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase","termid":"PBO:0087584"}


id: PBO:0089185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphate synthase Tps2","termid":"PBO:0089185"}


id: GO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","secondary_identifiers":["EC:1.7.1.-","UM-BBD_enzymeID:e0346"],"termid":"GO:0046857"}


id: PBO:0088874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylpeptide hydrolase","termid":"PBO:0088874"}


id: GO:0046838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of removing a phosphate group from a phosphorylated carbohydrate, any organic compound based on the general formula Cx(H2O)y with a phosphate group attached to it.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylated carbohydrate dephosphorylation (obsolete GO:0046838)","termid":"GO:0046838"}


id: PBO:0004673
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia","termid":"PBO:0004673"}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: PBO:0077550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 258","termid":"PBO:0077550"}


id: GO:0050519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apo-citrate lyase + 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA = diphosphate + holo-citrate lyase.","definition_xrefs":["MetaCyc:2.7.7.61-RXN","EC:2.7.7.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"holo-citrate lyase synthase activity","secondary_identifiers":["RHEA:16333"],"synonyms":[{"name":"2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase activity","type":"related"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase activity","type":"related"},{"name":"2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase adenylyltransferase activity","type":"related"},{"name":"CitX","type":"related"},{"name":"holo-ACP synthase activity","type":"related"}],"termid":"GO:0050519"}


id: GO:0010954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of protein maturation by peptide bond cleavage.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of proteolysis","termid":"GO:0045862"},{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"positively_regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein processing","synonyms":[{"name":"positive regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0010954"}


id: GO:0006972
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12142009","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HOG response","type":"exact"},{"name":"hypertonic response","type":"exact"},{"name":"response to hypertonicity","type":"exact"}],"termid":"GO:0006972","terms_by_termid":{"GO:0071474":null}}


id: GO:0033026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte apoptotic process","termid":"GO:2000107"},{"relation_name":"negatively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell apoptotic process","synonyms":[{"name":"down regulation of mast cell apoptosis","type":"exact"},{"name":"down-regulation of mast cell apoptosis","type":"exact"},{"name":"downregulation of mast cell apoptosis","type":"exact"},{"name":"inhibition of mast cell apoptosis","type":"narrow"},{"name":"negative regulation of mast cell apoptosis","type":"narrow"}],"termid":"GO:0033026"}


id: GO:0051539
data:
  {"annotated_genes":["SJAG_03588","SJAG_04639","SJAG_01058","SJAG_05280","SJAG_03724","SJAG_00153","SJAG_04265","SJAG_02497","SJAG_03553","SJAG_01574","SJAG_01935","SJAG_00995","SJAG_02994","SJAG_04756","SJAG_00260","SJAG_02261","SJAG_04736","SJAG_03243","SJAG_01630","SJAG_03222","SJAG_02818","SJAG_04085","SJAG_02627","SJAG_02908","SJAG_00455","SJAG_05027","SJAG_02895","SJAG_04016","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70414,72929,73446,78610,83562,84572,87812,90463,91051,91725,92247,93623,94465,94828,95530,96311,99592,100639,100719,100964,102713,104438,104571,105022,106847,107922,109048,109316,109961],"is_not":false,"summary":null,"term":"GO:0051539"}]},"cv_name":"molecular_function","definition":"Binding to a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["Wikipedia:Iron-sulfur_cluster","GOC:ai","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00995":null,"SJAG_01058":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01935":null,"SJAG_02261":null,"SJAG_02497":null,"SJAG_02627":null,"SJAG_02818":null,"SJAG_02895":null,"SJAG_02908":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03243":null,"SJAG_03553":null,"SJAG_03588":null,"SJAG_03724":null,"SJAG_04016":null,"SJAG_04085":null,"SJAG_04183":null,"SJAG_04265":null,"SJAG_04639":null,"SJAG_04736":null,"SJAG_04756":null,"SJAG_05027":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"4 iron, 4 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"4 Fe 4 S cluster binding","type":"exact"},{"name":"4 iron, 4 sulphur cluster binding","type":"exact"},{"name":"4Fe-4S cluster binding","type":"exact"},{"name":"iron-sulfur cluster 4Fe-4S binding","type":"exact"},{"name":"iron-sulphur cluster 4Fe-4S binding","type":"exact"},{"name":"tetrairon tetrasulfide cluster binding","type":"exact"},{"name":"tetrairon tetrasulphide cluster binding","type":"exact"}],"termid":"GO:0051539","terms_by_termid":{"GO:0051539":null}}


id: FYPO:0007284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the non-growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to non-growing cell tip","synonyms":[{"name":"normal protein localisation to non-growing cell tip","type":"exact"},{"name":"normal protein localization to non-growing cell end","type":"exact"},{"name":"normal protein localization to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to non-growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0007284"}


id: PBO:0017835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic chromosome segregation protein Csi2","termid":"PBO:0017835"}


id: GO:1904409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secretory granule organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15039777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secretory granule organization","synonyms":[{"name":"regulation of secretory granule organisation","type":"exact"},{"name":"regulation of secretory granule organization and biogenesis","type":"related"}],"termid":"GO:1904409"}


id: PBO:0087824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit, involved in RNA pol II transcription initiation; possesses in vitro histone acetyltransferase activity but its role in vivo appears to be minor; involved in promoter binding and G1/S progression; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087824"}


id: PBO:0059910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 33","termid":"PBO:0059910"}


id: GO:0070107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070107"}


id: GO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion of two solutes between the inside and outside of a cell or subcellular compartment, in which movement of one solute down a concentration gradient drives movement of the other solute in the opposite direction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:solute exchange (obsolete GO:0030180)","synonyms":[{"name":"solute:solute exchange","type":"exact"}],"termid":"GO:0030180"}


id: PATO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001087 relative efficiency value (obsolete PATO:0001087)","termid":"PATO:0001087"}


id: PBO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 3","termid":"PBO:0060934"}


id: GO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is decreased.","definition_xrefs":["GOC:mtg_cardio","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure","synonyms":[{"name":"down regulation of blood pressure","type":"exact"},{"name":"down-regulation of blood pressure","type":"exact"},{"name":"downregulation of blood pressure","type":"exact"},{"name":"inhibition of blood pressure","type":"narrow"}],"termid":"GO:0045776"}


id: GO:0044495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism modulates the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","PMID:19837656","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of biological quality in another organism","termid":"GO:0044553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of blood pressure in another organism","synonyms":[{"name":"modulation of blood pressure in other organism","type":"exact"},{"name":"regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044495"}


id: PBO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-endonuclease Apn2","termid":"PBO:0003563"}


id: PBO:0041667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein","termid":"PBO:0041667"}


id: PBO:0040623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 2","termid":"PBO:0040623"}


id: PBO:0072232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 7","termid":"PBO:0072232"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["GOC:mah","PMID:9520414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LK binding","type":"exact"},{"name":"LMW kininogen binding","type":"exact"}],"termid":"GO:0030986"}


id: GO:0047802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + S-(4-bromophenyl)-L-cysteine = (4-bromophenylsulfanyl)pyruvate + L-glutamate.","definition_xrefs":["EC:2.6.1.75","RHEA:13485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cysteine-conjugate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04338","MetaCyc:CYSTEINE-CONJUGATE-TRANSAMINASE-RXN"],"synonyms":[{"name":"S-(4-bromophenyl)-L-cysteine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"cysteine conjugate aminotransferase activity","type":"related"},{"name":"cysteine-conjugate alpha-ketoglutarate transaminase (CAT-1)","type":"related"}],"termid":"GO:0047802"}


id: MOD:01355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01355"}


id: GO:1905268
data:
  {"annotated_genes":["SJAG_03255","SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[103826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[76343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061186"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.","definition_xrefs":["PMID:654321","GOC:TermGenie","GOC:pr","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"negatively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03255":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0045798","GO:1903309"],"synonyms":[{"name":"down regulation of chromatin assembly or disassembly","type":"related"},{"name":"down regulation of chromatin organisation","type":"exact"},{"name":"down regulation of chromatin organization","type":"exact"},{"name":"down regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"down-regulation of chromatin assembly or disassembly","type":"related"},{"name":"down-regulation of chromatin organisation","type":"exact"},{"name":"down-regulation of chromatin organization","type":"exact"},{"name":"down-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"downregulation of chromatin assembly or disassembly","type":"related"},{"name":"downregulation of chromatin organisation","type":"exact"},{"name":"downregulation of chromatin organization","type":"exact"},{"name":"downregulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"inhibition of chromatin assembly or disassembly","type":"narrow"},{"name":"inhibition of chromatin organisation","type":"narrow"},{"name":"inhibition of chromatin organization","type":"narrow"},{"name":"inhibition of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"negative regulation of chromatin assembly or disassembly","type":"related"},{"name":"negative regulation of chromatin assembly/disassembly","type":"exact"},{"name":"negative regulation of chromatin modification","type":"related"},{"name":"negative regulation of chromatin organisation","type":"exact"},{"name":"negative regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905268","terms_by_termid":{"GO:0060906":null,"GO:0061186":null,"GO:0061188":null}}


id: GO:0043727
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109716],"is_not":false,"summary":null,"term":"GO:0043727"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminoimidazole + CO2 = 5-amino-4-imidazole carboxylate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"5-amino-4-imidazole carboxylate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.1.21"],"termid":"GO:0043727","terms_by_termid":{"GO:0043727":null}}


id: PBO:0066440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RETREG1 antisense RNA 1","termid":"PBO:0066440"}


id: PBO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 4","termid":"PBO:0048477"}


id: PBO:0044219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 2","termid":"PBO:0044219"}


id: PBO:0065230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR11 antisense RNA 1","termid":"PBO:0065230"}


id: PBO:0082481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carboxy-terminal domain (CTD) phosphatase; essential for dephosphorylation of the repeated C-terminal domain of the RNA polymerase II large subunit (Rpo21p); relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082481"}


id: PBO:0034640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_chromosome_condensation_during_telophase","termid":"PBO:0034640"}


id: PBO:0041424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 44","termid":"PBO:0041424"}


id: PBO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase (predicted)","termid":"PBO:0002296"}


id: GO:0033308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyectoine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hydroxyectoine transport","termid":"GO:0033308"}


id: PBO:0038939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADH5 pseudogene 3","termid":"PBO:0038939"}


id: PBO:0027979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0027979"}


id: GO:0060844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cell to an arterial endothelial cell fate and its capacity to differentiate into an arterial endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"},{"relation_name":"part_of","term_name":"arterial endothelial cell differentiation","termid":"GO:0060842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell fate commitment","termid":"GO:0060844"}


id: GO:1905423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:tb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"positively_regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plant organ morphogenesis","synonyms":[{"name":"activation of plant organ morphogenesis","type":"narrow"},{"name":"up regulation of plant organ morphogenesis","type":"exact"},{"name":"up-regulation of plant organ morphogenesis","type":"exact"},{"name":"upregulation of plant organ morphogenesis","type":"exact"}],"termid":"GO:1905423"}


id: PBO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyl-ADP-ribose deacylase 1","termid":"PBO:0061757"}


id: GO:1902074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","GOC:TermGenie","PMID:16666921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt","synonyms":[{"name":"response to salinity","type":"narrow"}],"termid":"GO:1902074"}


id: GO:0009709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terpenoid indole alkaloids, compounds formed from the condensation of tryptamine (derived from tryptophan) and secologanin (derived from geranyl pyrophosphate).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"terpenoid indole alkaloid biosynthetic process","synonyms":[{"name":"terpenoid indole alkaloid anabolism","type":"exact"},{"name":"terpenoid indole alkaloid biosynthesis","type":"exact"},{"name":"terpenoid indole alkaloid formation","type":"exact"},{"name":"terpenoid indole alkaloid synthesis","type":"exact"}],"termid":"GO:0009709"}


id: PBO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response (predicted)","termid":"PBO:0018136"}


id: PBO:0031834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisomal_morphology","termid":"PBO:0031834"}


id: GO:2000854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"positively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of corticosterone secretion","termid":"GO:2000854"}


id: PBO:0086217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases; involved in tRNA delivery, stimulating catalysis, and ensuring localization; also binds quadruplex nucleic acids; protein abundance increases in response to DNA replication stress; methionyl-tRNA synthetase is Mes1p; glutamyl-tRNA synthetase is Gus1p","termid":"PBO:0086217"}


id: PATO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process to oxygen","synonyms":[{"name":"sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001458"}


id: GO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylthiopentyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 5-methylthiopentyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4330"],"termid":"GO:0080068"}


id: PBO:0108982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 6","termid":"PBO:0108982"}


id: MOD:01105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-bromobenzyloxycarbonyl","synonyms":[{"name":"BrZ","type":"exact"}],"termid":"MOD:01105"}


id: PBO:0029372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_medial_cortex_during_vegetative_growth","termid":"PBO:0029372"}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: GO:0140734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of ammonium ions from an excretory cell.","definition_xrefs":["PMID:25740900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ammonium excretion","synonyms":[{"name":"ammonia excretion","type":"related"}],"termid":"GO:0140734"}


id: GO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the presence of oxygen.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aerobic phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pba"],"synonyms":[{"name":"aerobic phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0018959"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: GO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP-independent ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER following transport from the cytosol via a TAP-independent pathway. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","termid":"GO:0002484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002486"}


id: PBO:0051300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-37 (non-functional)","termid":"PBO:0051300"}


id: GO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the single stranded telomeric 3' overhang, a conserved feature that ranges in length from 12 nt in budding yeast to approximately 500 nt in humans.","definition_xrefs":["PMID:16096639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"telomere capping","termid":"GO:0016233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"telomeric 3' overhang formation","synonyms":[{"name":"telomere 3'-end processing","type":"exact"},{"name":"telomere end processing","type":"related"}],"termid":"GO:0031860"}


id: GO:0047397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl beta-D-glucosyl phosphate + H2O = dolichol-phosphate + beta-D-glucose.","definition_xrefs":["EC:3.1.4.48","MetaCyc:3.1.4.48-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichylphosphate-glucose phosphodiesterase activity","secondary_identifiers":["RHEA:13857"],"synonyms":[{"name":"Dol-P-Glc phosphodiesterase activity","type":"related"},{"name":"dolichol phosphoglucose phosphodiesterase activity","type":"related"},{"name":"dolichyl-beta-D-glucosyl-phosphate dolichylphosphohydrolase activity","type":"related"},{"name":"dolichyl-phosphate-glucose phosphodiesterase activity","type":"exact"}],"termid":"GO:0047397"}


id: GO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylputrescine + H2O = acetate + putrescine.","definition_xrefs":["RHEA:23412","EC:3.5.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0019213","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylputrescine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLPUTRESCINE-DEACETYLASE-RXN","KEGG_REACTION:R01156"],"synonyms":[{"name":"N-acetylputrescine acetylhydrolase activity","type":"related"}],"termid":"GO:0047609"}


id: PATO:0001481
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an oblique or slanted direction.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sloped","termid":"PATO:0001481"}


id: GO:0010147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructan catabolic process","secondary_identifiers":["MetaCyc:PWY-862"],"synonyms":[{"name":"fructan breakdown","type":"exact"},{"name":"fructan catabolism","type":"exact"},{"name":"fructan degradation","type":"exact"},{"name":"levan catabolic process","type":"exact"},{"name":"levan catabolism","type":"exact"}],"termid":"GO:0010147"}


id: GO:0043332
data:
  {"annotated_genes":["SJAG_01732","SJAG_00870","SJAG_01888","SJAG_00667","SJAG_03596","SJAG_00677","SJAG_02351","SJAG_04001","SJAG_03145","SJAG_01794","SJAG_03444","SJAG_02700","SJAG_03646","SJAG_00185","SJAG_01171","SJAG_04982","SJAG_01017","SJAG_03453","SJAG_04723","SJAG_02169","SJAG_04509","SJAG_02924","SJAG_03357","SJAG_02228","SJAG_00514","SJAG_04100","SJAG_01215","SJAG_01993","SJAG_03011","SJAG_02486","SJAG_01943","SJAG_04781","SJAG_04887","SJAG_02718","SJAG_00938","SJAG_04901","SJAG_00700","SJAG_04703","SJAG_05001","SJAG_05285","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70484,72267,73702,76663,83675,86372,86414,88208,89101,92428,93268,93465,94424,98677,101487,102228,102521,104174,104381,109531,110971,113695],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[103474,114663,90947,88138,109820,95634,89639,111339,86527,103416,84053,84839,97409,89444,95047,106571,97410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[105493,91937],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The apex of the mating projection in unicellular fungi exposed to mating pheromone; site of polarized growth.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00514":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection tip","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube tip","type":"narrow"},{"name":"shmoo tip","type":"narrow"}],"termid":"GO:0043332","terms_by_termid":{"GO:0043332":null,"GO:0070867":null,"GO:1990819":null}}


id: GO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic root are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic root morphogenesis","termid":"GO:0010086"}


id: GO:0140468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via HRI (also known as EIF2AK1), an intracellular protein kinase that is activated by stress signals, such as heme deficiency, oxidative stress, osmotic shock, mitochondrial dysfunction and heat shock.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"HRI-mediated signaling","synonyms":[{"name":"EIF2AK1-mediated signaling","type":"exact"}],"termid":"GO:0140468"}


id: PBO:0024865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Mcp2","termid":"PBO:0024865"}


id: GO:1900155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"negatively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone trabecula formation","synonyms":[{"name":"down regulation of bone trabecula biogenesis","type":"related"},{"name":"down regulation of bone trabecula formation","type":"exact"},{"name":"down regulation of bone trabeculation","type":"exact"},{"name":"down regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down regulation of skeletal trabecula formation","type":"exact"},{"name":"down regulation of skeletal trabeculation","type":"exact"},{"name":"down-regulation of bone trabecula biogenesis","type":"related"},{"name":"down-regulation of bone trabecula formation","type":"exact"},{"name":"down-regulation of bone trabeculation","type":"exact"},{"name":"down-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"down-regulation of skeletal trabecula formation","type":"exact"},{"name":"down-regulation of skeletal trabeculation","type":"exact"},{"name":"downregulation of bone trabecula biogenesis","type":"related"},{"name":"downregulation of bone trabecula formation","type":"exact"},{"name":"downregulation of bone trabeculation","type":"exact"},{"name":"downregulation of skeletal trabecula biogenesis","type":"related"},{"name":"downregulation of skeletal trabecula formation","type":"exact"},{"name":"downregulation of skeletal trabeculation","type":"exact"},{"name":"inhibition of bone trabecula biogenesis","type":"related"},{"name":"inhibition of bone trabecula formation","type":"narrow"},{"name":"inhibition of bone trabeculation","type":"narrow"},{"name":"inhibition of skeletal trabecula biogenesis","type":"related"},{"name":"inhibition of skeletal trabecula formation","type":"narrow"},{"name":"inhibition of skeletal trabeculation","type":"narrow"},{"name":"negative regulation of bone trabecula biogenesis","type":"related"},{"name":"negative regulation of bone trabeculation","type":"exact"},{"name":"negative regulation of skeletal trabecula biogenesis","type":"related"},{"name":"negative regulation of skeletal trabecula formation","type":"exact"},{"name":"negative regulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900155"}


id: PBO:0067501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 638, pseudogene","termid":"PBO:0067501"}


id: PBO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with","termid":"PBO:0034358"}


id: PBO:0081777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 705E, pseudogene","termid":"PBO:0081777"}


id: PBO:0038485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 10","termid":"PBO:0038485"}


id: PBO:0029647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus_during_cellular_response_to_copper_ion","termid":"PBO:0029647"}


id: PR:Q9Y719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.05","synonyms":[{"name":"Spom972h-mok13","type":"exact"}],"termid":"PR:Q9Y719"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: MOD:01039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00036. Remap to MOD:00036.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01039 hydroxy aspartyl (obsolete MOD:01039)","termid":"MOD:01039"}


id: PBO:0078434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-4","termid":"PBO:0078434"}


id: GO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mevalonate from one side of a membrane to the other. Mevalonate is the anion of mevalonic acid; its (R)-enantiomer is a strategic intermediate derived from hydroxymethylglutaryl-CoA in the biosynthesis of polyprenyl compounds.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mevalonate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015130"}


id: GO:1902076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lateral motor column neuron migration.","definition_xrefs":["PMID:20711475","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of motor neuron migration","termid":"GO:1905483"},{"relation_name":"regulates","term_name":"lateral motor column neuron migration","termid":"GO:0097477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lateral motor column neuron migration","termid":"GO:1902076"}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: GO:0030549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"},{"relation_name":"is_a","term_name":"acetylcholine receptor regulator activity","termid":"GO:0030548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activator activity","termid":"GO:0030549"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: GO:0097397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-32","termid":"GO:0097395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-32","synonyms":[{"name":"cellular response to IL-32","type":"exact"}],"termid":"GO:0097397"}


id: GO:0009815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-aminocyclopropane-1-carboxylate + L-ascorbate + O2 = CO2 + dehydroascorbate + ethylene + 2 H2O + hydrogen cyanide. Ethene is also known as ethylene.","definition_xrefs":["RHEA:23640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate oxidase activity","secondary_identifiers":["EC:1.14.17.4","KEGG_REACTION:R07214","MetaCyc:ETHYL-RXN"],"synonyms":[{"name":"1-aminocyclopropane-1-carboxylate oxygenase (ethylene-forming)","type":"related"},{"name":"ACC oxidase activity","type":"exact"},{"name":"aminocyclopropanecarboxylate oxidase activity","type":"related"},{"name":"ethene-forming enzyme","type":"broad"},{"name":"ethylene-forming enzyme","type":"broad"}],"termid":"GO:0009815"}


id: FYPO:0000206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at ribosomal DNA repeats is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin silencing at rDNA","synonyms":[{"name":"abnormal chromatin silencing at rDNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at rDNA during vegetative growth","type":"exact"},{"name":"abnormal chromatin silencing at ribosomal DNA","type":"exact"}],"termid":"FYPO:0000206"}


id: GO:1903383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of H2O2-induced neuron apoptosis","type":"broad"},{"name":"regulation of H2O2-induced neuron intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of hydrogen peroxide-induced neuron apoptosis","type":"broad"},{"name":"regulation of hydrogen peroxide-induced neuronal apoptosis","type":"broad"},{"name":"regulation of neuron apoptosis in response to hydrogen peroxide","type":"related"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"regulation of neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"}],"termid":"GO:1903383"}


id: GO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, out of a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"auxin efflux transmembrane transporter activity","synonyms":[{"name":"auxin efflux carrier","type":"related"},{"name":"auxin efflux facilitator","type":"related"}],"termid":"GO:0010329"}


id: PBO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-6 (pseudogene)","termid":"PBO:0051121"}


id: GO:0043416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"}


id: PBO:0045935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1 pseudogene 2","termid":"PBO:0045935"}


id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: FYPO:0007047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}


id: GO:2000830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"positively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of parathyroid hormone secretion","synonyms":[{"name":"positive regulation of PTH secretion","type":"exact"},{"name":"positive regulation of parathormone secretion","type":"exact"},{"name":"positive regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000830"}


id: PBO:0063711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGM5 antisense RNA 1","termid":"PBO:0063711"}


id: FYPO:0001457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tunicamycin. Cells stop growing (and may die) at a concentration of tunicamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tunicamycin","synonyms":[{"name":"hypersensitive to tunicamycin","type":"exact"},{"name":"sensitive to tunicamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to tunicamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0001457"}


id: PBO:0036105
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0036105"}


id: GO:0046292
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77073,91118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving formaldehyde (methanal, H2C=O), a colorless liquid or gas with a pungent odor, commonly used as a fixative or an antibacterial agent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"formaldehyde metabolism","type":"exact"},{"name":"methanal metabolic process","type":"exact"},{"name":"methanal metabolism","type":"exact"}],"termid":"GO:0046292","terms_by_termid":{"GO:0046294":null}}


id: GO:0120308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal outer doublet, a part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["GOC:ach","PMID:16278296","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085","GO:0000226"],"is_obsolete":false,"name":"axonemal outer doublet assembly","synonyms":[{"name":"axonemal outer doublet biogenesis","type":"exact"},{"name":"axonemal outer doublet formation","type":"exact"},{"name":"axonemal outer doublet morphogenesis","type":"exact"},{"name":"axoneme outer doublet assembly","type":"exact"},{"name":"outer doublet assembly","type":"broad"},{"name":"outer-doublet microtubule assembly","type":"broad"}],"termid":"GO:0120308"}


id: GO:0097137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAD-BCL-xl complex","termid":"GO:0097137"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: PBO:0082484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cargo-transport protein involved in endocytosis; interacts with phosphatidylinositol-4-kinase Stt4p; is required, along with Efr3p, for the assembly and recruitment of multiple copies of the kinase into phosphoinositide kinase (PIK) patches at the plasma membrane; positively regulates Stt4p; GFP-fusion protein localizes to the cytoplasm; YGR198W is an essential gene","termid":"PBO:0082484"}


id: PBO:0058578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6515","termid":"PBO:0058578"}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: PBO:0080725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor 1 associated protein pseudogene 1","termid":"PBO:0080725"}


id: FYPO:0007942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin  loop  formation  during meiotic prophase I results in  chromatin loops of increased length.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin loop formation during meiotic prophase I","termid":"FYPO:0007944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased length of chromatin loops during meiotic prophase I","termid":"FYPO:0007942"}


id: MOD:01782
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-methyl-L-serine.","definition_xrefs":["PubMed:20668449","RESID:AA0533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methyl-L-serine","synonyms":[{"name":"(2S)-3-hydroxy-2-(methylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N-methylserine","type":"exact"},{"name":"N-methyl-L-serine","type":"exact"},{"name":"N-methylserine","type":"exact"}],"termid":"MOD:01782"}


id: PBO:0062930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P3H2 antisense RNA 1","termid":"PBO:0062930"}


id: PBO:0083882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase and cupric reductase; reduces siderophore-bound iron and oxidized copper prior to uptake by transporters; expression induced by low copper and iron levels","termid":"PBO:0083882"}


id: PBO:0041598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 9","termid":"PBO:0041598"}


id: GO:1990595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with basic secretagogues to initiate pseudo-allergic reactions in mast cells.","definition_xrefs":["PMID:25517090","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"mast cell secretagogue receptor activity","termid":"GO:1990595"}


id: GO:0033258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving plastid DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"plastid DNA metabolic process","synonyms":[{"name":"plastid DNA metabolism","type":"exact"}],"termid":"GO:0033258"}


id: PBO:0041120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 3","termid":"PBO:0041120"}


id: PBO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-67-1 (pseudogene)","termid":"PBO:0051245"}


id: GO:0102513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside 5-O-glucosyltransferase (vanilloyl-glucose dependent) activity","secondary_identifiers":["MetaCyc:RXN-14442"],"termid":"GO:0102513"}


id: GO:0071087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha11-beta1 integrin complex bound to a type I collagen.","definition_xrefs":["PMID:10464311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha11-beta1 integrin-collagen type I complex","synonyms":[{"name":"ITGA11-ITGB1-COL1A1 complex","type":"narrow"}],"termid":"GO:0071087"}


id: GO:1904918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-histidine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000078","PMID:22822152","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-histidine transmembrane transport","termid":"GO:0089709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"transmembrane L-histidine transport from lysosomal lumen to cytosol","termid":"GO:1904918"}


id: GO:0008818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosylcobinamide-GDP + alpha-ribazole-5'-phosphate = adenosylcobalamin-5'-phosphate + GMP.","definition_xrefs":["MetaCyc:COBALAMIN5PSYN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"cobalamin 5'-phosphate synthase activity","secondary_identifiers":["RHEA:23560"],"termid":"GO:0008818"}


id: GO:0097116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering process in which gephyrin molecules are localized to distinct domains in the postsynaptic density as part of postsynaptic density assembly. Gephyrin is a component of the postsynaptic protein network of inhibitory synapses.","definition_xrefs":["GOC:BHF","GOC:sjp","PMID:15620359","PMID:24552784","PMID:25772192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to synapse","termid":"GO:0035418"},{"relation_name":"part_of","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179"],"is_obsolete":false,"name":"gephyrin clustering involved in postsynaptic density assembly","synonyms":[{"name":"Geph clustering","type":"broad"}],"termid":"GO:0097116"}


id: PATO:0001901
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction that is similar to the direction of an object to the north when it faces south.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"back","termid":"PATO:0001901"}


id: PBO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 18","termid":"PBO:0070345"}


id: PBO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity (predicted)","termid":"PBO:0000267"}


id: GO:0047953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NADP+ = glycerone + H+ + NADPH.","definition_xrefs":["RHEA:12753","EC:1.1.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerol 2-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01039","MetaCyc:GLYCEROL-2-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"DHA oxidoreductase activity","type":"related"},{"name":"dihydroxyacetone (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"dihydroxyacetone reductase (NADPH)","type":"related"},{"name":"dihydroxyacetone reductase activity","type":"related"},{"name":"glycerol:NADP+ 2-oxidoreductase (glycerone-forming)","type":"related"}],"termid":"GO:0047953"}


id: SO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif that affects the stability of RNA.","definition_xrefs":["PMID:22495308","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_stability_element","synonyms":[{"name":"RNA stability element","type":"exact"}],"termid":"SO:0001979"}


id: PBO:0035736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitosis","termid":"PBO:0035736"}


id: GO:0023050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The steps whereby the downstream processes started by a signal are brought to a conclusion. Examples include destruction of cAMP by PDE, or endocytosis resulting from receptor phosphorylation. The termination process ends when the receptor has returned to its inactive state.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete consequence of signal transmission (obsolete GO:0023050)","synonyms":[{"name":"consequence of signal transmission","type":"exact"},{"name":"signal termination","type":"exact"}],"termid":"GO:0023050"}


id: PBO:0049193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 4","termid":"PBO:0049193"}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: PBO:0054560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1962","termid":"PBO:0054560"}


id: GO:0061634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-D-xylose residues with release of alpha-D-xylose.","definition_xrefs":["EC:3.2.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"alpha-D-xyloside xylohydrolase","synonyms":[{"name":"alpha-xylosidase","type":"related"}],"termid":"GO:0061634"}


id: PBO:0059743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 17","termid":"PBO:0059743"}


id: PBO:0087222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold subunit of the Hrd1p ubiquitin ligase; also promotes ligase oligomerization; involved in ER-associated protein degradation (ERAD); interacts with the U1 snRNP-specific protein, Snp1p","termid":"PBO:0087222"}


id: GO:0017163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity that prevents or downregulates basal transcription. Basal transcription results from transcription that is controlled by the minimal complement of proteins necessary to reconstitute transcription from a minimal promoter.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete basal transcription repressor activity (obsolete GO:0017163)","synonyms":[{"name":"basal transcription repressor activity","type":"exact"}],"termid":"GO:0017163"}


id: GO:0098687
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