# terms

id: PBO:0089560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec66","termid":"PBO:0089560"}


id: PBO:0081745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 675","termid":"PBO:0081745"}


id: GO:0060006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to an angular acceleration stimulus begins with an afferent nerve impulse from a receptor in the semi-circular canal and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:dph","PMID:11784757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angular vestibuloocular reflex","termid":"GO:0060006"}


id: FYPO:0008072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs over the same portion of the peri-centromere as normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19394293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"},{"relation_name":"is_a","term_name":"normal spatial extent of histone H3-K9 methylation during vegetative growth","termid":"FYPO:0008071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of histone H3-K9 methylation at peri-centromere during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation spreading at peri-centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0008072"}


id: PBO:0072622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head component 9","termid":"PBO:0072622"}


id: FYPO:0002101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an 3'-5' DNA helicase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000661"],"is_obsolete":false,"name":"abolished 3'-5' DNA helicase activity","synonyms":[{"name":"3'-5' DNA helicase activity abolished","type":"exact"}],"termid":"FYPO:0002101"}


id: PBO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 50","termid":"PBO:0039558"}


id: PBO:0065273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRR34 antisense RNA 1","termid":"PBO:0065273"}


id: PBO:0063634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 12","termid":"PBO:0063634"}


id: PR:Q9HEQ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tcg1 gene.","definition_xrefs":["UniProtKB:Q9HEQ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded TG1-3 DNA-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.11","synonyms":[{"name":"Spom972h-tcg1","type":"exact"},{"name":"meiotically up-regulated gene 187 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HEQ9"}


id: GO:0043505
data:
  {"annotated_genes":["SJAG_00307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97517],"is_not":false,"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["GOC:go_curators","PMID:16183641","PMID:15175412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"},{"relation_name":"part_of","term_name":"CENP-A containing chromatin","termid":"GO:0061638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"CENP-A containing nucleosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CENP-S-T-W-X","type":"exact"},{"name":"CNP-T-W-S-X complex","type":"exact"},{"name":"CenH3 containing nucleosome","type":"exact"},{"name":"centromere specific nucleosome","type":"related"},{"name":"centromere-specific nucleosome","type":"related"},{"name":"centromeric nucleosome","type":"related"}],"termid":"GO:0043505","terms_by_termid":{"GO:0043505":null}}


id: GO:0018947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"anaerobic organosilicon metabolism","type":"exact"},{"name":"anaerobic organosilicone metabolic process","type":"exact"},{"name":"anaerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018947"}


id: PBO:0064283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing N1","termid":"PBO:0064283"}


id: GO:0035284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the brain into a series of semi-repetitive parts or segments.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"central nervous system segmentation","termid":"GO:0035283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain segmentation","termid":"GO:0035284"}


id: GO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:dph","GOC:jl","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular component movement (obsolete GO:0051272)","synonyms":[{"name":"positive regulation of cellular component motion","type":"exact"}],"termid":"GO:0051272"}


id: PBO:0056247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored junction protein","termid":"PBO:0056247"}


id: GO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the degradation of insulin, glucagon and other polypeptides. No action on proteins.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insulysin activity (obsolete GO:0004231)","synonyms":[{"name":"IDE","type":"related"},{"name":"insulin protease activity","type":"related"},{"name":"insulin proteinase activity","type":"related"},{"name":"insulin-degrading enzyme activity","type":"related"},{"name":"insulin-degrading neutral proteinase activity","type":"related"},{"name":"insulin-glucagon protease activity","type":"related"},{"name":"insulin-specific protease activity","type":"related"},{"name":"insulinase activity","type":"related"},{"name":"insulysin activity","type":"exact"},{"name":"metalloinsulinase activity","type":"related"}],"termid":"GO:0004231"}


id: FYPO:0001686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the tubulin poison carbendazim (mecarzole; MBC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on carbendazim","synonyms":[{"name":"normal cell population growth in presence of carbendazim","type":"exact"},{"name":"normal cell population growth on carbendazim","type":"exact"},{"name":"normal cell population growth on mecarzole","type":"exact"},{"name":"normal cellular response to carbendazim","type":"related"},{"name":"normal growth on MBC","type":"exact"},{"name":"normal growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal growth on methylbenzylcarbamylate","type":"exact"},{"name":"normal vegetative cell population growth on carbendazim","type":"exact"}],"termid":"FYPO:0001686"}


id: PBO:0028183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_zinc","termid":"PBO:0028183"}


id: PBO:0031871
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP Citrate Lyase","termid":"PBO:0031871"}


id: PR:P39825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A profilin-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01076","PANTHER:PTHR11604:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.15c","secondary_identifiers":["UniProtKB:P39825"],"synonyms":[{"name":"Spom972h-PFN4","type":"exact"}],"termid":"PR:P39825"}


id: PBO:0048334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 45","termid":"PBO:0048334"}


id: PBO:0003299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor Mfm3","termid":"PBO:0003299"}


id: PBO:0071292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 15","termid":"PBO:0071292"}


id: PBO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal-less homeobox 6","termid":"PBO:0045095"}


id: PBO:0052712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 4","termid":"PBO:0052712"}


id: GO:0140788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a L-glutamate across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:29642010","PMID:27133463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-glutamate uniporter activity","secondary_identifiers":["RHEA:66336"],"synonyms":[{"name":"glutamate uniporter activity","type":"broad"}],"termid":"GO:0140788"}


id: PBO:0076747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 2","termid":"PBO:0076747"}


id: GO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of electrons from an electron donor to an electron acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transport (obsolete GO:0006118)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"electron transport","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0006118"}


id: GO:1905083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial translational elongation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25738458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"negative regulation of mitochondrial translation","termid":"GO:0070130"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational elongation","termid":"GO:1905082"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational elongation","termid":"GO:0070125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational elongation","synonyms":[{"name":"down regulation of mitochondrial translation elongation","type":"exact"},{"name":"down regulation of mitochondrial translational elongation","type":"exact"},{"name":"down-regulation of mitochondrial translation elongation","type":"exact"},{"name":"down-regulation of mitochondrial translational elongation","type":"exact"},{"name":"downregulation of mitochondrial translation elongation","type":"exact"},{"name":"downregulation of mitochondrial translational elongation","type":"exact"},{"name":"inhibition of mitochondrial translation elongation","type":"narrow"},{"name":"inhibition of mitochondrial translational elongation","type":"narrow"},{"name":"negative regulation of mitochondrial translation elongation","type":"exact"}],"termid":"GO:1905083"}


id: GO:0009139
data:
  {"annotated_genes":["SJAG_00779","SJAG_04665","SJAG_00885","SJAG_04657","SJAG_02874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[88069,91073,102620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[78867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_02874":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside diphosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside diphosphate formation","type":"exact"},{"name":"pyrimidine nucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009139","terms_by_termid":{"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0046705":null}}


id: PBO:0034210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in_attribute","termid":"PBO:0034210"}


id: PBO:0001387
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on a functional spindle assembly checkpoint","termid":"PBO:0001387"}


id: GO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052478)","synonyms":[{"name":"negative regulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052478"}


id: PBO:0005614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx3","termid":"PBO:0005614"}


id: PBO:0053404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 334","termid":"PBO:0053404"}


id: PBO:0057557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 675","termid":"PBO:0057557"}


id: GO:0009375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the oxidation of reduced ferredoxin. Hydrogenase contains iron-sulfur clusters, and some contain nickel; it can use molecular hydrogen for the reduction of a variety of substances.","definition_xrefs":["PMID:9836629","PMID:12792025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ferredoxin hydrogenase complex","termid":"GO:0009375"}


id: PBO:0059267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPL32 pseudogene 1","termid":"PBO:0059267"}


id: GO:0071708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin light chain V and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS).","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin V(D)J recombination","termid":"GO:0033152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"immunoglobulin light chain V-J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"broad"},{"name":"immunoglobulin V(D)J recombination","type":"broad"},{"name":"immunoglobulin V-J joining","type":"exact"}],"termid":"GO:0071708"}


id: GO:1990548
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102925],"is_not":false,"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which FAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14555654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transmembrane transport","termid":"GO:0035350"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"mitochondrial FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990548","terms_by_termid":{"GO:1990548":null}}


id: GO:0016208
data:
  {"annotated_genes":["SJAG_00044","SJAG_02785","SJAG_02741","SJAG_00605","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70382,73575,76811,84634,111263],"is_not":false,"summary":null,"term":"GO:0016208"}]},"cv_name":"molecular_function","definition":"Binding to AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00605":null,"SJAG_01859":null,"SJAG_02741":null,"SJAG_02785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AMP binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0016208","terms_by_termid":{"GO:0016208":null}}


id: PBO:0026827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0026827"}


id: GO:1904770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which an intramembranous bone is generated and organized.","definition_xrefs":["GOC:TermGenie","PMID:26399686","GO_REF:0000083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous bone morphogenesis","synonyms":[{"name":"intramembranous bones morphogenesis","type":"related"},{"name":"membrane bone morphogenesis","type":"related"}],"termid":"GO:1904770"}


id: PBO:0087622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the core form of RNA polymerase transcription factor TFIIH; has both protein kinase and DNA-dependent ATPase/helicase activities; essential for transcription and nucleotide excision repair; interacts with Tfb4p","termid":"PBO:0087622"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: PBO:0000715
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0000715"}


id: GO:0005999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose biosynthetic process","termid":"GO:0019322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"xylulose biosynthetic process","synonyms":[{"name":"xylulose anabolism","type":"exact"},{"name":"xylulose biosynthesis","type":"exact"},{"name":"xylulose formation","type":"exact"},{"name":"xylulose synthesis","type":"exact"}],"termid":"GO:0005999"}


id: PBO:0031152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_myo-inositol_import","termid":"PBO:0031152"}


id: PATO:0001296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical quality which obtains by the magnitude of the light emitted by the bearer.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminous flux","termid":"PATO:0001296"}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: PBO:0004379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.13","termid":"PBO:0004379"}


id: SO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 16S_rRNA, which functions as the small subunit of the ribosome in prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_16S_gene","synonyms":[{"name":"16S rRNA gene","type":"exact"},{"name":"16S_rRNA_gene","type":"exact"}],"termid":"SO:0002237"}


id: GO:0004835
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84017],"is_not":false,"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.","definition_xrefs":["EC:6.3.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tubulin-tyrosine ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17605","MetaCyc:6.3.2.25-RXN","Reactome:R-HSA-8955706"],"synonyms":[{"name":"TTL activity","type":"related"},{"name":"alpha-tubulin:L-tyrosine ligase (ADP-forming)","type":"related"},{"name":"tubulinyl-tyrosine ligase activity","type":"exact"}],"termid":"GO:0004835","terms_by_termid":{"GO:0004835":null}}


id: GO:0008773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UTP + (protein-PII) = diphosphate + uridylyl-(protein-PII).","definition_xrefs":["EC:2.7.7.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uridylyltransferase activity","termid":"GO:0070569"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"[protein-PII] uridylyltransferase activity","secondary_identifiers":["RHEA:13673","MetaCyc:URITRANS-RXN"],"synonyms":[{"name":"PII uridylyl-transferase activity","type":"related"},{"name":"UTP:[protein-PII] uridylyltransferase activity","type":"exact"},{"name":"UTP:protein-PII uridylyltransferase activity","type":"related"},{"name":"protein-PII uridylyltransferase activity","type":"related"},{"name":"uridyl removing enzyme","type":"related"},{"name":"uridylyl removing enzyme activity","type":"broad"}],"termid":"GO:0008773"}


id: GO:0048137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic divisions undergone by the primary and secondary spermatocytes to produce haploid spermatids.","definition_xrefs":["ISBN:0879694238","GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatocyte division","synonyms":[{"name":"spermatocyte cell division","type":"exact"}],"termid":"GO:0048137"}


id: PBO:0058819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7976","termid":"PBO:0058819"}


id: PBO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by temperature","termid":"PBO:0001107"}


id: MOD:00607
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7949339","Unimod:288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxoindolealanine lactone","synonyms":[{"name":"Trp->Oxolactone","type":"related"},{"name":"Tryptophan oxidation to oxolactone","type":"related"}],"termid":"MOD:00607"}


id: GO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the growth hormone receptor signaling pathway. The growth hormone receptor signaling pathway is the series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"growth hormone receptor signaling pathway","termid":"GO:0060396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of growth hormone receptor signaling pathway","synonyms":[{"name":"regulation of growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060398"}


id: PBO:0014233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted cell suface protein","termid":"PBO:0014233"}


id: PBO:0038745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4","termid":"PBO:0038745"}


id: PR:Q9HDV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP19A11.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P19A11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.07c","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBP19A11.07c","type":"exact"}],"termid":"PR:Q9HDV3"}


id: PBO:0067775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 75","termid":"PBO:0067775"}


id: PBO:0088125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane cation-chloride cotransporter (CCC); likely mediates K+ and Cl- cotransport into the vacuole; has a role in potassium homeostasis and salt tolerance; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); similar to mammalian electroneutral Na(+)-(K+)-C1- cotransporter family","termid":"PBO:0088125"}


id: PBO:0070978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 2","termid":"PBO:0070978"}


id: PBO:0072698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUS family member 1","termid":"PBO:0072698"}


id: GO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transmission of nerve impulse","synonyms":[{"name":"regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051969"}


id: PBO:0026686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_proline_level","termid":"PBO:0026686"}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: PR:P0CT61
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2302 gene.","definition_xrefs":["UniProtKB:P0CT61","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L23-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.11","synonyms":[{"name":"Spom972h-rpl2302","type":"exact"}],"termid":"PR:P0CT61"}


id: GO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a host organism activates or increases the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of viral release from host cell (obsolete GO:0044791)","termid":"GO:0044791"}


id: PBO:0052529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 2","termid":"PBO:0052529"}


id: PBO:0082116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-coA synthetase isoform; along with Acs2p, acetyl-coA synthetase isoform is the nuclear source of acetyl-coA for histone acetylation; expressed during growth on nonfermentable carbon sources and under aerobic conditions","termid":"PBO:0082116"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: PBO:0039459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD10 intronic transcript 1","termid":"PBO:0039459"}


id: PBO:0075091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 141A","termid":"PBO:0075091"}


id: PBO:0086609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086609"}


id: PBO:0086694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W","termid":"PBO:0086694"}


id: GO:0035418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell junction","termid":"GO:1902414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to synapse","synonyms":[{"name":"protein localisation to synapse","type":"exact"}],"termid":"GO:0035418"}


id: GO:0018784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["EC:3.8.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"(S)-2-haloacid dehalogenase activity","secondary_identifiers":["MetaCyc:2-HALOACID-DEHALOGENASE-RXN","RHEA:11192","UM-BBD_reactionID:r0090"],"synonyms":[{"name":"(S)-2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloacid dehalogenase activity","type":"exact"},{"name":"2-haloacid halidohydrolase activity","type":"related"},{"name":"2-haloalkanoic acid dehalogenase activity","type":"related"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"related"},{"name":"2-halocarboxylic acid dehalogenase II activity","type":"related"},{"name":"DL-2-haloacid dehalogenase activity","type":"related"},{"name":"L-2-haloacid dehalogenase activity","type":"related"},{"name":"L-DEX activity","type":"related"},{"name":"halocarboxylic acid halidohydrolase activity","type":"related"}],"termid":"GO:0018784"}


id: PBO:0057471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 589","termid":"PBO:0057471"}


id: PBO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of antiviral response","termid":"PBO:0061462"}


id: PBO:0080649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD and tetratricopeptide repeats 1","termid":"PBO:0080649"}


id: GO:0019798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah","PMID:4371784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: GO:0034715
data:
  {"annotated_genes":["SJAG_03469","SJAG_00147","SJAG_01301","SJAG_02304","SJAG_03279","SJAG_02843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72554,73625,74993,76077,77947,85206],"is_not":false,"summary":null,"term":"GO:0034715"}]},"cv_name":"cellular_component","definition":"A protein complex that contains pICln (CLNS1A) and several Sm proteins, including SmD1, SmD2, SmE, SmF, and SmG.","definition_xrefs":["GOC:mah","PMID:11713266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01301":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_03279":null,"SJAG_03469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"pICln-Sm protein complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"6S pICln complex","type":"exact"}],"termid":"GO:0034715","terms_by_termid":{"GO:0034715":null}}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: PBO:0001615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid synthase alpha subunit Lsd1","termid":"PBO:0001615"}


id: GO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactomannan, a polysaccharide composed of D-galactosyl and D-mannosyl. The mannosyl units form the backbone structure (a linear main chain) with the D-galactosyl as single side units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"galactomannan metabolic process","termid":"GO:0051069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"galactomannan catabolic process","termid":"GO:0051682"}


id: GO:0036402
data:
  {"annotated_genes":["SJAG_01131","SJAG_00766","SJAG_04477","SJAG_01544","SJAG_00712","SJAG_01489"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92320,99511,102442,105541,110371,112540],"is_not":false,"summary":null,"term":"GO:0036402"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, which promotes unfolding of protein substrates, and channel opening of the core proteasome.","definition_xrefs":["PMID:11430818","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"proteasome-activating activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.6.1.5"],"synonyms":[{"name":"ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"proteasomal ATPase activity","type":"exact"},{"name":"proteasome channel gating activity","type":"narrow"},{"name":"proteasome channel opening activity","type":"narrow"},{"name":"proteasome-activating ATPase activity","type":"exact"}],"termid":"GO:0036402","terms_by_termid":{"GO:0036402":null}}


id: GO:0030825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cGMP metabolic process (obsolete GO:0030825)","synonyms":[{"name":"activation of cGMP metabolic process","type":"narrow"},{"name":"positive regulation of cGMP metabolism","type":"exact"},{"name":"stimulation of cGMP metabolic process","type":"narrow"},{"name":"up regulation of cGMP metabolic process","type":"exact"},{"name":"up-regulation of cGMP metabolic process","type":"exact"},{"name":"upregulation of cGMP metabolic process","type":"exact"}],"termid":"GO:0030825"}


id: PATO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's forming two equal obtuse triangles with a short side in common.","definition_xrefs":["RKC:RKC","ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrow-shaped","synonyms":[{"name":"sagittate","type":"exact"}],"termid":"PATO:0001881"}


id: GO:0036265
data:
  {"annotated_genes":["SJAG_04890","SJAG_04680","SJAG_04848","SJAG_04034","SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[74834,78588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[110869,114033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an RNA molecule.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02281":null,"SJAG_04034":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0036265","terms_by_termid":{"GO:0070476":null,"GO:0106004":null,"GO:0106005":null}}


id: GO:0046712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of GDP, guanosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate catabolic process","termid":"GO:0009181"},{"relation_name":"is_a","term_name":"GDP metabolic process","termid":"GO:0046710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GDP catabolic process","synonyms":[{"name":"GDP breakdown","type":"exact"},{"name":"GDP catabolism","type":"exact"},{"name":"GDP degradation","type":"exact"}],"termid":"GO:0046712"}


id: GO:0022017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the pallium. Neuroblasts are precursor cells that give rise to neurons.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuroblast division","termid":"GO:0021873"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in pallium","termid":"GO:0022017"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: PBO:0066328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 2","termid":"PBO:0066328"}


id: PBO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 18 Y-linked","termid":"PBO:0061828"}


id: GO:2000750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"},{"relation_name":"is_a","term_name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000750"}


id: PBO:0029181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_heat_shock","termid":"PBO:0029181"}


id: PBO:0072330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 16","termid":"PBO:0072330"}


id: GO:0015155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactose from one side of a membrane to the other. Lactose is a disaccharide 4-O-beta-D-galactopyranosyl-D-glucose, and constitutes roughly 5% of the milk in almost all mammals.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lactose transmembrane transporter activity","secondary_identifiers":["GO:0019189"],"synonyms":[{"name":"lactose permease activity","type":"exact"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"}],"termid":"GO:0015155"}


id: PBO:0066441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulophagy regulator family member 2","termid":"PBO:0066441"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: MOD:00813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an threonine residue to an O-fucosylthreonine.","definition_xrefs":["RESID:AA0405","Unimod:295#T","PubMed:15189151","PubMed:1900431","PubMed:11344537","PubMed:11857757","PubMed:1740125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-fucosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) threonine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O3-fucosylthreonine","type":"exact"},{"name":"OFucThr","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00813"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:dph","GOC:tb","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of prostatic bud formation","termid":"GO:0060685"},{"relation_name":"is_a","term_name":"positive regulation of animal organ morphogenesis","termid":"GO:0110110"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"prostate induction","termid":"GO:0060514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"activation of prostate induction by androgen receptor signaling pathway","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: PBO:0084675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial asparaginyl-tRNA synthetase","termid":"PBO:0084675"}


id: GO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the spindle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of spindle location","synonyms":[{"name":"maintenance of spindle localization","type":"related"}],"termid":"GO:0051687"}


id: GO:0008753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + a quinone = NADP+ + a quinol.","definition_xrefs":["EC:1.6.5.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)H dehydrogenase (quinone) activity","termid":"GO:0003955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH dehydrogenase (quinone) activity","secondary_identifiers":["RHEA:46164","KEGG_REACTION:R07359","MetaCyc:RXN0-271"],"synonyms":[{"name":"NADPH oxidase","type":"broad"},{"name":"NADPH:(quinone-acceptor) oxidoreductase","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate (quinone) dehydrogenase","type":"related"}],"termid":"GO:0008753"}


id: SO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a transfer RNA (tRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_encoding","synonyms":[{"name":"tRNA encoding","type":"exact"}],"termid":"SO:0000663"}


id: PBO:0070011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1308, pseudogene","termid":"PBO:0070011"}


id: GO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the imaginal disc. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that rapidly develop into adult appendages during metamorphosis from larval to adult form.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}


id: GO:0004551
data:
  {"annotated_genes":["SJAG_00705","SJAG_03091"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107096],"is_not":false,"summary":null,"term":"GO:0004551"},{"annotations":[100506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000210"},{"annotations":[72236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035529"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides.","definition_xrefs":["PMID:4405504","PMID:2848456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00705":null,"SJAG_03091":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dinucleotide phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:NUCLEOTIDE-PYROPHOSPHATASE-RXN","Reactome:R-HSA-196955"],"synonyms":[{"name":"dinucleotide nucleotidohydrolase activity","type":"related"},{"name":"nucleotide diphosphatase activity","type":"broad"},{"name":"nucleotide pyrophosphatase activity","type":"exact"}],"termid":"GO:0004551","terms_by_termid":{"GO:0000210":null,"GO:0004551":null,"GO:0035529":null}}


id: GO:0060098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of the plasma membrane that is involved in the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"membrane reorganization involved in phagocytosis, engulfment","synonyms":[{"name":"membrane reorganisation involved in phagocytosis, engulfment","type":"exact"}],"termid":"GO:0060098"}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: SO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a dicistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_polycistronic_transcript","termid":"SO:0000690"},{"relation_name":"transcribed_to","term_name":"dicistronic_transcript","termid":"SO:0000079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_dicistronic_transcript","synonyms":[{"name":"gene with dicistronic transcript","type":"exact"}],"termid":"SO:0000692"}


id: FYPO:0006916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle phase transition normally (i.e. indistinguishably from wild type).","definition_xrefs":["GO:0044770","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell cycle phase transition","termid":"FYPO:0006916"}


id: PBO:0042687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region","termid":"PBO:0042687"}


id: GO:0001871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a repeating or polymeric structure, such as a polysaccharide or peptidoglycan.","definition_xrefs":["PMID:12507420","PMID:12072369","PMID:12225919","PMID:12925128","PMID:14523544"],"gene_count":0,"genotype_count":0,"name":"obsolete pattern binding (obsolete GO:0001871)","synonyms":[{"name":"pattern recognition activity","type":"broad"}],"termid":"GO:0001871"}


id: GO:0097241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["PMID:17368745","CL:0000037","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration to bone marrow","synonyms":[{"name":"hematopoietic stem cell homing","type":"broad"},{"name":"hemopoietic stem cell migration to bone marrow","type":"exact"},{"name":"progenitor cell homing","type":"broad"}],"termid":"GO:0097241"}


id: PR:Q9P797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup131 gene.","definition_xrefs":["UniProtKB:Q9P797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup131 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.06c","synonyms":[{"name":"Spom972h-nup131","type":"exact"},{"name":"nuclear pore protein nup131 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P797"}


id: PR:O94525
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC609.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ribonuclease C609.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.01","synonyms":[{"name":"Spom972h-SPBC609.01","type":"exact"}],"termid":"PR:O94525"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: GO:0060646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell of the mammary placode becomes an internal epithelial cell of the mammary gland bud. Internal cells are small and of irregular shape.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in mammary gland bud morphogenesis","termid":"GO:0060643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal mammary gland bud epithelial cell differentiation","termid":"GO:0060646"}


id: GO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ether","termid":"GO:0071362"}


id: PBO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylglucosaminyltransferase (predicted)","termid":"PBO:0000170"}


id: GO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(966) in 16S rRNA = N(2)-methylguanosine(966) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"16S rRNA (guanine(966)-N(2))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-6515","RHEA:23548","KEGG_REACTION:R07234"],"termid":"GO:0052913"}


id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GO_REF:0000021","GOC:cls","PMID:15157725","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: PBO:0050979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 25","termid":"PBO:0050979"}


id: PBO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein (predicted)","termid":"PBO:0001634"}


id: PBO:0027290
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione_peroxidase_activity","termid":"PBO:0027290"}


id: PBO:0055752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA induced by HCV, regulator of SREBF1","termid":"PBO:0055752"}


id: PBO:0067961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 263","termid":"PBO:0067961"}


id: GO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes whose promoters contain a specific sequence elements such as the unfolded protein response element (UPRE; consensus CAGCGTG) or the ER stress-response element (ERSE; CCAAN(N)9CCACG), as a result of signaling via the unfolded protein response.","definition_xrefs":["GOC:dph","GOC:mah","PMID:12042763","GOC:tb","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response (obsolete GO:0006990)","synonyms":[{"name":"positive regulation of transcription of target genes involved in unfolded protein response","type":"exact"},{"name":"unfolded protein response, activation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, positive regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, stimulation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, target gene transcriptional activation","type":"broad"},{"name":"unfolded protein response, up regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, up-regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, upregulation of target gene transcription","type":"exact"}],"termid":"GO:0006990"}


id: GO:0110045
data:
  {"annotated_genes":["SJAG_03048","SJAG_02723","SJAG_00457","SJAG_03371","SJAG_01311","SJAG_02404","SJAG_04813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97821,99864,101198,101357,102024,104583,113434],"is_not":false,"summary":null,"term":"GO:0110045"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:al","PMID:17674143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"negatively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110045","terms_by_termid":{"GO:0110045":null}}


id: GO:0015753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-xylose is transported across a lipid bilayer, from one side of a membrane to the other. D-xylose (the naturally occurring enantiomer is always D-) is a constituent of plant polysaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"D-xylose transmembrane transport","synonyms":[{"name":"D-xylose transport","type":"related"}],"termid":"GO:0015753"}


id: PR:O94407
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle sec65 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.15c","synonyms":[{"name":"Spom972h-sec65","type":"exact"}],"termid":"PR:O94407"}


id: PBO:0066864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 164","termid":"PBO:0066864"}


id: PBO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_drug_(obsolete_FYPO:0000074)","termid":"PBO:0031356"}


id: PBO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human MUTYH","termid":"PBO:0031882"}


id: GO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will differentiate into a neuroblast.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuroblast differentiation","termid":"GO:0014016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate commitment","termid":"GO:0014017"}


id: GO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming a zygote and endosperm.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}


id: PBO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome oxidase biogenesis Cmc1 (predicted)","termid":"PBO:0004056"}


id: PBO:0052453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 4 pseudogene 1","termid":"PBO:0052453"}


id: GO:2000720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000720"}


id: GO:0102161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: copal-8-ol diphosphate = 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"copal-8-ol diphosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-11772","RHEA:32703"],"termid":"GO:0102161"}


id: GO:0031627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which linear telomeric DNA is remodeled into duplex loops, by the invasion of a 3' single-stranded overhang into the duplex region.","definition_xrefs":["GOC:vw","PMID:10338214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomeric loop formation","synonyms":[{"name":"T loop biosynthesis","type":"exact"},{"name":"T loop formation","type":"exact"},{"name":"t-loop biosynthesis","type":"exact"},{"name":"t-loop formation","type":"exact"}],"termid":"GO:0031627"}


id: GO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-embryonic development","synonyms":[{"name":"down regulation of post-embryonic development","type":"exact"},{"name":"down-regulation of post-embryonic development","type":"exact"},{"name":"downregulation of post-embryonic development","type":"exact"},{"name":"inhibition of post-embryonic development","type":"narrow"}],"termid":"GO:0048581"}


id: PBO:0064721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 57","termid":"PBO:0064721"}


id: PBO:0040342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f","termid":"PBO:0040342"}


id: GO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticosterone into the circulatory system. Corticosterone is a 21-carbon steroid hormone of the corticosteroid type produced in the cortex of the adrenal glands.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"corticosterone secretion","termid":"GO:0035934"}


id: GO:0036117
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cable structure, surrounding some cell types (e.g. proximal or bronchial tubular epithelial cells), and composed of hyaluranon (HA), a ubiquitous connective tissue glycosaminoglycan.","definition_xrefs":["GOC:yaf","PMID:16900089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"hyaluranon cable","synonyms":[{"name":"HA cable","type":"exact"}],"termid":"GO:0036117"}


id: GO:1905460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular associated smooth muscle cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:26493107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell apoptotic process","termid":"GO:0034392"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell apoptotic process","termid":"GO:1905459"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell apoptotic process","termid":"GO:1905288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"down regulation of VSMC apoptosis","type":"narrow"},{"name":"down regulation of VSMC apoptotic process","type":"exact"},{"name":"down regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of VSMC apoptosis","type":"narrow"},{"name":"down-regulation of VSMC apoptotic process","type":"exact"},{"name":"down-regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"down-regulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of VSMC apoptosis","type":"narrow"},{"name":"downregulation of VSMC apoptotic process","type":"exact"},{"name":"downregulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular associated smooth muscle cell apoptotic process","type":"exact"},{"name":"downregulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"downregulation of vascular smooth muscle cell apoptotic process","type":"exact"},{"name":"inhibition of VSMC apoptosis","type":"narrow"},{"name":"inhibition of VSMC apoptotic process","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular associated smooth muscle cell apoptotic process","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell apoptotic process","type":"narrow"},{"name":"negative regulation of VSMC apoptosis","type":"narrow"},{"name":"negative regulation of VSMC apoptotic process","type":"exact"},{"name":"negative regulation of vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905460"}


id: PBO:0070648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 19","termid":"PBO:0070648"}


id: GO:0009067
data:
  {"annotated_genes":["SJAG_03614","SJAG_00432","SJAG_00714","SJAG_03102","SJAG_00869","SJAG_04459","SJAG_00502","SJAG_04042","SJAG_01466","SJAG_03692","SJAG_04425","SJAG_03671","SJAG_00881","SJAG_02388","SJAG_04688","SJAG_01955","SJAG_02832","SJAG_00395","SJAG_03306","SJAG_03312","SJAG_00419","SJAG_03152","SJAG_04305","SJAG_01404","SJAG_04549","SJAG_03881","SJAG_02290","SJAG_01630","SJAG_01061","SJAG_01574","SJAG_04953","SJAG_00234","SJAG_03141","SJAG_02689","SJAG_02972","SJAG_01702","SJAG_00309","SJAG_03712","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65772,106356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[106074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[76590,107071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[97621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[96151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[109161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[95496,91148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[77970,78620,75856,76771,77217,107673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[94546,102376,88287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[75751,70447,91925,96688,92246,74399,108672,75534,76482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[110939,73307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"},{"annotations":[71009,74109,75306,110701,101383,77812,107224,75611,71811,75359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[107225,75307,67936,101384,76127,105956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":39,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00419":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01702":null,"SJAG_01955":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03692":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04305":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aspartate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"aspartate family amino acid anabolism","type":"exact"},{"name":"aspartate family amino acid biosynthesis","type":"exact"},{"name":"aspartate family amino acid formation","type":"exact"},{"name":"aspartate family amino acid synthesis","type":"exact"}],"termid":"GO:0009067","terms_by_termid":{"GO:0006529":null,"GO:0006532":null,"GO:0009086":null,"GO:0009088":null,"GO:0009089":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1990355":null}}


id: GO:1901620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901620"}


id: GO:0007329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0007329)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"positive regulation of transcription from Pol II promoter by pheromones","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter by pheromones","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"GO:0007329"}


id: PBO:0002960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphate synthase Tps2 (predicted)","termid":"PBO:0002960"}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70855],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17453","EC:6.3.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:GLYRIBONUCSYN-RXN","Reactome:R-HSA-73814","KEGG_REACTION:R04144"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: PBO:0070230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 167 pseudogene","termid":"PBO:0070230"}


id: GO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"regulation of TLR8 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034159"}


id: GO:0006695
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75068],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"cholesterol biosynthetic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"cholesterol anabolism","type":"exact"},{"name":"cholesterol biosynthesis","type":"exact"},{"name":"cholesterol formation","type":"exact"},{"name":"cholesterol synthesis","type":"exact"}],"termid":"GO:0006695","terms_by_termid":{"GO:0045540":null}}


id: PBO:0029628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029628"}


id: GO:1900948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of isoprene metabolic process","termid":"GO:1900945"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"negatively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of isoprene biosynthetic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down regulation of isoprene biosynthetic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down-regulation of isoprene biosynthetic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"downregulation of hemiterpene biosynthesis","type":"exact"},{"name":"downregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"downregulation of isoprene biosynthetic process","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"inhibition of hemiterpene biosynthesis","type":"narrow"},{"name":"inhibition of hemiterpene biosynthetic process","type":"narrow"},{"name":"inhibition of isoprene biosynthetic process","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"negative regulation of hemiterpene biosynthesis","type":"exact"},{"name":"negative regulation of hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:1900948"}


id: PBO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3","termid":"PBO:0090495"}


id: PBO:0054183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1558","termid":"PBO:0054183"}


id: PR:O74767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10805:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.05","secondary_identifiers":["UniProtKB:O74767"],"synonyms":[{"name":"SPBC24C6.05","type":"related"},{"name":"Spom972h-COPE","type":"exact"},{"name":"epsilon-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"epsilon-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74767"}


id: FYPO:0005957
data:
  {"alleles_by_uniquename":{"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114290],"is_not":false,"summary":null,"term":"FYPO:0005957"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation during vegetative growth","termid":"FYPO:0005956"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03940":null},"genotype_count":1,"genotypes_by_uniquename":{"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein dephosphorylation during vegetative growth","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940"],"single_locus_genotype_uniquenames":["nem2delta"],"synonyms":[{"name":"decreased protein dephosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein dephosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005957","terms_by_termid":{"FYPO:0005957":null,"FYPO_EXT:0000001":null}}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: GO:0039506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in the function of a host protein via a direct interaction.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host molecular function (obsolete GO:0039506)","synonyms":[{"name":"modification by virus of host protein function","type":"exact"}],"termid":"GO:0039506"}


id: GO:0030738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tyramine = N-methyltyramine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.27","RHEA:14865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tyramine N-methyltransferase activity","secondary_identifiers":["MetaCyc:TYRAMINE-N-METHYLTRANSFERASE-RXN","KEGG_REACTION:R02384"],"synonyms":[{"name":"DIB O-methyltransferase (3,5-diiodo-4-hydroxy-benzoic acid)","type":"related"},{"name":"S-adenosyl-L-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-methionine:tyramine N-methyltransferase activity","type":"related"},{"name":"tyramine methylpherase activity","type":"related"}],"termid":"GO:0030738"}


id: GO:0061721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["PMID:24463506","PMID:14602517","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: PBO:0049142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 1","termid":"PBO:0049142"}


id: GO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the posterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"posterior mesonephric tubule development","termid":"GO:0072166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of posterior mesonephric tubule identity","termid":"GO:0072169"}


id: PBO:0044516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-2-hydroxyglutarate dehydrogenase","termid":"PBO:0044516"}


id: PBO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9 (putative)","termid":"PBO:0060533"}


id: GO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bulbus arteriosus is generated and organized. The bulbus arteriosus is an elastic cardiac chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"bulbus arteriosus development","termid":"GO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus morphogenesis","termid":"GO:0003233"}


id: PBO:0058573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6511b-1","termid":"PBO:0058573"}


id: FYPO:0007678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal sterol distribution","termid":"FYPO:0007678"}


id: PBO:0089813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-H","termid":"PBO:0089813"}


id: PBO:0082986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic and mitochondrial glutathione oxidoreductase; converts oxidized glutathione to reduced glutathione; cytosolic Glr1p is the main determinant of the glutathione redox state of the mitochondrial intermembrane space; mitochondrial Glr1p has a role in resistance to hyperoxia; protein abundance increases in response to DNA replication stress","termid":"PBO:0082986"}


id: PBO:0038557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 18","termid":"PBO:0038557"}


id: PBO:0059476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesothelin like","termid":"PBO:0059476"}


id: PBO:0068253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N5","termid":"PBO:0068253"}


id: PBO:0063900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class W","termid":"PBO:0063900"}


id: PBO:0052085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAZN antisense RNA 1","termid":"PBO:0052085"}


id: PBO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin interactor 1","termid":"PBO:0043317"}


id: GO:0052495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its second organism's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by organism of vascular system in other organism involved in symbiotic interaction (obsolete GO:0052495)","synonyms":[{"name":"occlusion by organism of vascular system in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052495"}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: PBO:0074561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 15","termid":"PBO:0074561"}


id: GO:1990000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of amyloid fibrils, insoluble fibrous protein aggregates exhibiting beta sheet structure, from proteins.","definition_xrefs":["GOC:jj","GOC:sj","PMID:21148556","PMID:29654159","PMID:22817896","GOC:ppm","PMID:28937655","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid fibril formation","synonyms":[{"name":"amyloid fibril assembly","type":"related"},{"name":"amyloid structure assembly","type":"related"},{"name":"amyloid structure formation","type":"related"}],"termid":"GO:1990000"}


id: PBO:0076720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichohyalin","termid":"PBO:0076720"}


id: PBO:0057629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1204","termid":"PBO:0057629"}


id: PBO:0024818
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of cut TWenty","termid":"PBO:0024818"}


id: GO:1903021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:12192046","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:1903021"}


id: PBO:0087040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L19B; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19B has a paralog, RPL19A, that arose from the whole genome duplication","termid":"PBO:0087040"}


id: PBO:0054337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1730","termid":"PBO:0054337"}


id: PBO:0044938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7-dehydrocholesterol reductase","termid":"PBO:0044938"}


id: PBO:0074029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 17","termid":"PBO:0074029"}


id: PBO:0057461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 580","termid":"PBO:0057461"}


id: PBO:0073072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 1","termid":"PBO:0073072"}


id: PBO:0077884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocated promoter region, nuclear basket protein","termid":"PBO:0077884"}


id: PBO:0029497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_normal_unseptated_germ_tube_morphology_(obsolete_FYPO:0002218)","termid":"PBO:0029497"}


id: GO:1904187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12200142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"transformation of host cell by virus","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transformation of host cell by virus","synonyms":[{"name":"regulation of viral transformation","type":"exact"},{"name":"regulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904187"}


id: PBO:0053713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 922","termid":"PBO:0053713"}


id: GO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is asleep.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"is_a","term_name":"sleep","termid":"GO:0030431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}


id: GO:0044157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prolongation or process extending from a host cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell projection","termid":"GO:0044157"}


id: GO:0051880
data:
  {"annotated_genes":["SJAG_01377","SJAG_03780","SJAG_04383"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95225,99397,107772],"is_not":false,"summary":null,"term":"GO:0051880"}]},"cv_name":"molecular_function","definition":"Binding to G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome.","definition_xrefs":["PMID:9512530","PMID:16142245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01377":null,"SJAG_03780":null,"SJAG_04383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"G-quadruplex DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G quadruplex DNA binding","type":"exact"},{"name":"G quartet DNA binding","type":"exact"},{"name":"G quartet binding","type":"broad"},{"name":"G-DNA binding","type":"exact"},{"name":"G-quartet DNA binding","type":"exact"},{"name":"G-quartet binding","type":"broad"},{"name":"quadruplex DNA binding","type":"exact"},{"name":"tetraplex DNA binding","type":"exact"}],"termid":"GO:0051880","terms_by_termid":{"GO:0051880":null}}


id: PBO:0061814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 4 Y-linked","termid":"PBO:0061814"}


id: PBO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaCA proton/calcium exchanger (predicted)","termid":"PBO:0005357"}


id: GO:0102376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupeol + 3 NADPH + 3 O2 + 3 H+ = betulinic acid + 3 NADP + 4 H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"lupeol 28-oxidase activity","secondary_identifiers":["MetaCyc:RXN-13507"],"termid":"GO:0102376"}


id: GO:0070198
data:
  {"annotated_genes":["SJAG_01378","SJAG_00364","SJAG_00640","SJAG_00429"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95213,96343,101999,106987],"is_not":false,"summary":null,"term":"GO:0070198"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, the telomeric region of a chromosome.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00640":null,"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chromosome, telomeric region","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to chromosome, telomeric region","type":"exact"},{"name":"protein localization to telomere","type":"exact"}],"termid":"GO:0070198","terms_by_termid":{"GO:0070198":null}}


id: PBO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_tributary_of","termid":"PBO:0034392"}


id: GO:0033176
data:
  {"annotated_genes":["SJAG_05294","SJAG_03406","SJAG_02470","SJAG_04015","SJAG_02023","SJAG_01447","SJAG_01471","SJAG_00136","SJAG_02782","SJAG_00212","SJAG_01817","SJAG_04955","SJAG_00516","SJAG_01913","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95991],"is_not":false,"summary":null,"term":"GO:0033176"},{"annotations":[99344,87699,85877,85565,91239,95433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[113784,83818,105176,98112,95507,71320,92180,94444],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient. The resulting transmembrane electrochemical potential of H+ is used to drive a variety of (i) secondary active transport systems via H+-dependent symporters and antiporters and (ii) channel-mediated transport systems. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis. V-type ATPases are found in the membranes of organelles such as vacuoles, endosomes, and lysosomes, and in the plasma membrane.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02470":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0033176","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033176":null}}


id: PBO:0001101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jmjN domain","termid":"PBO:0001101"}


id: GO:0021594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere formation","termid":"GO:0021594"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: GO:0047273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide.","definition_xrefs":["MetaCyc:2.4.1.79-RXN","EC:2.4.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactosylgalactosylglucosylceramide beta-D-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:22252","GO:0047226","Reactome:R-HSA-8878914"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:D-galactosyl-1,4-D-galactosyl-1,4-D-glucosylceramide beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide 3III-beta-N-acetyl-D-galactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta-3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:globotriaosylceramide beta1,3-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta-3GalNAc-T1 activity","type":"related"},{"name":"beta3GalNAc-T1","type":"related"},{"name":"galactosylgalactosylglucosylceramide beta-D- activity","type":"related"},{"name":"globoside synthase activity","type":"related"},{"name":"globoside synthetase activity","type":"related"},{"name":"globotriaosylceramide 3-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"globotriosylceramide beta-1,6-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-galactosylgalactosylglucosylceramide acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047273"}


id: GO:2000804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription","termid":"GO:1904594"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000804"}


id: PBO:0062057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily W member 4 pseudogene","termid":"PBO:0062057"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["EC:4.2.1.112","RHEA:17885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0591","MetaCyc:R141-RXN","KEGG_REACTION:R05380"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: PBO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (predicted)","termid":"PBO:0002602"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: GO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction to self antigens in the peripheral lymphoid tissues: blood, lymph nodes, spleen, and mucosal-associated lymphoid tissues.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral tolerance induction to self antigen","termid":"GO:0002466"}


id: PBO:0069551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 822, pseudogene","termid":"PBO:0069551"}


id: GO:0106135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"}


id: GO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte development","termid":"GO:0002063"}


id: PBO:0038773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTRT1 pseudogene 1","termid":"PBO:0038773"}


id: GO:1903126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:24554434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"negatively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0000226"],"is_obsolete":false,"name":"negative regulation of centriole-centriole cohesion","synonyms":[{"name":"down regulation of centriole-centriole cohesion","type":"exact"},{"name":"down-regulation of centriole-centriole cohesion","type":"exact"},{"name":"downregulation of centriole-centriole cohesion","type":"exact"},{"name":"inhibition of centriole-centriole cohesion","type":"narrow"}],"termid":"GO:1903126"}


id: PBO:0071814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 9","termid":"PBO:0071814"}


id: PBO:0058599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6731","termid":"PBO:0058599"}


id: PBO:0069606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 883, pseudogene","termid":"PBO:0069606"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: PBO:0003919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mc 1","termid":"PBO:0003919"}


id: GO:0047253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-B-glucosaminyl-1,2)-beta-D-mannosyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,6-beta-D-(N-acetyl-D-glucosaminyl-1,2-beta)-(N-acetyl-D-glucosaminyl-1,4-beta)-D-mannosyl-R + UDP.","definition_xrefs":["MetaCyc:2.4.1.201-RXN","EC:2.4.1.201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alpha-1,6-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["RHEA:19945"],"synonyms":[{"name":"N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase VI activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:2,6-bis(N-acetyl-beta-D-glucosaminyl)-alpha-D-mannosyl-glycoprotein 4-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"alpha-1,6-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyl-transferase activity","type":"exact"},{"name":"mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI","type":"related"},{"name":"uridine diphosphoacetylglucosamine-glycopeptide beta-1->4-acetylglucosaminyltransferase VI activity","type":"related"}],"termid":"GO:0047253"}


id: RO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides_nutrients_for","termid":"RO:0002469"}


id: GO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of muscle cell differentiation","termid":"GO:0051149"},{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"positively_regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of striated muscle cell differentiation","synonyms":[{"name":"activation of striated muscle cell differentiation","type":"narrow"},{"name":"stimulation of striated muscle cell differentiation","type":"narrow"},{"name":"up regulation of striated muscle cell differentiation","type":"exact"},{"name":"up-regulation of striated muscle cell differentiation","type":"exact"},{"name":"upregulation of striated muscle cell differentiation","type":"exact"}],"termid":"GO:0051155"}


id: GO:0030122
data:
  {"annotated_genes":["SJAG_01167","SJAG_02805","SJAG_00104","SJAG_00800"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73820,77185,103667,106851],"is_not":false,"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits, and links clathrin to the membrane surface of a vesicle, and the cargo receptors during receptor/clathrin mediated endocytosis. Vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles. In at least humans, the AP-2 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different alpha genes (alphaA and alphaC).","definition_xrefs":["GOC:mah","PMID:22022230","PMID:21097499","PMID:24322426","PMID:10611976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin adaptor complex","termid":"GO:0030131"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin coat of endocytic vesicle","termid":"GO:0030128"},{"relation_name":"part_of","term_name":"clathrin coat of coated pit","termid":"GO:0030132"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"AP-2 adaptor complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"HA2","type":"exact"},{"name":"HA2 clathrin adaptor","type":"exact"}],"termid":"GO:0030122","terms_by_termid":{"GO:0030122":null}}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: GO:0060886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of epithelial to mesenchymal transition that contributes to the shaping of the semicircular canal by effectively removing epithelial cells from the fusion plate, forming the loops of the canals.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"clearance of cells from fusion plate","termid":"GO:0060884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate by epithelial to mesenchymal transition","termid":"GO:0060886"}


id: PBO:0053898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1186","termid":"PBO:0053898"}


id: GO:0032279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of synapse occurring between an axon and a dendritic spine or dendritic shaft. Asymmetric synapses, the most abundant synapse type in the central nervous system, involve axons that contain predominantly spherical vesicles and contain a thickened postsynaptic density. Most or all synapses of this type are excitatory.","definition_xrefs":["GOC:ef","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron to neuron synapse","termid":"GO:0098984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"asymmetric synapse","synonyms":[{"name":"Gray's type I synapse","type":"exact"}],"termid":"GO:0032279"}


id: PBO:0081217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMIZ1 antisense RNA 1","termid":"PBO:0081217"}


id: PBO:0061549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic II","termid":"PBO:0061549"}


id: PBO:0065754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase L","termid":"PBO:0065754"}


id: GO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an adrenal chromaffin cell. An adrenal chromaffin cell is a neuroendocrine cell that stores epinephrine secretory vesicles.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal chromaffin cell differentiation","termid":"GO:0061104"}


id: PBO:0009107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I core factor complex subunit Rrn7","termid":"PBO:0009107"}


id: FYPO:0002215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"viable curved elongated vegetative cell","synonyms":[{"name":"curved elongated viable cell","type":"exact"},{"name":"viable curved elongated cell","type":"exact"},{"name":"viable curved elongated cell during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002215"}


id: PBO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 75","termid":"PBO:0071234"}


id: _global:causally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","secondary_identifiers":["RO:0002410"],"termid":"_global:causally_related_to"}


id: PBO:0063914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta","termid":"PBO:0063914"}


id: FYPO:0005850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah","PMID:27648579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"abolished protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization at centromere otr","type":"exact"},{"name":"abolished protein localization at centromeric outer repeat region","type":"exact"},{"name":"abolished protein localization at pericentric region","type":"related"},{"name":"abolished protein localization at pericentromeric region","type":"related"},{"name":"abolished protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"abolished protein localization to chromatin at centromere otr","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"abolished protein localization to chromatin at pericentric region","type":"related"},{"name":"abolished protein localization to chromatin at pericentromeric region","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"protein localization to heterochromatin at centromere outer repeat abolished","type":"exact"}],"termid":"FYPO:0005850"}


id: PBO:0079690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 4A","termid":"PBO:0079690"}


id: GO:0031013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin I, the inhibitory subunit of the troponin complex.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"troponin I binding","termid":"GO:0031013"}


id: PBO:0108600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_causally_upstream_of","termid":"PBO:0108600"}


id: FYPO:0003836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"reduced RNA polymerase II carboxy-terminal domain kinase activity","type":"exact"}],"termid":"FYPO:0003836"}


id: PBO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit Snt2","termid":"PBO:0001259"}


id: GO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phenylethanolamine = S-adenosyl-L-homocysteine + N-methylphenylethanolamine.","definition_xrefs":["EC:2.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-209903","RHEA:12176","MetaCyc:2.1.1.28-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:phenylethanolamine N-methyltransferase activity","type":"related"},{"name":"noradrenalin N-methyltransferase activity","type":"related"},{"name":"noradrenaline N-methyltransferase activity","type":"related"},{"name":"norepinephrine N-methyltransferase activity","type":"related"},{"name":"norepinephrine methyltransferase activity","type":"related"},{"name":"phenethanolamine N-methyltransferase activity","type":"related"},{"name":"phenethanolamine methyltransferase activity","type":"related"}],"termid":"GO:0004603"}


id: GO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a retinal cone cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell fate specification","termid":"GO:0043704"},{"relation_name":"part_of","term_name":"retinal cone cell fate commitment","termid":"GO:0046551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate specification","termid":"GO:0042672"}


id: PBO:0038842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 10","termid":"PBO:0038842"}


id: GO:0007264
data:
  {"annotated_genes":["SJAG_04464","SJAG_06270","SJAG_03936","SJAG_04776","SJAG_02514","SJAG_03353","SJAG_03361","SJAG_03376","SJAG_01386","SJAG_00883","SJAG_04455","SJAG_03342","SJAG_01188","SJAG_02520","SJAG_03048","SJAG_01790","SJAG_03681","SJAG_02379","SJAG_00229","SJAG_00082","SJAG_04597","SJAG_01805","SJAG_03508","SJAG_02232","SJAG_03592","SJAG_02169","SJAG_04943","SJAG_00526","SJAG_01464","SJAG_04468"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72247],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0046580"},{"annotations":[95086,96761,105472,111064,100426,86425,87383,89087,88552,102903,72460,91227,102598,88473],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[83327,97843,105811,85722,89432],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[100450,106283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031291"},{"annotations":[88474],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0046578"},{"annotations":[95036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007266"},{"annotations":[102460,101769,96430,84984,90027,102505,110636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031028"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase relays a signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01188":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02232":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_02520":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03353":null,"SJAG_03361":null,"SJAG_03376":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04464":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"small GTPase-mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Ras family protein signal transduction","type":"narrow"},{"name":"small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0007264","terms_by_termid":{"GO:0007266":null,"GO:0031028":null,"GO:0031030":null,"GO:0031031":null,"GO:0031291":null,"GO:0046578":null,"GO:0046580":null}}


id: GO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","secondary_identifiers":["EC:1.1.5.-"],"termid":"GO:0016901"}


id: PBO:0081838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 773","termid":"PBO:0081838"}


id: GO:0044347
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667","SJAG_03013","SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89641,95636],"is_not":false,"summary":null,"term":"GO:0044347"},{"annotations":[87421,96995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034232"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cell wall polysaccharides.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00620":null,"SJAG_00667":null,"SJAG_01017":null,"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044347","terms_by_termid":{"GO:0034232":null,"GO:0044347":null}}


id: FYPO:0006675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed during conjugation in which a pattern of transcriptional regulation that normally differs between parental genomes has the opposite parental specificity compared to normal. For example, a gene that is normally transcribed first from the P (h+) parental genome is instead transcribed from the M (h-) genome earlier.","definition_xrefs":["PomBase:mah","PMID:30089908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"reversed parental genome-dependent asymmetric transcription","synonyms":[{"name":"reversed asymmetric transcription from parental genomes","type":"exact"},{"name":"reversed parental genome-dependent transcriptional asymmetry","type":"exact"}],"termid":"FYPO:0006675"}


id: PBO:0066521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor b","termid":"PBO:0066521"}


id: PATO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000745 behavioral quality value (obsolete PATO:0000745)","termid":"PATO:0000745"}


id: PBO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 22","termid":"PBO:0047369"}


id: PBO:0004805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centractin family actin-like protein Arp1 (predicted)","termid":"PBO:0004805"}


id: PBO:0005673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uricase (predicted)","termid":"PBO:0005673"}


id: PBO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 4","termid":"PBO:0071002"}


id: FYPO:0006183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abnormal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to nucleus during meiotic prophase I","synonyms":[{"name":"abnormal protein localisation to nucleus during meiotic prophase I","type":"exact"},{"name":"abnormal protein localization to nucleus during prophase I","type":"exact"}],"termid":"FYPO:0006183"}


id: PBO:0074907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 78","termid":"PBO:0074907"}


id: PBO:0081303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF84 divergent transcript","termid":"PBO:0081303"}


id: RO:HOM0000051
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paedomorphosis that is produced by delayed growth of immature structures into the adult form.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paedomorphorsis_relationship_with","termid":"RO:HOM0000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_postdisplacement_relationship_with","synonyms":[{"name":"post-displacement","type":"exact"}],"termid":"RO:HOM0000051"}


id: GO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"positively_regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonoid biosynthetic process","synonyms":[{"name":"activation of flavonoid biosynthetic process","type":"narrow"},{"name":"positive regulation of flavonoid anabolism","type":"exact"},{"name":"positive regulation of flavonoid biosynthesis","type":"exact"},{"name":"positive regulation of flavonoid formation","type":"exact"},{"name":"positive regulation of flavonoid synthesis","type":"exact"},{"name":"stimulation of flavonoid biosynthetic process","type":"narrow"},{"name":"up regulation of flavonoid biosynthetic process","type":"exact"},{"name":"up-regulation of flavonoid biosynthetic process","type":"exact"},{"name":"upregulation of flavonoid biosynthetic process","type":"exact"}],"termid":"GO:0009963"}


id: PBO:0069496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 763, pseudogene","termid":"PBO:0069496"}


id: GO:0099030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane (obsolete GO:0099030)","termid":"GO:0099030"}


id: GO:0051734
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680","SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70799,83912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046404"},{"annotations":[89095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051736"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephosphopolynucleotide = ADP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["EC:2.7.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051731"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01791":null,"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ATP-dependent polynucleotide kinase activity","type":"related"},{"name":"polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051734","terms_by_termid":{"GO:0046404":null,"GO:0051736":null}}


id: FYPO:0005283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to inositol starvation.","definition_xrefs":["PomBase:mah","PMID:19606215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased viability upon inositol starvation","synonyms":[{"name":"increased cell population viability upon inositol starvation","type":"exact"},{"name":"increased viability during inositol starvation","type":"exact"},{"name":"increased viability upon inositol depletion","type":"exact"},{"name":"increased viability upon inositol deprivation","type":"exact"},{"name":"increased viability upon inositol limitation","type":"exact"}],"termid":"FYPO:0005283"}


id: PBO:0078104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 12","termid":"PBO:0078104"}


id: PBO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase (predicted)","termid":"PBO:0003484"}


id: PBO:0031818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_autophagy","termid":"PBO:0031818"}


id: PBO:0088930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr1","termid":"PBO:0088930"}


id: GO:0010120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole phytoalexin biosynthetic process","termid":"GO:0009700"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"camalexin metabolic process","termid":"GO:0052317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"camalexin biosynthetic process","secondary_identifiers":["MetaCyc:CAMALEXIN-SYN"],"synonyms":[{"name":"camalexin anabolism","type":"exact"},{"name":"camalexin biosynthesis","type":"exact"},{"name":"camalexin formation","type":"exact"},{"name":"camalexin synthesis","type":"exact"}],"termid":"GO:0010120"}


id: PBO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 4","termid":"PBO:0060739"}


id: PBO:0109513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UCA1 antisense RNA 1","termid":"PBO:0109513"}


id: GO:0018823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexa-1,5-diene-1-carbonyl-CoA + H2O = 6-hydroxycyclohex-1-enecarbonyl-CoA.","definition_xrefs":["EC:4.2.1.100","RHEA:21856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyclohexa-1,5-dienecarbonyl-CoA hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0203","KEGG_REACTION:R05597","MetaCyc:4.2.1.100-RXN"],"synonyms":[{"name":"6-hydroxycyclohex-1-enecarbonyl-CoA (cyclohexa-1,5-dienecarbonyl-CoA-forming)","type":"related"},{"name":"cyclohex-1,5-diene-1-carbonyl-CoA hydratase activity","type":"exact"},{"name":"cyclohexa-1,5-diene-1-carbonyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-diene-1-carboxyl-CoA hydratase activity","type":"related"},{"name":"cyclohexa-1,5-dienecarbonyl-CoA hydro-lyase activity","type":"related"},{"name":"dienoyl-CoA hydratase activity","type":"related"}],"termid":"GO:0018823"}


id: PBO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 ortholog Cpc2","termid":"PBO:0001550"}


id: GO:0099028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postynaptic endocytic zone membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postynaptic endocytic zone membrane (obsolete GO:0099028)","termid":"GO:0099028"}


id: PATO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000091 stress sensitivity (obsolete PATO:0000091)","termid":"PATO:0000091"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03446","PANTHER:PTHR11715:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: PBO:0001094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mug28","termid":"PBO:0001094"}


id: PBO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-4-phosphatase type II B","termid":"PBO:0051700"}


id: PBO:0039343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 3","termid":"PBO:0039343"}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: PBO:0045612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 23 (pseudogene)","termid":"PBO:0045612"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PBO:0058928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-2","termid":"PBO:0058928"}


id: GO:1905179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle tissue regeneration.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:23222520","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue regeneration","termid":"GO:1905178"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue regeneration","termid":"GO:0061026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue regeneration","synonyms":[{"name":"down regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"down-regulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"downregulation of cardiac muscle tissue regeneration","type":"exact"},{"name":"inhibition of cardiac muscle tissue regeneration","type":"narrow"}],"termid":"GO:1905179"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: PR:Q9Y807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC146.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C146.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.02","synonyms":[{"name":"Spom972h-SPBC146.02","type":"exact"}],"termid":"PR:Q9Y807"}


id: FYECO:0000041
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a sugar alcohol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000041 sugar alcohol added (obsolete FYECO:0000041)","termid":"FYECO:0000041"}


id: GO:0032751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-27 production","termid":"GO:0032671"},{"relation_name":"positively_regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-27 production","secondary_identifiers":["GO:0045539"],"synonyms":[{"name":"activation of interleukin-27 production","type":"narrow"},{"name":"positive regulation of IL-27 production","type":"exact"},{"name":"positive regulation of interleukin-27 anabolism","type":"narrow"},{"name":"positive regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-27 production","type":"narrow"},{"name":"up regulation of interleukin-27 production","type":"exact"},{"name":"up-regulation of interleukin-27 production","type":"exact"},{"name":"upregulation of interleukin-27 production","type":"exact"}],"termid":"GO:0032751"}


id: PBO:0003150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-AN1 type","termid":"PBO:0003150"}


id: PBO:0088011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II membrane protein required for vesicular transport; required for vesicular transport between the endoplasmic reticulum and Golgi complex; v-SNARE with similarity to synaptobrevins","termid":"PBO:0088011"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: GO:0022608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a multicellular organism to a substrate or other organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism adhesion","termid":"GO:0022608"}


id: PBO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2C2 type","termid":"PBO:0001346"}


id: RO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preys_on","termid":"RO:0002439"}


id: GO:0061797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a chloride ion by a channel that opens in response to a change in pH.","definition_xrefs":["GOC:dph","PMID:27358471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pH-gated chloride channel activity","termid":"GO:0061797"}


id: GO:0044290
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space bounded by the mitochondrial cristae membranes, continuous with the intermembrane space.","definition_xrefs":["NIF_Subcellular:sao508958414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intracristal space","termid":"GO:0044290"}


id: GO:0000336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:krc","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposition, DNA-mediated (obsolete GO:0000336)","synonyms":[{"name":"activation of DNA transposition","type":"narrow"},{"name":"positive regulation of DNA transposition","type":"exact"},{"name":"stimulation of DNA transposition","type":"narrow"},{"name":"up regulation of DNA transposition","type":"exact"},{"name":"up-regulation of DNA transposition","type":"exact"},{"name":"upregulation of DNA transposition","type":"exact"}],"termid":"GO:0000336"}


id: PATO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001067 absolute strain (obsolete PATO:0001067)","termid":"PATO:0001067"}


id: GO:0051415
data:
  {"annotated_genes":["SJAG_02886","SJAG_07018","SJAG_00856","SJAG_01756","SJAG_02761","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95576,95875,96472,101827,112082,112310],"is_not":false,"summary":null,"term":"GO:0051415"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule by the interphase microtubule organizing center during interphase, the stage of cell cycle between successive rounds of chromosome segregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0065003","GO:0000226","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule nucleation by interphase microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMTOC-mediated microtubule nucleation during interphase","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organising centre","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organizing center","type":"exact"},{"name":"interphase microtubule organizing center-mediated microtubule nucleation during interphase","type":"exact"},{"name":"microtubule nucleation during interphase by IMTOC","type":"exact"},{"name":"microtubule nucleation during interphase by interphase microtubule organizing center","type":"exact"}],"termid":"GO:0051415","terms_by_termid":{"GO:0051415":null}}


id: PBO:0064815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 6","termid":"PBO:0064815"}


id: FYPO:0006667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during G0 phase in which the size, shape, or structure of the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear morphology during G0","synonyms":[{"name":"abnormal nuclear morphology during cell quiescence","type":"exact"},{"name":"abnormal nuclear morphology during quiescence","type":"exact"},{"name":"deformed nucleus during G0","type":"exact"},{"name":"nuclear morphology defects during G0","type":"exact"}],"termid":"FYPO:0006667"}


id: GO:0061833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a tricellular tight junction.","definition_xrefs":["PMID:24889144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to tricellular tight junction","termid":"GO:0061833"}


id: PBO:0053884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1164","termid":"PBO:0053884"}


id: GO:0044470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant stopping, prevention or reduction in the frequency, rate or extent of blood coagulation in the bitten organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood coagulation in another organism","termid":"GO:0044468"},{"relation_name":"is_a","term_name":"envenomation resulting in impairment of hemostasis in another organism","termid":"GO:0044483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood coagulation in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood coagulation in other organism","type":"exact"}],"termid":"GO:0044470"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: PBO:0083965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID Complex regulatory subunit; binds GID Complex in response to glucose through interactions with complex member Vid28p; regulates fructose-1,6-bisphosphatase (FBPase) targeting to the vacuole; promotes proteasome-dependent catabolite degradation of FBPase; peripheral membrane protein located at Vid (vacuole import and degradation) vesicles","termid":"PBO:0083965"}


id: GO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxykynurenate + O2 = 5-(3-carboxylato-3-oxoprop-1-en-1-yl)-4,6-dihydroxypyridine-2-carboxylate + H+.","definition_xrefs":["EC:1.13.11.10","RHEA:23400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"7,8-dihydroxykynurenate 8,8a-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03253","MetaCyc:1.13.11.10-RXN"],"synonyms":[{"name":"7,8-dihydroxykynurenate 8,8alpha-dioxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate oxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8a-oxidoreductase (decyclizing)","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8alpha-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047069"}


id: GO:1905541
data:
  {"annotated_genes":["SJAG_03591","SJAG_05346","SJAG_02605","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87393,105827,94409,88948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0010963","GO:1902826"],"synonyms":[{"name":"regulation of L-arginine import","type":"broad"},{"name":"regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905541","terms_by_termid":{"GO:1905589":null}}


id: PBO:0028786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028786"}


id: GO:0098779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitophagy in response to mitochondrial depolarization.","definition_xrefs":["PMID:23985961","GOC:PARL","PMID:18200046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization","termid":"GO:1904925"},{"relation_name":"positively_regulates","term_name":"mitophagy","termid":"GO:0000423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"positive regulation of mitophagy in response to mitochondrial depolarization","synonyms":[{"name":"positive regulation of macromitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:0098779"}


id: GO:0007058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle during meiosis II of a meiotic cell cycle in females. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly involved in female meiosis","termid":"GO:0007056"},{"relation_name":"part_of","term_name":"female meiosis II","termid":"GO:0007147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0140013","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"spindle assembly involved in female meiosis II","synonyms":[{"name":"female meiosis II spindle assembly","type":"related"}],"termid":"GO:0007058"}


id: PBO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_nucleated_from_eMTOC_present_in_decreased_numbers","termid":"PBO:0035747"}


id: GO:1903926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bisphenol A stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22957036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bisphenol A","termid":"GO:1903925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bisphenol A","termid":"GO:1903926"}


id: GO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains and is involved in NF-kappaB activation. In humans at least, the complex comprises the ubiquitin-conjugating enzyme UBC13 and ubiquitin-conjugating enzyme variant 1A (UEV1A).","definition_xrefs":["PMID:16129784","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"UBC13-UEV1A complex","termid":"GO:0035370"}


id: FYPO:0002520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased conjugation frequency","termid":"FYPO:0000303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of conjugation with h+ cells","synonyms":[{"name":"decreased conjugation with WT h+ cells","type":"exact"},{"name":"decreased frequency of conjugation with h plus cells","type":"exact"},{"name":"decreased frequency of mating with h+ cells","type":"exact"},{"name":"reduced frequency of conjugation with h+ cells","type":"exact"}],"termid":"FYPO:0002520"}


id: PBO:0075739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54","termid":"PBO:0075739"}


id: PBO:0047858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q31)","termid":"PBO:0047858"}


id: PBO:0062147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 17","termid":"PBO:0062147"}


id: GO:0016738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which reduced flavodoxin acts as a hydrogen or electron donor and reduces dinitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor","termid":"GO:0016737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","secondary_identifiers":["EC:1.19.6.-"],"termid":"GO:0016738"}


id: PBO:0029542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_vegetative_cell_population_including_cell_with_normal_morphology_and_long_cells_(obsolete_FYPO:0002180)","termid":"PBO:0029542"}


id: PBO:0061491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRIP3 divergent transcript","termid":"PBO:0061491"}


id: GO:0090346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular organofluorine metabolic process","termid":"GO:0090346"}


id: PBO:0055470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2903","termid":"PBO:0055470"}


id: PBO:0034056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_provides_input_for","termid":"PBO:0034056"}


id: FYPO:0003853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to fluconazole. Cells stop growing (and may die) at a concentration of fluconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to fluconazole","synonyms":[{"name":"hypersensitive to fluconazole","type":"exact"},{"name":"sensitive to fluconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to fluconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0003853"}


id: PBO:0059195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X2","termid":"PBO:0059195"}


id: PBO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2226","termid":"PBO:0054813"}


id: PBO:0043672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1A","termid":"PBO:0043672"}


id: FYPO:0007207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize aspartate, and therefore requires aspartate in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for aspartate","synonyms":[{"name":"aspartate auxotrophy","type":"exact"},{"name":"growth auxotrophic for aspartate during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for aspartate during vegetative growth","type":"exact"},{"name":"growth auxotrophic for aspartatic acid","type":"exact"}],"termid":"FYPO:0007207"}


id: GO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"positively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-17 production","secondary_identifiers":["GO:0045380","GO:1905078"],"synonyms":[{"name":"activation of interleukin-17 production","type":"narrow"},{"name":"positive regulation of CTLA-8 production","type":"exact"},{"name":"positive regulation of Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"positive regulation of IL-17 production","type":"exact"},{"name":"positive regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-17 secretion","type":"narrow"},{"name":"stimulation of interleukin-17 production","type":"narrow"},{"name":"up regulation of interleukin-17 production","type":"exact"},{"name":"up-regulation of interleukin-17 production","type":"exact"},{"name":"upregulation of interleukin-17 production","type":"exact"}],"termid":"GO:0032740"}


id: GO:0045829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin production","termid":"GO:0002638"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"negative regulation of B cell activation","termid":"GO:0050869"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of isotype switching","synonyms":[{"name":"down regulation of isotype switching","type":"exact"},{"name":"down-regulation of isotype switching","type":"exact"},{"name":"downregulation of isotype switching","type":"exact"},{"name":"inhibition of isotype switching","type":"narrow"},{"name":"negative regulation of class switch recombination","type":"exact"},{"name":"negative regulation of class switching","type":"exact"},{"name":"negative regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045829"}


id: PBO:0078783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 8-1","termid":"PBO:0078783"}


id: PBO:0060980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGF antisense RNA 1","termid":"PBO:0060980"}


id: GO:1900735
data:
  {"annotated_genes":["SJAG_01253","SJAG_00910","SJAG_03484","SJAG_02380","SJAG_03802","SJAG_04191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101284,103967,104087,106634,109299,111309],"is_not":false,"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of flocculation.","definition_xrefs":["GOC:TermGenie","PMID:10591965","GOC:dgf","PMID:16568252","PMID:15466424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of flocculation","termid":"GO:0060256"},{"relation_name":"positively_regulates","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of flocculation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1900479"],"synonyms":[{"name":"activation of flocculation","type":"narrow"},{"name":"activation of flocculation via cell wall protein-carbohydrate interaction","type":"narrow"},{"name":"positive regulation of flocculation via cell wall protein-carbohydrate interaction","type":"related"},{"name":"up regulation of flocculation","type":"exact"},{"name":"up regulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"},{"name":"up-regulation of flocculation","type":"exact"},{"name":"up-regulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"},{"name":"upregulation of flocculation","type":"exact"},{"name":"upregulation of flocculation via cell wall protein-carbohydrate interaction","type":"exact"}],"termid":"GO:1900735","terms_by_termid":{"GO:1900735":null}}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: PBO:0068641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 22, pseudogene","termid":"PBO:0068641"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q69Z14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: GO:0004102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + choline = acetylcholine + CoA.","definition_xrefs":["EC:2.3.1.6","RHEA:18821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"choline O-acetyltransferase activity","secondary_identifiers":["Reactome:R-HSA-264622","KEGG_REACTION:R01023","MetaCyc:CHOLINE-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"CHOACTase activity","type":"related"},{"name":"acetyl-CoA:choline O-acetyltransferase activity","type":"related"},{"name":"choline acetylase activity","type":"related"},{"name":"choline acetyltransferase activity","type":"related"}],"termid":"GO:0004102"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: FYPO:0006908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) in the cell cycle following spore germination. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PomBase:mah","GO:0031568","PMID:872890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following spore germination","synonyms":[{"name":"normal G1 cell size control checkpoint following spore germination during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following spore germination","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following spore germination during vegetative growth","type":"exact"}],"termid":"FYPO:0006908"}


id: PBO:0046483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6 like 2","termid":"PBO:0046483"}


id: PBO:0108903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD39 pseudogene 1","termid":"PBO:0108903"}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["PMID:24187568","GOC:TermGenie","GO_REF:0000085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: GO:0043060
data:
  {"annotated_genes":["SJAG_01211","SJAG_03989","SJAG_01224","SJAG_01837","SJAG_03926","SJAG_03437","SJAG_01805","SJAG_03698","SJAG_01775","SJAG_00918","SJAG_00794","SJAG_02814","SJAG_05220","SJAG_05295","SJAG_01278","SJAG_02731","SJAG_05319","SJAG_07002","SJAG_03327","SJAG_01371","SJAG_04076","SJAG_05266","SJAG_03217","SJAG_02346","SJAG_03220","SJAG_04259","SJAG_03683","SJAG_00418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94153,96817,112192,109007,110697,85998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[111829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[89434,96821,85470,86667,93456,90898,91144,105646,94161,105200,104215,84889,96004,97893,102863,103183,104471,108460,109312,100870,105606,111087,109012,112055],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"A cell cycle process whereby homlogous chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator) by the spindle machinery and centromere/kinetochore arrangement during meiosis I chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["PMID:10809666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"meiotic metaphase I homologous chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic metaphase I chromosome alignment","type":"exact"}],"termid":"GO:0043060","terms_by_termid":{"GO:0031619":null,"GO:0051455":null,"GO:1904967":null}}


id: GO:1900963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanophenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of methanophenazine biosynthetic process","termid":"GO:1900962"},{"relation_name":"is_a","term_name":"negative regulation of methanophenazine metabolic process","termid":"GO:1900966"},{"relation_name":"negatively_regulates","term_name":"methanophenazine biosynthetic process","termid":"GO:1900630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanophenazine biosynthetic process","synonyms":[{"name":"down regulation of methanophenazine anabolism","type":"exact"},{"name":"down regulation of methanophenazine biosynthesis","type":"exact"},{"name":"down regulation of methanophenazine biosynthetic process","type":"exact"},{"name":"down regulation of methanophenazine formation","type":"exact"},{"name":"down regulation of methanophenazine synthesis","type":"exact"},{"name":"down-regulation of methanophenazine anabolism","type":"exact"},{"name":"down-regulation of methanophenazine biosynthesis","type":"exact"},{"name":"down-regulation of methanophenazine biosynthetic process","type":"exact"},{"name":"down-regulation of methanophenazine formation","type":"exact"},{"name":"down-regulation of methanophenazine synthesis","type":"exact"},{"name":"downregulation of methanophenazine anabolism","type":"exact"},{"name":"downregulation of methanophenazine biosynthesis","type":"exact"},{"name":"downregulation of methanophenazine biosynthetic process","type":"exact"},{"name":"downregulation of methanophenazine formation","type":"exact"},{"name":"downregulation of methanophenazine synthesis","type":"exact"},{"name":"inhibition of methanophenazine anabolism","type":"exact"},{"name":"inhibition of methanophenazine biosynthesis","type":"exact"},{"name":"inhibition of methanophenazine biosynthetic process","type":"narrow"},{"name":"inhibition of methanophenazine formation","type":"exact"},{"name":"inhibition of methanophenazine synthesis","type":"exact"},{"name":"negative regulation of methanophenazine anabolism","type":"exact"},{"name":"negative regulation of methanophenazine biosynthesis","type":"exact"},{"name":"negative regulation of methanophenazine formation","type":"exact"},{"name":"negative regulation of methanophenazine synthesis","type":"exact"}],"termid":"GO:1900963"}


id: PBO:0076281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse defective Rho GTPase homolog 1","termid":"PBO:0076281"}


id: PBO:0078948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 6-1","termid":"PBO:0078948"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of signal transduction in another organism","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: GO:0042491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized inner cell acquires specialized features of an auditory hair cell.","definition_xrefs":["CL:0000201","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair cell differentiation","termid":"GO:0035315"},{"relation_name":"is_a","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear auditory receptor cell differentiation","synonyms":[{"name":"auditory hair cell differentiation","type":"exact"},{"name":"auditory receptor cell differentiation","type":"related"}],"termid":"GO:0042491"}


id: PBO:0056044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listerin E3 ubiquitin protein ligase 1","termid":"PBO:0056044"}


id: GO:0051728
data:
  {"annotated_genes":["SJAG_01956","SJAG_03371","SJAG_01311","SJAG_03048","SJAG_04813","SJAG_04332","SJAG_03486","SJAG_02723","SJAG_01401","SJAG_00457","SJAG_03501","SJAG_05288","SJAG_00145","SJAG_02404","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86056],"is_not":false,"summary":null,"term":"GO:0051728"},{"annotations":[113434,97821,99864,101198,104583,101357,102024],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110045"},{"annotations":[113303,111641],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140648"},{"annotations":[90153,100307,97109,104371],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110044"},{"annotations":[90746,104373],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110046"}]},"cv_name":"biological_process","definition":"The process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"cell cycle switching","termid":"GO:0060184"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00457":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01956":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_04332":null,"SJAG_04682":null,"SJAG_04813":null,"SJAG_05288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0042061"],"synonyms":[{"name":"cell cycle switching, mitosis to meiosis","type":"narrow"},{"name":"conversion to meiosis","type":"narrow"},{"name":"conversion to meiotic cell cycle","type":"exact"},{"name":"entry into meiosis","type":"narrow"},{"name":"entry into meiotic cell cycle","type":"exact"},{"name":"initiation of meiosis","type":"narrow"},{"name":"initiation of meiotic cell cycle","type":"exact"},{"name":"meiotic entry","type":"narrow"}],"termid":"GO:0051728","terms_by_termid":{"GO:0051728":null,"GO:0110044":null,"GO:0110045":null,"GO:0110046":null,"GO:0140648":null}}


id: FYPO:0003895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: PR:Q9USJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hem12 gene.","definition_xrefs":["UniProtKB:Q9USJ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.05c","synonyms":[{"name":"Spom972h-hem12","type":"exact"},{"name":"UPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"URO-D (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ5"}


id: PBO:0056209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B4","termid":"PBO:0056209"}


id: PR:O13726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium/hydrogen exchanger 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Na(+)/H(+) antiporter C15A10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.06","secondary_identifiers":["UniProtKB:O13726"],"synonyms":[{"name":"Spom972h-SLC9A9","type":"exact"}],"termid":"PR:O13726"}


id: PBO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 1","termid":"PBO:0046524"}


id: PBO:0077302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 41B","termid":"PBO:0077302"}


id: PBO:0044447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 25, pseudogene","termid":"PBO:0044447"}


id: PBO:0049935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHIP like 1","termid":"PBO:0049935"}


id: GO:0006880
data:
  {"annotated_genes":["SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73318],"is_not":false,"summary":null,"term":"GO:0006880"}]},"cv_name":"biological_process","definition":"The process of binding or confining iron ions in an intracellular area such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of iron ion","termid":"GO:0097577"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0098771","GO:0051179"],"is_obsolete":false,"name":"intracellular sequestering of iron ion","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"intracellular iron ion retention","type":"exact"},{"name":"intracellular iron ion sequestering","type":"exact"},{"name":"intracellular iron ion sequestration","type":"exact"},{"name":"intracellular iron ion storage","type":"exact"},{"name":"intracellular retention of iron ion","type":"exact"},{"name":"intracellular sequestration of iron ion","type":"exact"},{"name":"intracellular storage of iron ion","type":"exact"}],"termid":"GO:0006880","terms_by_termid":{"GO:0006880":null}}


id: GO:0009074
data:
  {"annotated_genes":["SJAG_03743","SJAG_00493","SJAG_02734","SJAG_04842","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75752],"is_not":false,"summary":null,"term":"GO:0009074"},{"annotations":[71284,71738,73529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[102148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006572"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00493":null,"SJAG_02734":null,"SJAG_03312":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"aromatic amino acid family catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"aromatic amino acid family breakdown","type":"exact"},{"name":"aromatic amino acid family catabolism","type":"exact"},{"name":"aromatic amino acid family degradation","type":"exact"}],"termid":"GO:0009074","terms_by_termid":{"GO:0000949":null,"GO:0006572":null,"GO:0009074":null}}


id: PBO:0057374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ap","termid":"PBO:0057374"}


id: GO:0003711
data:
  {"annotated_genes":["SJAG_02691","SJAG_02097","SJAG_01707","SJAG_03481","SJAG_03211","SJAG_02238","SJAG_04353","SJAG_02209","SJAG_00483","SJAG_02393","SJAG_00540"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72303,87628,88272,89570,95424,100900,101553,102195,103247,108416,113026],"is_not":false,"summary":null,"term":"GO:0003711"}]},"cv_name":"molecular_function","definition":"A molecular function that stimulates the elongation properties of the RNA polymerase during the elongation phase of transcription. A subclass of transcription elongation factors enable the transition from transcription initiation to elongation, while another class rescue stalled RNA polymerases.","definition_xrefs":["GOC:txnOH-2018","PMID:28892040","PMID:23878398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00483":null,"SJAG_00540":null,"SJAG_01707":null,"SJAG_02097":null,"SJAG_02209":null,"SJAG_02238":null,"SJAG_02393":null,"SJAG_02691":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_04353":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140110","GO:0003674"],"is_obsolete":false,"name":"transcription elongation factor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"transcription elongation regulator activity","type":"related"},{"name":"transcriptional elongation regulator activity","type":"related"}],"termid":"GO:0003711","terms_by_termid":{"GO:0003711":null}}


id: PBO:0044857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene 2","termid":"PBO:0044857"}


id: GO:1990923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of at least EXD1, TDRD12 and some PIWI protein. The complex is required for MILI slicing-triggered biogenesis and loading of MIWI2 piRNAs.","definition_xrefs":["PMID:26669262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PET complex","termid":"GO:1990923"}


id: PATO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organization quality","termid":"PATO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorganized","termid":"PATO:0000937"}


id: PBO:0057296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513a-1","termid":"PBO:0057296"}


id: GO:0075528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus effects a change in the host immune response.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virus-mediated perturbation of host defense response","termid":"GO:0019049"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation by virus of host immune response","synonyms":[{"name":"regulation by virus of host immune system process","type":"exact"}],"termid":"GO:0075528"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: PBO:0065392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 1","termid":"PBO:0065392"}


id: SO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The in-frame interval between the stop codons of a reading frame which when read as sequential triplets, has the potential of encoding a sequential string of amino acids. TER(NNN)nTER.","definition_xrefs":["SGD:rb","SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF","synonyms":[{"name":"open reading frame","type":"exact"}],"termid":"SO:0000236"}


id: GO:0043894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the acetylation of residue Lys609 of the enzyme acetyl-CoA synthetase, using acetyl-CoA as substrate.","definition_xrefs":["PMID:15236963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetyl-CoA synthetase acetyltransferase activity","synonyms":[{"name":"Pat","type":"related"},{"name":"Pat enzyme","type":"exact"},{"name":"protein acetyltransferase activity","type":"broad"}],"termid":"GO:0043894"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: PBO:0065480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 1","termid":"PBO:0065480"}


id: PBO:0074438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 39","termid":"PBO:0074438"}


id: PBO:0081027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 8","termid":"PBO:0081027"}


id: GO:0071164
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74305],"is_not":false,"summary":null,"term":"GO:0071164"}]},"cv_name":"molecular_function","definition":"Catalysis of two successive methyl transfer reactions from AdoMet to the N-2 atom of guanosine, thereby converting 7-methylguanosine in an RNA cap to 2,2,7 trimethylguanosine.","definition_xrefs":["PMID:11983179","PMID:18775984","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA trimethylguanosine synthase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"cap hypermethylase activity","type":"exact"},{"name":"small nuclear RNA methyltransferase activity","type":"related"},{"name":"snRNA methyltransferase activity","type":"related"}],"termid":"GO:0071164","terms_by_termid":{"GO:0071164":null}}


id: GO:0019746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid biosynthetic process","termid":"GO:0016104"},{"relation_name":"is_a","term_name":"hopanoid metabolic process","termid":"GO:0019744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"hopanoid biosynthetic process","synonyms":[{"name":"hopanoid anabolism","type":"exact"},{"name":"hopanoid biosynthesis","type":"exact"},{"name":"hopanoid formation","type":"exact"},{"name":"hopanoid synthesis","type":"exact"}],"termid":"GO:0019746"}


id: PBO:0056181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor G","termid":"PBO:0056181"}


id: GO:2000044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac cell fate specification.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"regulation of cardiac cell fate specification","termid":"GO:2000043"},{"relation_name":"negatively_regulates","term_name":"cardiac cell fate specification","termid":"GO:0060912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac cell fate specification","termid":"GO:2000044"}


id: PBO:0005047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug46","termid":"PBO:0005047"}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: PBO:0044410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 1, pseudogene","termid":"PBO:0044410"}


id: GO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene metabolic process","synonyms":[{"name":"xylene metabolism","type":"exact"}],"termid":"GO:0018948"}


id: PBO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_monopolar_protein_localization_to_cell_tip","termid":"PBO:0034668"}


id: PBO:0081267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B","termid":"PBO:0081267"}


id: PBO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 8","termid":"PBO:0052160"}


id: PBO:0081950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 3","termid":"PBO:0081950"}


id: PBO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2 pseudogene 1","termid":"PBO:0044279"}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["UniProtKB:P40847","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0077733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS1 antisense RNA 1","termid":"PBO:0077733"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: PBO:0028499
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosome_binding","termid":"PBO:0028499"}


id: PBO:0079860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-119 lipid binding chaperone","termid":"PBO:0079860"}


id: PBO:0071926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 3","termid":"PBO:0071926"}


id: GO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, alpha-beta regulatory T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD8-positive, alpha-beta T cell differentiation","termid":"GO:0043374"},{"relation_name":"is_a","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"CD8-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"CD8-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"CD8-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002307"}


id: PBO:0046833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 6","termid":"PBO:0046833"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: GO:1990842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis in the embryo or fetus during pregnancy.","definition_xrefs":["PMID:22738222"],"gene_count":0,"genotype_count":0,"name":"obsolete response to prenatal stress (obsolete GO:1990842)","synonyms":[{"name":"response to PNS","type":"exact"}],"termid":"GO:1990842"}


id: PBO:0077834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 2","termid":"PBO:0077834"}


id: PR:Q10296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.02","synonyms":[{"name":"Spom972h-SPAC22H10.02","type":"exact"}],"termid":"PR:Q10296"}


id: RO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"mutualistically_interacts_with","termid":"RO:0002442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pollinated_by","termid":"RO:0002456"}


id: FYPO:0002155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: PBO:0011147
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologue of Parp Zn finger","termid":"PBO:0011147"}


id: GO:0034873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thioacetamide + O2 + 2 H+ + 2 e- = thioacetamide S-oxide + H2O.","definition_xrefs":["UM-BBD_reactionID:r1312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thioacetamide S-oxygenase activity","termid":"GO:0034873"}


id: GO:1901093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein homooligomerization","termid":"GO:0032462"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of protein homotetramerization","synonyms":[{"name":"regulation of protein homotetramer assembly","type":"exact"},{"name":"regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901093"}


id: PBO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Prr1","termid":"PBO:0002167"}


id: SO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of transcribed_cluster defined by a set of transcribed sequences from the a unique gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_cluster","termid":"SO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unigene_cluster","synonyms":[{"name":"unigene cluster","type":"related"}],"termid":"SO:0001458"}


id: GO:0090678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell dedifferentiation process that is a part of a reversible switch of a cell from one cell type or form to another, at a frequency above the expected frequency for somatic mutations.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell dedifferentiation","termid":"GO:0043697"},{"relation_name":"part_of","term_name":"reversible differentiation","termid":"GO:0090677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell dedifferentiation involved in phenotypic switching","termid":"GO:0090678"}


id: PBO:0072994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCML2 pseudogene 1","termid":"PBO:0072994"}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:dph","GOC:krc","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: GO:0051303
data:
  {"annotated_genes":["SJAG_03327","SJAG_04623","SJAG_03437","SJAG_03540","SJAG_02451","SJAG_00082","SJAG_02624","SJAG_05319","SJAG_04140","SJAG_03048","SJAG_02286","SJAG_01805","SJAG_02336","SJAG_05290","SJAG_03680","SJAG_01297","SJAG_01538","SJAG_01371","SJAG_05226","SJAG_01082","SJAG_00768","SJAG_03926","SJAG_05260","SJAG_05266","SJAG_04745","SJAG_02731","SJAG_00302","SJAG_05220","SJAG_02814","SJAG_05196","SJAG_03989","SJAG_03092","SJAG_03217","SJAG_01263","SJAG_01613","SJAG_04412","SJAG_03220","SJAG_04884","SJAG_00918","SJAG_00930","SJAG_00335","SJAG_01837","SJAG_00646","SJAG_00756","SJAG_03698","SJAG_03683","SJAG_00678","SJAG_04508","SJAG_00418","SJAG_05295","SJAG_03287","SJAG_01601","SJAG_04280","SJAG_01224","SJAG_04076","SJAG_02737","SJAG_02761","SJAG_02346","SJAG_00207","SJAG_01370","SJAG_02045","SJAG_00794","SJAG_01278","SJAG_04040","SJAG_01777","SJAG_01775","SJAG_04259","SJAG_01211","SJAG_03685","SJAG_07002","SJAG_03543","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83658,89453],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[113219,100867,91143,105645,105603,83786,85762,83549,93455,111681,75164,113722,95872,72082,86677,87046,72678,106941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[94153,109007,110697,112192,85998,96817],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[103592],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[85485,101339],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[85486,95412,98264,100494,83196],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[92285,112798,112666,111105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[109210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[90371,105214],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[99332,103596,94749,89809,94155],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990942"},{"annotations":[103597,94157,98969,85468,99333,109009,112053,89455,102861,96002,97892,89810,107855,85102,113752,94654,105198,86665,104213,107854,107856,84887,108459,109310,109708],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[97820],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[107215,100568,111171],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[85720,111826,97839,106465,89429],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[111829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[104470],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[86667,91144,100870,108460,97893,105200,105646,89434,96821,85470,104471,104215,96004,90898,94161,103183,84889,109312,93456,111087,112055,109012,105606,102863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[112084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"}]},"cv_name":"biological_process","definition":"The directed movement of a chromosome to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome localization","termid":"GO:0050000"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03126":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03287":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of chromosome localization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"chromosome positioning","type":"exact"},{"name":"establishment of chromosome localisation","type":"exact"}],"termid":"GO:0051303","terms_by_termid":{"GO:0031134":null,"GO:0031619":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0051315":null,"GO:0051455":null,"GO:0051456":null,"GO:0070197":null,"GO:0099606":null,"GO:0099607":null,"GO:0140405":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0049851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hdc homolog, cell cycle regulator","termid":"PBO:0049851"}


id: PR:O74915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.04 gene.","definition_xrefs":["UniProtKB:O74915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C757.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.04","synonyms":[{"name":"Spom972h-SPCC757.04","type":"exact"}],"termid":"PR:O74915"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: PBO:0053458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 411","termid":"PBO:0053458"}


id: PBO:0088059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase (E3); controls septin dynamics and spindle position checkpoint (SPOC) with ligase Dma1p by regulating recruitment of Elm1p to bud neck; regulates levels of eIF2 subunit Gcd11p, as well as abundance, localization, and ubiquitination of Cdk inhibitory kinase Swe1p; ortholog of human RNF8, similar to human Chfr; contains FHA and RING finger domains; DMA2 has a paralog, DMA1, that arose from the whole genome duplication","termid":"PBO:0088059"}


id: GO:1902721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prolactin secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16159377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"prolactin secretion","termid":"GO:0070459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of prolactin secretion","synonyms":[{"name":"down regulation of prolactin secretion","type":"exact"},{"name":"down-regulation of prolactin secretion","type":"exact"},{"name":"downregulation of prolactin secretion","type":"exact"},{"name":"inhibition of prolactin secretion","type":"narrow"}],"termid":"GO:1902721"}


id: FYPO:0008030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a blue light photoreceptor activity is abnormal.","definition_xrefs":["PMID:23873862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal blue light photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"defective blue light photoreceptor activity","type":"exact"}],"termid":"FYPO:0008030"}


id: PBO:0088855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD-finger protein Cph2","termid":"PBO:0088855"}


id: PBO:0073967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 16","termid":"PBO:0073967"}


id: PBO:0063425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 4D","termid":"PBO:0063425"}


id: PBO:0063862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 1","termid":"PBO:0063862"}


id: GO:0018778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trichloroacetate + 2 H2O = 3 H+ + 3 Cl- + oxalate.","definition_xrefs":["UM-BBD_reactionID:r0382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DL-2 haloacid dehalogenase activity","secondary_identifiers":["EC:3.8.1.10","MetaCyc:RXN-9150"],"termid":"GO:0018778"}


id: GO:0005674
data:
  {"annotated_genes":["SJAG_04852","SJAG_00095","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70218,78899,110172],"is_not":false,"summary":null,"term":"GO:0005674"}]},"cv_name":"cellular_component","definition":"A general transcription initiation factor which in humans consists of a heterodimer of an alpha and a beta subunit. Helps recruit RNA polymerase II to the initiation complex and promotes translation elongation.","definition_xrefs":["PMID:7597077","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00735":null,"SJAG_04852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005654"],"is_obsolete":false,"name":"transcription factor TFIIF complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005674","terms_by_termid":{"GO:0005674":null}}


id: PBO:0048953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 4","termid":"PBO:0048953"}


id: GO:0071293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tellurium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tellurium ion","termid":"GO:0046690"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tellurium ion","synonyms":[{"name":"cellular response to tellurium","type":"exact"}],"termid":"GO:0071293"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: GO:0103118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamine(1-) + an (3R)-3-hydroxymyristoyl-[acp] = UDP-2,3-bis[O-(3R)-3-hydroxymyristoyl]-alpha-D-glucosamine + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz","EC:2.3.1.191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase activity","secondary_identifiers":["RHEA:17817","GO:0043764","MetaCyc:UDPHYDROXYMYRGLUCOSAMNACETYLTRANS-RXN"],"synonyms":[{"name":"UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase activity","type":"related"}],"termid":"GO:0103118"}


id: PR:Q9C112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27F1.10 gene.","definition_xrefs":["UniProtKB:Q9C112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C27F1.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.10","synonyms":[{"name":"Spom972h-SPAC27F1.10","type":"exact"}],"termid":"PR:Q9C112"}


id: PBO:0073424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SF1 divergent transcript","termid":"PBO:0073424"}


id: PBO:0075930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 22","termid":"PBO:0075930"}


id: PBO:0055871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 antisense RNA 1","termid":"PBO:0055871"}


id: GO:1900491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:mengo_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900491"}


id: GO:0046251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene metabolic process","termid":"GO:0018923"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"limonene catabolic process","synonyms":[{"name":"limonene breakdown","type":"exact"},{"name":"limonene catabolism","type":"exact"},{"name":"limonene degradation","type":"exact"}],"termid":"GO:0046251"}


id: GO:2000070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to water deprivation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to water deprivation","synonyms":[{"name":"regulation of drought tolerance","type":"related"},{"name":"regulation of response to dehydration","type":"exact"},{"name":"regulation of response to drought","type":"exact"},{"name":"regulation of response to thirst","type":"exact"}],"termid":"GO:2000070"}


id: PBO:0064227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 1","termid":"PBO:0064227"}


id: PBO:0088697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85a","termid":"PBO:0088697"}


id: PomGeneEx:0000015
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA absent","synonyms":[{"name":"RNA expression absent","type":"exact"}],"termid":"PomGeneEx:0000015"}


id: PBO:0011064
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi","termid":"PBO:0011064"}


id: GO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cytoskeleton of other organism involved in symbiotic interaction (obsolete GO:0052334)","synonyms":[{"name":"modification by organism of cytoskeleton of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052334"}


id: PBO:0080277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 40 pseudogene","termid":"PBO:0080277"}


id: GO:1905299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal epithelial cell development.","definition_xrefs":["GOC:TermGenie","PMID:23904268","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial cell development","termid":"GO:1905298"},{"relation_name":"negatively_regulates","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal epithelial cell development","synonyms":[{"name":"down regulation of intestinal epithelial cell development","type":"exact"},{"name":"down-regulation of intestinal epithelial cell development","type":"exact"},{"name":"downregulation of intestinal epithelial cell development","type":"exact"},{"name":"inhibition of intestinal epithelial cell development","type":"narrow"}],"termid":"GO:1905299"}


id: GO:0022019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of dorsal lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"},{"relation_name":"part_of","term_name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal lateral ganglionic eminence cell proliferation","termid":"GO:0022019"}


id: GO:0031734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR9 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR9 chemokine receptor binding","synonyms":[{"name":"CCR9 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031734"}


id: GO:0097051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the endoplasmic reticulum membrane.","definition_xrefs":["GOC:rb","PMID:9388185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to endoplasmic reticulum","termid":"GO:0072599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"establishment of protein localisation in endoplasmic reticulum membrane","type":"exact"},{"name":"establishment of protein localization in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0097051"}


id: PBO:0039126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis inducing factor mitochondria associated 3","termid":"PBO:0039126"}


id: PBO:0066992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 295","termid":"PBO:0066992"}


id: PBO:0040668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brevican","termid":"PBO:0040668"}


id: PBO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc6 (predicted)","termid":"PBO:0000845"}


id: PBO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 22","termid":"PBO:0044430"}


id: PBO:0027887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation","termid":"PBO:0027887"}


id: FYPO:0002029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a cell divides asymmetrically, resulting in the formation of daughter cells that are not the same size.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"},{"relation_name":"output_of","term_name":"abnormal actomyosin contractile ring localization","termid":"FYPO:0000033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell division, large and small daughter cells","synonyms":[{"name":"abnormal cell division, large and small daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal cell division, large and small daughter cells during vegetative growth","type":"exact"}],"termid":"FYPO:0002029"}


id: GO:0030124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An AP-type membrane coat adaptor complex that consists of beta4, epsilon, mu4 and sigma4 subunits and is found associated with membranes in the trans-Golgi network; it is not clear whether AP-4 forms clathrin coats in vivo.","definition_xrefs":["PMID:10611976","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-type membrane coat adaptor complex","termid":"GO:0030119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"AP-4 adaptor complex","termid":"GO:0030124"}


id: GO:0035373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chondroitin sulfate proteoglycan, any proteoglycan containing chondroitin sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan binding","termid":"GO:0035373"}


id: GO:0032993
data:
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id: FYPO:0002942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell is in G0 phase. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"swollen spheroid cell during G0","synonyms":[{"name":"enlarged spheroid cell during G0","type":"related"},{"name":"enlarged volume spheroid cell during G0","type":"exact"},{"name":"large spheroid cell during G0","type":"related"},{"name":"spheroid cell with increased cell size during G0","type":"related"},{"name":"spheroid cell with increased cell volume during G0","type":"exact"},{"name":"swollen rounded cell during G0","type":"exact"},{"name":"swollen spheroid cell during cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence","type":"exact"}],"termid":"FYPO:0002942"}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: PBO:0079079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-7","termid":"PBO:0079079"}


id: PBO:0072423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 28","termid":"PBO:0072423"}


id: PBO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B","termid":"PBO:0046203"}


id: GO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a macromolecule that is destined to form part of a specific cellular component.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component macromolecule biosynthetic process (obsolete GO:0070589)","synonyms":[{"name":"cellular component macromolecule biosynthesis","type":"exact"}],"termid":"GO:0070589"}


id: GO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0815316208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole","synonyms":[{"name":"vacuole, cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000325"}


id: PBO:0061153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 5","termid":"PBO:0061153"}


id: PBO:0063973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 7","termid":"PBO:0063973"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: GO:1990672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a medial-Golgi-derived vesicle to the lipid bilayer membrane around the Golgi trans cisterna. Vesicles are involved in anterograde transport.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle fusion to target membrane","termid":"GO:0048210"},{"relation_name":"is_a","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"},{"relation_name":"part_of","term_name":"inter-Golgi cisterna vesicle-mediated transport","termid":"GO:0048219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"medial-Golgi-derived vesicle fusion with Golgi trans cisterna membrane","termid":"GO:1990672"}


id: FYPO:0009095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is increased relative to normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on fructose carbon source","synonyms":[{"name":"increased growth on fructose carbon source","type":"broad"},{"name":"increased vegetative cell growth on fructose carbon source","type":"exact"}],"termid":"FYPO:0009095"}


id: PBO:0030196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0030196"}


id: PBO:0040217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3B","termid":"PBO:0040217"}


id: PBO:0012590
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human NF1","termid":"PBO:0012590"}


id: GO:0006161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyguanosine, a nucleoside consisting of the base guanine and the sugar deoxyribose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyguanosine metabolic process","termid":"GO:0042453"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyguanosine catabolic process","synonyms":[{"name":"deoxyguanosine breakdown","type":"exact"},{"name":"deoxyguanosine catabolism","type":"exact"},{"name":"deoxyguanosine degradation","type":"exact"}],"termid":"GO:0006161"}


id: GO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prosthetic group metabolic process (obsolete GO:0051200)","synonyms":[{"name":"activation of prosthetic group metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of prosthetic group metabolism","type":"exact"},{"name":"stimulation of prosthetic group metabolic process","type":"narrow"},{"name":"up regulation of prosthetic group metabolic process","type":"exact"},{"name":"up-regulation of prosthetic group metabolic process","type":"exact"},{"name":"upregulation of prosthetic group metabolic process","type":"exact"}],"termid":"GO:0051200"}


id: PBO:0047011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A14","termid":"PBO:0047011"}


id: GO:1990611
data:
  {"annotated_genes":["SJAG_04873","SJAG_00786","SJAG_00690","SJAG_02592","SJAG_00169","SJAG_03869","SJAG_04383","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90808,99395],"is_not":false,"summary":null,"term":"GO:1990611"},{"annotations":[110770,89977,72404,70256,94849,88447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of cytoplasmic translational initiation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16278445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation in response to stress","termid":"GO:1990497"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1990611","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0075471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 21","termid":"PBO:0075471"}


id: GO:0035454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid inner membrane consisting of gene products and protein complexes that are loosely bound to its stromal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of lumenal side of plastid thylakoid membrane","termid":"GO:0035450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of stromal side of plastid inner membrane","synonyms":[{"name":"extrinsic to stromal leaflet of plastid inner membrane","type":"exact"},{"name":"extrinsic to stromal side of plastid inner membrane","type":"narrow"},{"name":"peripheral to stromal side of plastid inner membrane","type":"exact"}],"termid":"GO:0035454"}


id: PBO:0063442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6D","termid":"PBO:0063442"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: PBO:0045835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 25","termid":"PBO:0045835"}


id: GO:0019177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.","definition_xrefs":["RHEA:25302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dihydroneopterin triphosphate pyrophosphohydrolase activity","secondary_identifiers":["EC:3.6.1.67","MetaCyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN"],"termid":"GO:0019177"}


id: PBO:0066100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras related dexamethasone induced 1","termid":"PBO:0066100"}


id: PBO:0056432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 5","termid":"PBO:0056432"}


id: PBO:0086581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is fluconazole resistant and has long chronological lifespan","termid":"PBO:0086581"}


id: GO:0035264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of an entire multicellular organism, as opposed to cell growth.","definition_xrefs":["GOC:tb","GOC:bf","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism growth","synonyms":[{"name":"body growth","type":"related"}],"termid":"GO:0035264"}


id: GO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose.","definition_xrefs":["EC:2.4.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"lactose synthase activity","secondary_identifiers":["MetaCyc:LACTOSE-SYNTHASE-RXN","Reactome:R-HSA-5653878","RHEA:12404"],"synonyms":[{"name":"UDP-galactose-glucose galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:D-glucose 4-beta-D-galactotransferase activity","type":"related"},{"name":"UDPgalactose-glucose galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-glucose 4-beta-D-galactotransferase activity","type":"related"},{"name":"lactose synthetase activity","type":"related"},{"name":"uridine diphosphogalactose-glucose galactosyltransferase activity","type":"related"}],"termid":"GO:0004461"}


id: GO:1990862
data:
  {"annotated_genes":["SJAG_05226","SJAG_01263"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75334,112665],"is_not":false,"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"A protein complex that resides in the inner nuclear membrane and anchors telomeres to the nuclear envelope. In fission yeast, it is composed of Bqt3 and Bqt4.","definition_xrefs":["PMID:19948484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear inner membrane","termid":"GO:0005637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear membrane complex Bqt3-Bqt4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1990862","terms_by_termid":{"GO:1990862":null}}


id: PBO:0081551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF470 divergent transcript","termid":"PBO:0081551"}


id: PBO:0034248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_orthology_relationship_with","termid":"PBO:0034248"}


id: PBO:0040250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 5","termid":"PBO:0040250"}


id: GO:0032923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Synthesis of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic phosphonate biosynthetic process","synonyms":[{"name":"organophosphonate biosynthetic process","type":"related"}],"termid":"GO:0032923"}


id: PBO:0030695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione-disulfide_reductase_activity","termid":"PBO:0030695"}


id: FYPO:0003463
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which alpha,alpha-trehalase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal alpha,alpha-trehalase activity","termid":"FYPO:0001479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished alpha,alpha-trehalase activity","synonyms":[{"name":"abolished neutral trehalase activity","type":"exact"},{"name":"abolished trehalase activity","type":"broad"},{"name":"alpha,alpha-trehalase activity abolished","type":"exact"}],"termid":"FYPO:0003463"}


id: PBO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 118","termid":"PBO:0071116"}


id: PBO:0012029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin superfamily member, human ER membrane protein complex subunit 7 ortholog","termid":"PBO:0012029"}


id: PBO:0059801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 27","termid":"PBO:0059801"}


id: SO:0001518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that includes the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentric","termid":"SO:0001518"}


id: GO:1990731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that results in the endonucleolytic cleavage of the damaged strand of DNA immediately 5' of a UV-induced damage site, and is the first part of a DNA repair process that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PMID:10704216"],"gene_count":0,"genotype_count":0,"name":"obsolete UV-damage excision repair, DNA incision (obsolete GO:1990731)","synonyms":[{"name":"DNA incision involved in AER","type":"related"},{"name":"DNA incision involved in UV-damage excision repair","type":"exact"},{"name":"DNA incision involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA incision involved in UVER","type":"exact"},{"name":"DNA incision involved in alternative excision repair","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair, DNA incision","type":"exact"},{"name":"UVDE-dependent excision repair, DNA incision","type":"exact"},{"name":"alternative excision repair, DNA incision","type":"related"},{"name":"nucleic acid cleavage involved in UV-damage excision repair","type":"exact"}],"termid":"GO:1990731"}


id: PBO:0066071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 1","termid":"PBO:0066071"}


id: FYPO:0001147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is normal (i.e. the same as in wild-type cells).","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal mating efficiency","termid":"FYPO:0001147"}


id: GO:0007080
data:
  {"annotated_genes":["SJAG_00930","SJAG_00678","SJAG_04040","SJAG_00646","SJAG_01278","SJAG_02761","SJAG_01613","SJAG_01775","SJAG_00082","SJAG_01837","SJAG_03327","SJAG_03989","SJAG_01224","SJAG_01371","SJAG_02045","SJAG_04076","SJAG_05319","SJAG_05220","SJAG_00918","SJAG_04259","SJAG_00794","SJAG_00207","SJAG_01805","SJAG_03217","SJAG_05266","SJAG_00768","SJAG_02286","SJAG_02336","SJAG_02451","SJAG_02346","SJAG_04412","SJAG_01370","SJAG_01297","SJAG_01082","SJAG_02624","SJAG_04745","SJAG_02731","SJAG_03437","SJAG_01211","SJAG_00335","SJAG_03543","SJAG_03220","SJAG_04140","SJAG_00418","SJAG_03048","SJAG_04623","SJAG_03540","SJAG_00302","SJAG_01601","SJAG_04884"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105645,85762,100867,113722,72678,105603,83549,113219,83786,75164,106941,86677,72082,87046,95872,91143,111681,93455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[103592],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[105214,90371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[99332,89809,94155,103596,94749],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[86665,85102,94654,107856,104213,97892,89810,99333,105198,109708,112053,96002,103597,109310,85468,113752,84887,94157,108459,98969,102861,89455,107854,107855,109009],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[97839,85720,106465,111826,89429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during mitotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0007080","terms_by_termid":{"GO:0051315":null,"GO:0099606":null,"GO:0099607":null,"GO:0140429":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0062497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 1","termid":"PBO:0062497"}


id: PBO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 3","termid":"PBO:0060849"}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: PBO:0049068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR84, ZNF385A, ITGA5 and GTSF1 antisense RNA 1","termid":"PBO:0049068"}


id: GO:0023024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class I protein complex binding","termid":"GO:0023024"}


id: PBO:0003472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, ribosome associated molecular chaperone Sks2","termid":"PBO:0003472"}


id: MOD:00348
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carbamoyl-L-alanine.","definition_xrefs":["PubMed:12203680","RESID:AA0343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-aminocarbamoylated residue","termid":"MOD:01679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carbamoyl-L-alanine","synonyms":[{"name":"(S)-2-(carbamoylamino)propanoic acid","type":"exact"},{"name":"2-ureidopropanoic acid","type":"exact"},{"name":"MOD_RES N-carbamoylalanine","type":"exact"},{"name":"N-carbamoyl-L-alanine","type":"exact"},{"name":"N-carbamylalanine","type":"exact"},{"name":"N2CbmAla","type":"exact"}],"termid":"MOD:00348"}


id: PBO:0036526
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","termid":"PBO:0036526"}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: GO:0019731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibacterial humoral response","secondary_identifiers":["GO:0019733","GO:0006961"],"termid":"GO:0019731"}


id: SO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_methyl_3_3_amino_3_carboxypropyl_pseudouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methyl_three_three_amino_three_carboxypropyl_pseudouridine","secondary_identifiers":["RNAMOD:086"],"synonyms":[{"name":"1-methyl-3-(3-amino-3-carboxypropyl) pseudouridine","type":"exact"},{"name":"m1acp3Y","type":"exact"}],"termid":"SO:0001373"}


id: PBO:0081977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 4","termid":"PBO:0081977"}


id: PBO:0066708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 5","termid":"PBO:0066708"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: GO:0050350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + 3,4',5-trihydroxy-stilbene + 4 CO2.","definition_xrefs":["EC:2.3.1.95","MetaCyc:TRIHYDROXYSTILBENE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"trihydroxystilbene synthase activity","secondary_identifiers":["MetaCyc:RXN-87","RHEA:11936"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"},{"name":"resveratrol synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050350"}


id: GO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of M phase of mitosis and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic prophase","termid":"GO:0000088"}


id: GO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051803)","synonyms":[{"name":"down regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of cytolysis of cells in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"negative regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051803"}


id: GO:1900965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methanophenazine metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of nitrogen compound metabolic process","termid":"GO:0051171"},{"relation_name":"regulates","term_name":"methanophenazine metabolic process","termid":"GO:1900629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of methanophenazine metabolic process","synonyms":[{"name":"regulation of methanophenazine metabolism","type":"exact"}],"termid":"GO:1900965"}


id: FYPO:0006953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular asparagine level","synonyms":[{"name":"increased asparagine accumulation","type":"related"},{"name":"increased cellular L-asparagine level","type":"exact"},{"name":"increased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"increased cellular asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006953"}


id: GO:0043262
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109186],"is_not":false,"summary":null,"term":"GO:0043262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = AMP + phosphate + H+.","definition_xrefs":["PMID:1470606","RHEA:61436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ADP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-10862"],"synonyms":[{"name":"ADP diphosphatase activity","type":"broad"},{"name":"ADPase","type":"broad"},{"name":"ADPase activity","type":"related"},{"name":"ATP diphosphohydrolase activity","type":"related"},{"name":"ATP-diphosphatase activity","type":"related"},{"name":"adenosine diphosphatase activity","type":"related"},{"name":"adenosine-diphosphatase activity","type":"exact"}],"termid":"GO:0043262","terms_by_termid":{"GO:0043262":null}}


id: PBO:0075808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 1","termid":"PBO:0075808"}


id: PBO:0056568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 3","termid":"PBO:0056568"}


id: PBO:0077920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 11","termid":"PBO:0077920"}


id: GO:0075031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont germ tube hook structure formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of formation of symbiont germ tube hook structure for appressorium development","termid":"GO:0075030"},{"relation_name":"positively_regulates","term_name":"formation of appressorium germ tube hook structure","termid":"GO:0075029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of symbiont germ tube hook structure for appressorium development","synonyms":[{"name":"positive regulation of formation of symbiont germ tube hook structure on or near host","type":"exact"},{"name":"positive regulation of germ tube tip of symbiont on or near the exterior of host","type":"exact"},{"name":"positive regulation of symbiont germ tube hook structure formation on or near host","type":"related"}],"termid":"GO:0075031"}


id: PBO:0058372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4744","termid":"PBO:0058372"}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: GO:1990224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-nicotinamide D-ribonucleotide (NMN-) + H2O = beta-nicotinamide D-riboside (nicotinamide ribose, NmR) + phosphate.","definition_xrefs":["RHEA:30815","GOC:rb","PMID:21349851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"NMN phosphatase activity","synonyms":[{"name":"beta-nicotinamide D-ribonucleotide phosphatase activity","type":"exact"},{"name":"nicotinamide mononucleotide phosphatase activity","type":"exact"}],"termid":"GO:1990224"}


id: PBO:0042526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 3","termid":"PBO:0042526"}


id: GO:0004418
data:
  {"annotated_genes":["SJAG_02896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75485],"is_not":false,"summary":null,"term":"GO:0004418"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 4 porphobilinogen = hydroxymethylbilane + 4 NH4.","definition_xrefs":["EC:2.5.1.61","RHEA:13185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016765"],"is_obsolete":false,"name":"hydroxymethylbilane synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R00084","Reactome:R-HSA-189406","MetaCyc:OHMETHYLBILANESYN-RXN"],"synonyms":[{"name":"(4-(2-carboxyethyl)-3-(carboxymethyl)pyrrol-2-yl)methyltransferase (hydrolyzing) activity","type":"related"},{"name":"(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"HMB-synthase activity","type":"related"},{"name":"porphobilinogen ammonia-lyase (polymerizing)","type":"related"},{"name":"porphobilinogen deaminase activity","type":"related"},{"name":"porphobilinogen:(4-[2-carboxyethyl]-3-[carboxymethyl]pyrrol-2-yl)methyltransferase (hydrolysing)","type":"related"},{"name":"pre-uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen I synthase activity","type":"narrow"},{"name":"uroporphyrinogen I synthetase activity","type":"narrow"},{"name":"uroporphyrinogen synthase activity","type":"related"},{"name":"uroporphyrinogen synthetase activity","type":"related"}],"termid":"GO:0004418","terms_by_termid":{"GO:0004418":null}}


id: PBO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Abc3, unknown specificity","termid":"PBO:0003039"}


id: PBO:0069313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 571, pseudogene","termid":"PBO:0069313"}


id: PR:Q10343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-AMP-activated protein kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.08c","secondary_identifiers":["UniProtKB:Q10343"],"synonyms":[{"name":"AMPK gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AMPK subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRKAG1","type":"exact"}],"termid":"PR:Q10343"}


id: PBO:0065913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L intronic transcript 1","termid":"PBO:0065913"}


id: PBO:0087920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor TFIIB; a general transcription factor required for transcription initiation and start site selection by RNA polymerase II","termid":"PBO:0087920"}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: MOD:00659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to a methylated glutamine, either 2-methylated glutamine, N5-methylated glutamine, or methyl esterified deamidated glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated glutamine","synonyms":[{"name":"MeGln","type":"exact"}],"termid":"MOD:00659"}


id: PBO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulette","termid":"PBO:0060814"}


id: PBO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin II heavy chain Myo3","termid":"PBO:0001606"}


id: GO:0043676
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The layer of sexine which forms a roof over the columella, granules or other infratectal elements.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sexine","termid":"GO:0043673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tectum","synonyms":[{"name":"sexine 2","type":"exact"}],"termid":"GO:0043676"}


id: PBO:0044977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 29","termid":"PBO:0044977"}


id: GO:0070855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin VI heavy chain.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin VI heavy chain binding","termid":"GO:0070854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin VI head/neck binding","termid":"GO:0070855"}


id: _global:reciprocal_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_of","termid":"_global:reciprocal_of"}


id: PBO:0059968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 13","termid":"PBO:0059968"}


id: FYPO:0001603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal level of substance in vacuole","synonyms":[{"name":"normal level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"normal level of substance in vacuole during vegetative growth","type":"exact"},{"name":"normal vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001603"}


id: GO:0051945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"negatively_regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"down regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"negative regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"negative regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051945"}


id: GO:0043456
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75448],"is_not":false,"summary":null,"term":"GO:0043456"},{"annotations":[85420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the pentose-phosphate shunt, the process in which glucose is oxidized, coupled to NADPH synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of NADP metabolic process","termid":"GO:1902031"},{"relation_name":"regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091","GO:0055086"],"is_obsolete":false,"name":"regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of pentose phosphate pathway","type":"exact"},{"name":"regulation of pentose phosphate shunt","type":"exact"},{"name":"regulation of pentose-phosphate pathway","type":"exact"}],"termid":"GO:0043456","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


