# terms

id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: GO:0021663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 4. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:curators","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 formation","termid":"GO:0021663"}


id: PBO:0091690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp2","termid":"PBO:0091690"}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: FYPO:0006589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is decreased, and some of the protein is instead detected distributed over a greater area of the plasma membrane than normal.","definition_xrefs":["PMID:29134248","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to shmoo tip membrane","termid":"FYPO:0006587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to shmoo tip membrane, with protein distributed in plasma membrane","synonyms":[{"name":"decreased protein localisation to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"decreased protein localization to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"decreased protein localization to plasma membrane at shmoo tip, with protein distributed in plasma membrane","type":"exact"},{"name":"decreased protein localization to shmoo membrane fusion domain, with protein distributed in plasma membrane","type":"exact"},{"name":"decreased protein localization to shmoo projection membrane, with protein distributed in plasma membrane","type":"related"},{"name":"reduced protein localization to shmoo tip membrane, with protein distributed in plasma membrane","type":"related"}],"termid":"FYPO:0006589"}


id: GO:0019294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","termid":"GO:0046400"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid biosynthetic process","secondary_identifiers":["MetaCyc:KDOSYN-PWY"],"synonyms":[{"name":"KDO biosynthesis","type":"exact"},{"name":"KDO biosynthetic process","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid anabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid biosynthesis","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid formation","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid synthesis","type":"exact"},{"name":"ketodeoxyoctanoate biosynthetic process","type":"related"}],"termid":"GO:0019294"}


id: PATO:0001295
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality restricted to a particular wavelength.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"albedo","termid":"PATO:0001295"}


id: FYPO:0000652
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[114610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a molecular function such as binding or catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotype","termid":"FYPO:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"name":"molecular function phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796","SJAG_01458"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","acb1delta"],"synonyms":[{"name":"fission yeast molecular function phenotype","type":"exact"}],"termid":"FYPO:0000652","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: PBO:0076521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 31","termid":"PBO:0076521"}


id: PBO:0034592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATPase_activator_activity","termid":"PBO:0034592"}


id: PBO:0082499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of class II HDA1 histone deacetylase complex; role in azole resistance via Hsp90p, and in heat shock response; Hda1p interacts with Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation; the HDA1 histone deacetylase complex regulates aging through trehalose metabolism","termid":"PBO:0082499"}


id: PBO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRE Element Binding","termid":"PBO:0002104"}


id: GO:0120253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["GOC:krc","Wikipedia:Hydrocarbon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon catabolic process","synonyms":[{"name":"hydrocarbon breakdown","type":"exact"},{"name":"hydrocarbon catabolism","type":"exact"},{"name":"hydrocarbon degradation","type":"exact"}],"termid":"GO:0120253"}


id: PBO:0002714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A, intrinsic regulator (predicted)","termid":"PBO:0002714"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: GO:0060132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a prolactin secreting cell over time, from its formation to the mature structure. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"prolactin secreting cell differentiation","termid":"GO:0060127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell development","synonyms":[{"name":"epsilon-acidophil development","type":"exact"},{"name":"lactotrope development","type":"exact"},{"name":"lactotroph development","type":"exact"},{"name":"lactotropic cell development","type":"exact"},{"name":"mammotrope development","type":"exact"},{"name":"mammotroph development","type":"exact"},{"name":"mammotrophic cell development","type":"exact"},{"name":"mammotropic cell development","type":"exact"}],"termid":"GO:0060132"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: PBO:0067843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 145","termid":"PBO:0067843"}


id: PBO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX10 antisense RNA 1","termid":"PBO:0075240"}


id: PBO:0088629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Irs4","termid":"PBO:0088629"}


id: GO:0070366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte differentiation","synonyms":[{"name":"regulation of liver cell differentiation","type":"exact"}],"termid":"GO:0070366"}


id: FYPO:0002328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to terbinafine. Cells stop growing (and may die) at a concentration of terbinafine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to terbinafine","synonyms":[{"name":"hypersensitive to terbinafine","type":"exact"},{"name":"sensitive to terbinafine during mitotic cell cycle","type":"related"},{"name":"sensitive to terbinafine during vegetative growth","type":"exact"}],"termid":"FYPO:0002328"}


id: PATO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000114 temperature sensitivity (obsolete PATO:0000114)","termid":"PATO:0000114"}


id: PR:Q92347
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.02c","secondary_identifiers":["UniProtKB:Q92347"],"synonyms":[{"name":"Spom972h-NOP9","type":"exact"},{"name":"pumilio domain-containing protein nop9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92347"}


id: GO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"protein dimerization activity","termid":"GO:0046983"}


id: PBO:0091680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, late meiosis specific","termid":"PBO:0091680"}


id: PBO:0084578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YBR075W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBR074W","termid":"PBO:0084578"}


id: GO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the ability of the host to mount a defense in response to its presence. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host process","termid":"GO:0044003"},{"relation_name":"is_a","term_name":"response to host defenses","termid":"GO:0052200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host defense response","secondary_identifiers":["GO:0052255"],"synonyms":[{"name":"mitigation by symbiont of host defense response","type":"exact"},{"name":"modulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host defense response","type":"exact"},{"name":"pathogenesis","type":"related"},{"name":"perturbation by symbiont of host defense response","type":"exact"}],"termid":"GO:0052031"}


id: GO:0016078
data:
  {"annotated_genes":["SJAG_01176","SJAG_01521","SJAG_03745","SJAG_01818","SJAG_03179","SJAG_00854","SJAG_04006","SJAG_04321","SJAG_04084","SJAG_16455","SJAG_04818","SJAG_04153","SJAG_02275","SJAG_04824","SJAG_01191","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84151,95115],"is_not":false,"summary":null,"term":"GO:0016078"},{"annotations":[110611,70874,92808,101845,74495,71496,72350,76512,70356,71787,97541,102814,111048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071038"},{"annotations":[90551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"},{"relation_name":"is_a","term_name":"ncRNA catabolic process","termid":"GO:0034661"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0044248"],"is_obsolete":false,"name":"tRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"tRNA breakdown","type":"exact"},{"name":"tRNA catabolism","type":"exact"},{"name":"tRNA degradation","type":"exact"}],"termid":"GO:0016078","terms_by_termid":{"GO:0016078":null,"GO:0071038":null,"GO:0106354":null}}


id: PBO:0036543
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism","termid":"PBO:0036543"}


id: GO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule organizing center part (obsolete GO:0044450)","synonyms":[{"name":"MTOC component","type":"exact"},{"name":"microtubule organizing centre component","type":"exact"}],"termid":"GO:0044450"}


id: GO:0004369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + O2 = glycerone phosphate + H2O2.","definition_xrefs":["RHEA:18369","EC:1.1.3.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate oxidase activity","secondary_identifiers":["MetaCyc:GLYCEROL-3-PHOSPHATE-OXIDASE-RXN","KEGG_REACTION:R00846"],"synonyms":[{"name":"L-alpha-glycerol-3-phosphate oxidase activity","type":"related"},{"name":"L-alpha-glycerophosphate oxidase activity","type":"related"},{"name":"alpha-glycerophosphate oxidase activity","type":"related"},{"name":"glycerol phosphate oxidase activity","type":"related"},{"name":"glycerol-1-phosphate oxidase activity","type":"related"},{"name":"sn-glycerol-3-phosphate:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0004369"}


id: GO:0033012
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A permanent cup-shaped structure at the cell plasma membrane in secretory cells. Following a secretory stimulus, secretory vesicles transiently dock and fuse at the base of porosomes and release intravesicular contents dictated by the turgor pressure generated from the swelling of secretory vesicles.","definition_xrefs":["PMID:16563225","PMID:15090256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"porosome","secondary_identifiers":["Wikipedia:Porosome"],"termid":"GO:0033012"}


id: PBO:0046607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 9","termid":"PBO:0046607"}


id: PBO:0014304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transporter Gcs1 (predicted)","termid":"PBO:0014304"}


id: GO:2000101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"}


id: PBO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 34","termid":"PBO:0052794"}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: PBO:0065373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 1","termid":"PBO:0065373"}


id: PBO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.1","termid":"PBO:0005603"}


id: FYPO:0005128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:17927811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of middle meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of middle meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005128"}


id: PBO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPCML intronic transcript 2","termid":"PBO:0061889"}


id: GO:1990926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which synaptic transmission, induced by the arrival of a spike (action potential) at a synapse, acts to increase the amount of neurotransmitter released in response to the arrival of subsequent spikes. This effect is seen when a train of closely space spikes arrives at a synapse with a low initial release probability. It occurs in a timeframe of tens to hundreds of milliseconds.","definition_xrefs":["GOC:dos","GOC:sp","ISBN:9780071120005","PMID:26738595","PMID:11826273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"short-term synaptic potentiation","synonyms":[{"name":"synaptic facilitation","type":"exact"}],"termid":"GO:1990926"}


id: MOD:00941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12175151","Unimod:488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydropyrrolizidine alkaloid (dehydroretronecine) derivatized cysteine","synonyms":[{"name":"DHP","type":"related"},{"name":"Dehydropyrrolizidine alkaloid (dehydroretronecine) on cysteines","type":"related"}],"termid":"MOD:00941"}


id: PBO:0087263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein phosphatase Z, isoform of Ppz2p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance","termid":"PBO:0087263"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: PBO:0046777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 2 pseudogene 1","termid":"PBO:0046777"}


id: PBO:0035845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035845"}


id: PBO:0090736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk1","termid":"PBO:0090736"}


id: GO:0140941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-methionine = H+ + N(6),N(6)-dimethyl-L-lysyl(20)-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the monomethlyated lysine residue at position 20 of histone H4, producing H4K20me2.","definition_xrefs":["RHEA:60348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0008276","GO:0003824","GO:0140096","GO:0016741"],"is_obsolete":false,"name":"histone H4K20me methyltransferase activity","secondary_identifiers":["EC:2.1.1.362"],"synonyms":[{"name":"histone H4 methyl lysine(20) N-methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone H4-K20 dimethylation","type":"broad"},{"name":"histone H4K20 dimethylation","type":"broad"},{"name":"histone H4K20me methylase activity","type":"exact"}],"termid":"GO:0140941"}


id: PBO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YPR127W date=19700101","termid":"PBO:0011988"}


id: PBO:0053419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 359","termid":"PBO:0053419"}


id: PBO:0085777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein needed for ER membrane biosynthesis in response to ER stress; member of the highly conserved FIT family of proteins involved in triglyceride droplet biosynthesis; homologous to human FIT2/FITM2, a fatty acyl-CoA diphosphatase; interacts with Sst2p and Hsp82p in high-throughput two-hybrid screens","termid":"PBO:0085777"}


id: PBO:0073637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 24, pseudogene","termid":"PBO:0073637"}


id: PBO:0005871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21S rRNA","termid":"PBO:0005871"}


id: MOD:00949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01933. Remap to MOD:01933.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00949 desmosine (obsolete MOD:00949)","termid":"MOD:00949"}


id: GO:0070564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"positively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"activation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"positive regulation of VDR signaling pathway","type":"exact"},{"name":"positive regulation of vitamin D receptor signalling pathway","type":"exact"},{"name":"stimulation of vitamin D receptor signaling pathway","type":"narrow"},{"name":"up regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"up-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"upregulation of vitamin D receptor signaling pathway","type":"exact"}],"termid":"GO:0070564"}


id: GO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:ai","Wikipedia:GABAB_receptor","IUPHAR_RECEPTOR:1276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"GABA receptor activity","termid":"GO:0016917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled GABA receptor activity","secondary_identifiers":["Reactome:R-HSA-1013012","Reactome:R-HSA-1013013"],"synonyms":[{"name":"G-protein coupled GABA receptor activity","type":"exact"},{"name":"GABA-B receptor activity","type":"related"},{"name":"metabotropic GABA receptor","type":"related"}],"termid":"GO:0004965"}


id: GO:0006224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete uridine kinase reaction (obsolete GO:0006224)","synonyms":[{"name":"uridine kinase reaction","type":"exact"}],"termid":"GO:0006224"}


id: GO:0018178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-threonine to form peptidyl-O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["RESID:AA0267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein adenylylation","termid":"GO:0018117"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine adenylylation","synonyms":[{"name":"peptidyl-threonine adenylation","type":"exact"}],"termid":"GO:0018178"}


id: MOD:01713
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl with one of the Applied Biosystems iTRAQ4plex reagent reporter+balance acyloxy groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter+balance reagent O-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01713"}


id: GO:0072755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to benomyl (obsolete GO:0072755)","termid":"GO:0072755"}


id: PBO:0088075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; involved in cell cycle progression through S phase; UBP7 has a paralog, UBP11, that arose from the whole genome duplication","termid":"PBO:0088075"}


id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferrileghemoglobin = NADP+ + 2 ferroleghemoglobin.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leghemoglobin reductase activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"}],"termid":"GO:0015043"}


id: PBO:0090675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Hsf1","termid":"PBO:0090675"}


id: PBO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H2","termid":"PBO:0050566"}


id: GO:0015087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cobalt (Co) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"cobalt ion transmembrane transporter activity","secondary_identifiers":["RHEA:28578"],"synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"related"},{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015087"}


id: GO:0030341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the eliminative degradation of polysaccharides containing 1,4-beta-D-hexosaminyl and 1,3-beta-D-glucuronosyl linkages to disaccharides containing 4-deoxy-beta-D-gluc-4-enuronosyl groups.","definition_xrefs":["EC:4.2.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"chondroitin AC lyase activity","secondary_identifiers":["MetaCyc:4.2.2.5-RXN"],"synonyms":[{"name":"ChnAC","type":"related"},{"name":"chondroitin AC eliminase activity","type":"related"},{"name":"chondroitin lyase activity","type":"exact"},{"name":"chondroitin sulfate lyase activity","type":"related"},{"name":"chondroitinase AC","type":"related"},{"name":"chondroitinase activity","type":"broad"}],"termid":"GO:0030341"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: GO:0102435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myricetin(1-) + S-adenosyl-L-methionine = 7-O-methylmyricetin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"myricetin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13910"],"termid":"GO:0102435"}


id: PBO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 3","termid":"PBO:0039556"}


id: GO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoate + NAD+ = H+ + NADH + succinate semialdehyde.","definition_xrefs":["RHEA:23948","EC:1.1.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN","KEGG_REACTION:R01644"],"synonyms":[{"name":"4-hydroxybutanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"gamma-hydroxybutyrate dehydrogenase activity","type":"related"}],"termid":"GO:0047577"}


id: PR:Q10497
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26F1.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.11","synonyms":[{"name":"Spom972h-SPAC26F1.11","type":"exact"}],"termid":"PR:Q10497"}


id: PBO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD40 molecule","termid":"PBO:0042320"}


id: GO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a pericardial nephrocyte. A pericardial nephrocyte is an insect renal cell that filters hemolymph and is found with other pericardial nephrocytes in two rows flanking the dorsal vessel. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["CL:0000474","PMID:19783135","GOC:dph","GOC:sart","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardial nephrocyte differentiation","secondary_identifiers":["GO:0007513"],"synonyms":[{"name":"pericardial cell differentiation","type":"narrow"}],"termid":"GO:0061320"}


id: PBO:0083163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene SSB1","termid":"PBO:0083163"}


id: PBO:0043405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 2","termid":"PBO:0043405"}


id: GO:0051412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.","definition_xrefs":["PMID:15240347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosterone","synonyms":[{"name":"response to corticosterone stimulus","type":"exact"}],"termid":"GO:0051412"}


id: PBO:0070709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 14","termid":"PBO:0070709"}


id: GO:0035991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of nitric oxide (NO).","definition_xrefs":["PMID:21491957","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"nitric oxide sensor activity","synonyms":[{"name":"NO sensor activity","type":"exact"}],"termid":"GO:0035991"}


id: GO:0033928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-mannosidic linkages in (1->4)-beta-D-mannans, to remove successive mannobiose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"mannan 1,4-mannobiosidase activity","secondary_identifiers":["MetaCyc:3.2.1.100-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannobiohydrolase activity","type":"broad"},{"name":"exo-1,4-beta-mannobiohydrolase activity","type":"related"},{"name":"exo-beta-mannanase activity","type":"related"},{"name":"mannan 1,4-beta-mannobiosidase activity","type":"related"}],"termid":"GO:0033928"}


id: PBO:0043780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A6","termid":"PBO:0043780"}


id: PBO:0089917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-spanning vacuolar membrane protease","termid":"PBO:0089917"}


id: PBO:0053506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 489","termid":"PBO:0053506"}


id: GO:0007426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The projection of branches of an open tracheal system towards their target tissues. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal outgrowth, open tracheal system","termid":"GO:0007426"}


id: PBO:0071908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 47","termid":"PBO:0071908"}


id: PBO:0075588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 1","termid":"PBO:0075588"}


id: PBO:0089920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2","termid":"PBO:0089920"}


id: GO:0050597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-yl acetate = 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + H2O + NADP+.","definition_xrefs":["RHEA:15241","EC:1.14.14.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taxane 10-beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R06309","MetaCyc:1.14.13.76-RXN"],"synonyms":[{"name":"5-alpha-taxadienol-10-beta-hydroxylase activity","type":"related"},{"name":"taxa-4(20),11-dien-5alpha-yl acetate,NADPH:oxygen oxidoreductase (10beta-hydroxylating)","type":"related"},{"name":"taxane 10b-hydroxylase activity","type":"exact"},{"name":"taxane 10beta-hydroxylase activity","type":"related"}],"termid":"GO:0050597"}


id: PBO:0083475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SKP1","termid":"PBO:0083475"}


id: PBO:0059106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 2","termid":"PBO:0059106"}


id: PBO:0078377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 1","termid":"PBO:0078377"}


id: PBO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 13","termid":"PBO:0060112"}


id: GO:1902775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial large ribosomal subunit.","definition_xrefs":["PMID:24206665","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal large subunit assembly","termid":"GO:0000027"},{"relation_name":"part_of","term_name":"mitochondrial ribosome assembly","termid":"GO:0061668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"mitochondrial large ribosomal subunit assembly","synonyms":[{"name":"39S ribosomal subunit, mitochondrial assembly","type":"narrow"},{"name":"39S ribosomal subunit, mitochondrial formation","type":"narrow"},{"name":"mitochondrial large ribosomal subunit formation","type":"exact"}],"termid":"GO:1902775"}


id: GO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroimidazoles, imidazole derivatives with a nitro group attached to one ring.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroimidazole metabolic process","synonyms":[{"name":"nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052802"}


id: PBO:0089174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L21/aconitate hydratase, fusion protein","termid":"PBO:0089174"}


id: GO:0032228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"}


id: FYPO:0000174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal cell wall","termid":"FYPO:0002946"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell wall biogenesis","synonyms":[{"name":"abnormal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0000174"}


id: FYPO:0005511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any meiotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"meiotic cell cycle checkpoint phenotype","synonyms":[{"name":"fission yeast meiotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0005511"}


id: FYPO:0004370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of cadmium ions into the vacuole occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0036249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased cadmium ion import into vacuole","synonyms":[{"name":"decreased cadmium import into vacuole","type":"exact"},{"name":"decreased cadmium ion import into vacuole during mitotic cell cycle","type":"related"},{"name":"decreased cadmium ion import into vacuole during vegetative growth","type":"exact"},{"name":"reduced cadmium ion import into vacuole","type":"exact"}],"termid":"FYPO:0004370"}


id: GO:0034238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a macrophage to one or more other cells to form a multinucleated cell.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage fusion","termid":"GO:0034238"}


id: PBO:0078730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-2","termid":"PBO:0078730"}


id: GO:0120180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a cell-substrate junction into its constituent components.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"},{"relation_name":"is_a","term_name":"cell junction disassembly","termid":"GO:0150146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction disassembly","termid":"GO:0120180"}


id: MOD:00319
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-aspartic acid residue by a thioether bond to form 2-(S-L-cysteinyl)-L-aspartic acid.","definition_xrefs":["PubMed:11717396","PubMed:11555656","RESID:AA0314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(S-L-cysteinyl)-L-aspartic acid","synonyms":[{"name":"(2R,3S)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)butanedioic acid","type":"exact"},{"name":"(2R,3S,6R)-2,6-diamino-3-carboxy-4-thiaheptanedioic acid","type":"exact"},{"name":"3-(L-cystein-S-yl)-L-aspartic acid","type":"exact"},{"name":"3-carboxy-L-lanthionine","type":"exact"},{"name":"CROSSLNK 3-cysteinyl-aspartic acid (Cys-Asp)","type":"exact"}],"termid":"MOD:00319"}


id: PBO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein protein Pof1","termid":"PBO:0000932"}


id: GO:1905751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["PMID:22869721","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"positive regulation of endocytic recycling","termid":"GO:2001137"},{"relation_name":"positively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"activation of endosome to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"upregulation of endosome to plasma membrane protein transport","type":"exact"}],"termid":"GO:1905751"}


id: PBO:0055495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2929","termid":"PBO:0055495"}


id: PBO:0079867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk zinc finger","termid":"PBO:0079867"}


id: MOD:01666
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with epicocconone.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epicocconone derivatized residue","synonyms":[{"name":"(6S,9aS)-6-(hydroxymethyl)-3-[(1Z,4E,6E,8E)-1-hydroxy-3-oxodeca-1,4,6,8-tetraen-1-yl]-9a-methyl-5,6-dihydro-2H-furo[3,2-g]isochromene-2,9(9aH)-dione","type":"exact"},{"name":"Deep Purple","type":"exact"},{"name":"LavaPurple","type":"exact"},{"name":"Lightning Fast","type":"exact"}],"termid":"MOD:01666"}


id: GO:0099583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any neurotransmitter receptor activity that is involved in regulating the concentration of calcium in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099583"}


id: GO:0070266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death process which begins when a cell receives a signal (e.g. a ligand binding to a death receptor or to a Toll-like receptor), and proceeds through a series of biochemical events (signaling pathways), characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3) and by critical dependence on mixed lineage kinase domain-like (MLKL), and which typically lead to common morphological features of necrotic cell death. The process ends when the cell has died. The process is divided into a signaling phase, and an execution phase, which is triggered by the former.","definition_xrefs":["GOC:mtg_apoptosis","PMID:21876153","PMID:21737330","GOC:tb","GOC:mah","PMID:18846107","GOC:BHF","GOC:dph","PMID:20823910","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"necroptotic process","secondary_identifiers":["GO:0060555","GO:0060553","GO:0060554"],"synonyms":[{"name":"PARP-dependent cell death","type":"related"},{"name":"RIPK1-mediated regulated necrosis","type":"exact"},{"name":"TNF-induced necroptosis","type":"narrow"},{"name":"activation of necroptosis","type":"related"},{"name":"activation of necroptosis by extracellular signals","type":"related"},{"name":"activation of necroptosis in response to extracellular signals","type":"related"},{"name":"activation of necroptosis of activated-T cells","type":"related"},{"name":"establishment of necroptosis","type":"related"},{"name":"establishment of necroptosis of activated-T cells","type":"related"},{"name":"extracellular signal-induced necroptosis","type":"related"},{"name":"induction of necroptosis","type":"broad"},{"name":"induction of necroptosis by extracellular signals","type":"broad"},{"name":"induction of necroptosis of activated-T cells","type":"broad"},{"name":"necroptosis","type":"narrow"},{"name":"parthanatos","type":"related"},{"name":"programmed necrosis","type":"broad"},{"name":"programmed necrotic cell death","type":"broad"}],"termid":"GO:0070266"}


id: PR:Q09856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U4/U6 small nuclear ribonucleoprotein Prp3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR14212:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U5/U6 small nuclear ribonucleoprotein prp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.02","secondary_identifiers":["UniProtKB:Q09856"],"synonyms":[{"name":"SPAC29E6.02","type":"related"},{"name":"Spom972h-PRPF3","type":"exact"},{"name":"pre-mRNA-splicing factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09856"}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: GO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that contributes to a process of sexual reproduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mating pheromone secretion","synonyms":[{"name":"mating-type pheromone secretion","type":"exact"}],"termid":"GO:0071834"}


id: SO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short oligonucleotide sequence, of length on the order of 10's of bases; either single or double stranded.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Oligonucleotide"],"synonyms":[{"name":"oligonucleotide","type":"exact"}],"termid":"SO:0000696"}


id: PATO:0000456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000456 abstract (obsolete PATO:0000456)","termid":"PATO:0000456"}


id: PBO:0089289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine synthetase family","termid":"PBO:0089289"}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:15890777","PMID:25565961","PMID:15286082","GOC:krc","PMID:32616437","PMID:28320827","PMID:17047368","PMID:22122073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: GO:0106121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a cobalamin metabolic process.","definition_xrefs":["PMID:29056341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vitamin metabolic process","termid":"GO:0046136"},{"relation_name":"is_a","term_name":"regulation of cobalamin metabolic process","termid":"GO:0106064"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"positively_regulates","term_name":"cobalamin metabolic process","termid":"GO:0009235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0033013","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cobalamin metabolic process","termid":"GO:0106121"}


id: GO:0106223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:(+)-(R)-germacrene A + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = germacra-1(10),4,11(13)-trien-12-oate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:30303","PMID:11299372","PMID:20351109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"germacrene A hydroxylase activity","secondary_identifiers":["GO:0102260","MetaCyc:RXN-19749","EC:1.14.14.95"],"synonyms":[{"name":"germacrene A alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0106223"}


id: GO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle, embryonic","termid":"GO:0045977"},{"relation_name":"positively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"activation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"positive regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046002"}


id: PBO:0039366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 2","termid":"PBO:0039366"}


id: GO:1904490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of mitochondrial unfolded protein response.","definition_xrefs":["GO_REF:0000063","PMID:25961505","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904490)","synonyms":[{"name":"negative regulation of mitochondrial unfolded protein response by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"negative regulation of mtUPR by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"negative regulation of mtUPR by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904490"}


id: PBO:0068552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 3, pseudogene","termid":"PBO:0068552"}


id: SO:0001930
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a chloroplast DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_DNA","termid":"SO:0001033"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA_read","synonyms":[{"name":"chloroplast DNA read","type":"exact"}],"termid":"SO:0001930"}


id: PBO:0056648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 9","termid":"PBO:0056648"}


id: PBO:0017804
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 Associated protein","termid":"PBO:0017804"}


id: PBO:0041381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5a receptor 2","termid":"PBO:0041381"}


id: GO:0044420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular matrix component (obsolete GO:0044420)","synonyms":[{"name":"extracellular matrix part","type":"exact"}],"termid":"GO:0044420"}


id: PR:Q9Y7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.02","synonyms":[{"name":"Spom972h-mcp5","type":"exact"},{"name":"meiotically up-regulated gene 21 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear migration protein num1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J9"}


id: GO:0070503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a prosthetic group that contains selenium, as in the selenium-dependent molybdenum hydroxylases. The selenium atom in the prosthetic group is required for enzymatic function but is labile to a variety of treatments.","definition_xrefs":["GOC:dh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenium-containing prosthetic group metabolic process","synonyms":[{"name":"selenium-containing prosthetic group metabolism","type":"exact"}],"termid":"GO:0070503"}


id: PBO:0065784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine and serine rich 1","termid":"PBO:0065784"}


id: SO:0001411
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by its disposition to be involved in a biological process.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"region","termid":"SO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological_region","synonyms":[{"name":"INSDC_misc_feature","type":"broad"},{"name":"INSDC_note:biological_region","type":"exact"},{"name":"biological region","type":"exact"}],"termid":"SO:0001411"}


id: PATO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red brown","termid":"PATO:0001287"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark red brown","termid":"PATO:0001288"}


id: GO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"}


id: PBO:0042823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 2","termid":"PBO:0042823"}


id: GO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyloctanoyl-CoA = 4-methyloct-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-methyloctanoyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.99.-"],"termid":"GO:0034580"}


id: PBO:0088750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-60S shuttling factor Alb1","termid":"PBO:0088750"}


id: GO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt protein secretion","termid":"GO:0061356"}


id: PBO:0088875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol dehydrogenase His2","termid":"PBO:0088875"}


id: GO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"positively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"activation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"positive regulation of RAR signaling pathway","type":"exact"},{"name":"positive regulation of retinoic acid receptor signalling pathway","type":"exact"},{"name":"stimulation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"up regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"up-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"upregulation of retinoic acid receptor signaling pathway","type":"exact"}],"termid":"GO:0048386"}


id: PBO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated WD repeat protein Atg18a","termid":"PBO:0036312"}


id: PBO:0074872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 55","termid":"PBO:0074872"}


id: PBO:0043029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP3 and RNF103 antisense RNA 1","termid":"PBO:0043029"}


id: PBO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-N (predicted)","termid":"PBO:0003264"}


id: PBO:0031275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_flocculation","termid":"PBO:0031275"}


id: SO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A TCS element is a (yeast) transcription factor binding site, bound by the TEA DNA binding domain (DBD) of transcription factors. The consensus site is CATTCC or CATTCT.","definition_xrefs":["PMID:20118212","PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCS_element","synonyms":[{"name":"TCS element","type":"exact"},{"name":"TEA Consensus Sequence ","type":"exact"}],"termid":"SO:0002044"}


id: GO:0106396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["PMID:22878552","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell fate commitment","termid":"GO:0106396"}


id: PR:O59738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.02 gene.","definition_xrefs":["UniProtKB:O59738","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C530.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.02","synonyms":[{"name":"Spom972h-SPBC530.02","type":"exact"}],"termid":"PR:O59738"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: FYPO:0001159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular pH","synonyms":[{"name":"increased cellular pH during mitotic cell cycle","type":"related"},{"name":"increased cellular pH during vegetative growth","type":"exact"},{"name":"increased cellular pH level","type":"exact"}],"termid":"FYPO:0001159"}


id: GO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 36) = CoA + histone H3 N6-acetyl-L-lysine (position 36).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0034212","GO:0016746","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3K36 acetyltransferase activity","synonyms":[{"name":"histone H3-K36 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K36 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K36 specific)","type":"exact"}],"termid":"GO:0044018"}


id: PBO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal signal anchor","termid":"PBO:0000505"}


id: PBO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 3","termid":"PBO:0070537"}


id: GO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of sevenless signaling pathway","synonyms":[{"name":"regulation of sev signaling pathway","type":"exact"},{"name":"regulation of sevenless signalling pathway","type":"exact"}],"termid":"GO:0045501"}


id: PBO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-18","termid":"PBO:0051419"}


id: GO:0008681
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98667],"is_not":false,"summary":null,"term":"GO:0008681"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-octaprenyl-6-methoxyphenol + O2 + 4 H+ = 2-octaprenyl-6-methoxy-1,4-benzoquinol + H2O.","definition_xrefs":["RHEA:29407","PMID:4572721","PMID:27822549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-octaprenyl-6-methoxyphenol hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN"],"termid":"GO:0008681","terms_by_termid":{"GO:0008681":null}}


id: PBO:0068017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 322","termid":"PBO:0068017"}


id: PBO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I, II, and III subunit Rpb10","termid":"PBO:0002771"}


id: PBO:0013008
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae RAD54","termid":"PBO:0013008"}


id: PBO:0065908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab9 effector protein with kelch motifs pseudogene 1","termid":"PBO:0065908"}


id: FYPO:0002881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation and oxidative stress simultaneously. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during glucose starvation","termid":"FYPO:0002878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during glucose starvation and oxidative stress","synonyms":[{"name":"increased transcription during glucose depletion and oxidative stress","type":"exact"},{"name":"increased transcription during glucose deprivation and oxidative stress","type":"exact"},{"name":"increased transcription during glucose limitation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation and oxidative stress","type":"exact"},{"name":"increased transcription in response to glucose starvation during oxidative stress","type":"exact"}],"termid":"FYPO:0002881"}


id: PR:O74635
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF1","OMA:SCHPO01964","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit RPB9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.04c","secondary_identifiers":["UniProtKB:O74635"],"synonyms":[{"name":"DNA-directed RNA polymerase II 13.2 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase II subunit 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2I","type":"exact"}],"termid":"PR:O74635"}


id: PBO:0050235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 13","termid":"PBO:0050235"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: PBO:0049298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 2","termid":"PBO:0049298"}


id: PBO:0083610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame, unlikely to encode a protein; overlaps almost completely with YDL119C; mutations that would affect both YDL118W and YDL119C confer defective telomere maintenance and are synthetically sick or lethal with alpha-synuclein","termid":"PBO:0083610"}


id: PBO:0011055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input","termid":"PBO:0011055"}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: SO:0000847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a tmRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"tmRNA","termid":"SO:0000584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_region","synonyms":[{"name":"tmRNA region","type":"exact"}],"termid":"SO:0000847"}


id: GO:0102076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + O2 = 10'-apo-beta-carotenal + beta-ionone.","definition_xrefs":["GOC:pz","EC:1.13.11.71"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"beta,beta-carotene-9',10'-cleaving oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10741","RHEA:26389"],"termid":"GO:0102076"}


id: PBO:0073109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 16C member 5","termid":"PBO:0073109"}


id: PBO:0078912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 3-1","termid":"PBO:0078912"}


id: SO:0001729
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 16th residue (a lysine), from the start of the H4 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_4_acetylation_site","termid":"SO:0001972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K16_acetylation_site","synonyms":[{"name":"H4K16 acetylation site","type":"exact"},{"name":"H4K16ac","type":"exact"}],"termid":"SO:0001729"}


id: GO:0035502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The development of the portion of the ureteric bud tube that contributes to the morphogenesis of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric part of ureteric bud development","termid":"GO:0035502"}


id: GO:0060003
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103209],"is_not":false,"summary":null,"term":"GO:0060003"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions out of a cell or organelle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"copper ion export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"copper export","type":"exact"}],"termid":"GO:0060003","terms_by_termid":{"GO:0060003":null}}


id: GO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of fibroblast cell migration. Fibroblast cell migration is accomplished by extension and retraction of a pseudopodium.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast migration","termid":"GO:0010762"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"fibroblast migration","termid":"GO:0010761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast migration","synonyms":[{"name":"positive regulation of fibroblast cell migration","type":"exact"}],"termid":"GO:0010763"}


id: PBO:0070331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 3","termid":"PBO:0070331"}


id: PBO:0034448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0034448"}


id: GO:0005615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular space","secondary_identifiers":["NIF_Subcellular:sao1425028079"],"synonyms":[{"name":"intercellular space","type":"related"}],"termid":"GO:0005615"}


id: PBO:0067532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 676, pseudogene","termid":"PBO:0067532"}


id: PBO:0064686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 22","termid":"PBO:0064686"}


id: PBO:0089765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase/AP-1 adaptor complex binding protein Mil1","termid":"PBO:0089765"}


id: GO:1900995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone binding","termid":"GO:0048039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ubiquinone-6 binding","termid":"GO:1900995"}


id: PBO:0028068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_crossover_junction_endodeoxyribonuclease_activity","termid":"PBO:0028068"}


id: PBO:0078940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 7-1","termid":"PBO:0078940"}


id: PBO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial fibrillary acidic protein","termid":"PBO:0048545"}


id: PBO:0028740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-L-ergothioneine_absent_from_cell","termid":"PBO:0028740"}


id: PBO:0079338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23","termid":"PBO:0079338"}


id: PBO:0057896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-1","termid":"PBO:0057896"}


id: PBO:0064156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IB","termid":"PBO:0064156"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: GO:1903004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["PMID:22970133","GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deubiquitination","termid":"GO:0090085"},{"relation_name":"regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"}


id: PBO:0058116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4418","termid":"PBO:0058116"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: GO:0018121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + L-asparagine = nicotinamide + N2-(ADP-D-ribosyl)-L-asparagine.","definition_xrefs":["EC:2.4.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"NAD(P)-asparagine ADP-ribosyltransferase activity","termid":"GO:0018121"}


id: GO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process.","definition_xrefs":["PMID:9891807","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent telomere shortening (obsolete GO:0001309)","synonyms":[{"name":"age-dependent telomere shortening","type":"exact"}],"termid":"GO:0001309"}


id: PBO:0028718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bipolar_index","termid":"PBO:0028718"}


id: PBO:0052201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 1","termid":"PBO:0052201"}


id: FYPO:0003016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to non-ionic osmotic stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during cellular response to non-ionic osmotic stress","synonyms":[{"name":"cell lysis during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to non-ionic osmotic stress","type":"exact"},{"name":"lysed cell in response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0003016"}


id: GO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction L-Ala-gamma-D-Glu-meso-Dap (murein tripeptide) + H2O = L-Ala-gamma-D-Glu + meso-diaminopimelate.","definition_xrefs":["GOC:dph","PMID:22970852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"murein tripeptide carboxypeptidase activity","termid":"GO:0061473"}


id: _global:towards
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","secondary_identifiers":["RO:0002503"],"termid":"_global:towards"}


id: FYPO:0001733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic spindle pole body separation is abnormal. Spindle pole body separation is the process in which duplicated spindle pole bodies detach and migrate apart within the nuclear membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body organization","termid":"FYPO:0006387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body separation","synonyms":[{"name":"abnormal mitotic SPB separation","type":"exact"},{"name":"abnormal spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body separation during vegetative growth","type":"exact"}],"termid":"FYPO:0001733"}


id: PATO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000839 relative auditory ability value (obsolete PATO:0000839)","termid":"PATO:0000839"}


id: PBO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13B (pseudogene)","termid":"PBO:0056822"}


id: GO:1904094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of autophagic cell death.","definition_xrefs":["GO_REF:0000058","PMID:25736836","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of autophagic cell death","termid":"GO:1904092"},{"relation_name":"positively_regulates","term_name":"autophagic cell death","termid":"GO:0048102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of autophagic cell death","synonyms":[{"name":"activation of autophagic cell death","type":"narrow"},{"name":"activation of programmed cell death by macroautophagy","type":"narrow"},{"name":"activation of type II programmed cell death","type":"related"},{"name":"positive regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"positive regulation of type II programmed cell death","type":"related"},{"name":"up regulation of autophagic cell death","type":"exact"},{"name":"up regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"up regulation of type II programmed cell death","type":"related"},{"name":"up-regulation of autophagic cell death","type":"exact"},{"name":"up-regulation of programmed cell death by macroautophagy","type":"exact"},{"name":"up-regulation of type II programmed cell death","type":"related"},{"name":"upregulation of autophagic cell death","type":"exact"},{"name":"upregulation of programmed cell death by macroautophagy","type":"exact"},{"name":"upregulation of type II programmed cell death","type":"related"}],"termid":"GO:1904094"}


id: GO:0016832
data:
  {"annotated_genes":["SJAG_02230","SJAG_02450","SJAG_01455","SJAG_03373","SJAG_04242","SJAG_01310","SJAG_00706","SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102517],"is_not":false,"summary":null,"term":"GO:0016832"},{"annotations":[107091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106359"},{"annotations":[100337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004150"},{"annotations":[109801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097023"},{"annotations":[72840,71313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004332"},{"annotations":[98926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033984"},{"annotations":[72003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a C-C bond in a molecule containing a hydroxyl group and a carbonyl group to form two smaller molecules, each being an aldehyde or a ketone.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_00815":null,"SJAG_01310":null,"SJAG_01455":null,"SJAG_02230":null,"SJAG_02450":null,"SJAG_03373":null,"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldehyde-lyase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:4.1.2.-","Reactome:R-HSA-200735","GO:0016228","Reactome:R-HSA-200651","Reactome:R-HSA-71249"],"synonyms":[{"name":"aldolase activity","type":"broad"}],"termid":"GO:0016832","terms_by_termid":{"GO:0004150":null,"GO:0004332":null,"GO:0008732":null,"GO:0016832":null,"GO:0033984":null,"GO:0097023":null,"GO:0106359":null}}


id: PBO:0044804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 104A","termid":"PBO:0044804"}


id: PATO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a cone (a 3-D shape with a round cross section that tapers).","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cone_(geometry)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conical","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/d/d2/Cone_3d.png"],"synonyms":[{"name":"cone-shaped","type":"exact"}],"termid":"PATO:0002021"}


id: PBO:0068594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 45, pseudogene","termid":"PBO:0068594"}


id: PBO:0039472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18B","termid":"PBO:0039472"}


id: PBO:0062719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily Q member 1","termid":"PBO:0062719"}


id: GO:0043518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA damage response, signal transduction by p53 class mediator","termid":"GO:0043516"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction by p53 class mediator","termid":"GO:1901797"},{"relation_name":"negatively_regulates","term_name":"DNA damage response, signal transduction by p53 class mediator","termid":"GO:0030330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator","type":"narrow"},{"name":"negative regulation of p53 induced by DNA damage response","type":"exact"}],"termid":"GO:0043518"}


id: PBO:0077545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 255B","termid":"PBO:0077545"}


id: PATO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000838 absolute auditory ability value (obsolete PATO:0000838)","termid":"PATO:0000838"}


id: FYPO:0000373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of RNA modification is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of RNA modification","synonyms":[{"name":"RNA modification: decreased rate","type":"related"},{"name":"decreased rate of RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA modification during vegetative growth","type":"exact"},{"name":"reduced rate of RNA modification","type":"exact"}],"termid":"FYPO:0000373"}


id: PBO:0030497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_iron-sulfur_cluster_binding","termid":"PBO:0030497"}


id: GO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of mature B cells in the peripheral lymphoid tissues: the blood, lymph nodes, spleen, and mucosal-associated lymphoid tissue.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"},{"relation_name":"is_a","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell tolerance induction","synonyms":[{"name":"peripheral B lymphocyte tolerance induction","type":"exact"},{"name":"peripheral B-cell tolerance induction","type":"exact"},{"name":"peripheral B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002451"}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: PBO:0027108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_heterochromatin_maintenance_involved_in_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027108"}


id: GO:1900723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein adenylylation","termid":"GO:1900722"},{"relation_name":"negatively_regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein adenylylation","synonyms":[{"name":"down regulation of protein AMPylation","type":"exact"},{"name":"down regulation of protein adenylation","type":"exact"},{"name":"down regulation of protein adenylylation","type":"exact"},{"name":"down regulation of protein amino acid adenylylation","type":"exact"},{"name":"down-regulation of protein AMPylation","type":"exact"},{"name":"down-regulation of protein adenylation","type":"exact"},{"name":"down-regulation of protein adenylylation","type":"exact"},{"name":"down-regulation of protein amino acid adenylylation","type":"exact"},{"name":"downregulation of protein AMPylation","type":"exact"},{"name":"downregulation of protein adenylation","type":"exact"},{"name":"downregulation of protein adenylylation","type":"exact"},{"name":"downregulation of protein amino acid adenylylation","type":"exact"},{"name":"inhibition of protein AMPylation","type":"exact"},{"name":"inhibition of protein adenylation","type":"exact"},{"name":"inhibition of protein adenylylation","type":"narrow"},{"name":"inhibition of protein amino acid adenylylation","type":"exact"},{"name":"negative regulation of protein AMPylation","type":"exact"},{"name":"negative regulation of protein adenylation","type":"exact"},{"name":"negative regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900723"}


id: FYPO:0001060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glutamate into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glutamate import during vegetative growth","termid":"FYPO:0001059"},{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased glutamate import","termid":"FYPO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased glutamate import during vegetative growth","synonyms":[{"name":"decreased L-glutamate import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-glutamate import during vegetative growth","type":"exact"},{"name":"decreased glutamate import during mitotic cell cycle","type":"related"},{"name":"decreased glutamate import into cell during vegetative growth","type":"exact"},{"name":"decreased glutamate uptake during vegetative growth","type":"exact"},{"name":"reduced glutamate import during vegetative growth","type":"exact"}],"termid":"FYPO:0001060"}


id: GO:1902784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an undecane stimulus.","definition_xrefs":["GOC:mengo_curators","GO_REF:0000071","PMID:23826995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to undecane","termid":"GO:1902784"}


id: GO:0071560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:ecd","PMID:15451575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to transforming growth factor beta","termid":"GO:0071559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to transforming growth factor beta stimulus","synonyms":[{"name":"cellular response to TGF-beta stimulus","type":"exact"},{"name":"cellular response to TGFbeta stimulus","type":"exact"}],"termid":"GO:0071560"}


id: PBO:0042504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH23 antisense RNA 1","termid":"PBO:0042504"}


id: PBO:0026873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_DNA_double-strand_break_resectioning","termid":"PBO:0026873"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: PBO:0089595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Spt16","termid":"PBO:0089595"}


id: GO:2000479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of AMPK","type":"related"},{"name":"regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"regulation of PKA","type":"related"},{"name":"regulation of PKA C","type":"related"},{"name":"regulation of STK22","type":"related"},{"name":"regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000479"}


id: GO:0061243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesonephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the mesonephric nephron epithelium, and is formed by the condensation of mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal vesicle morphogenesis","termid":"GO:0072077"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric renal vesicle morphogenesis","termid":"GO:0061243"}


id: GO:0035952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of oligopeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17005992"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of oligopeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035952)","synonyms":[{"name":"negative regulation of oligopeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of oligopeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of oligopeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035952"}


id: PBO:0091731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric small non-coding RNA","termid":"PBO:0091731"}


id: GO:0006511
data:
  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proteolysis","type":"exact"}],"termid":"GO:0006511","terms_by_termid":{"GO:0006511":null,"GO:0031145":null,"GO:0031146":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0043161":null,"GO:0043162":null,"GO:0043328":null,"GO:0071596":null,"GO:0071629":null,"GO:0071630":null,"GO:0140708":null,"GO:0180027":null,"GO:1905785":null,"GO:1905786":null,"GO:1990116":null}}


id: PBO:0051541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 6 receptor","termid":"PBO:0051541"}


id: SO:0001972
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 4 modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059","SO:ke","EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_4_acetylation_site","synonyms":[{"name":"H4ac","type":"exact"},{"name":"histone 4 acetylation site","type":"exact"}],"termid":"SO:0001972"}


id: GO:1904999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["PMID:22267480","GO_REF:0000058","GOC:TermGenie","GOC:bc","GOC:BHF_miRNA","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904996"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"},{"relation_name":"positively_regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte adhesion to arterial endothelial cell","synonyms":[{"name":"activation of leukocyte adhesion to arterial endothelial cell","type":"narrow"},{"name":"up regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"up-regulation of leukocyte adhesion to arterial endothelial cell","type":"exact"},{"name":"upregulation of leukocyte adhesion to arterial endothelial cell","type":"exact"}],"termid":"GO:1904999"}


id: GO:2000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of thymocyte migration","termid":"GO:2000411"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"negatively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"negative regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000414"}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: PBO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDV3 pseudogene 1","termid":"PBO:0042620"}


id: PBO:0057994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3918","termid":"PBO:0057994"}


id: FYPO:0004921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:11402029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal positive regulation of protein kinase activity","synonyms":[{"name":"normal activation of protein kinase activity","type":"narrow"},{"name":"normal positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"normal positive regulation of protein kinase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004921"}


id: FYPO:0006936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane at cell division site abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006936"}


id: PBO:0085431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; recognizes spermine, putrescine, and spermidine; catalyzes uptake of polyamines at alkaline pH and excretion at acidic pH; during oxidative stress exports spermine, spermidine from the cell, which controls timing of expression of stress-responsive genes; phosphorylation enhances activity and sorting to the plasma membrane","termid":"PBO:0085431"}


id: GO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + mucus glycoprotein = CoA + O-palmitoylglycoprotein.","definition_xrefs":["EC:2.3.1.142","MetaCyc:GLYCOPROTEIN-O-FATTY-ACYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"glycoprotein O-fatty-acyltransferase activity","synonyms":[{"name":"fatty-acyl-CoA:mucus-glycoprotein fatty-acyltransferase activity","type":"related"},{"name":"protein acyltransferase activity","type":"related"}],"termid":"GO:0047965"}


id: GO:0018739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA + H+.","definition_xrefs":["RHEA:11948","EC:3.1.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoyl-CoA thioesterase activity","secondary_identifiers":["MetaCyc:3.1.2.23-RXN","UM-BBD_reactionID:r0141","KEGG_REACTION:R01301"],"synonyms":[{"name":"4-hydroxybenzoyl-CoA hydrolase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA thiolesterase activity","type":"exact"}],"termid":"GO:0018739"}


id: GO:1901608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle transport along microtubule","termid":"GO:1902513"},{"relation_name":"regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle transport along microtubule","synonyms":[{"name":"regulation of microtubule-based vesicle localization","type":"exact"}],"termid":"GO:1901608"}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["GOC:jp","PMID:10882723"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: GO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact.","definition_xrefs":["EC:3.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-8853379","MetaCyc:3.2.1.96-RXN"],"synonyms":[{"name":"N,N'-diacetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"di-N-acetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-D-glucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"endo-beta-(1->4)-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase D activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase F activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase H activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase L activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-acetylglucosaminidase activity","type":"related"},{"name":"endoglycosidase H activity","type":"related"},{"name":"endoglycosidase S activity","type":"related"},{"name":"glycopeptide-D-mannosyl-4-N-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein 1,4-N-acetamidodeoxy-beta-D-glycohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosamidase activity","type":"related"}],"termid":"GO:0033925"}


id: PBO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 4","termid":"PBO:0062023"}


id: PBO:0059364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A pseudogene 1","termid":"PBO:0059364"}


id: PBO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 4","termid":"PBO:0050612"}


id: PBO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 2","termid":"PBO:0043209"}


id: FYPO:0003484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone does not occur. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PomBase:mah","GO:1990023","GO:1902967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle midzone","synonyms":[{"name":"abolished protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"protein absent from mitotic spindle midzone","type":"related"},{"name":"protein localisation to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to mitotic spindle midzone abolished","type":"exact"},{"name":"protein localization to spindle midzone abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003484"}


id: PBO:0051039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy locus","termid":"PBO:0051039"}


id: PBO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae SRP54","termid":"PBO:0016115"}


id: GO:0106399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an acyl-coenzyme A + H2O = adenosine 3',5'-bisphosphate + an acyl-4'-phosphopantetheine + 2 H+.","definition_xrefs":["PMID:32915949"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-coenzyme A diphosphatase activity (obsolete GO:0106399)","synonyms":[{"name":"acyl-CoA diphosphatase activity","type":"exact"},{"name":"acyl-CoA pyrophosphatase activity","type":"exact"},{"name":"acyl-coenzyme A pyrophosphatase activity","type":"exact"}],"termid":"GO:0106399"}


id: PBO:0041526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 87","termid":"PBO:0041526"}


id: PBO:0017412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-participates_in","termid":"PBO:0017412"}


id: SOFP:feature_property
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A general purpose relation between a biological feature and some value","definition_xrefs":["so:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_property","termid":"SOFP:feature_property"}


id: PBO:0086895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family","termid":"PBO:0086895"}


id: PBO:0035810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035810"}


id: GO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + lauroyl-CoA + oxaloacetate = (2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate + CoA + H+.","definition_xrefs":["RHEA:16605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"decylcitrate synthase activity","secondary_identifiers":["MetaCyc:DECYLCITRATE-SYNTHASE-RXN","EC:2.3.3.2","KEGG_REACTION:R03735"],"synonyms":[{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA- acylating) activity","type":"related"},{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA-acylating)","type":"related"},{"name":"2-decylcitrate synthase activity","type":"related"},{"name":"dodecanoyl-CoA:oxaloacetate C-dodecanoyltransferase (thioester-hydrolysing, 1-carboxyundecyl-forming)","type":"related"}],"termid":"GO:0050457"}


id: PBO:0089500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1764 family conserved eukaryotic protein, fungi, plants, apicomplexa","termid":"PBO:0089500"}


id: GO:0046439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"L-cysteine metabolic process","synonyms":[{"name":"L-cysteine metabolism","type":"exact"}],"termid":"GO:0046439"}


id: PBO:0046300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMX2 opposite strand/antisense RNA","termid":"PBO:0046300"}


id: PATO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of magenta color and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magenta","termid":"PATO:0000321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated magenta","synonyms":[{"name":"pale magenta","type":"exact"}],"termid":"PATO:0001276"}


id: PBO:0051012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2","termid":"PBO:0051012"}


id: PBO:0039159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4 pseudogene 6","termid":"PBO:0039159"}


id: GO:0003687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication factor (obsolete GO:0003687)","synonyms":[{"name":"DNA replication factor","type":"exact"}],"termid":"GO:0003687"}


id: GO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"fibrinogen complex","synonyms":[{"name":"fibrinogen","type":"exact"},{"name":"fibrinogen alpha chain","type":"narrow"},{"name":"fibrinogen beta chain","type":"narrow"},{"name":"fibrinogen gamma chain","type":"narrow"}],"termid":"GO:0005577"}


id: GO:0071201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.3.","definition_xrefs":["PMID:15911355","PMID:12575952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kv4.3-DPP6 channel complex","secondary_identifiers":["CORUM:599"],"synonyms":[{"name":"Kv4.3-DPPX channel complex","type":"exact"}],"termid":"GO:0071201"}


id: PBO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030813"}


id: PBO:0058971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modulator of VRAC current 1","termid":"PBO:0058971"}


id: PBO:0074214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 3","termid":"PBO:0074214"}


id: GO:0043156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Structural changes to eukaryotic chromatin occurring as a result of cation stress, an increase or decrease in the concentration of positively charged ions in the environment.","definition_xrefs":["GOC:jl","PMID:14762213","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin remodeling in response to cation stress (obsolete GO:0043156)","termid":"GO:0043156"}


id: FYPO:0003695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer free small ribosomal subunits in the cytosol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cytosolic small ribosomal subunit level","synonyms":[{"name":"cytosolic small ribosomal subunit present at decreased level","type":"exact"},{"name":"decreased 40S ribosomal subunit level","type":"exact"},{"name":"decreased cytosolic small ribosomal subunit level during mitotic cell cycle","type":"related"},{"name":"decreased cytosolic small ribosomal subunit level during vegetative growth","type":"exact"},{"name":"decreased level of cytosolic small ribosomal subunits","type":"related"},{"name":"decreased small ribosomal subunit level","type":"broad"},{"name":"reduced cytosolic small ribosomal subunit level","type":"exact"}],"termid":"FYPO:0003695"}


id: GO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of phytoalexins produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to symbiont phytoalexin production (obsolete GO:0052568)","synonyms":[{"name":"response to symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052568"}


id: PBO:0085727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance","termid":"PBO:0085727"}


id: PBO:0039765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin","termid":"PBO:0039765"}


id: GO:0034408
data:
  {"annotated_genes":["SJAG_04483","SJAG_03587","SJAG_04666","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[104623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[83308,88052],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan metabolic process","termid":"GO:0070879"},{"relation_name":"part_of","term_name":"ascospore wall biogenesis","termid":"GO:0070591"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0030437","GO:0005975","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"ascospore wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0034408","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0140748":null}}


id: GO:0051604
data:
  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id: PBO:0056912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane integral NOTCH2 associated receptor 1","termid":"PBO:0056912"}


id: PBO:0053619
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 661","termid":"PBO:0053619"}


id: PBO:0080651
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE1 G2 checkpoint kinase","termid":"PBO:0080651"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: FYPO:0004559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"viable swollen spheroid vegetative cell","synonyms":[{"name":"viable enlarged spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"viable large spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vegetative cell","type":"exact"},{"name":"viable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004559"}


id: MOD:00976
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:01072. Remap to MOD:01072.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00976 potassium salt (obsolete MOD:00976)","termid":"MOD:00976"}


id: GO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"positively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell proliferation","synonyms":[{"name":"activation of mast cell proliferation","type":"narrow"},{"name":"stimulation of mast cell proliferation","type":"narrow"},{"name":"up regulation of mast cell proliferation","type":"exact"},{"name":"up-regulation of mast cell proliferation","type":"exact"},{"name":"upregulation of mast cell proliferation","type":"exact"}],"termid":"GO:0070668"}


id: SO:1000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that reverts the sequence of a previous frameshift mutation back to the initial frame.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000110 frame_restoring_sequence_variant (obsolete SO:1000110)","synonyms":[{"name":"frame restoring mutation","type":"exact"},{"name":"frame restoring sequence variant","type":"exact"}],"termid":"SO:1000110"}


id: GO:0036010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an endosome.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endosome","synonyms":[{"name":"protein localisation in endosome","type":"exact"},{"name":"protein localization in endosome","type":"exact"}],"termid":"GO:0036010"}


id: GO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"haustorium","termid":"GO:0085035"}


id: PBO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit alpha 2","termid":"PBO:0039658"}


id: GO:0033089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation in thymus","termid":"GO:0033081"},{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"positively_regulates","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell differentiation in thymus","synonyms":[{"name":"positive regulation of T cell development in thymus","type":"related"},{"name":"positive regulation of thymic T cell differentiation","type":"exact"},{"name":"positive regulation of thymocyte cell differentiation","type":"exact"},{"name":"positive regulation of thymocyte differentiation","type":"exact"}],"termid":"GO:0033089"}


id: MOD:01159
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively attaches a residue to murein peptidoglycan by either a pentaglycine linker peptide or a peptide-like L-alanyl-D-glutamyl-2,6-diaminopimelic acid linkage.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoconjugated residue","termid":"MOD:00764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycanated residue","termid":"MOD:01159"}


id: PBO:0041308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 42","termid":"PBO:0041308"}


id: GO:0003802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of one Arg-Ile bond in factor X to form factor Xa, and on factor IX to form factor IXa beta.","definition_xrefs":["PMID:12496253"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor VIIa activity (obsolete GO:0003802)","synonyms":[{"name":"activated blood coagulation factor VII","type":"related"},{"name":"blood coagulation factor VII activity","type":"exact"},{"name":"blood-coagulation factor VIIa","type":"related"},{"name":"coagulation factor VIIa activity","type":"exact"}],"termid":"GO:0003802"}


id: MOD:00163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylaminogalactosyl)-L-serine.","definition_xrefs":["PubMed:9092502","PubMed:3086323","PubMed:16005634","PubMed:8948436","PubMed:115869","RESID:AA0154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(N-acetylamino)galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) serine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(N-acetylamino)galactosyl-L-serine","type":"exact"},{"name":"O3-(N-acetylgalactosaminyl)serine","type":"exact"},{"name":"OGalNAcSer","type":"exact"},{"name":"mucin type O-glycosylserine","type":"exact"}],"termid":"MOD:00163"}


id: PBO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 3","termid":"PBO:0080185"}


id: PBO:0018019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Mam33 (predicted)","termid":"PBO:0018019"}


id: GO:0097276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine at the level of the cell.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular creatinine homeostasis (obsolete GO:0097276)","termid":"GO:0097276"}


id: PBO:0089013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L14","termid":"PBO:0089013"}


id: GO:0032198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the transposition of miniature inverted-repeat transposable elements (MITEs).","definition_xrefs":["ISBN:1555812090","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete MITE transposition (obsolete GO:0032198)","termid":"GO:0032198"}


id: PBO:0068831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 69, pseudogene","termid":"PBO:0068831"}


id: GO:0021993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which closure points are established at multiple points and along the neural rostrocaudal axis.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of neural tube closure","termid":"GO:0021993"}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + aminoglycoside = CoA + 3-N-acetylaminoglycoside. This is acetylation of the 3-amino group of the central deoxystreptamine ring.","definition_xrefs":["GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.60","GO:0016991","MetaCyc:GENTAMICIN-3-N-ACETYLTRANSFERASE-RXN","MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN","EC:2.3.1.81"],"synonyms":[{"name":"3'-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3'-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3'-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3'-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3'-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: PBO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_alanine_level","termid":"PBO:0030578"}


id: GO:1905630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glyceraldehyde","termid":"GO:1905630"}


id: PBO:0079434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 2","termid":"PBO:0079434"}


id: PR:O13633
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily B member 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02851","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C17A3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.05c","secondary_identifiers":["UniProtKB:O13633"],"synonyms":[{"name":"Spom972h-DNAJB12","type":"exact"}],"termid":"PR:O13633"}


id: GO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away.","definition_xrefs":["GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"zygospore formation","termid":"GO:0034296"}


id: GO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome organization","termid":"GO:0007040"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phagolysosome assembly","synonyms":[{"name":"late phagosome biosynthesis","type":"related"},{"name":"late phagosome formation","type":"related"},{"name":"phagolysosome formation","type":"related"}],"termid":"GO:0001845"}


id: PBO:0085061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p","termid":"PBO:0085061"}


id: PBO:0017475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_related_to","termid":"PBO:0017475"}


id: PBO:0074037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 22","termid":"PBO:0074037"}


id: PBO:0109320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein, human endophilin A1-like ortholog","termid":"PBO:0109320"}


id: GO:1903172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of carbon dioxide at the level of the cell.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000072","PMID:16571594"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular carbon dioxide homeostasis (obsolete GO:1903172)","termid":"GO:1903172"}


id: PBO:0056222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D2","termid":"PBO:0056222"}


id: PBO:0064254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A3","termid":"PBO:0064254"}


id: PBO:0085174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega class glutathione transferase; putative cytosolic localization","termid":"PBO:0085174"}


id: PBO:0076329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 2","termid":"PBO:0076329"}


id: PBO:0029196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029196"}


id: PBO:0088865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40","termid":"PBO:0088865"}


id: GO:0060936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac fibroblast over time, from its formation to the mature state. A cardiac fibroblast is a connective tissue cell of the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell development","termid":"GO:0060936"}


id: PBO:0047488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin-fold anticodon binding domain containing 1","termid":"PBO:0047488"}


id: PBO:0074566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 20","termid":"PBO:0074566"}


id: GO:0007312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the oocyte nucleus within the cell as part of the establishment and maintenance of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","termid":"GO:0051663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oocyte nucleus migration involved in oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0008102","GO:0048128","GO:0048126","GO:0030722"],"synonyms":[{"name":"establishment of localization of oocyte nucleus during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localisation involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization during oocyte axis determination","type":"broad"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal-ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis determination","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification","type":"related"},{"name":"establishment of oocyte nucleus localization involved in oocyte dorsoventral axis specification","type":"related"},{"name":"nucleus positioning in oocyte during oocyte axis determination","type":"broad"},{"name":"oocyte axis determination, establishment of localization of nucleus","type":"broad"},{"name":"oocyte axis determination, establishment of oocyte nucleus localization","type":"broad"},{"name":"oocyte axis determination, establishment of position of nucleus","type":"broad"},{"name":"oocyte axis determination, oocyte nuclear migration","type":"exact"},{"name":"oocyte axis determination, oocyte nucleus migration","type":"exact"},{"name":"oocyte axis determination, positioning of nucleus","type":"broad"},{"name":"oocyte nuclear migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis determination","type":"exact"},{"name":"oocyte nucleus migration during oocyte axis specification","type":"related"},{"name":"oocyte nucleus positioning during oocyte axis determination","type":"broad"}],"termid":"GO:0007312"}


id: GO:0043519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"myosin II filament organization","termid":"GO:0031038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of myosin II filament organization","synonyms":[{"name":"regulation of myosin II filament assembly or disassembly","type":"related"},{"name":"regulation of myosin II filament organisation","type":"exact"}],"termid":"GO:0043519"}


id: RO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and any entity (e.g., an organism, organism population, or an organism part) that interacts with an exposure stimulus during the exposure event.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_receptor","termid":"RO:0002240"}


id: FYPO:0004507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the centromeric regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PMID:18362178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished centromeric DNA separation","synonyms":[{"name":"abolished DNA separation at centromere","type":"exact"},{"name":"abolished centromeric DNA separation during mitosis","type":"exact"},{"name":"abolished centromeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abolished centromeric DNA separation during vegetative growth","type":"exact"},{"name":"abolished mitotic centromeric DNA separation","type":"exact"},{"name":"abolished mitotic sister chromatid separation at centromere","type":"exact"},{"name":"abolished segregation of centromeric DNA","type":"related"},{"name":"abolished sister kinetochore separation","type":"related"}],"termid":"FYPO:0004507"}


id: PBO:0085072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-proteolytic ATPase of the AAA family; stimulates incorporation of the pyridoxal phosphate cofactor into Hem1p (5-aminolevulinic acid synthase); localized to the mitochondrial matrix; ortholog of vertebrate CLPX, which promotes erythropoiesis","termid":"PBO:0085072"}


id: GO:1990321
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXII) chains; type XXII collagen triple helices acts as a cell adhesion ligand for skin epithelial cells and fibroblasts.","definition_xrefs":["PMID:17876790","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXII trimer","termid":"GO:1990321"}


id: PBO:0068870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 110, pseudogene","termid":"PBO:0068870"}


id: GO:0070607
data:
  {"annotated_genes":["SJAG_00424","SJAG_00610","SJAG_04666","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98292,90529,85177,88058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: PBO:0051017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 3","termid":"PBO:0051017"}


id: GO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a parathyroid hormone receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"parathyroid hormone receptor binding","synonyms":[{"name":"parathyroid hormone receptor ligand","type":"narrow"}],"termid":"GO:0031856"}


id: GO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules.","definition_xrefs":["GOC:add","PMID:15928680","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"MHC class Ib protein complex assembly","termid":"GO:0002398"}


id: PBO:0039973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 4","termid":"PBO:0039973"}


id: PBO:0078368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 12-1","termid":"PBO:0078368"}


id: GO:0072381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin involved in neural crest cell differentiation. The Wnt signaling pathway is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in neural crest cell differentiation","termid":"GO:0072335"},{"relation_name":"is_a","term_name":"positive regulation of canonical Wnt signaling pathway","termid":"GO:0090263"},{"relation_name":"positively_regulates","term_name":"canonical Wnt signaling pathway involved in neural crest cell differentiation","termid":"GO:0044335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of canonical Wnt signaling pathway involved in neural crest cell differentiation","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway through beta-catenin involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0072381"}


id: GO:0140531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"is_a","term_name":"regulation of osmosensory signaling pathway","termid":"GO:0120027"},{"relation_name":"regulates","term_name":"osmosensory signaling MAPK cascade","termid":"GO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of osmosensory signaling MAPK cascade","termid":"GO:0140531"}


id: PBO:0085843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; non-essential gene; upregulated by and required for tolerance to 4-Methylcyclohexane methanol; induced by treatment with 8-methoxypsoralen and UVA irradiation; contains 10-11 predicted transmembrane domains","termid":"PBO:0085843"}


id: PBO:0083175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps origin of replication ARS918, partially overlaps ORF RPB3/YIL021W","termid":"PBO:0083175"}


id: PBO:0079494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 15","termid":"PBO:0079494"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:33131769","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos:(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos:(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: PATO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000871 aggressive (obsolete PATO:0000871)","termid":"PATO:0000871"}


id: PBO:0077344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 86A","termid":"PBO:0077344"}


id: GO:0009402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin resistance (obsolete GO:0009402)","synonyms":[{"name":"toxin resistance","type":"exact"}],"termid":"GO:0009402"}


id: FYPO:0002173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during the meiotic cell cycle measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic cell cycle gene mRNA during vegetative growth","type":"related"},{"name":"increased level of meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of meiotic gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of meiotic gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of meiotic nuclear division gene mRNA during vegetative growth","type":"exact"},{"name":"increased meiotic gene mRNA accumulation during vegetative growth","type":"related"},{"name":"untimely expression of gametogenic genes during mitotic growth","type":"exact"}],"termid":"FYPO:0002173"}


id: FYPO:0003221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"},{"relation_name":"is_a","term_name":"normal protein acetylation during vegetative growth","termid":"FYPO:0003362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone acetylation during vegetative growth","synonyms":[{"name":"normal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003221"}


id: FYPO:0002384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 5, 8, 12 and 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:23851719","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002384)","synonyms":[{"name":"increased histone H4 acetylation (K5, K8, K12 and K16) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5/8/12/16 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4K5, H4K8, H4K12 and H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002384"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: GO:0070237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation-induced cell death of T cells.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activation-induced cell death of T cells","termid":"GO:0070235"},{"relation_name":"positively_regulates","term_name":"activation-induced cell death of T cells","termid":"GO:0006924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation-induced cell death of T cells","synonyms":[{"name":"activation of activation-induced cell death of T cells","type":"narrow"},{"name":"positive regulation of AICD","type":"broad"},{"name":"positive regulation of activated T cell apoptosis","type":"broad"},{"name":"positive regulation of activation-induced cell death of T lymphocytes","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-cells","type":"exact"},{"name":"positive regulation of activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"positive regulation of antigen-driven apoptosis","type":"broad"},{"name":"stimulation of activation-induced cell death of T cells","type":"narrow"},{"name":"up regulation of activation-induced cell death of T cells","type":"exact"},{"name":"up-regulation of activation-induced cell death of T cells","type":"exact"},{"name":"upregulation of activation-induced cell death of T cells","type":"exact"}],"termid":"GO:0070237"}


id: PBO:0046983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member G, pseudogene","termid":"PBO:0046983"}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: PBO:0083121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol kinase; catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis; required for viability and for normal rates of lipid intermediate synthesis and protein N-glycosylation","termid":"PBO:0083121"}


id: GO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains. An example of this process is found in the Gnathostomata.","definition_xrefs":["GOC:add","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response","termid":"GO:0002820"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"negatively_regulates","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"}


id: GO:0035848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the oviduct are generated and organized. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct morphogenesis","synonyms":[{"name":"fallopian tube morphogenesis","type":"narrow"}],"termid":"GO:0035848"}


id: PBO:0053276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B2","termid":"PBO:0053276"}


id: PBO:0054399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1795","termid":"PBO:0054399"}


id: GO:0120340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 1 (RS1) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:22754630","GOC:krc","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 1","termid":"GO:0120333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"radial spoke base 1","termid":"GO:0120340"}


id: GO:1904721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:19328063"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904721)","synonyms":[{"name":"down regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"down-regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"down-regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"down-regulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"downregulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"downregulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"downregulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"downregulation of XBP1 mRNA cleavage","type":"narrow"},{"name":"downregulation of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"exact"},{"name":"inhibition of HAC1 mRNA cleavage","type":"narrow"},{"name":"inhibition of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"inhibition of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"inhibition of XBP1 mRNA cleavage","type":"narrow"},{"name":"inhibition of mRNA endonucleolytic cleavage involved in unfolded protein response","type":"narrow"},{"name":"negative regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"negative regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"negative regulation of XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:1904721"}


id: PBO:0067335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 428, pseudogene","termid":"PBO:0067335"}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: GO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an antigen peptide.","definition_xrefs":["GOC:rv","GOC:jl","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen binding","termid":"GO:0003823"},{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptide antigen binding","secondary_identifiers":["GO:0042607","GO:0042606"],"synonyms":[{"name":"endogenous peptide antigen binding","type":"narrow"},{"name":"exogenous peptide antigen binding","type":"narrow"}],"termid":"GO:0042605"}


id: GO:0042020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-23 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 receptor activity","synonyms":[{"name":"IL-23 receptor activity","type":"exact"},{"name":"IL-23R","type":"exact"}],"termid":"GO:0042020"}


id: PBO:0085845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; null mutation suppresses cdc13-1 temperature sensitivity","termid":"PBO:0085845"}


id: MOD:00141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phycoerythrobilin.","definition_xrefs":["RESID:AA0132","Unimod:388#C","PubMed:8876649","PubMed:14588022","ChEBI:15618","PubMed:3208761","PubMed:3838747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phycoerythrobilin-L-cysteine","synonyms":[{"name":"(2S,3R,16R)-18-ethenyl-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-2,7,13,17-tetramethyl-2,3,15,16-tetrahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,3,15,16-tetrahydro-2,7,13,17-tetramethyl-1,19-dioxo-(21H,22H,24H)-bilin-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phycoerythrobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"PEB","type":"exact"},{"name":"Phycoerythrobilin","type":"related"},{"name":"S-phycoerythrobilin-L-cysteine","type":"exact"},{"name":"phycoerythrobilin","type":"related"},{"name":"phycoerythrobilin cysteine adduct","type":"exact"}],"termid":"MOD:00141"}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: _global:results_in_division_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a entity and its participation in a process that results in the division of the entity into two entities of the same type.","definition_xrefs":["GOC:mtg_berkeley_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_division_of","secondary_identifiers":["GOREL:0001019"],"termid":"_global:results_in_division_of"}


id: PR:Q10359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh3 gene.","definition_xrefs":["UniProtKB:Q10359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.06c","synonyms":[{"name":"Spom972h-gmh3","type":"exact"}],"termid":"PR:Q10359"}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: PATO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000837 auditory threshold value (obsolete PATO:0000837)","termid":"PATO:0000837"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: PATO:0000846
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000846 auditory threshold (obsolete PATO:0000846)","termid":"PATO:0000846"}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: FYPO:0005675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) after cells have been exposed to methyl methanesulfonate.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during vegetative growth","synonyms":[{"name":"normal protein deubiquitination during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein deubiquitination following cellular response to MMS","type":"exact"},{"name":"normal protein deubiquitination following cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein deubiquitylation following cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005675"}


id: MOD:00100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to L-leucine amide.","definition_xrefs":["PubMed:2578459","RESID:AA0091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine amide","synonyms":[{"name":"(2S)-2-amino-4-methylpentanamide","type":"exact"},{"name":"2-amino-4-methylvaleramide","type":"exact"},{"name":"2-azanyl-4-methylpentanamide","type":"exact"},{"name":"L-leucine amide","type":"exact"},{"name":"LeuN","type":"exact"},{"name":"MOD_RES Leucine amide","type":"exact"},{"name":"alpha-aminoisocaproamide","type":"exact"},{"name":"amidated L-leucine","type":"exact"},{"name":"leucinamide","type":"exact"}],"termid":"MOD:00100"}


id: PBO:0076731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1","termid":"PBO:0076731"}


id: GO:0055113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in deuterostomic gastrulation.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"gastrulation with mouth forming second","termid":"GO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in gastrulation with mouth forming second","termid":"GO:0055113"}


id: PBO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq9 (predicted)","termid":"PBO:0002345"}


id: FYPO:0005455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere assembly occurs at one or more chromosome ends generated by a double-strand break.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere assembly","termid":"FYPO:0005454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"telomere assembly at double-strand break site","synonyms":[{"name":"de novo telomere addition at double-strand break site","type":"exact"},{"name":"telomere assembly at double-strand break site during mitotic cell cycle","type":"related"},{"name":"telomere assembly at double-strand break site during vegetative growth","type":"exact"},{"name":"telomere formation at double-strand break site","type":"exact"}],"termid":"FYPO:0005455"}


id: PBO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin E2","termid":"PBO:0042198"}


id: PBO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN8 antisense RNA 1","termid":"PBO:0043339"}


id: PBO:0029225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing","termid":"PBO:0029225"}


id: PBO:0050951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon beta 1","termid":"PBO:0050951"}


id: GO:0098539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"transport vesicle membrane","termid":"GO:0030658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of transport vesicle membrane","synonyms":[{"name":"external side of transport vesicle membrane","type":"exact"}],"termid":"GO:0098539"}


id: GO:1904510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000058","PMID:26115433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"regulation of protein localization to basolateral plasma membrane","termid":"GO:1904508"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"activation of protein localisation in basolateral plasma membrane","type":"narrow"},{"name":"activation of protein localisation to basolateral plasma membrane","type":"narrow"},{"name":"activation of protein localization in basolateral plasma membrane","type":"narrow"},{"name":"activation of protein localization to basolateral plasma membrane","type":"narrow"},{"name":"positive regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"positive regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"positive regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"up regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"up regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"up regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"up regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"up-regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"up-regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"up-regulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"up-regulation of protein localization to basolateral plasma membrane","type":"exact"},{"name":"upregulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"upregulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"upregulation of protein localization in basolateral plasma membrane","type":"exact"},{"name":"upregulation of protein localization to basolateral plasma membrane","type":"exact"}],"termid":"GO:1904510"}


id: GO:0004993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting the signal across the membrane by activating an associated G-protein. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor activity","secondary_identifiers":["GO:0016609","Wikipedia:5-HT_receptor","GO:0001585"],"synonyms":[{"name":"5-HT receptor","type":"exact"},{"name":"5-hydroxytryptamine receptor","type":"exact"},{"name":"G protein coupled serotonin receptor activity","type":"exact"},{"name":"G-protein coupled serotonin receptor activity","type":"exact"}],"termid":"GO:0004993"}


id: FYPO:0003202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is not spatially and temporally coupled to division septum assembly as in wild type. The edges of the growing septum and the plasma membrane do not remain in contact, and septum assembly may be slower than ring contraction.","definition_xrefs":["PMID:24165938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"actomyosin contractile ring contraction uncoupled from septum assembly","synonyms":[{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring contraction uncoupled from septum assembly","type":"exact"}],"termid":"FYPO:0003202"}


id: GO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta(2)-isopentenyl diphosphate + ATP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-triphosphate.","definition_xrefs":["MetaCyc:RXN-4303","EC:2.5.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ATP dimethylallyltransferase activity","secondary_identifiers":["KEGG_REACTION:R08052","EC:2.5.1.-"],"synonyms":[{"name":"2-isopentenyl-diphosphate:ATP 2-isopentenyltransferase activity","type":"exact"},{"name":"2-isopentenyl-diphosphate:ATP delta2-isopentenyltransferase activity","type":"exact"},{"name":"ATP isopentenyltransferase activity","type":"exact"},{"name":"dimethylallyl-diphosphate:ATP dimethylallyltransferase activity","type":"related"}],"termid":"GO:0052622"}


id: GO:0044067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or  temporarily subverts the host intercellular junction. Intercellular junction include tight junctions and adherens junctions.","definition_xrefs":["PMID:16102958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell-cell junction","synonyms":[{"name":"disruption of host cell-cell junction","type":"broad"},{"name":"modification by symbiont of host cell-cell junction","type":"exact"},{"name":"modification by symbiont of host intercellular junctions","type":"exact"},{"name":"modification of host cell-cell junction","type":"related"},{"name":"modification of host intercellular junctions by symbiont","type":"exact"},{"name":"symbiont-mediated disruption of host cell-cell junction","type":"related"}],"termid":"GO:0044067"}


id: PBO:0063170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 antisense RNA 2","termid":"PBO:0063170"}


id: GO:0106030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of neuronal projections into a bundle of rods, known as a fascicle.","definition_xrefs":["GOC:bc.","GOC:aruk","PMID:12761826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection fasciculation","termid":"GO:0106030"}


id: GO:1904337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ductus arteriosus closure.","definition_xrefs":["GOC:TermGenie","PMID:16303610","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ductus arteriosus closure","termid":"GO:1904335"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"ductus arteriosus closure","termid":"GO:0097070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ductus arteriosus closure","synonyms":[{"name":"activation of ductus arteriosus closure","type":"narrow"},{"name":"up regulation of ductus arteriosus closure","type":"exact"},{"name":"up-regulation of ductus arteriosus closure","type":"exact"},{"name":"upregulation of ductus arteriosus closure","type":"exact"}],"termid":"GO:1904337"}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: PBO:0062978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 like, cytoplasmic","termid":"PBO:0062978"}


id: PBO:0050713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPA (Hsp70) binding protein 1","termid":"PBO:0050713"}


id: MOD:01150
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a nedd8 protein.","definition_xrefs":["PubMed:11125103","PubMed:12612601","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylated lysine","termid":"MOD:01150"}


id: GO:0090080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands resulting in an increase in the rate or frequency of a MAPKKK cascade.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"positive regulation of MAPKKK cascade by fibroblast growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0090080"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: PBO:0063951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin induced protein","termid":"PBO:0063951"}


id: PBO:0004416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn7","termid":"PBO:0004416"}


id: MOD:00328
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 3'-end of DNA through a phosphodiester bond to form O4'-(phospho-3'-DNA)-L-tyrosine.","definition_xrefs":["RESID:AA0323","PubMed:2211714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-3'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(3'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(3'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"O4'-(phospho-3'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 3'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00328"}


id: PBO:0044599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 7","termid":"PBO:0044599"}


id: PBO:0055625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3064","termid":"PBO:0055625"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: GO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates membrane proteins with misfolded cytosolic domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Ssm4p/Doa10p.","definition_xrefs":["GOC:elh","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"Doa10p ubiquitin ligase complex","synonyms":[{"name":"Ssm4p ubiquitin ligase complex","type":"exact"}],"termid":"GO:0000837"}


id: GO:0102622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linuron + H2O = N,O-dimethylhydroxylamine + carbon dioxide + 3,4-dichloroaniline.","definition_xrefs":["EC:3.5.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"linuron hydrolase activity","secondary_identifiers":["MetaCyc:RXN-15526"],"termid":"GO:0102622"}


id: GO:0046554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-malate + NADP+ = oxaloacetate + NADPH + H+.","definition_xrefs":["EC:1.1.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"malate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:MALATE-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R00343","RHEA:10824"],"synonyms":[{"name":"(S)-malate:NADP+ oxidoreductase activity","type":"related"},{"name":"NADP malate dehydrogenase activity","type":"related"},{"name":"NADP-linked malate dehydrogenase activity","type":"related"},{"name":"NADP-malate dehydrogenase activity","type":"related"},{"name":"malate NADP dehydrogenase activity","type":"related"},{"name":"malic dehydrogenase (nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0046554"}


id: PBO:0079171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1","termid":"PBO:0079171"}


id: GO:0019227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along an axon, away from the soma.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential propagation","termid":"GO:0019227"}


id: PBO:0073663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 3","termid":"PBO:0073663"}


id: GO:0030621
data:
  {"annotated_genes":["SJAG_00531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71721],"is_not":false,"summary":null,"term":"GO:0030621"}]},"cv_name":"molecular_function","definition":"Binding to a U4 small nuclear RNA (U4 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U4 snRNA binding","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0030621","terms_by_termid":{"GO:0030621":null}}


id: PBO:0045182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B3","termid":"PBO:0045182"}


id: PBO:0028220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_splicing,_via_spliceosome","termid":"PBO:0028220"}


id: PBO:0054063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1410","termid":"PBO:0054063"}


id: GO:0018509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+ = biphenyl-2,3-diol + NADH + H+.","definition_xrefs":["EC:1.3.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase activity","secondary_identifiers":["RHEA:17033","UM-BBD_enzymeID:e0134","MetaCyc:1.3.1.56-RXN"],"synonyms":[{"name":"2,3-dihydro-2,3-dihydroxybiphenyl dehydrogenase activity","type":"exact"},{"name":"biphenyl-2,3-dihydro-2,3-diol dehydrogenase activity","type":"related"},{"name":"cis-3-phenylcyclohexa-3,5-diene-1,2-diol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018509"}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: GO:0102610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-secoisolariciresinol + UDP-alpha-D-glucose = (+)-secoisolariciresinol monoglucoside + UDP + H+.","definition_xrefs":["PMID:24678929","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"(+)-secoisolariciresinol glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15442"],"termid":"GO:0102610"}


id: GO:0097698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that occurs by base-excision repair of telomeric DNA in response to DNA damage. Telomeric sequences are particularly susceptible to oxidative DNA damage, due to their G-rich nature.","definition_xrefs":["GOC:jbu","PMID:24703901","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair","termid":"GO:0006284"},{"relation_name":"is_a","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomere maintenance via base-excision repair","termid":"GO:0097698"}


id: PBO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 1","termid":"PBO:0045496"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: PBO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 10","termid":"PBO:0072292"}


id: PBO:0089685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box protein","termid":"PBO:0089685"}


id: GO:0102243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-geranylgeraniol + ATP = H+ + all-trans-geranyl-geranyl monophosphate + ADP.","definition_xrefs":["GOC:pz","RHEA:61660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geranylgeraniol kinase activity","termid":"GO:0052671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ATP:geranylgeraniol phosphotransferase activity","secondary_identifiers":["EC:2.7.1.216","MetaCyc:RXN-12325"],"termid":"GO:0102243"}


id: FYPO:0004270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dissolution of the cell septum edging material is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell septum edging catabolic process","termid":"FYPO:0004269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell septum edging catabolic process","synonyms":[{"name":"decreased cell septum edging catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased cell septum edging catabolic process during vegetative growth","type":"exact"},{"name":"decreased cell septum edging hydrolysis","type":"exact"},{"name":"reduced cell septum edging catabolic process","type":"exact"}],"termid":"FYPO:0004270"}


id: PBO:0067162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 215, pseudogene","termid":"PBO:0067162"}


id: PATO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A yeast mating type.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating type","termid":"PATO:0001895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yeast mating type","termid":"PATO:0001337"}


id: PBO:0079729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 6 (pseudogene)","termid":"PBO:0079729"}


id: PBO:0088171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xanthine-guanine phosphoribosyl transferase; required for xanthine utilization and for optimal utilization of guanine","termid":"PBO:0088171"}


id: GO:0034508
data:
  {"annotated_genes":["SJAG_04547","SJAG_01611","SJAG_04696","SJAG_04581","SJAG_04038","SJAG_03867","SJAG_03183","SJAG_05273","SJAG_02119","SJAG_00873","SJAG_01837","SJAG_00045","SJAG_03220","SJAG_03217","SJAG_03048","SJAG_03905","SJAG_00756","SJAG_02303","SJAG_02513","SJAG_03619","SJAG_00684","SJAG_00307","SJAG_02872","SJAG_04177","SJAG_02465","SJAG_02664","SJAG_02908","SJAG_04989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90299],"is_not":false,"summary":null,"term":"GO:0034508"},{"annotations":[97523,108344,88428,94905,91056,70309,110270,78438,94665,102703,101746,84621,71358,85782,111625,113867,109433,112797,98348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034080"},{"annotations":[78414,100868,100937,107432,108772,112558],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051382"},{"annotations":[111822,97833],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00307":null,"SJAG_00684":null,"SJAG_00756":null,"SJAG_00873":null,"SJAG_01611":null,"SJAG_01837":null,"SJAG_02119":null,"SJAG_02303":null,"SJAG_02465":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03183":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03619":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04177":null,"SJAG_04547":null,"SJAG_04581":null,"SJAG_04696":null,"SJAG_04989":null,"SJAG_05273":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"centromere complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"centromere assembly","type":"exact"},{"name":"centromere organization","type":"exact"},{"name":"chromosome, centromeric region assembly","type":"exact"}],"termid":"GO:0034508","terms_by_termid":{"GO:0034080":null,"GO:0034508":null,"GO:0051382":null,"GO:1905561":null}}


id: GO:0035202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the tracheal pits, the first tube-like structures to form in the open tracheal system. Once cells are determined to their tracheal cell fate, the tracheal pits arise by invagination of each ectodermal cluster of tracheal placode cells, between 5 and 7 hours after egg laying. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:14570584","PMID:11992723","GOC:mtg_sensu","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal pit formation in open tracheal system","synonyms":[{"name":"tracheal placode invagination","type":"related"},{"name":"tracheal sac formation","type":"broad"}],"termid":"GO:0035202"}


id: GO:0097030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a centromere-specific nucleosome, a form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["GOC:jp","PMID:21412236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome binding","termid":"GO:0031491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"CENP-A containing nucleosome binding","synonyms":[{"name":"centromere-specific nucleosome binding","type":"related"},{"name":"centromeric nucleosome binding","type":"related"}],"termid":"GO:0097030"}


id: PBO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-35 (non-functional)","termid":"PBO:0051155"}


id: PBO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-Z, alpha-1,2-mannosyltransferase Smp3","termid":"PBO:0090387"}


id: GO:0032760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:15560120","PMID:10891884","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor production","termid":"GO:0032680"},{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042535","GO:1904469"],"synonyms":[{"name":"activation of tumor necrosis factor production","type":"narrow"},{"name":"positive regulation of TNF production","type":"exact"},{"name":"positive regulation of TNF secretion","type":"narrow"},{"name":"positive regulation of TNF-alpha production","type":"exact"},{"name":"positive regulation of cachectin secretion","type":"narrow"},{"name":"positive regulation of tumor necrosis factor biosynthesis","type":"narrow"},{"name":"positive regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"positive regulation of tumor necrosis factor formation","type":"narrow"},{"name":"positive regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"positive regulation of tumor necrosis factor-alpha production","type":"exact"},{"name":"stimulation of tumor necrosis factor production","type":"narrow"},{"name":"up regulation of tumor necrosis factor production","type":"exact"},{"name":"up-regulation of tumor necrosis factor production","type":"exact"},{"name":"upregulation of tumor necrosis factor production","type":"exact"}],"termid":"GO:0032760"}


id: GO:1905853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GO_REF:0000059","GOC:aruk","GOC:TermGenie","PMID:7683668","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of binding","termid":"GO:0051098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heparan sulfate binding","termid":"GO:1905853"}


id: GO:1901007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-scoulerine.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00319","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine metabolic process (obsolete GO:1901007)","synonyms":[{"name":"(S)-scoulerine metabolism","type":"exact"}],"termid":"GO:1901007"}


id: PATO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compatibility quality inhering in a bearer by virtue of the bearer's being incapable of harmonious coexistence.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compatibility","termid":"PATO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incompatible","termid":"PATO:0000345"}


id: PBO:0056073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6C","termid":"PBO:0056073"}


id: GO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of larval somatic muscle development","termid":"GO:0062229"},{"relation_name":"positively_regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval somatic muscle development","termid":"GO:0062231"}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: PBO:0041637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 D","termid":"PBO:0041637"}


id: GO:0021907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in spinal cord anterior/posterior pattern formation","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021907"}


id: PBO:0046309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease G","termid":"PBO:0046309"}


id: PBO:0081182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type and G-patch domain containing","termid":"PBO:0081182"}


id: PBO:0000573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup45","termid":"PBO:0000573"}


id: PBO:0065306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 23","termid":"PBO:0065306"}


id: GO:0015279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A ligand-gated ion channel activity which transports calcium in response to emptying of intracellular calcium stores.","definition_xrefs":["GOC:tb","PMID:15788710","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"store-operated calcium channel activity","secondary_identifiers":["Reactome:R-HSA-434798"],"termid":"GO:0015279"}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: GO:0046808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Antigenically dense structures located at the periphery of nuclei, close to but not abutting nuclear membranes. Assemblons contain the proteins for immature-capsid assembly; they are located at the periphery of a diffuse structure composed of proteins involved in DNA synthesis, which overlaps only minimally with the assemblons. More than one site can be present simultaneously.","definition_xrefs":["PMID:8676489"],"gene_count":0,"genotype_count":0,"name":"obsolete assemblon (obsolete GO:0046808)","termid":"GO:0046808"}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: CHEBI:16236
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol","termid":"CHEBI:16236"}


id: PBO:0045731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELL associated factor 1","termid":"PBO:0045731"}


id: GO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 4.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 4 production","termid":"GO:0071606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 4 production","synonyms":[{"name":"regulation of CCL4 production","type":"exact"},{"name":"regulation of MIP-1b production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071643"}


id: PBO:0079680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A pseudogene 2","termid":"PBO:0079680"}


id: GO:0044655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the phagosome, measured by the concentration of the hydrogen ion, as part of the process of phagosome maturation.","definition_xrefs":["PMID:22008230","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phagosome reneutralization","synonyms":[{"name":"phagosomal reneutralization","type":"exact"},{"name":"phagosome pH elevation","type":"exact"}],"termid":"GO:0044655"}


id: PBO:0085078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes; has mRNA binding activity","termid":"PBO:0085078"}


id: PBO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pep5/Vps11-like (predicted)","termid":"PBO:0015232"}


id: PBO:0089619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint WD repeat protein Bub3","termid":"PBO:0089619"}


id: FYPO:0002980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin binding","termid":"FYPO:0002576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"increased chromatin binding","termid":"FYPO:0002980"}


id: GO:0009554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.","definition_xrefs":["GOC:mtg_plant","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type sporogenesis","termid":"GO:0048236"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"megasporogenesis","synonyms":[{"name":"megaspore development","type":"exact"},{"name":"megaspore mother cell meiosis","type":"exact"},{"name":"meiosis of the megasporocyte","type":"exact"},{"name":"meiotic division of the megasporocyte","type":"exact"}],"termid":"GO:0009554"}


id: GO:0046492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.","definition_xrefs":["PMID:29414780","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme B metabolic process","synonyms":[{"name":"haem B metabolic process","type":"exact"},{"name":"haem B metabolism","type":"exact"},{"name":"heme B metabolism","type":"exact"},{"name":"protoheme metabolic process","type":"exact"},{"name":"protoheme metabolism","type":"exact"}],"termid":"GO:0046492"}


id: FYPO:0005080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin at centromere inner repeat","synonyms":[{"name":"normal protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere imr","type":"exact"},{"name":"normal protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005080"}


id: PBO:0028467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_cytoplasmic_microtubules","termid":"PBO:0028467"}


id: FYPO:0007105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad52 accumulates remain present for a longer time than normal during the meiotic cell cycle. Normally, Rad52 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:22292001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during meiotic cell cycle","termid":"FYPO:0007105"}


id: PBO:0064828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 8 pseudogene 1","termid":"PBO:0064828"}


id: PBO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_spindle_assembly","termid":"PBO:0031484"}


id: PBO:0040966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 37","termid":"PBO:0040966"}


id: PBO:0068284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit B","termid":"PBO:0068284"}


id: PBO:0039580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin, actin binding protein","termid":"PBO:0039580"}


id: PBO:0086558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YLR365W is not an essential gene","termid":"PBO:0086558"}


id: GO:0002945
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin Kand cyclin-dependent kinase 13 (CDK13). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:22012619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin K-CDK13 complex","synonyms":[{"name":"CycK/Cdk13 complex","type":"related"}],"termid":"GO:0002945"}


id: GO:0030753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + xanthotoxol = S-adenosyl-L-homocysteine + xanthotoxin. Xanthotoxol is also known as 8-hydroxyfuranocoumarin and xanthotoxin as 8-methoxyfuranocoumarin.","definition_xrefs":["EC:2.1.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"8-hydroxyfuranocoumarin 8-O-methyltransferase activity","secondary_identifiers":["GO:0030765","KEGG_REACTION:R02982"],"synonyms":[{"name":"S-adenosyl-L-methionine:8-hydroxyfuranocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-hydroxyfurocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:xanthotoxol O-methyltransferase activity","type":"related"},{"name":"XMT activity","type":"related"},{"name":"furanocoumarin 8-O-methyl-transferase activity","type":"related"},{"name":"furanocoumarin 8-methyltransferase activity","type":"related"},{"name":"xanthotoxol 8-O-methyltransferase activity","type":"related"},{"name":"xanthotoxol O-methyltransferase activity","type":"exact"},{"name":"xanthotoxol methyltransferase activity","type":"related"}],"termid":"GO:0030753"}


id: PBO:0070940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 48","termid":"PBO:0070940"}


id: PBO:0040948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 19","termid":"PBO:0040948"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: GO:0036320
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83925],"is_not":false,"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone P-factor and transmitting the signal across the membrane to initiate a change in cell activity. P-factor is a polypeptide of 23 residues, with the sequence Thr-Tyr-Ala-Asp-Phe-Leu-Arg-Ala-Tyr-Gln-Ser-Trp-Asn-Thr-Phe-Val-Asn-Pro-Asp-Arg-Pro-Asn-Leu, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Plus.","definition_xrefs":["PMID:8314086","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type P-factor pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P-factor mating pheromone receptor activity","type":"exact"},{"name":"P-factor receptor activity","type":"exact"}],"termid":"GO:0036320","terms_by_termid":{"GO:0036320":null}}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: PBO:0054568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1970","termid":"PBO:0054568"}


id: GO:1902160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"regulation of cyclic nucleotide-gated ion channel activity","termid":"GO:1902159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"down regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"down regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"down-regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"downregulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"inhibition of cyclic nucleotide-gated ion channel activity","type":"narrow"},{"name":"negative regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"negative regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"negative regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902160"}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: PBO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 2","termid":"PBO:0061694"}


id: GO:2000636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"positively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of primary miRNA processing","synonyms":[{"name":"positive regulation of pri-miRNA processing","type":"exact"},{"name":"positive regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000636"}


id: PBO:0017679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain (predicted)","termid":"PBO:0017679"}


id: GO:2000202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ribosomal subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleocytoplasmic transport","termid":"GO:0046824"},{"relation_name":"is_a","term_name":"positive regulation of ribonucleoprotein complex localization","termid":"GO:2000199"},{"relation_name":"is_a","term_name":"regulation of ribosomal subunit export from nucleus","termid":"GO:2000200"},{"relation_name":"positively_regulates","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006913"],"is_obsolete":false,"name":"positive regulation of ribosomal subunit export from nucleus","synonyms":[{"name":"positive regulation of ribosomal subunit export from cell nucleus","type":"exact"},{"name":"positive regulation of ribosomal subunit export out of nucleus","type":"exact"},{"name":"positive regulation of ribosomal subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"positive regulation of ribosomal subunit-nucleus export","type":"exact"},{"name":"positive regulation of ribosome export from nucleus","type":"related"}],"termid":"GO:2000202"}


id: SO:0001772
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that has been found to cause disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_phenotype","termid":"SO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease_causing_variant","synonyms":[{"name":"disease causing variant","type":"exact"}],"termid":"SO:0001772"}


id: PBO:0058561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6503","termid":"PBO:0058561"}


id: GO:0050000
data:
  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id: PBO:0066530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 5","termid":"PBO:0066530"}


id: PATO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having an equal-sided rectangular form.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"square","termid":"PATO:0000413"}


id: PATO:0000030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000030 enzyme composition (obsolete PATO:0000030)","termid":"PATO:0000030"}


id: PBO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP192 divergent transcript","termid":"PBO:0042795"}


id: PR:Q10317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med20 gene.","definition_xrefs":["UniProtKB:Q10317","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.05","synonyms":[{"name":"Spom972h-med20","type":"exact"},{"name":"mediator complex subunit 20 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10317"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: PBO:0059866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 3","termid":"PBO:0059866"}


id: PBO:0055697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLLL and CFNLAS motif containing 1","termid":"PBO:0055697"}


id: PBO:0055387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2817","termid":"PBO:0055387"}


id: PBO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p22.2)","termid":"PBO:0047889"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: PBO:0058498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692a-1","termid":"PBO:0058498"}


id: GO:0097712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles formed at the trans-Golgi network are directed to the plasma membrane surrounding the base of the cilium, including the ciliary pocket, mediated by molecules at the vesicle membrane and target membrane surfaces.","definition_xrefs":["PMID:20106869","PMID:23351793","Reactome:R-HSA-5620920.1","GOC:cilia","PMID:24814148","PMID:26485645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to periciliary membrane compartment","termid":"GO:0097712"}


id: FYPO:0007382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal double-stranded DNA binding","termid":"FYPO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000653"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding","synonyms":[{"name":"normal promoter binding","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region","type":"exact"},{"name":"normal transcription regulatory region binding","type":"exact"}],"termid":"FYPO:0007382"}


id: PBO:0065313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 36","termid":"PBO:0065313"}


id: GO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100061)","termid":"GO:0100061"}


id: GO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diferuloyl mono-(hydroxyferuloyl) spermidine + NADPH + O2 = monoferuloyl di-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072551"}


id: PBO:0041289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1r subcomponent like","termid":"PBO:0041289"}


id: GO:1990453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex involved in the disassembly and subsequent reassembly of nucleosomes. It associates with the coding region of transcriptionally active genes where it interacts with the RNA polymerase II and affects its processivity during co-transcriptional RNA processing and maturation. It exists as a functionally independent part of the NuA4 complex.","definition_xrefs":["GOC:bhm","PMID:24843044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleosome disassembly/reassembly complex","synonyms":[{"name":"eaf5/7/3 complex","type":"narrow"}],"termid":"GO:1990453"}


id: GO:1990002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxyacetone + NADP+ = H+ + methylglyoxal + NADPH.","definition_xrefs":["RHEA:27986","PMID:16077126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADPH-dependent, acetol producing)","secondary_identifiers":["MetaCyc:RXN0-4281"],"termid":"GO:1990002"}


id: PR:Q9P7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.05c gene.","definition_xrefs":["UniProtKB:Q9P7Q0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDT1-like protein C186.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.05c","synonyms":[{"name":"Spom972h-SPAC186.05c","type":"exact"}],"termid":"PR:Q9P7Q0"}


id: PBO:0029074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation","termid":"PBO:0029074"}


id: PBO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030338"}


id: PBO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex complex subunit Swc2","termid":"PBO:0003420"}


id: PBO:0029002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_histone_H3_at_centromere_inner_repeat","termid":"PBO:0029002"}


id: PBO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 2","termid":"PBO:0060694"}


id: PBO:0074568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 22","termid":"PBO:0074568"}


id: GO:0050045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-D-glucosyl-D-glucose + phosphate = D-glucose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.31","MetaCyc:LAMINARIBIOSE-PHOSPHORYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"laminaribiose phosphorylase activity","secondary_identifiers":["RHEA:16617"],"synonyms":[{"name":"3-beta-D-glucosyl-D-glucose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050045"}


id: PATO:0000929
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000929 light intensivity sensitivity (obsolete PATO:0000929)","termid":"PATO:0000929"}


id: PBO:0088779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery NADPH-dependent diflavin oxidoreductase Tah18","termid":"PBO:0088779"}


id: PBO:0088058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase; involved in proteasome-dependent degradation of aberrant nuclear proteins; targets substrates with regions of exposed hydrophobicity containing 5 or more contiguous hydrophobic residues; contains intrinsically disordered regions that contribute to substrate recognition; prefers a window of exposed hydrophobicity that causes a particular level of protein insolubility, suggesting that San1p evolved to target highly aggregation-prone proteins","termid":"PBO:0088058"}


id: GO:0051468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which a glucocorticoid hormone stimulus is received by a cell and converted into a molecular signal. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"detection of steroid hormone stimulus","termid":"GO:0051467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucocorticoid hormone stimulus","termid":"GO:0051468"}


id: PBO:0052090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 7","termid":"PBO:0052090"}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PMID:33888556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: GO:0033436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AUG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"AUG codon-amino acid adaptor activity","synonyms":[{"name":"ATG codon-amino acid adaptor activity","type":"exact"},{"name":"initiator methionine tRNA","type":"related"},{"name":"methionine tRNA","type":"related"}],"termid":"GO:0033436"}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["PomBase:mah","GO:0042125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: PBO:0063986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 20","termid":"PBO:0063986"}


id: GO:0019914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme cyclin-dependent protein kinase activating kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cyclin-dependent protein kinase activating kinase regulator activity","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019914"}


id: GO:0010700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of norepinephrine secretion","termid":"GO:0014061"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of norepinephrine secretion","termid":"GO:0010700"}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11080161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: GO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of digestive system process","termid":"GO:0060457"}


id: GO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the oriented physical partitioning and separation of a chondrocytes in the growth plate.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte division","termid":"GO:0003423"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: PBO:0057675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1266","termid":"PBO:0057675"}


id: PBO:0087213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine methyltransferase; functions along with Mht1p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio; SAM4 has a paralog, YMR321C, that arose from a single-locus duplication","termid":"PBO:0087213"}


id: PBO:0004635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal docking protein Pex14","termid":"PBO:0004635"}


id: PBO:0031339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_thiabendazole","termid":"PBO:0031339"}


id: GO:0019034
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specific locations and structures in the virus infected cell involved in replicating the viral genome.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral replication complex","termid":"GO:0019034"}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: PBO:0090087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen2","termid":"PBO:0090087"}


id: MOD:01427
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00819. Remap to MOD:00819.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01427 2-aminobutanoic acid (Abu) (obsolete MOD:01427)","synonyms":[{"name":"Abu","type":"exact"}],"termid":"MOD:01427"}


id: PBO:0077125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 4","termid":"PBO:0077125"}


id: PBO:0078919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 8-1","termid":"PBO:0078919"}


id: PBO:0075064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-27","termid":"PBO:0075064"}


id: GO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate + NAD+ = (1S,4S)-4-hydroxy-3-oxocyclohexane-1-carboxylate + H+ + NADH.","definition_xrefs":["EC:1.1.1.166","RHEA:10516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.166-RXN","KEGG_REACTION:R05315"],"synonyms":[{"name":"(-)t-3,t-4-dihydroxycyclohexane-c-1-carboxylate-NAD oxidoreductase activity","type":"related"},{"name":"(1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"dihydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"}],"termid":"GO:0047010"}


id: GO:1990134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic process in a palatal shelf epithelial cell that contributes to the shaping of the palatal shelf.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","PMID:16607638"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"},{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell apoptotic process involved in palatal shelf morphogenesis","termid":"GO:1990134"}


id: PBO:0069341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 601, pseudogene","termid":"PBO:0069341"}


id: PBO:0041629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1B antisense RNA 1","termid":"PBO:0041629"}


id: PBO:0056123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYSET pseudogene 1","termid":"PBO:0056123"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["SO:ke","PMID:6699500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: PBO:0053843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1109","termid":"PBO:0053843"}


id: PBO:0040062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex inhibitor","termid":"PBO:0040062"}


id: PBO:0058644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6773","termid":"PBO:0058644"}


id: GO:0080053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylalanine","termid":"GO:0080053"}


id: PBO:0072414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 19","termid":"PBO:0072414"}


id: GO:0030721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.","definition_xrefs":["PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spectrosome organization","synonyms":[{"name":"spectrosome organisation","type":"exact"},{"name":"spectrosome organization and biogenesis","type":"related"}],"termid":"GO:0030721"}


id: FYPO:0007456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 3' overhang single-stranded DNA endodeoxyribonuclease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased 3' overhang single-stranded DNA endodeoxyribonuclease activity","termid":"FYPO:0007456"}


id: GO:0032527
data:
  {"annotated_genes":["SJAG_00530","SJAG_03345","SJAG_03907","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72894],"is_not":false,"summary":null,"term":"GO:0032527"},{"annotations":[71468],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070863"},{"annotations":[77771,74878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_00906":null,"SJAG_03345":null,"SJAG_03907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein exit from endoplasmic reticulum","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"protein exit from ER","type":"exact"},{"name":"protein export from ER","type":"exact"},{"name":"protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0032527","terms_by_termid":{"GO:0030970":null,"GO:0032527":null,"GO:0070863":null}}


id: FYPO:0008043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the nucleus is increased during stationary phase.","definition_xrefs":["PMID:36174923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleus during stationary phase","termid":"FYPO:0008043"}


id: GO:2000250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of actin cytoskeleton reorganization.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actin cytoskeleton reorganization (obsolete GO:2000250)","synonyms":[{"name":"negative regulation of actin cytoskeleton remodeling","type":"exact"},{"name":"negative regulation of actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:2000250"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: GO:0047859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxy-L-phenylalanine = trans-caffeate + NH3.","definition_xrefs":["EC:4.3.1.11","MetaCyc:DIHYDROXYPHENYLALANINE-AMMONIA-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxyphenylalanine ammonia-lyase activity (obsolete GO:0047859)","synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase (trans-caffeate-forming)","type":"related"},{"name":"3,4-dihydroxy-L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"beta-(3,4-dihydroxyphenyl)-L-alanine (DOPA) ammonia-lyase activity","type":"related"},{"name":"dihydroxyphenylalanine ammonia-lyase activity","type":"exact"}],"termid":"GO:0047859"}


id: PBO:0077670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF14 antisense RNA 1","termid":"PBO:0077670"}


id: GO:0072524
data:
  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id: FYPO:0002441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cable retrograde transport is lower than normal. The process normally arrangement of actin cables from the periphery toward the interior of the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PMID:23051734","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable distribution","termid":"FYPO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of actin cable retrograde transport","synonyms":[{"name":"decreased rate of actin cable retrograde transport during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin cable retrograde transport during vegetative growth","type":"exact"},{"name":"decreased rate of formin-nucleated actin cable retrograde flow","type":"exact"},{"name":"decreased rate of formin-nucleated actin cable retrograde transport","type":"exact"},{"name":"reduced rate of actin cable retrograde transport","type":"exact"}],"termid":"FYPO:0002441"}


id: FYPO:0002740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}


id: GO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host rhizosphere (obsolete GO:0044136)","termid":"GO:0044136"}


id: PBO:0056956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 19b-1","termid":"PBO:0056956"}


id: FYPO:0004999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["GO:0030989","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal horsetail movement","termid":"FYPO:0003835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of horsetail movement","synonyms":[{"name":"normal duration of dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal duration of horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0004999"}


id: GO:0008108
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  {"annotated_genes":["SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72467],"is_not":false,"summary":null,"term":"GO:0008108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + UDP-D-glucose = alpha-D-glucose 1-phosphate + UDP-D-galactose.","definition_xrefs":["EC:2.7.7.12","RHEA:13989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:hexose-1-phosphate uridylyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-70361","Reactome:R-HSA-5610038","KEGG_REACTION:R00955","MetaCyc:GALACTURIDYLYLTRANS-RXN"],"synonyms":[{"name":"Gal-1-P uridylyltransferase activity","type":"broad"},{"name":"UDP-glucose-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDP-glucose:alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDPglucose-hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"UDPglucose:alpha-D-galactose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"galactose-1-phosphate uridylyltransferase activity","type":"broad"},{"name":"hexose 1-phosphate uridyltransferase activity","type":"related"},{"name":"hexose-1-phosphate uridylyltransferase activity","type":"related"},{"name":"uridyl transferase activity","type":"broad"},{"name":"uridyltransferase activity","type":"broad"},{"name":"uridylyl removing enzyme activity","type":"broad"}],"termid":"GO:0008108","terms_by_termid":{"GO:0008108":null}}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: PBO:0048922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member S","termid":"PBO:0048922"}


id: PBO:0072557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding B","termid":"PBO:0072557"}


id: PBO:0057161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302f","termid":"PBO:0057161"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: GO:1903972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:nc","GO_REF:0000058","PMID:19100238","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of response to macrophage colony-stimulating factor","termid":"GO:1903969"},{"relation_name":"regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"regulation of cellular response to macrophage colony-stimulating factor","type":"exact"}],"termid":"GO:1903972"}


id: PBO:0053536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 538","termid":"PBO:0053536"}


id: GO:0035658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that functions as a guanine nucleotide exchange factor (GEF) and converts Rab-GDP to Rab-GTP. In S. cerevisiae, this complex consists of at least Mon1 and Ccz1, and serves as a GEF for the Rab Ypt7p.","definition_xrefs":["GOC:rb","PMID:20797862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"Mon1-Ccz1 complex","termid":"GO:0035658"}


