# terms

id: GO:0009148
data:
  {"annotated_genes":["SJAG_04627","SJAG_00533","SJAG_00412","SJAG_00885","SJAG_02887","SJAG_03708","SJAG_04657","SJAG_04665","SJAG_00964","SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[95566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[110108,88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[70964,88071,85118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[102623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[95568,71834,71336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside triphosphate metabolic process","termid":"GO:0009147"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00412":null,"SJAG_00533":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyrimidine nucleoside triphosphate anabolism","type":"exact"},{"name":"pyrimidine nucleoside triphosphate biosynthesis","type":"exact"},{"name":"pyrimidine nucleoside triphosphate formation","type":"exact"},{"name":"pyrimidine nucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009148","terms_by_termid":{"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009212":null,"GO:0044210":null,"GO:0044211":null}}


id: GO:0140679
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107590],"is_not":false,"summary":null,"term":"GO:0140679"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na(in) = ADP + phosphate + Na(out).","definition_xrefs":["PMID:9106203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type sodium transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14633","TC:3.A.1.115.1","EC:7.2.2.4"],"termid":"GO:0140679","terms_by_termid":{"GO:0140679":null}}


id: GO:0030056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-substrate junction (attachment structure) found in epithelial cells that links intermediate filaments to extracellular matrices via transmembrane complexes. In vertebrates, hemidesmosomes mediate contact between the basal side of epithelial cells and the basal lamina. In C. elegans, hemidesmosomes connect epithelial cells to distinct extracellular matrices on both the apical and basal cell surfaces.","definition_xrefs":["GOC:kmv","ISBN:0815316208","PMID:20205195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction","termid":"GO:0030055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hemidesmosome","secondary_identifiers":["Wikipedia:Hemidesmosome"],"synonyms":[{"name":"epidermal attachment structure","type":"narrow"},{"name":"fibrous organelle","type":"narrow"},{"name":"hemi-adherens junction","type":"related"},{"name":"trans-epithelial attachment","type":"narrow"}],"termid":"GO:0030056"}


id: PBO:0041326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 78","termid":"PBO:0041326"}


id: FYPO:0005909
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an RNA molecule is abnormal during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PomBase:mah","PMID:23066505","GO:0031123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abnormal RNA 3'-end processing during cellular response to ER stress","type":"exact"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 3'-end processing during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005909"}


id: GO:0007469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the antenna over time, from its formation to the mature structure. The antenna are the sensory structures on the head that are capable of detecting various environmental stimuli.","direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antennal development","termid":"GO:0007469"}


id: PBO:0079584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 C pseudogene 5","termid":"PBO:0079584"}


id: GO:2000516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"positively_regulates","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}


id: PBO:0026980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane","termid":"PBO:0026980"}


id: GO:0075201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a threadlike, tubular structure, which may contain multiple nuclei and may or may not be divided internally by septa or cross-walls, for the purpose of penetration into its host organism. In the case of an appressorium existing, this term is defined in further details as the process in which the symbiont penetration peg expands to form a hypha which traverses the epidermal cell and emerges into the intercellular space of the mesophyll tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","PMID:26441323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration hypha formation","synonyms":[{"name":"formation of symbiont penetration hypha for entry into host","type":"related"},{"name":"symbiont penetration hypha formation for entry into host","type":"related"}],"termid":"GO:0075201"}


id: PBO:0079289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTLL7 intronic transcript 1","termid":"PBO:0079289"}


id: GO:0007044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction assembly","termid":"GO:0034329"},{"relation_name":"is_a","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cell-substrate junction assembly","secondary_identifiers":["GO:0007045"],"synonyms":[{"name":"cell-substrate adherens junction assembly","type":"related"}],"termid":"GO:0007044"}


id: GO:0048721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the clypeus are generated and organized.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"clypeo-labral disc morphogenesis","termid":"GO:0007453"},{"relation_name":"part_of","term_name":"clypeus development","termid":"GO:0048723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus morphogenesis","termid":"GO:0048721"}


id: FYPO:0006341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis does not occur in the equatorial region of the cell during mitosis as in wild-type cells.","definition_xrefs":["PMID:16141239","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished equatorial endocytosis during mitosis","synonyms":[{"name":"abolished endocytosis to cell division site","type":"related"},{"name":"abolished equatorial endocytosis during M phase of mitotic cell cycle","type":"related"},{"name":"abolished equatorial endocytosis during cell division","type":"related"},{"name":"abolished equatorial endocytosis during mitosis during vegetative growth","type":"exact"},{"name":"abolished equatorial endocytosis during mitotic M phase","type":"related"},{"name":"endocytosis restricted to cell end during mitosis","type":"related"},{"name":"equatorial endocytosis abolished during mitosis","type":"exact"}],"termid":"FYPO:0006341"}


id: GO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons into, out of, within or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter activity (obsolete GO:0005489)","synonyms":[{"name":"Rieske iron-sulfur protein","type":"related"},{"name":"class I cytochrome c","type":"related"},{"name":"class II cytochrome c","type":"related"},{"name":"class III cytochrome c","type":"related"},{"name":"class IIa cytochrome c","type":"related"},{"name":"class IIb cytochrome c","type":"related"},{"name":"class IV cytochrome c","type":"related"},{"name":"cytochrome b","type":"related"},{"name":"cytochrome b5","type":"related"},{"name":"cytochrome c3 (tetraheme)","type":"related"},{"name":"cytochrome c554","type":"related"},{"name":"cytochrome c7 (triheme)","type":"related"},{"name":"cytochrome d","type":"related"},{"name":"diheme class I cytochrome c","type":"related"},{"name":"electron transfer carrier","type":"related"},{"name":"electron transporter activity","type":"exact"},{"name":"flavin-containing electron transporter","type":"related"},{"name":"flavodoxin","type":"related"},{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"related"},{"name":"monoheme class I cytochrome c","type":"related"},{"name":"nonaheme cytochrome c","type":"related"},{"name":"respiratory chain cytochrome b6","type":"related"}],"termid":"GO:0005489"}


id: PBO:0079830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream master lncRNA of the inflammatory chemokine locus","termid":"PBO:0079830"}


id: GO:0017189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal alanine of proteins; catalyzed by peptide alpha-N-acetyltransferase or other enzymes of this class, such as ribosomal-protein-alanine N-acetyltransferase.","definition_xrefs":["RESID:AA0041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-alanine modification","termid":"GO:0018194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine acetylation","termid":"GO:0017189"}


id: PBO:0063285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 11","termid":"PBO:0063285"}


id: PBO:0049751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 1","termid":"PBO:0049751"}


id: FYPO:0005208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization during meiotic cell cycle","synonyms":[{"name":"abolished protein localisation during meiotic cell cycle","type":"exact"},{"name":"protein absent from specific location in cell during meiotic cell cycle","type":"related"},{"name":"protein localization abolished during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005208"}


id: GO:0005515
data:
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id: GO:1902779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkane stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:22958739","GO_REF:0000071","PMID:23826995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkane","termid":"GO:1902779"}


id: PBO:0082994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic L-asparaginase, involved in asparagine catabolism; catalyzes hydrolysis of L-asparagine to aspartic acid and ammonia; important enzyme for the treatment of acute lymphoblastic leukemia; has low glutaminase activity and dependence; synthesized constitutively","termid":"PBO:0082994"}


id: GO:0033445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"AGU codon-amino acid adaptor activity","synonyms":[{"name":"AGT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033445"}


id: PBO:0091675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional lncRNA of nc-tgp1, non-functional","termid":"PBO:0091675"}


id: GO:0097366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bronchodilator stimulus. A bronchodilator is a chemical that causes an increase in the expansion of a bronchus or bronchial tubes.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bronchodilator","synonyms":[{"name":"response to bronchodilator agent","type":"exact"},{"name":"response to broncholytic agent","type":"related"}],"termid":"GO:0097366"}


id: GO:0016309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["EC:2.7.1.149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-5-phosphate 4-kinase activity","secondary_identifiers":["RHEA:12280","Reactome:R-HSA-6811522","Reactome:R-HSA-1675776","MetaCyc:2.7.1.149-RXN"],"synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"broad"},{"name":"ATP:1-phosphatidyl-1D-myo-inositol-5-phosphate 4-phosphotransferase activity","type":"related"},{"name":"PIP4K","type":"exact"},{"name":"type II PIP kinase activity","type":"narrow"}],"termid":"GO:0016309"}


id: GO:0010647
data:
  {"annotated_genes":["SJAG_04551","SJAG_01587","SJAG_01805","SJAG_04259","SJAG_03371","SJAG_00457","SJAG_01150","SJAG_00143","SJAG_00027","SJAG_06621","SJAG_06592","SJAG_03903","SJAG_04776","SJAG_03907","SJAG_06622","SJAG_00561","SJAG_02486","SJAG_04496","SJAG_01632","SJAG_05030","SJAG_02605","SJAG_00318","SJAG_00845","SJAG_06588","SJAG_00781","SJAG_03089","SJAG_03625","SJAG_04910","SJAG_02183","SJAG_03048","SJAG_02945","SJAG_03405","SJAG_03568","SJAG_03828","SJAG_02135","SJAG_01978","SJAG_00082","SJAG_00209","SJAG_02231","SJAG_02682","SJAG_03453","SJAG_01837","SJAG_01181","SJAG_03936","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97608,106250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[57143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043410"},{"annotations":[109011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[111823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[90843,104274,104271,104273,104269,104272,104268,107081,107723,113352,104270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[110745,99134,86535,109823,83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[83327,85722,89432,105811,97843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[108659,108658,112123,108657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[72893,100522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[84089,105828,89930,91680,113435,75198,108093,104585,75888,74840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[102365,93296,86863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03625":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0010647","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0043410":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: PBO:0082221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha aminoadipate reductase; catalyzes the reduction of alpha-aminoadipate to alpha-aminoadipate 6-semialdehyde, which is the fifth step in biosynthesis of lysine; activation requires posttranslational phosphopantetheinylation by Lys5p","termid":"PBO:0082221"}


id: GO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.","definition_xrefs":["GOC:mah","PMID:10481174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"telethonin binding","termid":"GO:0031433"}


id: PR:O14048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.15c","secondary_identifiers":["UniProtKB:O14048"],"synonyms":[{"name":"Spom972h-UBXN7","type":"exact"}],"termid":"PR:O14048"}


id: PBO:0108976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 1","termid":"PBO:0108976"}


id: PBO:0064353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 1","termid":"PBO:0064353"}


id: PBO:0056345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP4K3 divergent transcript","termid":"PBO:0056345"}


id: GO:1903460
data:
  {"annotated_genes":["SJAG_02182","SJAG_00729","SJAG_01010","SJAG_02908","SJAG_04877","SJAG_00863","SJAG_00814","SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85305,89583,90823,90855,99658,100326,102354,102709],"is_not":false,"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any leading strand elongation that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:1234","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading strand elongation","termid":"GO:0006272"},{"relation_name":"is_a","term_name":"DNA strand elongation involved in mitotic DNA replication","termid":"GO:1902983"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02908":null,"SJAG_04190":null,"SJAG_04877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication leading strand elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leading strand elongation involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"leading strand elongation involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"leading strand elongation involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"leading strand elongation involved in mitotic DNA replication","type":"exact"},{"name":"leading strand elongation involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"leading strand elongation involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903460","terms_by_termid":{"GO:1903460":null}}


id: PBO:0042252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriole, cilia and spindle associated protein","termid":"PBO:0042252"}


id: GO:0048735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a haltere are generated and organized.","definition_xrefs":["GOC:jid","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"haltere disc morphogenesis","termid":"GO:0007481"},{"relation_name":"part_of","term_name":"haltere development","termid":"GO:0007482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere morphogenesis","termid":"GO:0048735"}


id: PBO:0085198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf19 complex; involved in the establishment of pericentromeric cohesion during mitosis; prevents non-disjunction of sister chromatids during meiosis II; forms a stable complex with Chl4p; required for localization of Sgo1p to pericentric sites during meiosis I; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-L and fission yeast fta1","termid":"PBO:0085198"}


id: GO:0032308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of icosanoid secretion","termid":"GO:0032305"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of prostaglandin secretion","synonyms":[{"name":"activation of prostaglandin secretion","type":"narrow"},{"name":"positive regulation of prostacyclin secretion","type":"narrow"},{"name":"stimulation of prostaglandin secretion","type":"narrow"},{"name":"up regulation of prostaglandin secretion","type":"exact"},{"name":"up-regulation of prostaglandin secretion","type":"exact"},{"name":"upregulation of prostaglandin secretion","type":"exact"}],"termid":"GO:0032308"}


id: PR:O59702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase clr6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.05c","synonyms":[{"name":"Spom972h-clr6","type":"exact"},{"name":"cryptic loci regulator 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59702"}


id: PR:O94281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ckb2 gene.","definition_xrefs":["UniProtKB:O94281","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.02c","synonyms":[{"name":"CK II beta-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ckb2","type":"exact"}],"termid":"PR:O94281"}


id: PBO:0064572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome p450 oxidoreductase","termid":"PBO:0064572"}


id: GO:0051360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP506 chromophore cross-link from the alpha-carboxyl carbon of residue n, an asparagine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0380","PMID:10504696"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-asparagine 5-imidazolinone glycine (obsolete GO:0051360)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-asparagine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051360"}


id: GO:0005697
data:
  {"annotated_genes":["SJAG_01378","SJAG_03070","SJAG_05240","SJAG_05979","SJAG_00939","SJAG_03460","SJAG_03954","SJAG_04586","SJAG_00559","SJAG_01327","SJAG_02469","SJAG_01819"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70059,86333,91404,101725,103382,103466,103867,108113,110127,111026,111563],"is_not":false,"summary":null,"term":"GO:0005697"},{"annotations":[70924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000333"}]},"cv_name":"cellular_component","definition":"Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.","definition_xrefs":["PMID:11884619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00559":null,"SJAG_00939":null,"SJAG_01327":null,"SJAG_01378":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04586":null,"SJAG_05240":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"telomerase holoenzyme complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005697","terms_by_termid":{"GO:0000333":null,"GO:0005697":null}}


id: PBO:0082518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex; complex acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes","termid":"PBO:0082518"}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: GO:0014824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart.","definition_xrefs":["MSH:D001158","GOC:mtg_muscle","MA:0000708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery smooth muscle contraction","termid":"GO:0014824"}


id: FYPO:0001379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tacrolimus","synonyms":[{"name":"resistance to FK506","type":"exact"},{"name":"resistance to tacrolimus during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus","type":"exact"}],"termid":"FYPO:0001379"}


id: GO:0006488
data:
  {"annotated_genes":["SJAG_00437","SJAG_00747","SJAG_00924","SJAG_03311","SJAG_03656","SJAG_02102","SJAG_02903","SJAG_04821","SJAG_00394","SJAG_04952","SJAG_04770","SJAG_03764","SJAG_03774","SJAG_03056","SJAG_04954","SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71327,74459,83294,86803,89518,93881,93933,95486,95503,97754,98997,100391,104610,106352,107795,111885],"is_not":false,"summary":null,"term":"GO:0006488"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P.","definition_xrefs":["GOC:jl","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide-lipid intermediate biosynthetic process","termid":"GO:0006490"},{"relation_name":"is_a","term_name":"dolichol metabolic process","termid":"GO:0019348"},{"relation_name":"part_of","term_name":"protein N-linked glycosylation","termid":"GO:0006487"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_02102":null,"SJAG_02903":null,"SJAG_03056":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04952":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006629","GO:0006486","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dolichol-linked oligosaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"N-linked glycan precursor biosynthesis","type":"exact"},{"name":"N-linked glycan precursor biosynthetic process","type":"exact"},{"name":"dolichol-linked oligosaccharide anabolism","type":"exact"},{"name":"dolichol-linked oligosaccharide biosynthesis","type":"exact"},{"name":"dolichol-linked oligosaccharide formation","type":"exact"},{"name":"dolichol-linked oligosaccharide synthesis","type":"exact"},{"name":"oligosaccharide-PP-dolichol assembly","type":"exact"}],"termid":"GO:0006488","terms_by_termid":{"GO:0006488":null}}


id: PBO:0088115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar ATPase V0 domain subunit c'; involved in proton transport activity; hydrophobic integral membrane protein (proteolipid) containing four transmembrane segments; N and C termini are in the vacuolar lumen","termid":"PBO:0088115"}


id: GO:0030148
data:
  {"annotated_genes":["SJAG_02168","SJAG_01219","SJAG_02842","SJAG_03953","SJAG_01857","SJAG_01300","SJAG_00506","SJAG_02085","SJAG_03690","SJAG_02706","SJAG_02590","SJAG_00880","SJAG_02429","SJAG_00404","SJAG_02488","SJAG_05311","SJAG_04178","SJAG_01057","SJAG_04986","SJAG_02305","SJAG_00176","SJAG_04550","SJAG_01356","SJAG_03076","SJAG_04878","SJAG_04913","SJAG_02885","SJAG_03015"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72417,72743,73303,73331,76727,86301,87458,87600,89179,90730,95735,96899,97617,104936,112626],"is_not":false,"summary":null,"term":"GO:0030148"},{"annotations":[73951,76953,77840,104148,77649,75970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[74747,77997,90838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[92467,98363,101376,73426,75969,105027,77648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00176":null,"SJAG_00404":null,"SJAG_00506":null,"SJAG_00880":null,"SJAG_01057":null,"SJAG_01219":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01857":null,"SJAG_02085":null,"SJAG_02168":null,"SJAG_02305":null,"SJAG_02429":null,"SJAG_02488":null,"SJAG_02590":null,"SJAG_02706":null,"SJAG_02842":null,"SJAG_02885":null,"SJAG_03015":null,"SJAG_03076":null,"SJAG_03690":null,"SJAG_03953":null,"SJAG_04178":null,"SJAG_04550":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_04986":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PWY-5129"],"synonyms":[{"name":"sphingolipid anabolism","type":"exact"},{"name":"sphingolipid biosynthesis","type":"exact"},{"name":"sphingolipid formation","type":"exact"},{"name":"sphingolipid synthesis","type":"exact"}],"termid":"GO:0030148","terms_by_termid":{"GO:0030148":null,"GO:0046512":null,"GO:0046513":null,"GO:0051999":null}}


id: PBO:0070221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 154 pseudogene","termid":"PBO:0070221"}


id: GO:0030618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that is phosphorylated by a TGFbeta receptor and complexes with a common-partner mediator. The- heterocomplex translocates to the nucleus to regulate transcription.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity (obsolete GO:0030618)","synonyms":[{"name":"TGF-beta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, pathway-specific cytoplasmic mediator activity","type":"exact"},{"name":"pathway restricted SMAD protein","type":"related"},{"name":"pathway-restricted SMAD protein","type":"related"},{"name":"pathway-specific SMAD protein","type":"related"},{"name":"receptor regulated SMAD protein","type":"related"},{"name":"receptor-regulated SMAD protein","type":"related"}],"termid":"GO:0030618"}


id: PBO:0053643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 691","termid":"PBO:0053643"}


id: GO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dehydropipecolic acid reductase","termid":"GO:0062046"}


id: FYPO:0003353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation is normal (i.e. indistinguishable from wild type) during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA double-strand break formation at mating-type locus","synonyms":[{"name":"normal DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"normal DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"normal DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"normal DSB formation at mat1","type":"exact"},{"name":"normal DSB formation at mating-type locus","type":"exact"},{"name":"normal DSB formation proximal to mat1","type":"exact"},{"name":"normal gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"}],"termid":"FYPO:0003353"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: MOD:01222
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-formyl-L-serine.","definition_xrefs":["PubMed:15799070","PubMed:15627961","Unimod:122#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-formylated residue","termid":"MOD:01483"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-formyl-L-serine","synonyms":[{"name":"Formyl","type":"related"},{"name":"Formylation","type":"related"}],"termid":"MOD:01222"}


id: GO:1905011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphate ions from the cytosol across the vacuolar membrane and into the vacuolar lumen.","definition_xrefs":["PMID:26554016","GO_REF:0000078","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"transmembrane phosphate ion transport from cytosol to vacuole","secondary_identifiers":["GO:0007037"],"synonyms":[{"name":"vacuolar phosphate transport","type":"broad"}],"termid":"GO:1905011"}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000120","Reactome:R-HSA-3000074","Reactome:R-HSA-3132759"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: PBO:0072837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30 binding protein","termid":"PBO:0072837"}


id: PBO:0063137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin beta","termid":"PBO:0063137"}


id: PBO:0074067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 42","termid":"PBO:0074067"}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_00666","SJAG_04853","SJAG_00145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95628,97744],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[90745],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0073365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1 pseudogene 1","termid":"PBO:0073365"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: PBO:0059269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L33","termid":"PBO:0059269"}


id: GO:0047453
data:
  {"annotated_genes":["SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76706],"is_not":false,"summary":null,"term":"GO:0047453"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-6beta-hydroxy-1,4,5,6-tetrahydronicotinamide adenine dinucleotide + ATP = ADP + 3 H+ + NADH + phosphate.","definition_xrefs":["PMID:3061454","RHEA:19017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03669":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"ATP-dependent NAD(P)H-hydrate dehydratase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:4.2.1.93","KEGG_REACTION:R00129","Reactome:R-HSA-6806967","MetaCyc:4.2.1.93-RXN"],"synonyms":[{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase (ATP-hydrolysing)","type":"related"},{"name":"(6S)-beta-6-hydroxy-1,4,5,6-tetrahydronicotinamide-adenine-dinucleotide hydro-lyase(ATP-hydrolysing; NADH-forming)","type":"related"},{"name":"ATP-dependent H(4)NAD(P)OH dehydratase activity","type":"exact"},{"name":"ATP-dependent H4NAD(P)OH dehydratase activity","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide hydrate dehydratase activity","type":"broad"}],"termid":"GO:0047453","terms_by_termid":{"GO:0047453":null}}


id: FYPO:0000168
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114387,114231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the spindle assembly checkpoint of a mitotic cell cycle is abnormal. The mitotic spindle assembly checkpoint normally delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0007094","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic metaphase/anaphase transition","termid":"FYPO:0000200"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle assembly checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"abnormal mitotic spindle assembly checkpoint activation","type":"related"}],"termid":"FYPO:0000168","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: GO:0097166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lens epithelial cells, resulting in the expansion of a cell population. Lens epithelial cells make up the lens epithelium, which is located in the anterior portion of the lens between the lens capsule and the lens fibers and is a simple cuboidal epithelium. The epithelial cells of the lens regulate most of the homeostatic functions of the lens such as osmolarity and liquid volume. The lens epithelial cells also serve as the progenitors for new lens fibers. The lens epithelium constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.","definition_xrefs":["PMID:18423449","GOC:yaf","CL:0002224","Wikipedia:Lens_%28anatomy%29#Lens_epithelium"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"lens development in camera-type eye","termid":"GO:0002088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens epithelial cell proliferation","termid":"GO:0097166"}


id: PBO:0077219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 16 homolog pseudogene 2","termid":"PBO:0077219"}


id: PBO:0053380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 307","termid":"PBO:0053380"}


id: MOD:00529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex3HexNAc2P1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(3)HexNAc(2)P(1)","type":"related"},{"name":"Hex3HexNAc2P1","type":"related"}],"termid":"MOD:00529"}


id: GO:0150201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","GOC:bc","PMID:29377008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"part_of","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"positively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"}


id: GO:0021949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of a precerebellar neuronal precursor in which a cell move from the rhombic lip, orthogonal to the direction of radial migration and ultimately reside in the brainstem.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}


id: GO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte in response to an external stimulus.","definition_xrefs":["PMID:11696603","PMID:15173832","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte chemotaxis","termid":"GO:0002548"}


id: PBO:0044408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 1","termid":"PBO:0044408"}


id: GO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-C subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:9368779","PMID:11929129","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-C specific inhibitory MHC class I receptor activity","termid":"GO:0030110"}


id: PBO:0081173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 16","termid":"PBO:0081173"}


id: PBO:0091661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Cha4","termid":"PBO:0091661"}


id: PBO:0110499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPA1 pseudogene 2","termid":"PBO:0110499"}


id: PBO:0086202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; required for the stability of Oli1p (Atp9p) mRNA; also required for the Oli1p ring formation; YMR098C is not an essential gene","termid":"PBO:0086202"}


id: GO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"negatively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"negative regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070108"}


id: PBO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD binding oxidoreductase (predicted)","termid":"PBO:0000160"}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02686","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: PBO:0077751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 1 membrane trafficking protein","termid":"PBO:0077751"}


id: GO:0051630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into a cell, typically presynaptic neurons or glial cells. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transport","termid":"GO:0015870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"acetylcholine uptake","synonyms":[{"name":"acetylcholine import","type":"exact"}],"termid":"GO:0051630"}


id: PBO:0084958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb-related transcription factor; involved in regulating basal and induced expression of genes of the purine and histidine biosynthesis pathways; also involved in regulation of meiotic recombination at specific genes","termid":"PBO:0084958"}


id: FYPO:0003744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromere during vegetative growth","termid":"FYPO:0000634"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"abolished protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere during vegetative growth","type":"exact"},{"name":"protein localization to centromeric chromatin during vegetative growth abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003744"}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: PBO:0050989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT74 antisense RNA 1","termid":"PBO:0050989"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: PBO:0061752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2","termid":"PBO:0061752"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: PBO:0039402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 2","termid":"PBO:0039402"}


id: PATO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends earlier than the natural end time or reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased occurrence","termid":"PATO:0002052"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrested","secondary_identifiers":["PATO:0001508"],"synonyms":[{"name":"abolished","type":"exact"},{"name":"incomplete","type":"related"}],"termid":"PATO:0000297"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: PBO:0047761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor gamma","termid":"PBO:0047761"}


id: GO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-ornithine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-ornithine transmembrane transport","termid":"GO:1903352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-ornithine transmembrane export from vacuole","termid":"GO:0089706"}


id: PBO:0061018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1","termid":"PBO:0061018"}


id: PBO:0004362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbrin","termid":"PBO:0004362"}


id: PBO:0076550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 2","termid":"PBO:0076550"}


id: PBO:0087272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase involved in salt tolerance, nutrient response; functions in regulation of Trk1p-Trk2p potassium transporter; overexpression affects the Fe-S and lipoamide containing proteins in the mitochondrion; required for lipoylation of Lat1p, Kgd2p and Gcv3p; partially redundant with Hal5p; has similarity to Npr1p; localizes to the cytoplasm and mitochondrion","termid":"PBO:0087272"}


id: GO:0005643
data:
  {"annotated_genes":["SJAG_01460","SJAG_03281","SJAG_02520","SJAG_01013","SJAG_01065","SJAG_04017","SJAG_03299","SJAG_02094","SJAG_02424","SJAG_00962","SJAG_04472","SJAG_02757","SJAG_03449","SJAG_00840","SJAG_03300","SJAG_02274","SJAG_01293","SJAG_03593","SJAG_03200","SJAG_01185","SJAG_03847","SJAG_04721","SJAG_03986","SJAG_02661","SJAG_01834","SJAG_03907","SJAG_01374","SJAG_02425","SJAG_04148","SJAG_04379","SJAG_03729","SJAG_03873","SJAG_02210","SJAG_00093","SJAG_03836","SJAG_00298","SJAG_00178","SJAG_01833","SJAG_01909","SJAG_04284","SJAG_01358","SJAG_00521","SJAG_03103","SJAG_00641","SJAG_00471","SJAG_03795","SJAG_04645","SJAG_00375","SJAG_03182","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70361,73966,74901,75827,77485,78276,78463,83166,85546,86757,87374,87581,91216,91703,97428,99031,99093,101130,103124,104022,107001,111202,112501,114258,114349,114380,114381,114382,114386,114394,114395],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[71143,96875,76235,78712,89606],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[89607,98432,75018],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[75470,74544,70750],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[98433],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[110084,84746,111577,90566],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[105164,71781,105715,76925,78839,73231,72891,72683,73562,84755],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[114208],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"}]},"cv_name":"cellular_component","definition":"A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00521":null,"SJAG_00641":null,"SJAG_00840":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01185":null,"SJAG_01293":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01460":null,"SJAG_01584":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02094":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02424":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02661":null,"SJAG_02757":null,"SJAG_03103":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03281":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03449":null,"SJAG_03593":null,"SJAG_03729":null,"SJAG_03795":null,"SJAG_03836":null,"SJAG_03847":null,"SJAG_03873":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04645":null,"SJAG_04721":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear pore","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21733045":null,"PMID:21802294":null,"PMID:21873635":null,"PMID:24184107":null,"PMID:32109380":null,"PMID:33495454":null},"secondary_identifiers":["NIF_Subcellular:sao220861693","Wikipedia:Nuclear_pore","GO:0005644"],"synonyms":[{"name":"NPC","type":"exact"},{"name":"nuclear pore complex","type":"exact"},{"name":"nuclear pore membrane protein","type":"narrow"},{"name":"nucleopore","type":"exact"}],"termid":"GO:0005643","terms_by_termid":{"GO:0005643":null,"GO:0031080":null,"GO:0044611":null,"GO:0044612":null,"GO:0044613":null,"GO:0044614":null,"GO:0044615":null,"GO:0070762":null}}


id: PBO:0088383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex RNA-binding protein subunit 9","termid":"PBO:0088383"}


id: GO:0023049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a protein/peptide signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by protein/peptide mediator (obsolete GO:0023049)","synonyms":[{"name":"signal initiation by protein/peptide mediator","type":"exact"}],"termid":"GO:0023049"}


id: PBO:0091673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glycerophosphodiester transmembrane transporter","termid":"PBO:0091673"}


id: PBO:0066200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 1","termid":"PBO:0066200"}


id: PBO:0028163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP_binding","termid":"PBO:0028163"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: PBO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by CCAAT complex","termid":"PBO:0003050"}


id: FYPO:0002036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000002","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}


id: GO:0035704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a helper T cell in response to an external stimulus.","definition_xrefs":["CL:0000912","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell chemotaxis","synonyms":[{"name":"T-helper cell chemotaxis","type":"exact"}],"termid":"GO:0035704"}


id: PBO:0044539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAN domain BMP antagonist family member 5","termid":"PBO:0044539"}


id: PBO:0083989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent disulfide oxidoreductase; hydroperoxide and superoxide-radical responsive, heat-stable, with active site cysteine pair; protects cells from oxidative damage; GRX1 has a paralog, GRX2, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0083989"}


id: PBO:0067999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 301","termid":"PBO:0067999"}


id: PBO:0046837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 10","termid":"PBO:0046837"}


id: GO:0052083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont stops, prevents, or reduces the frequency, rate or extent of the cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"perturbation of host cell-mediated immune response","termid":"GO:0052155"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by symbiont of host cell-mediated immune response","secondary_identifiers":["GO:0052278"],"synonyms":[{"name":"down regulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host cell-mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host cell-mediated immune response","type":"narrow"},{"name":"negative regulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of host cell-based immune response","type":"exact"}],"termid":"GO:0052083"}


id: FYPO:0008008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic interphase in which the duration of cytoplasmic microtubule growth events is longer.","definition_xrefs":["PMID:22363481","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of cytoplasmic microtubule growth events during mitotic interphase","synonyms":[{"name":"longer cytoplasmic microtubule growth events during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe during mitotic interphase","type":"narrow"},{"name":"lower cytoplasmic microtubule catastrophe rate during mitotic interphase","type":"narrow"}],"termid":"FYPO:0008008"}


id: PBO:0076753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 3","termid":"PBO:0076753"}


id: GO:0030078
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Light harvesting complex associated with the reaction complex of photosynthetic purple bacteria.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"light-harvesting complex, core complex","termid":"GO:0030078"}


id: PBO:0051939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2A","termid":"PBO:0051939"}


id: PBO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_ornithine_level","termid":"PBO:0030104"}


id: PBO:0060720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8 pseudogene 1","termid":"PBO:0060720"}


id: PBO:0065046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B","termid":"PBO:0065046"}


id: PR:Q9UTN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A global transcription activator SNF2L2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02123","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit snf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.01","secondary_identifiers":["UniProtKB:Q9UTN6"],"synonyms":[{"name":"ATP-dependent helicase snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RSC complex subunit snf21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SMARCA2","type":"exact"}],"termid":"PR:Q9UTN6"}


id: PBO:0083977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p; involved in removal of two glucose residues from N-linked glycans during glycoprotein biogenesis in the ER; relocalizes from ER to cytoplasm upon DNA replication stress","termid":"PBO:0083977"}


id: GO:2001222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron migration","synonyms":[{"name":"regulation of neuron chemotaxis","type":"exact"},{"name":"regulation of neuron guidance","type":"related"},{"name":"regulation of neuronal migration","type":"exact"}],"termid":"GO:2001222"}


id: GO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylidenelophenol + S-adenosyl-L-methionine(1+) = (Z)-24-ethylidenelophenol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.143","RHEA:21044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"24-methylenesterol C-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05776","MetaCyc:2.1.1.143-RXN"],"synonyms":[{"name":"24-methylenelophenol C-24(1)-methyltransferase activity","type":"related"},{"name":"24-methylenelophenol C-241-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:24-methylenelophenol C-methyltransferase activity","type":"related"},{"name":"SMT(2) activity","type":"narrow"},{"name":"SMT2","type":"related"}],"termid":"GO:0030797"}


id: PBO:0057987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3913-1","termid":"PBO:0057987"}


id: GO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"icosatetraenoic acid binding","termid":"GO:0050543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"arachidonic acid binding","synonyms":[{"name":"arachidonate binding","type":"exact"}],"termid":"GO:0050544"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: GO:0102449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol oxoanion + S-adenosyl-L-methionine = 3-O-methylkaempferol + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"kaempferol 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13935"],"termid":"GO:0102449"}


id: GO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing metabolic enzymes whose purpose is the sequestration or concentration of metabolites and which has the appearance of a polygonal granule by electron microscopy.","definition_xrefs":["GOC:js","PMID:11844753","PMID:10498708","PMID:12923081","PMID:34058518","PMID:34340100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial microcompartment","synonyms":[{"name":"BAC","type":"broad"},{"name":"BMC","type":"broad"},{"name":"MCP","type":"broad"},{"name":"polyhedral organelle","type":"related"}],"termid":"GO:0031469"}


id: PBO:0027292
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_vegetative_cell_with_fragmented_septum","termid":"PBO:0027292"}


id: GO:0010084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the polarity of an animal organ axis is specified.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of animal organ axis polarity","termid":"GO:0010084"}


id: GO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of asymmetric cell division.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asymmetric cell division","termid":"GO:0009786"},{"relation_name":"is_a","term_name":"negative regulation of cell division","termid":"GO:0051782"},{"relation_name":"negatively_regulates","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of asymmetric cell division","synonyms":[{"name":"down regulation of asymmetric cell division","type":"exact"},{"name":"down-regulation of asymmetric cell division","type":"exact"},{"name":"downregulation of asymmetric cell division","type":"exact"},{"name":"inhibition of asymmetric cell division","type":"narrow"}],"termid":"GO:0045769"}


id: PBO:0081560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 484","termid":"PBO:0081560"}


id: PBO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.99.7","termid":"PBO:0003379"}


id: PBO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function depends on recruitment to the spindle pole body","termid":"PBO:0001386"}


id: SO:1000160
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertional duplication where a copy of the segment between the first two breaks listed is inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertional_duplication","termid":"SO:1000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_insertional_duplication","synonyms":[{"name":"(Drosophila)uDp","type":"related"},{"name":"unoriented insertional duplication","type":"exact"}],"termid":"SO:1000160"}


id: GO:0102744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate + NADPH = dihydrogeranylgeranyl-PP + NADP.","definition_xrefs":["GOC:pz","EC:1.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-geranyl-geranyl diphosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-7658"],"termid":"GO:0102744"}


id: GO:0008905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group from GTP or GDP to a mannose molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mannose-phosphate guanylyltransferase activity (obsolete GO:0008905)","termid":"GO:0008905"}


id: PBO:0044047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 1","termid":"PBO:0044047"}


id: PBO:0052136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 3","termid":"PBO:0052136"}


id: PBO:0077318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 53","termid":"PBO:0077318"}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"avenasterol-desaturase activity","secondary_identifiers":["MetaCyc:RXN-4209"],"termid":"GO:0102676"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: GO:0043151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via single-strand annealing.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via single-strand annealing","synonyms":[{"name":"DNA synthesis during double-strand break repair via single-strand annealing","type":"related"}],"termid":"GO:0043151"}


id: GO:0050820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of coagulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"coagulation","termid":"GO:0050817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of coagulation","synonyms":[{"name":"activation of coagulation","type":"narrow"},{"name":"positive regulation of clotting","type":"exact"},{"name":"stimulation of coagulation","type":"narrow"},{"name":"up regulation of coagulation","type":"exact"},{"name":"up-regulation of coagulation","type":"exact"},{"name":"upregulation of coagulation","type":"exact"}],"termid":"GO:0050820"}


id: GO:0008784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine = D-alanine.","definition_xrefs":["EC:5.1.1.1","RHEA:20249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"alanine racemase activity","secondary_identifiers":["MetaCyc:ALARACECAT-RXN","KEGG_REACTION:R00401"],"synonyms":[{"name":"L-alanine racemase activity","type":"related"}],"termid":"GO:0008784"}


id: GO:0120048
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90778],"is_not":false,"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + adenine(43) in U6 snRNA = S-adenosyl-L-homocysteine + N(6)-methyladenine(43) in U6 snRNA.","definition_xrefs":["PMID:28525753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"U6 snRNA (adenine-(43)-N(6))-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120048","terms_by_termid":{"GO:0120048":null}}


id: PBO:0080660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 5","termid":"PBO:0080660"}


id: GO:1901845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:17130302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell communication by electrical coupling","termid":"GO:0010651"},{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"},{"relation_name":"negatively_regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell communication by electrical coupling involved in cardiac conduction","synonyms":[{"name":"down regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"down-regulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"downregulation of cell communication by electrical coupling involved in cardiac conduction","type":"exact"},{"name":"inhibition of cell communication by electrical coupling involved in cardiac conduction","type":"narrow"}],"termid":"GO:1901845"}


id: GO:1900952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"positive regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900955"},{"relation_name":"positively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900952"}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: PR:O42962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog5 gene.","definition_xrefs":["UniProtKB:O42962","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.14c","synonyms":[{"name":"COG complex subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog5","type":"exact"}],"termid":"PR:O42962"}


id: PBO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate dehydrogenase","termid":"PBO:0061830"}


id: SO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An element that can exist within the promoter region of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"overlaps","term_name":"TF_binding_site","termid":"SO:0000235"},{"relation_name":"part_of","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_element","synonyms":[{"name":"promoter element","type":"exact"}],"termid":"SO:0001659"}


id: GO:0010058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates atrichoblast fate specification.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"regulates","term_name":"atrichoblast fate specification","termid":"GO:0010056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrichoblast fate specification","termid":"GO:0010058"}


id: GO:0102780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + sitosterol + O2 + NADPH = (22alpha)-hydroxy-sitosterol + H2O + NADP.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sitosterol hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7876"],"termid":"GO:0102780"}


id: GO:0050092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-tartrate + NAD+ = dihydroxyfumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.7","RHEA:18553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"meso-tartrate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02544","MetaCyc:MESO-TARTRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"meso-tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050092"}


id: GO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The heat generation process that results in a rise in body temperature above the normal, often as a response to infection.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute-phase response","termid":"GO:0006953"},{"relation_name":"is_a","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fever generation","secondary_identifiers":["Wikipedia:Fever"],"synonyms":[{"name":"pyrexia","type":"broad"}],"termid":"GO:0001660"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: GO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of glucose leads to a decrease in the frequency, rate, or extent of transcription of specific RNA polymerase II-transcribed genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite repression of transcription by glucose","termid":"GO:0045014"},{"relation_name":"is_a","term_name":"negative regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0061987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"carbon catabolite repression of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter by glucose","type":"narrow"}],"termid":"GO:0000433"}


id: GO:0014723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing calcium ion binding affinity of the myofibril.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by calcium ion signaling","termid":"GO:0014722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril","synonyms":[{"name":"regulation of calcium ion sensitivity of myofibril involved in skeletal muscle contraction","type":"exact"}],"termid":"GO:0014723"}


id: PBO:0044288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 51B","termid":"PBO:0044288"}


id: PBO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog","termid":"PBO:0043370"}


id: FYPO:0002257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuolar morphology","synonyms":[{"name":"abnormal vacuole morphology","type":"exact"},{"name":"vacuolar morphology: abnormal","type":"related"}],"termid":"FYPO:0002257"}


id: PBO:0028693
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_repeat_element_RNA_level","termid":"PBO:0028693"}


id: PBO:0110322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4 (PEL blood group)","termid":"PBO:0110322"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: PBO:0003488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E 4F complex subunit","termid":"PBO:0003488"}


id: PBO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Ppk11","termid":"PBO:0002452"}


id: PBO:0059077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein","termid":"PBO:0059077"}


id: PBO:0062537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 2 pseudogene","termid":"PBO:0062537"}


id: GO:0015051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of X-opioid receptors.","definition_xrefs":["InterPro:IPR001420"],"gene_count":0,"genotype_count":0,"name":"obsolete X-opioid receptor activity (obsolete GO:0015051)","synonyms":[{"name":"X-opioid receptor activity","type":"exact"}],"termid":"GO:0015051"}


id: GO:0005085
data:
  {"annotated_genes":["SJAG_03142","SJAG_05184","SJAG_02486","SJAG_04653","SJAG_04837","SJAG_03678","SJAG_01309","SJAG_02160","SJAG_01659","SJAG_04010","SJAG_00143","SJAG_02368","SJAG_02833","SJAG_01025","SJAG_00858","SJAG_04615","SJAG_02471","SJAG_05210","SJAG_04464","SJAG_04982","SJAG_02493","SJAG_03246","SJAG_03704","SJAG_02307","SJAG_02529","SJAG_04771","SJAG_02027","SJAG_02819","SJAG_00514","SJAG_03002","SJAG_04491","SJAG_02004","SJAG_03581","SJAG_02645","SJAG_01030","SJAG_00807","SJAG_03600","SJAG_00216","SJAG_01415","SJAG_02248","SJAG_03089","SJAG_06588","SJAG_01576","SJAG_01699","SJAG_03488","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70185,72122,72317,73560,73581,74233,74817,77141,77194,77408,78885,83309,83843,85596,86865,87136,87762,88410,89488,89672,89933,90585,91634,91889,92235,92872,93275,93313,93520,93987,94640,95332,95333,100524,101797,102367,105420,105962,106287,109159,109205,109999,110694,111658,112987,113001],"is_not":false,"summary":null,"term":"GO:0005085"}]},"cv_name":"molecular_function","definition":"Stimulates the exchange of GDP to GTP on a signaling GTPase, changing its conformation to its active form. Guanine nucleotide exchange factors (GEFs) act by stimulating the release of guanosine diphosphate (GDP) to allow binding of guanosine triphosphate (GTP), which is more abundant in the cell under normal cellular physiological conditions.","definition_xrefs":["GOC:kd","PMID:23303910","PMID:27218782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase regulator activity","termid":"GO:0030695"}],"gene_count":46,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00216":null,"SJAG_00514":null,"SJAG_00807":null,"SJAG_00858":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01309":null,"SJAG_01415":null,"SJAG_01576":null,"SJAG_01659":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02027":null,"SJAG_02160":null,"SJAG_02248":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02529":null,"SJAG_02645":null,"SJAG_02819":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03246":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04010":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04771":null,"SJAG_04837":null,"SJAG_04982":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_06588":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-2029445","Reactome:R-HSA-442732","Reactome:R-HSA-5654663","Reactome:R-HSA-5655347","Reactome:R-HSA-5672965","Reactome:R-HSA-8877813","Reactome:R-HSA-350769","Reactome:R-HSA-8875318","Reactome:R-HSA-1306972","Reactome:R-HSA-428750","Reactome:R-HSA-5655277","Reactome:R-HSA-9619803","Reactome:R-HSA-9014296","Reactome:R-HSA-180687","Reactome:R-HSA-9672170","Reactome:R-HSA-2424477","Reactome:R-HSA-9018747","Reactome:R-HSA-5218829","Reactome:R-HSA-9018768","Reactome:R-HSA-9032798","Reactome:R-HSA-5218850","Reactome:R-HSA-156913","Reactome:R-HSA-399938","Reactome:R-HSA-3928628","Reactome:R-HSA-9036301","Reactome:R-HSA-9634418","Reactome:R-HSA-5654392","Reactome:R-HSA-9665408","Reactome:R-HSA-9665009","Reactome:R-HSA-9013435","Reactome:R-HSA-416530","GO:0008433","Reactome:R-HSA-8851827","Reactome:R-HSA-420883","Reactome:R-HSA-177945","Reactome:R-HSA-205039","Reactome:R-HSA-442273","Reactome:R-HSA-9026891","Reactome:R-HSA-3928592","Reactome:R-HSA-749453","Reactome:R-HSA-380073","Reactome:R-HSA-109817","Reactome:R-HSA-9665700","Reactome:R-HSA-6811429","Reactome:R-HSA-8851877","Reactome:R-HSA-8875320","Reactome:R-HSA-1168636","Reactome:R-HSA-428535","Reactome:R-HSA-5637806","Reactome:R-HSA-8877451","Reactome:R-HSA-392195","Reactome:R-HSA-8876454","Reactome:R-HSA-8876616","Reactome:R-HSA-8877760","Reactome:R-HSA-9660824","Reactome:R-HSA-379044","Reactome:R-HSA-5655241","Reactome:R-HSA-210977","Reactome:R-HSA-9693111","Reactome:R-HSA-1250463","Reactome:R-HSA-9703441","Reactome:R-HSA-8876191","Reactome:R-HSA-9751201","Reactome:R-HSA-3928633","Reactome:R-HSA-9013143","Reactome:R-HSA-416588","Reactome:R-HSA-8982640","Reactome:R-HSA-9672163","GO:0017034","Reactome:R-HSA-442291","Reactome:R-HSA-5623508","Reactome:R-HSA-9032067","Reactome:R-HSA-392054","Reactome:R-HSA-2029451","Reactome:R-HSA-8877308","Reactome:R-HSA-186834","Reactome:R-HSA-8848618","Reactome:R-HSA-9018804","Reactome:R-HSA-9033292","GO:0008321","Reactome:R-HSA-5655326","Reactome:R-HSA-8877475","Reactome:R-HSA-6811418","GO:0005090","Reactome:R-HSA-9014433","Reactome:R-HSA-9607304","Reactome:R-HSA-5654647","GO:0030676","Reactome:R-HSA-5686318","Reactome:R-HSA-8851899","GO:0005086","Reactome:R-HSA-8877311","Reactome:R-HSA-109807","Reactome:R-HSA-5617816","Reactome:R-HSA-5654600","Reactome:R-HSA-3928642","Reactome:R-HSA-8850041","GO:0005089","Reactome:R-HSA-1250383","Reactome:R-HSA-8877998","Reactome:R-HSA-8876615","Reactome:R-HSA-8982637","Reactome:R-HSA-3965444","Reactome:R-HSA-392870","Reactome:R-HSA-939265","Reactome:R-HSA-3928612","Reactome:R-HSA-9639286","Reactome:R-HSA-9666428","Reactome:R-HSA-114544","Reactome:R-HSA-9680385","GO:0017112","Reactome:R-HSA-6811414","Reactome:R-HSA-5686071","Reactome:R-HSA-8964604","Reactome:R-HSA-6807868","Reactome:R-HSA-5623521","Reactome:R-HSA-5694409","Reactome:R-HSA-8876193","Reactome:R-HSA-9670436","GO:0005087","Reactome:R-HSA-428917","Reactome:R-HSA-5654426","Reactome:R-HSA-2485180","Reactome:R-HSA-389348","Reactome:R-HSA-5654413","Reactome:R-HSA-9695853","Reactome:R-HSA-187746","GO:0017132","Reactome:R-HSA-418850","Reactome:R-HSA-418856","Reactome:R-HSA-419166","Reactome:R-HSA-1225957","Reactome:R-HSA-5218839","Reactome:R-HSA-9664991","Reactome:R-HSA-5637808","Reactome:R-HSA-171026","Reactome:R-HSA-2179407","Reactome:R-HSA-194518","Reactome:R-HSA-4093336","Reactome:R-HSA-9013159","Reactome:R-HSA-8876190","Reactome:R-HSA-8980691","Reactome:R-HSA-379048","Reactome:R-HSA-1225951","Reactome:R-HSA-389350","GO:0005088","Reactome:R-HSA-9640167","Reactome:R-HSA-9666430","Reactome:R-HSA-9018825","Reactome:R-HSA-170979","Reactome:R-HSA-1433415","Reactome:R-HSA-2029467","Reactome:R-HSA-203977","Reactome:R-HSA-399995","Reactome:R-HSA-751029","Reactome:R-HSA-9013023","GO:0016220","Reactome:R-HSA-8875568","Reactome:R-HSA-1250498","Reactome:R-HSA-8876188","Reactome:R-HSA-9017491","Reactome:R-HSA-9665707","Reactome:R-HSA-177938","Reactome:R-HSA-3928651","Reactome:R-HSA-418579","Reactome:R-HSA-3928632","Reactome:R-HSA-5654402","Reactome:R-HSA-8876837","Reactome:R-HSA-8875591","Reactome:R-HSA-825631","GO:0019839","Reactome:R-HSA-2424476","Reactome:R-HSA-442314","Reactome:R-HSA-9624845","Reactome:R-HSA-9665404","Reactome:R-HSA-354173","Reactome:R-HSA-8877612","GO:0016219","Reactome:R-HSA-9029158","Reactome:R-HSA-445064","Reactome:R-HSA-9013109","Reactome:R-HSA-1433471","Reactome:R-HSA-169904","Reactome:R-HSA-2730840","Reactome:R-HSA-5654618","Reactome:R-HSA-9018817"],"synonyms":[{"name":"ARF guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"GDP-dissociation stimulator activity","type":"exact"},{"name":"GDS","type":"exact"},{"name":"GEF","type":"exact"},{"name":"GNRP","type":"narrow"},{"name":"Rab guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rac guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ral guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ran guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rap guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Ras guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"Rho guanine nucleotide exchange factor","type":"exact"},{"name":"Rho guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"RhoGEF","type":"exact"},{"name":"Sar guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"cAMP-dependent guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"guanyl-nucleotide release factor activity","type":"exact"},{"name":"guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:0005085","terms_by_termid":{"GO:0005085":null}}


id: PBO:0004893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr7","termid":"PBO:0004893"}


id: GO:1904630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["PMID:19765580","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to diterpene","termid":"GO:1904629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diterpene","termid":"GO:1904630"}


id: PBO:0083462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene KTR3","termid":"PBO:0083462"}


id: PBO:0084836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial pyrimidine nucleotide transporter; imports pyrimidine nucleoside triphosphates and exports pyrimidine nucleoside monophosphates; member of the mitochondrial carrier family","termid":"PBO:0084836"}


id: PBO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.58","termid":"PBO:0002386"}


id: MOD:00101
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to L-lysine amide.","definition_xrefs":["RESID:AA0092","PubMed:6579533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine amide","synonyms":[{"name":"(2S)-2,6-diaminohexanamide","type":"exact"},{"name":"L-lysine amide","type":"exact"},{"name":"LysN","type":"exact"},{"name":"MOD_RES Lysine amide","type":"exact"},{"name":"amidated L-lysine","type":"exact"},{"name":"lysinamide","type":"exact"}],"termid":"MOD:00101"}


id: PBO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 1","termid":"PBO:0046559"}


id: PBO:0087918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor required for septum destruction after cytokinesis; part of the RAM network that regulates polarity and morphogenesis; NES phosphorylation by RAM network kinase Cbk1p blocks nuclear exit in mother cells during the M/G1 transition, causing asymmetric localization to daughter cell nuclei, and increased Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; Spt16p is required for nuclear exclusion during G1","termid":"PBO:0087918"}


id: PBO:0028489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_index","termid":"PBO:0028489"}


id: PR:O13855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.01c","synonyms":[{"name":"Spom972h-SPAC1A6.01c","type":"exact"}],"termid":"PR:O13855"}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: SO:0000226
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine_tRNA_primary_transcript","synonyms":[{"name":"serine tRNA primary transcript","type":"exact"}],"termid":"SO:0000226"}


id: GO:0035420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that contributes to an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in innate immune response (obsolete GO:0035420)","synonyms":[{"name":"MAPKKK cascade involved in innate immune response","type":"exact"}],"termid":"GO:0035420"}


id: GO:0033362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in two enzymatic steps.","definition_xrefs":["MetaCyc:PWY-5097","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway","synonyms":[{"name":"lysine anabolism via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine biosynthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine formation via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"},{"name":"lysine synthesis via diaminopimelate, diaminopimelate-aminotransferase pathway","type":"exact"}],"termid":"GO:0033362"}


id: GO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to sorbitol","termid":"GO:0072708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sorbitol","synonyms":[{"name":"cellular response to glucitol","type":"exact"}],"termid":"GO:0072709"}


id: PBO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Rdh54","termid":"PBO:0000543"}


id: PBO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential function does not appear to reside in its role in the folding or retention of misfolded proteins","termid":"PBO:0001331"}


id: GO:1903136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cuprous ion, copper(1+).","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000067","PMID:24567322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion binding","termid":"GO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"cuprous ion binding","synonyms":[{"name":"Cu(+) binding","type":"exact"},{"name":"Cu(I) binding","type":"exact"},{"name":"copper(1+) binding","type":"exact"}],"termid":"GO:1903136"}


id: PBO:0057312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517c","termid":"PBO:0057312"}


id: GO:0032736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-13 production","termid":"GO:0032656"},{"relation_name":"positively_regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-13 production","secondary_identifiers":["GO:0045368","GO:2000667"],"synonyms":[{"name":"activation of interleukin-13 production","type":"narrow"},{"name":"positive regulation of IL-13 production","type":"exact"},{"name":"positive regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-13 secretion","type":"narrow"},{"name":"stimulation of interleukin-13 production","type":"narrow"},{"name":"up regulation of interleukin-13 production","type":"exact"},{"name":"up-regulation of interleukin-13 production","type":"exact"},{"name":"upregulation of interleukin-13 production","type":"exact"}],"termid":"GO:0032736"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: PBO:0056454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0056454"}


id: PBO:0046040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma","termid":"PBO:0046040"}


id: GO:0061137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch bud increases radially. A branch bud is the initial area of outgrowth in the formation of a new branch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation","termid":"GO:0061137"}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: PBO:0050524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D12","termid":"PBO:0050524"}


id: PBO:0041734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase kinase 2","termid":"PBO:0041734"}


id: PBO:0055663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 1","termid":"PBO:0055663"}


id: GO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of norepinephrine uptake","synonyms":[{"name":"regulation of levarterenol uptake","type":"exact"},{"name":"regulation of noradrenaline uptake","type":"exact"},{"name":"regulation of norepinephrine import","type":"exact"}],"termid":"GO:0051621"}


id: GO:0140620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces a DNA strand exchange activity.","definition_xrefs":["PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0030234","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"DNA strand exchange inhibitor activity","termid":"GO:0140620"}


id: PBO:0061135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 1 pseudogene 1","termid":"PBO:0061135"}


id: FYPO:0002318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ergosterol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular sterol level","termid":"FYPO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular ergosterol level","synonyms":[{"name":"increased cellular ergosterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular ergosterol level during vegetative growth","type":"exact"},{"name":"increased ergosterol accumulation","type":"related"}],"termid":"FYPO:0002318"}


id: PBO:0012041
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lives if zapped","termid":"PBO:0012041"}


id: PBO:0050075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxymethylcytosine binding, ES cell specific","termid":"PBO:0050075"}


id: PBO:0075483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily D member 1","termid":"PBO:0075483"}


id: FYPO:0003985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular amino acid level","synonyms":[{"name":"decreased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"decreased cellular amino acid level during vegetative growth","type":"exact"},{"name":"decreased level of amino acid in cell","type":"exact"},{"name":"reduced cellular amino acid level","type":"exact"},{"name":"reduced level of amino acid in cell","type":"exact"}],"termid":"FYPO:0003985"}


id: PBO:0028061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G2_phase","termid":"PBO:0028061"}


id: SO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a J-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"J_gene_recombination_feature","termid":"SO:0000302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_nonamer","synonyms":[{"name":"J nonamer","type":"exact"},{"name":"J-NONAMER","type":"exact"}],"termid":"SO:0000514"}


id: PBO:0056558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 6","termid":"PBO:0056558"}


id: GO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of a sieve element.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element differentiation","termid":"GO:0090603"}


id: GO:0044715
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95029],"is_not":false,"summary":null,"term":"GO:0044715"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction 8-oxo-dGDP + H2O = 8-oxo-dGMP + phosphate.","definition_xrefs":["PMID:22556419","GOC:pde","RHEA:32063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-dGDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.58","Reactome:R-HSA-2395876","Reactome:R-HSA-2395879"],"termid":"GO:0044715","terms_by_termid":{"GO:0044715":null}}


id: PBO:0050053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, T (pseudogene)","termid":"PBO:0050053"}


id: PBO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_methyltransferase_activity","termid":"PBO:0030433"}


id: PBO:0072880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS pseudogene 1","termid":"PBO:0072880"}


id: GO:0006828
data:
  {"annotated_genes":["SJAG_01007","SJAG_03850","SJAG_04096","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103996,70839,99231,90912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"The directed movement of manganese (Mn) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"manganese ion transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0006828","terms_by_termid":{"GO:0071421":null}}


id: GO:0030157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine. Pancreatic juice is slightly alkaline and contains numerous enzymes and inactive enzyme precursors including alpha-amylase, chymotrypsinogen, lipase, procarboxypeptidase, proelastase, prophospholipase A2, ribonuclease, and trypsinogen. Its high concentration of bicarbonate ions helps to neutralize the acid from the stomach.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pancreatic juice secretion","termid":"GO:0030157"}


id: CHEBI:35696
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"Chloride of cobalt in which the metal is in the +2 oxidation state.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt dichloride","termid":"CHEBI:35696"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108322],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[70225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: PBO:0081097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 22","termid":"PBO:0081097"}


id: GO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an open rectifier voltage-gated channel. An open rectifier current-voltage relationship is one in which the direction of rectification depends on the external potassium ion concentration.","definition_xrefs":["GOC:mah","PMID:8917578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"open rectifier potassium channel activity","termid":"GO:0005252"}


id: PBO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase","termid":"PBO:0000729"}


id: PBO:0076016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 10","termid":"PBO:0076016"}


id: PBO:0090499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ndc80 complex subunit Ndc80","termid":"PBO:0090499"}


id: FYPO:0007932
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of hydroxyurea and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of hydroxyurea and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to hydroxyurea and methyl methanesulfonate","synonyms":[{"name":"sensitive to hydroxyurea and MMS","type":"exact"}],"termid":"FYPO:0007932"}


id: PBO:0085175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omega-class glutathione transferase; induced under oxidative stress; putative peroxisomal localization","termid":"PBO:0085175"}


id: PBO:0091558
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TetratricoPeptide Repeat","termid":"PBO:0091558"}


id: GO:0031560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that has a role in determining cell polarity, found at the neck of a fungal bud before and during cytokinesis.","definition_xrefs":["PMID:9632790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarisome","termid":"GO:0000133"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck polarisome","termid":"GO:0031560"}


id: PBO:0067795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 97","termid":"PBO:0067795"}


id: PBO:0069372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 632, pseudogene","termid":"PBO:0069372"}


id: PBO:0062386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 5 pseudogene","termid":"PBO:0062386"}


id: PBO:0034151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_subsequence_of","termid":"PBO:0034151"}


id: GO:0044485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinogenolysis, a process that degrades fibrinogen at a variety of Arg-Lys bonds, thus impairing fibrinogen clotting in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:fj","PMID:17433397","GOC:jl","PMID:17544404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in depletion of circulating fibrinogen in another organism","termid":"GO:0044536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in fibrinogenolysis in another organism","synonyms":[{"name":"envenomation resulting in fibrinogenolysis in other organism","type":"exact"}],"termid":"GO:0044485"}


id: GO:0061777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A DNA binding activity in which a protein complex interacts selectively and non-covalently with single DNA duplex to tightly encircle the DNA.","definition_xrefs":["GOC:vw","GOC:dph","PMID:1349852"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA clamp activity (obsolete GO:0061777)","termid":"GO:0061777"}


id: PBO:0004821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS binding protein Abp2","termid":"PBO:0004821"}


id: PBO:0061899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 5","termid":"PBO:0061899"}


id: GO:2000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034183"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:2000718"},{"relation_name":"negatively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, centromeric","termid":"GO:0071960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric mitotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of mitotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at mitosis","type":"exact"}],"termid":"GO:2000719"}


id: GO:0006669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphinganine-1-phosphate metabolic process","termid":"GO:0006668"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate biosynthetic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate biosynthesis","type":"exact"},{"name":"dihydrosphingosine-1-phosphate biosynthetic process","type":"exact"},{"name":"sphinganine-1-phosphate anabolism","type":"exact"},{"name":"sphinganine-1-phosphate biosynthesis","type":"exact"},{"name":"sphinganine-1-phosphate formation","type":"exact"},{"name":"sphinganine-1-phosphate synthesis","type":"exact"}],"termid":"GO:0006669"}


id: GO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Myogenic Regulatory Factor (MRF), a member of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors.","definition_xrefs":["PMID:10966875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bHLH transcription factor binding","termid":"GO:0043425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MRF binding","secondary_identifiers":["GO:0051576","GO:0051578","GO:0051579","GO:0051577"],"synonyms":[{"name":"Mrf4 binding","type":"narrow"},{"name":"Myf5 binding","type":"narrow"},{"name":"MyoD binding","type":"narrow"},{"name":"myogenin binding","type":"narrow"}],"termid":"GO:0043426"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: PBO:0054222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1603","termid":"PBO:0054222"}


id: PBO:0087286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Signal transducing MAP kinase kinase; involved in pheromone response where it phosphorylates Fus3p; involved in the pseudohyphal/invasive growth pathway where it phosphorylates of Kss1p; phosphorylated by Ste11p; degraded by ubiquitin pathway","termid":"PBO:0087286"}


id: PBO:0039020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFTPH divergent transcript","termid":"PBO:0039020"}


id: PBO:0063068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 1","termid":"PBO:0063068"}


id: PBO:0068471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 48, pseudogene","termid":"PBO:0068471"}


id: PBO:0053015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 2","termid":"PBO:0053015"}


id: GO:0030725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the cytoplasmic bridges between developing spermatogonial or oogonial cysts.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"intercellular bridge organization","termid":"GO:0043063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germline ring canal formation","synonyms":[{"name":"ring canal formation","type":"broad"}],"termid":"GO:0030725"}


id: PBO:0042827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 5A pseudogene 1","termid":"PBO:0042827"}


id: GO:1902040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed dormancy process.","definition_xrefs":["GOC:TermGenie","PMID:23378449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed dormancy process","synonyms":[{"name":"activation of seed dormancy","type":"related"},{"name":"activation of seed dormancy process","type":"narrow"},{"name":"positive regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy process","type":"exact"},{"name":"up-regulation of seed dormancy","type":"related"},{"name":"up-regulation of seed dormancy process","type":"exact"},{"name":"upregulation of seed dormancy","type":"related"},{"name":"upregulation of seed dormancy process","type":"exact"}],"termid":"GO:1902040"}


id: FYPO:0006752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at subtelomere during vegetative growth","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K16 acetylation at subtelomeric heterochromatin region during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased subtelomeric heterochromatin histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006752"}


id: PBO:0062365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily Y member 1","termid":"PBO:0062365"}


id: FYPO:0000914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase (also known as glutamine synthetase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate-ammonia ligase activity","synonyms":[{"name":"normal GS activity","type":"exact"},{"name":"normal glutamine synthetase activity","type":"exact"},{"name":"normal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0000914"}


id: GO:0070373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["ISBN:0121245462","ISBN:0896039986","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK1 and ERK2 cascade","termid":"GO:0070372"},{"relation_name":"negatively_regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"down regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"down-regulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"downregulation of ERK1 and ERK2 cascade","type":"exact"},{"name":"inhibition of ERK1 and ERK2 cascade","type":"narrow"},{"name":"negative regulation of ERK cascade","type":"broad"},{"name":"negative regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"negative regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"negative regulation of ERK1 cascade","type":"narrow"},{"name":"negative regulation of ERK1/2 cascade","type":"exact"},{"name":"negative regulation of ERK2 cascade","type":"narrow"},{"name":"negative regulation of MAPK1 cascade","type":"narrow"},{"name":"negative regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070373"}


id: PBO:0073480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 1","termid":"PBO:0073480"}


id: GO:0052919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (R)-hydroxynitrile = an aliphatic aldehyde or ketone + hydrogen cyanide.","definition_xrefs":["EC:4.1.2.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxynitrilase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aliphatic (R)-hydroxynitrile lyase activity","synonyms":[{"name":"(R)-HNL activity","type":"broad"},{"name":"(R)-hydroxynitrile lyase activity","type":"broad"},{"name":"(R)-oxynitrilase activity","type":"broad"}],"termid":"GO:0052919"}


id: PBO:0089507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor for cytoplasmic methionyl-and glutamyl-tRNA synthetases Asc1","termid":"PBO:0089507"}


id: GO:0004953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an icosanoid to initiate a change in cell activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"icosanoid receptor activity","synonyms":[{"name":"eicosanoid receptor activity","type":"exact"}],"termid":"GO:0004953"}


id: GO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide metabolic process","termid":"GO:0010727"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species biosynthetic process","termid":"GO:1903427"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"negative regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010730"}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: PBO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YOR212W is not functional ortholog","termid":"PBO:0003635"}


id: SO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a change in the structure or number of a chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_variation_attribute","synonyms":[{"name":"chromosomal variation attribute","type":"exact"}],"termid":"SO:0001509"}


id: PBO:0068374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 167","termid":"PBO:0068374"}


id: GO:0000966
data:
  {"annotated_genes":["SJAG_04224","SJAG_01623","SJAG_03796","SJAG_04524","SJAG_04527","SJAG_04582","SJAG_00195","SJAG_06613","SJAG_00772","SJAG_04006","SJAG_00955","SJAG_04767","SJAG_02526","SJAG_02250","SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[76906,70596,72780,104332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[102809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000465"},{"annotations":[78027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[90983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[61023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099116"},{"annotations":[113658,108711,71276,94018,99972,90312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_02250":null,"SJAG_02526":null,"SJAG_03796":null,"SJAG_04006":null,"SJAG_04224":null,"SJAG_04233":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04767":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"RNA 5' end processing","type":"exact"}],"termid":"GO:0000966","terms_by_termid":{"GO:0000465":null,"GO:0000472":null,"GO:0000964":null,"GO:0000967":null,"GO:0001682":null,"GO:0099116":null,"GO:0106410":null}}


id: PBO:0044313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member D1","termid":"PBO:0044313"}


id: PR:O14190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00502","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.02c","secondary_identifiers":["UniProtKB:O14190"],"synonyms":[{"name":"Spom972h-ALG13","type":"exact"},{"name":"asparagine-linked glycosylation protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14190"}


id: PBO:0062813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 4","termid":"PBO:0062813"}


id: PBO:0065297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 1","termid":"PBO:0065297"}


id: PBO:0079551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 4","termid":"PBO:0079551"}


id: GO:2000025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"leaf formation","termid":"GO:0010338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf formation","termid":"GO:2000025"}


id: MOD:01332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C labeled L-leucine.","definition_xrefs":["PubMed:12716131","Unimod:188#L"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-leucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01332"}


id: FYPO:0005646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the kinetochore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal kinetochore morphology","synonyms":[{"name":"abnormal kinetochore structure","type":"narrow"},{"name":"kinetochore defects","type":"exact"}],"termid":"FYPO:0005646"}


id: FYPO:0003592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the anaphase-promoting complex (APC) occurs to a greater extent than normal. The protein whose binding to the APC may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased anaphase-promoting complex binding","termid":"FYPO:0003592"}


id: GO:0052128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive energy taxis","termid":"GO:0052128"}


id: PBO:0041033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2C","termid":"PBO:0041033"}


id: PBO:0016074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease (predicted)","termid":"PBO:0016074"}


id: PBO:0042375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200R1L antisense RNA 1","termid":"PBO:0042375"}


id: FYPO:0002104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000004","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"viable vegetative cell with normal cell shape","synonyms":[{"name":"viable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002104"}


id: PR:O43034
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hot15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3B9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.05","synonyms":[{"name":"Spom972h-hot15","type":"exact"}],"termid":"PR:O43034"}


id: PBO:0042331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD55 molecule (Cromer blood group)","termid":"PBO:0042331"}


id: GO:0030008
data:
  {"annotated_genes":["SJAG_03663","SJAG_01415","SJAG_00850","SJAG_02655","SJAG_04618","SJAG_02750","SJAG_04021","SJAG_02525","SJAG_04358","SJAG_00820","SJAG_04837","SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105128,84423,85085,97973,74424,92865,94633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[74425,105129,85086,95254,97974,84424,92866,71509,94634,98800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[97975,94635,73341,76666,105130,92867,74426,84425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A large complex that acts as a tethering factor involved in transporting vesicles from the ER through the Golgi to the plasma membrane. A TRAPP (transport protein particle) complex has a core set of proteins which are joined by specific subunits depending on the cellular component where a given TRAPP complex is active.","definition_xrefs":["PMID:22669257","GOC:vw","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_04021":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TRAPP complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:TRAPP_complex"],"synonyms":[{"name":"TRAPP1","type":"narrow"},{"name":"TRAPP2","type":"narrow"},{"name":"transport protein particle","type":"exact"},{"name":"transport protein particle complex","type":"exact"}],"termid":"GO:0030008","terms_by_termid":{"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: PBO:0030661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man8GlcNAc_level","termid":"PBO:0030661"}


id: GO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outer ear are generated and organized. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear morphogenesis","termid":"GO:0042473"}


id: PBO:0070968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 6","termid":"PBO:0070968"}


id: PBO:0078683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (TTT) 16-1","termid":"PBO:0078683"}


id: FYPO:0005776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing v.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on acetaldehyde","synonyms":[{"name":"normal cell population growth in presence of acetaldehyde","type":"exact"},{"name":"normal cell population growth on acetaldehyde","type":"exact"},{"name":"normal vegetative cell population growth on acetaldehyde","type":"exact"}],"termid":"FYPO:0005776"}


id: GO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that activates or increases the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G0 to G1 transition","termid":"GO:0070316"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of G0 to G1 transition","termid":"GO:0070318"}


id: GO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + L-ornithine = H2O + L-glutamate + 3,4-dihydro-2H-pyrrole-2-carboxylate.","definition_xrefs":["MetaCyc:ORNITHINELYSINE-AMINOTRANSFERASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ornithine(lysine) transaminase activity (obsolete GO:0050155)","synonyms":[{"name":"L-ornithine(L-lysine):2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"L-ornithine:2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"lysine/ornithine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"ornithine(lysine) aminotransferase activity","type":"exact"}],"termid":"GO:0050155"}


id: PBO:0062263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily E member 1 pseudogene","termid":"PBO:0062263"}


id: PBO:0042284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1d molecule","termid":"PBO:0042284"}


id: GO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fucose, the pentose 6-deoxygalactose.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fucose binding","termid":"GO:0042806"}


id: GO:0102989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 H+ + 9,12,15-cis-hexadecatrienoyl-CoA + 3 malonyl-CoA(5-) = 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + 4 coenzyme A + 4 carbon dioxide.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"5-pentadecatrienylresorcinol synthase activity","secondary_identifiers":["MetaCyc:RXN-9618"],"termid":"GO:0102989"}


id: GO:0019345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate S-sulfo-L-cysteine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"cysteine biosynthetic process via S-sulfo-L-cysteine","synonyms":[{"name":"cysteine anabolism via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine biosynthesis via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine biosynthetic process via S-sulpho-L-cysteine","type":"exact"},{"name":"cysteine formation via S-sulfo-L-cysteine","type":"exact"},{"name":"cysteine synthesis via S-sulfo-L-cysteine","type":"exact"}],"termid":"GO:0019345"}


id: FYPO:0006683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006683"}


id: GO:1903353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nucleus organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16943282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus organization","synonyms":[{"name":"regulation of nuclear morphology","type":"related"},{"name":"regulation of nuclear organisation","type":"exact"},{"name":"regulation of nuclear organization","type":"exact"},{"name":"regulation of nuclear organization and biogenesis","type":"related"},{"name":"regulation of nucleus organization and biogenesis","type":"related"}],"termid":"GO:1903353"}


id: GO:0033921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->3)-alpha-D-galactosidic linkages in Aerobacter aerogenes capsular polysaccharide.","definition_xrefs":["EC:3.2.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosidase activity","termid":"GO:0015925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"capsular-polysaccharide endo-1,3-alpha-galactosidase activity","secondary_identifiers":["MetaCyc:3.2.1.87-RXN"],"synonyms":[{"name":"aerobacter-capsular-polysaccharide galactohydrolase activity","type":"related"},{"name":"capsular polysaccharide galactohydrolase activity","type":"related"},{"name":"polysaccharide depolymerase activity","type":"related"}],"termid":"GO:0033921"}


id: FYECO:0000113
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which Calcofluor White was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Calcofluor White","termid":"FYECO:0000113"}


id: GO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monoferuloyl di-(hydroxyferuloyl) spermidine + NADPH + O2 = tri-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072552"}


id: FYPO:0005786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a shorter distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PMID:27729451","PomBase:mah","GO:0000729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"decreased spatial extent of double-strand break processing","synonyms":[{"name":"decreased spatial extent of DSB processing","type":"exact"},{"name":"decreased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"decreased spatial extent of double-strand break resection","type":"exact"},{"name":"reduced spatial extent of double-strand break processing","type":"exact"}],"termid":"FYPO:0005786"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: PBO:0012007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12 (predicted)","termid":"PBO:0012007"}


id: PBO:0004908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific protein Spo2","termid":"PBO:0004908"}


id: GO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Similar to cathepsin L, but with much less activity on the terminal bond of Z-Phe-Arg-NHMec, and more activity on the terminal bond of Z-Val-Val-Arg-Xaa compounds.","definition_xrefs":["EC:3.4.22.27"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin S activity (obsolete GO:0004218)","synonyms":[{"name":"cathepsin S activity","type":"exact"}],"termid":"GO:0004218"}


id: PBO:0003345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3 alpha subunit (p135) (predicted)","termid":"PBO:0003345"}


id: GO:0061188
data:
  {"annotated_genes":["SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76344],"is_not":false,"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of ribosomal DNA heterochromatin formation.","definition_xrefs":["PMID:10388812","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of rDNA heterochromatin formation","termid":"GO:0061187"},{"relation_name":"negatively_regulates","term_name":"rDNA heterochromatin formation","termid":"GO:0000183"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03255":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of rDNA heterochromatin formation","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"negative regulation of chromatin silencing at rDNA","type":"broad"},{"name":"negative regulation of ribosomal DNA heterochromatin assembly","type":"exact"},{"name":"negative regulation of ribosomal DNA heterochromatin formation","type":"exact"}],"termid":"GO:0061188","terms_by_termid":{"GO:0061188":null}}


id: PBO:0052339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinase D interacting substrate 220","termid":"PBO:0052339"}


id: PBO:0076001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STIL centriolar assembly protein","termid":"PBO:0076001"}


id: PBO:0078334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-6","termid":"PBO:0078334"}


id: PBO:0057133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 216b","termid":"PBO:0057133"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: PBO:0067045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 65, pseudogene","termid":"PBO:0067045"}


id: PBO:0056628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MED8 antisense RNA 1","termid":"PBO:0056628"}


id: PBO:0053664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 841","termid":"PBO:0053664"}


id: FYPO:0003961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"abnormal PDAT activity","type":"exact"}],"termid":"FYPO:0003961"}


id: SO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the micronuclei of a cell.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micronuclear_sequence","synonyms":[{"name":"micronuclear sequence","type":"exact"}],"termid":"SO:0000084"}


id: GO:0032018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylbutanol + NADP+ = 2-methylbutanal + NADPH + H+.","definition_xrefs":["GOC:mah","PMID:12210903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-methylbutanol:NADP oxidoreductase activity","synonyms":[{"name":"2-methylbutanal reductase (NADP) activity","type":"exact"},{"name":"2-methylbutyraldehyde reductase (NADP) activity","type":"exact"}],"termid":"GO:0032018"}


id: GO:0036118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the aggregation, arrangement and bonding together of a hyaluranon cable, a cable structure, surrounding some cell types (e.g. proximal or bronchial tubular epithelial cells), and composed of hyaluranon (HA), a ubiquitous connective tissue glycosaminoglycan.","definition_xrefs":["PMID:16900089","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"hyaluranon cable assembly","synonyms":[{"name":"HA cable assembly","type":"exact"}],"termid":"GO:0036118"}


id: PBO:0074314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 4","termid":"PBO:0074314"}


id: GO:0007599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of body fluid levels","termid":"GO:0050878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemostasis","secondary_identifiers":["Wikipedia:Hemostasis"],"termid":"GO:0007599"}


id: GO:0046651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a lymphocyte population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"},{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte proliferation","termid":"GO:0046651"}


id: GO:0038056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway by stopping, preventing or reducing the frequency, rate or extent of secretion of a member of the BMP family of proteins from the signaling cell.","definition_xrefs":["PMID:21750037","GOC:sart","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway by negative regulation of BMP secretion (obsolete GO:0038056)","synonyms":[{"name":"negative regulation of BMP signaling pathway by negative regulation of bone morphogenetic protein secretion","type":"exact"},{"name":"negative regulation of BMP signalling pathway by negative regulation of BMP secretion","type":"exact"}],"termid":"GO:0038056"}


id: GO:1901659
data:
  {"annotated_genes":["SJAG_03881","SJAG_00134","SJAG_01859","SJAG_03096","SJAG_00694","SJAG_05334","SJAG_02179","SJAG_04735","SJAG_04265","SJAG_05029","SJAG_06634","SJAG_01781","SJAG_01261","SJAG_00044","SJAG_01070","SJAG_04264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[111983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[70225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[70226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94118,94119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[85499,73224,89163,89377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[109043,93287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[72138,73418,74254,90304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosyl compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycosyl compound anabolism","type":"exact"},{"name":"glycosyl compound biosynthesis","type":"exact"},{"name":"glycosyl compound formation","type":"exact"},{"name":"glycosyl compound synthesis","type":"exact"}],"termid":"GO:1901659","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0031591":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0056645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 6","termid":"PBO:0056645"}


id: PBO:0034075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ribosomally_translates_to","termid":"PBO:0034075"}


id: GO:0050873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["PMID:12588810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell differentiation","synonyms":[{"name":"brown adipocyte cell differentiation","type":"exact"},{"name":"brown adipocyte differentiation","type":"exact"}],"termid":"GO:0050873"}


id: GO:1902734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["PMID:18385238","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902734"}


id: GO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to steroid hormone","synonyms":[{"name":"response to steroid hormone stimulus","type":"exact"}],"termid":"GO:0048545"}


id: PBO:0039422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 2","termid":"PBO:0039422"}


id: PBO:0055523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2957","termid":"PBO:0055523"}


id: PBO:0067929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 231","termid":"PBO:0067929"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["EC:2.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylhistidine N-methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine:N-alpha-dimethyl-L-histidine N-alpha-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:alpha-N-dimethyl-L-histidine alpha-N-methyltransferase activity","type":"related"},{"name":"histidine-alpha-N-methyltransferase activity","type":"broad"},{"name":"methylhistidine methyltransferase activity","type":"related"}],"termid":"GO:0052705"}


id: GO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"calcium-independent cell-matrix adhesion","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0007161"}


id: PBO:0082929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic and mitochondrial alanyl-tRNA synthetase; required for protein synthesis; point mutation (cdc64-1 allele) causes cell cycle arrest at G1; lethality of null mutation is functionally complemented by human homolog AARS; mutations in human homolog AARS are associated with autoimmune disease polymyositis/dermatomyositis and with hereditary peripheral neuropathy, Charcot-Marie-Tooth (CMT) disease","termid":"PBO:0082929"}


id: PBO:0055163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2583","termid":"PBO:0055163"}


id: PBO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family (predicted)","termid":"PBO:0003787"}


id: GO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete viral transmission by vector (obsolete GO:0044009)","termid":"GO:0044009"}


id: GO:0072002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Malpighian tubule over time, from its formation to the mature structure. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","FBbt:00005786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"renal tubule development","termid":"GO:0061326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule development","termid":"GO:0072002"}


id: FYPO:0004514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype in which a cell has no septum, is elongated, and is viable.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated aseptate vegetative cell (obsolete FYPO:0004514)","synonyms":[{"name":"viable elongated aseptate cell during mitotic cell cycle","type":"related"},{"name":"viable elongated aseptate cell during vegetative growth","type":"exact"},{"name":"viable long aseptate cell","type":"exact"}],"termid":"FYPO:0004514"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: PBO:0039270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate B","termid":"PBO:0039270"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: GO:0010190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of cytochrome b6f complex, a complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cytochrome b6f complex assembly","synonyms":[{"name":"cytochrome b6f complex biogenesis","type":"exact"}],"termid":"GO:0010190"}


id: PBO:0062603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily P member 1","termid":"PBO:0062603"}


id: PBO:0089584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain","termid":"PBO:0089584"}


id: PBO:0059625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier 1","termid":"PBO:0059625"}


id: PBO:0064257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A5","termid":"PBO:0064257"}


id: GO:0140416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function regulator that inhibits the activity of a transcription regulator via direct binding and/or post-translational modification.","definition_xrefs":["PMID:10652346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"transcription regulator inhibitor activity","synonyms":[{"name":"DNA-binding transcription factor inhibitor activity","type":"narrow"}],"termid":"GO:0140416"}


id: GO:0034167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"regulation of TLR10 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034167"}


id: PBO:0081151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91 zinc finger protein, atypical E3 ubiquitin ligase","termid":"PBO:0081151"}


id: GO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"}


id: PBO:0043284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G pseudogene 1","termid":"PBO:0043284"}


id: FYPO:0007269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering is normal (i.e. indistinguishable from wild type). Telomere clustering gathers telomeres during or prior to tethering to the nuclear periphery during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0120110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase mitotic telomere clustering during vegetative growth","synonyms":[{"name":"normal interphase mitotic telomere clustering during mitotic cell cycle","type":"related"},{"name":"normal telomere clustering during vegetative growth","type":"exact"}],"termid":"FYPO:0007269"}


id: PATO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of unequal length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scalene triangular","termid":"PATO:0002308"}


id: PBO:0083728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane; involved in elongation of very long-chain fatty acids; evolutionarily conserved, similar to mammalian PTPLA and PTPLB; involved in sphingolipid biosynthesis and protein trafficking","termid":"PBO:0083728"}


id: PBO:0079142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 5","termid":"PBO:0079142"}


id: GO:0000700
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of single bases present in mismatches by the cleavage the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000700","terms_by_termid":{"GO:0000701":null}}


id: GO:2001263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of C-C chemokine binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of C-C chemokine binding","termid":"GO:2001263"}


id: FYPO:0005558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule bundle","secondary_identifiers":["FYPO:0005795"],"synonyms":[{"name":"abnormal microtubule array","type":"related"},{"name":"abnormal MT bundle","type":"exact"},{"name":"abnormal microtubule bundle physical object quality","type":"exact"},{"name":"abnormal microtubule bundle structure","type":"narrow"}],"termid":"FYPO:0005558"}


id: FYPO:0006075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 25S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mature rRNA level","termid":"FYPO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased mature 25S rRNA level","synonyms":[{"name":"increased 25S rRNA level","type":"broad"},{"name":"increased mature 25S rRNA accumulation","type":"related"},{"name":"increased mature 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 25S rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 25S rRNA transcript level","type":"exact"}],"termid":"FYPO:0006075"}


id: GO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:bf","GOC:mah","EC:2.7.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity (obsolete GO:0004702)","secondary_identifiers":["EC:2.7.11.-"],"synonyms":[{"name":"receptor signaling protein serine/threonine kinase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine kinase activity","type":"exact"}],"termid":"GO:0004702"}


id: PBO:0077002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 4","termid":"PBO:0077002"}


id: PBO:0063408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 4","termid":"PBO:0063408"}


id: PBO:0027303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_thioredoxin-disulfide_reductase_activity","termid":"PBO:0027303"}


id: GO:0046761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a curvature in the host plasma membrane around which the virion particle assembles.","definition_xrefs":["VZ:1947","PMID:9394621","GOC:bf","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"},{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from plasma membrane","secondary_identifiers":["GO:0046766","GO:0046767"],"synonyms":[{"name":"plasma membrane viral budding","type":"exact"},{"name":"plasma membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from plasma membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from plasma membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from plasma membrane","type":"exact"},{"name":"virus budding from plasma membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from plasma membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046761"}


id: PBO:0059295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L45 pseudogene 1","termid":"PBO:0059295"}


id: FYPO:0007190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is increased along the length of the chromosome arms during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase","synonyms":[{"name":"increased mitotic sister chromatid cohesion along chromosome arms during interphase","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during interphase of mitotic cell cycle","type":"exact"},{"name":"increased sister chromatid cohesion along chromosome arms during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0007190"}


id: FYPO:0007504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone demethylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone demethylase activity","termid":"FYPO:0007503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000002","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone demethylase activity (H3-K9 specific)","synonyms":[{"name":"histone demethylase activity (H3-K9 specific) abolished","type":"exact"}],"termid":"FYPO:0007504"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: GO:0061138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a branched epithelium are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of a branching epithelium","termid":"GO:0061138"}


id: GO:0048321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an axial mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"axial mesoderm formation","termid":"GO:0048320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell differentiation","synonyms":[{"name":"axial mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048321"}


id: PATO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular potency that is the capacity to form multiple differentiated cell types of a specific lineage and lack self renewing capacity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligopotent","termid":"PATO:0001401"}


id: GO:0034135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 2 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 2 signaling pathway","termid":"GO:0034134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 2 signaling pathway","synonyms":[{"name":"regulation of TLR2 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034135"}


id: GO:0033449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GUU codon-amino acid adaptor activity","synonyms":[{"name":"GTT codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033449"}


id: SO:1000082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant affects the stability of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000082 sequence variant_affecting_transcript_stability (obsolete SO:1000082)","synonyms":[{"name":"mutation affecting transcript stability","type":"related"},{"name":"sequence variant affecting transcript stability","type":"exact"}],"termid":"SO:1000082"}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: MOD:00851
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled deamidated residue","termid":"MOD:00851"}


id: FYPO:0003755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle. In fission yeast, the characteristics of wild type cells of the sequenced strain (972 h-) or the isogenic h+ or h90 strains are regarded as normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"inheres_in","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype","synonyms":[{"name":"abnormal cell phenotype during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype during mitotic cell cycle","type":"related"},{"name":"abnormal vegetative fission yeast cell phenotype","type":"exact"}],"termid":"FYPO:0003755"}


id: PBO:0069759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1042, pseudogene","termid":"PBO:0069759"}


id: PATO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000872 anxious (obsolete PATO:0000872)","termid":"PATO:0000872"}


id: FYPO:0007014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5.8S ribosomal RNA measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"},{"relation_name":"is_a","term_name":"normal mature ncRNA level","termid":"FYPO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal mature 5.8S rRNA level","synonyms":[{"name":"normal 5.8S rRNA level","type":"broad"},{"name":"normal mature 5.8S rRNA accumulation","type":"related"},{"name":"normal mature 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"normal mature 5.8S rRNA transcript level","type":"exact"}],"termid":"FYPO:0007014"}


id: GO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of bacterium","termid":"GO:0070944"},{"relation_name":"part_of","term_name":"defense response to Gram-negative bacterium","termid":"GO:0050829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of gram-negative bacterium","synonyms":[{"name":"neutrophil mediated killing of gram-negative bacterium","type":"exact"}],"termid":"GO:0070945"}


id: GO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonyl-L-leucine + H2O + H+ = L-leucine + benzyl alcohol + CO2.","definition_xrefs":["EC:3.5.1.64","RHEA:18901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N(alpha)-benzyloxycarbonylleucine hydrolase activity","secondary_identifiers":["MetaCyc:3.5.1.64-RXN","KEGG_REACTION:R02552"],"synonyms":[{"name":"alpha-N-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylleucine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase IV","type":"related"},{"name":"nalpha-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonylleucine hydrolase activity","type":"related"}],"termid":"GO:0047413"}


id: PBO:0090662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Ghs1","termid":"PBO:0090662"}


id: PBO:0044750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 31","termid":"PBO:0044750"}


id: PBO:0048822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 7","termid":"PBO:0048822"}


id: MOD:00154
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-(8alpha-FAD)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:7391034","RESID:AA0145","Unimod:50#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(8alpha-FAD)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]oxyphenyl)propanoic acid","type":"exact"},{"name":"8alpha-(O4'-tyrosyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES O-8alpha-FAD tyrosine","type":"exact"},{"name":"O-8 alpha-Flavin [FAD])- (of Tyrosine)","type":"exact"},{"name":"O4'-(8alpha-FAD)-L-tyrosine","type":"exact"},{"name":"O8aFADTyr","type":"exact"}],"termid":"MOD:00154"}


id: GO:0035407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a threonine residue at position 11 of the histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-T11 phosphorylation (obsolete GO:0035407)","termid":"GO:0035407"}


id: PBO:0075984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staufen double-stranded RNA binding protein 1","termid":"PBO:0075984"}


id: SO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 56th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K56_acetylation_site","synonyms":[{"name":"H3K56 acetylation site","type":"exact"},{"name":"H3K56ac","type":"exact"}],"termid":"SO:0001945"}


id: PBO:0063703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidoglycan recognition protein 2","termid":"PBO:0063703"}


id: PBO:0024820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf5 (predicted)","termid":"PBO:0024820"}


id: GO:0034138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 3.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 3 signaling pathway","synonyms":[{"name":"TLR3 signaling pathway","type":"exact"},{"name":"toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034138"}


id: PBO:0072317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 3","termid":"PBO:0072317"}


id: GO:0044588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to laminaribiose, a disaccharide.","definition_xrefs":["GOC:tt","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"laminaribiose binding","termid":"GO:0044588"}


id: PBO:0064320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 2","termid":"PBO:0064320"}


id: PR:Q9UT98
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pos5 gene.","definition_xrefs":["UniProtKB:Q9UT98","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH kinase pos5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.01c","synonyms":[{"name":"Spom972h-pos5","type":"exact"}],"termid":"PR:Q9UT98"}


id: PBO:0065341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prune exopolyphosphatase pseudogene 1","termid":"PBO:0065341"}


id: GO:1900609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving F-9775A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"F-9775A metabolic process","synonyms":[{"name":"F-9775A metabolism","type":"exact"}],"termid":"GO:1900609"}


id: GO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"opioid peptide activity","termid":"GO:0001515"}


id: GO:0050063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + low-density lipoprotein L-serine = ADP + low-density lipoprotein O-phospho-L-serine.","definition_xrefs":["EC:2.7.11.29","MetaCyc:LOW-DENSITY-LIPOPROTEIN-KINASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete low-density-lipoprotein particle receptor kinase activity (obsolete GO:0050063)","secondary_identifiers":["MetaCyc:2.7.11.29-RXN"],"synonyms":[{"name":"ATP:low-density-lipoprotein receptor-L-serine O-phosphotransferase activity","type":"related"},{"name":"ATP:low-density-lipoprotein-L-serine O-phosphotransferase activity","type":"related"},{"name":"LDL receptor kinase activity","type":"related"},{"name":"STK7","type":"related"},{"name":"[low-density lipoprotein receptor] kinase activity","type":"exact"},{"name":"low-density lipoprotein receptor kinase activity","type":"related"},{"name":"low-density-lipoprotein kinase activity","type":"broad"},{"name":"low-density-lipoprotein receptor kinase (phosphorylating) activity","type":"related"},{"name":"low-density-lipoprotein receptor kinase activity","type":"exact"}],"termid":"GO:0050063"}


id: RO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner_in","termid":"RO:0002461"}


id: PBO:0056000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056000"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7D (pseudogene)","termid":"PBO:0051355"}


id: GO:0034915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methyl-3-oxooctanoyl-CoA + CoA = acetyl-CoA + 2-methylhexanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-methylhexanoyl-CoA C-acetyltransferase activity","secondary_identifiers":["EC:2.3.1.-"],"termid":"GO:0034915"}


id: PBO:0083130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Tyr-tRNA(Tyr) deacylase; functions in protein translation, may affect nonsense suppression via alteration of the protein synthesis machinery; ubiquitous among eukaryotes","termid":"PBO:0083130"}


id: PBO:0073770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 3","termid":"PBO:0073770"}


id: GO:0016213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (6Z,9Z,12Z)-octadecatrienoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O. Can also use a substrate with 3 double bonds (a (9Z,12Z,15Z)-octadecatrienoyl-CoA and add a fourth double bond (a (6Z,9Z,12Z,15Z)-octadecatetraenoyl-CoA).","definition_xrefs":["PMID:12713571","PMID:7212717","RHEA:47144","RHEA:47140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"linoleoyl-CoA desaturase activity","secondary_identifiers":["EC:1.14.19.3","Reactome:R-HSA-2046084","Reactome:R-HSA-2046099","MetaCyc:1.14.19.3-RXN","Reactome:R-HSA-2046097","Reactome:R-HSA-2046096"],"synonyms":[{"name":"delta(6)-acyl CoA desaturase activity","type":"broad"},{"name":"delta(6)-desaturase activity","type":"broad"},{"name":"delta(6)-fatty acyl-CoA desaturase activity","type":"broad"},{"name":"delta6-acyl CoA desaturase activity","type":"related"},{"name":"delta6-desaturase activity","type":"related"},{"name":"delta6-fatty acyl-CoA desaturase activity","type":"related"},{"name":"fatty acid 6-desaturase activity","type":"broad"},{"name":"fatty acid delta(6)-desaturase activity","type":"broad"},{"name":"fatty acid delta6-desaturase activity","type":"related"},{"name":"linoleate desaturase activity","type":"related"},{"name":"linoleic acid desaturase activity","type":"related"},{"name":"linoleic desaturase activity","type":"related"},{"name":"linoleoyl CoA desaturase activity","type":"exact"},{"name":"linoleoyl-coenzyme A desaturase activity","type":"exact"},{"name":"long-chain fatty acid delta(6)-desaturase activity","type":"broad"},{"name":"long-chain fatty acid delta6-desaturase activity","type":"related"}],"termid":"GO:0016213"}


id: PBO:0089682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box protein Hap2","termid":"PBO:0089682"}


id: MOD:00975
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(37)Cl labeled 3'-chlorotyrosine","termid":"MOD:00975"}


id: GO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate determination","termid":"GO:0048374"},{"relation_name":"positively_regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"activation of lateral mesodermal cell fate determination","type":"narrow"},{"name":"positive regulation of lateral plate mesodermal cell fate determination","type":"exact"},{"name":"stimulation of lateral mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"upregulation of lateral mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048376"}


id: GO:0102638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl diphosphate = [1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + diphosphoric acid.","definition_xrefs":["EC:2.5.1.105","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"[1-(2-amino-7-methyl-4-oxo-7,8-dihydro-3H-pteridin-6-yl)]ethyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-15734"],"termid":"GO:0102638"}


id: GO:0021504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the median and lateral hinge points in the neural folds. These are created by apical constriction and basal expansion of the underlying neural cells. The median hinge point extends for the entire length of the neural tube, and the lateral hinge points do not form in the spinal cord region of the neural tube.","definition_xrefs":["PMID:15806586","GO_REF:0000021","GOC:cls","GOC:dph","PMID:13679871","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural fold bending","termid":"GO:0021503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural fold hinge point formation","synonyms":[{"name":"neural fold furrowing","type":"narrow"}],"termid":"GO:0021504"}


id: PBO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family (predicted)","termid":"PBO:0004558"}


id: GO:0046148
data:
  {"annotated_genes":["SJAG_04944","SJAG_05283","SJAG_01372","SJAG_03961","SJAG_03173","SJAG_01786","SJAG_01155","SJAG_03862","SJAG_02896","SJAG_04109","SJAG_04397","SJAG_02876","SJAG_01841","SJAG_00097","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77202,78597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[73949,109101,100580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[86655,87983,91942,78513,67705,91359,112117,90045],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[75895,71531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pigment anabolism","type":"exact"},{"name":"pigment biosynthesis","type":"exact"},{"name":"pigment formation","type":"exact"},{"name":"pigment synthesis","type":"exact"}],"termid":"GO:0046148","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: GO:0071819
data:
  {"annotated_genes":["SJAG_03752","SJAG_00641","SJAG_00087","SJAG_03599"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84254,94037,107000,109514],"is_not":false,"summary":null,"term":"GO:0071819"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of SAGA-type complexes SAGA and SLIK, and mediates deubiquitination of histone H2B. In S. cerevisiae, the DUBm consists of the proteins Ubp8p, Sgf11p, Sus1p, and Sgf73p.","definition_xrefs":["PMID:19226466","PMID:20395473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00641":null,"SJAG_03599":null,"SJAG_03752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DUBm complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SAGA DUBm complex","type":"narrow"},{"name":"deubiquitinating module","type":"exact"},{"name":"deubiquitination module","type":"exact"}],"termid":"GO:0071819","terms_by_termid":{"GO:0071819":null}}


id: GO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a cell is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"localization of cell","synonyms":[{"name":"cell localization","type":"exact"},{"name":"establishment and maintenance of cell localization","type":"exact"},{"name":"establishment and maintenance of localization of cell","type":"exact"},{"name":"localisation of cell","type":"exact"}],"termid":"GO:0051674"}


id: PBO:0086238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that is required for vacuolar H+-ATPase (V-ATPase) function; peripheral membrane protein; not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)","termid":"PBO:0086238"}


id: PBO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Ppe2","termid":"PBO:0036478"}


id: FYPO:0004213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0001985","FYPO:0000138","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004213"}


id: PBO:0071128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 130","termid":"PBO:0071128"}


id: GO:0046024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase III that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046024)","synonyms":[{"name":"activation of transcription from RNA polymerase III promoter during mitosis","type":"narrow"},{"name":"mitotic activation of transcription from Pol III promoter","type":"exact"},{"name":"positive regulation of transcription from Pol III promoter during mitosis","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase III promoter, mitotic","type":"exact"},{"name":"stimulation of transcription from RNA polymerase III promoter during mitosis","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"},{"name":"upregulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046024"}


id: GO:0097197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pre-organized unit composed either of adhesion molecules (mainly integrins and members of the Ig superfamily), signaling receptors and/or enzyme-enriched plasma membrane domains that compartmentalizes cellular processes. Tetraspanin-enriched microdomains might be specially suited for the regulation of avidity of adhesion receptors and the compartmentalization of enzymatic activities.","definition_xrefs":["PMID:21930792","GOC:ans","PMID:19709882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"tetraspanin-enriched microdomain","synonyms":[{"name":"TEM","type":"exact"},{"name":"membrane tetraspanin-enriched microdomain","type":"exact"}],"termid":"GO:0097197"}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0063157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 3","termid":"PBO:0063157"}


id: GO:1904277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wax biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24692420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of wax biosynthetic process","termid":"GO:1904276"},{"relation_name":"negatively_regulates","term_name":"wax biosynthetic process","termid":"GO:0010025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of wax biosynthetic process","synonyms":[{"name":"down regulation of wax anabolism","type":"exact"},{"name":"down regulation of wax biosynthesis","type":"exact"},{"name":"down regulation of wax biosynthetic process","type":"exact"},{"name":"down regulation of wax formation","type":"exact"},{"name":"down regulation of wax synthesis","type":"exact"},{"name":"down-regulation of wax anabolism","type":"exact"},{"name":"down-regulation of wax biosynthesis","type":"exact"},{"name":"down-regulation of wax biosynthetic process","type":"exact"},{"name":"down-regulation of wax formation","type":"exact"},{"name":"down-regulation of wax synthesis","type":"exact"},{"name":"downregulation of wax anabolism","type":"exact"},{"name":"downregulation of wax biosynthesis","type":"exact"},{"name":"downregulation of wax biosynthetic process","type":"exact"},{"name":"downregulation of wax formation","type":"exact"},{"name":"downregulation of wax synthesis","type":"exact"},{"name":"inhibition of wax anabolism","type":"narrow"},{"name":"inhibition of wax biosynthesis","type":"narrow"},{"name":"inhibition of wax biosynthetic process","type":"narrow"},{"name":"inhibition of wax formation","type":"narrow"},{"name":"inhibition of wax synthesis","type":"narrow"},{"name":"negative regulation of wax anabolism","type":"exact"},{"name":"negative regulation of wax biosynthesis","type":"exact"},{"name":"negative regulation of wax formation","type":"exact"},{"name":"negative regulation of wax synthesis","type":"exact"}],"termid":"GO:1904277"}


id: PBO:0031701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_export","termid":"PBO:0031701"}


id: PBO:0034250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_input_(obsolete_RO:0002401)","termid":"PBO:0034250"}


id: GO:0097334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a perphenazine stimulus. Perphenazine is a phenothiazine derivative having a chloro substituent at the 2-position and a 3-[4-(2-hydroxyethyl)piperazin-1-yl]propyl group at the N-10 position.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to perphenazine","termid":"GO:0097334"}


id: PBO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 2","termid":"PBO:0075225"}


id: FYPO:0005689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested before cell separation takes place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"},{"relation_name":"is_a","term_name":"binucleate aseptate vegetative cell","termid":"FYPO:0004562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000004","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","synonyms":[{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cytokinetic cell separation","type":"exact"},{"name":"inviable binucleate cell with mitotic cell cycle arrest before septation","type":"related"},{"name":"inviable cell with nuclear division arrest without septation (normal cell length)","type":"exact"},{"name":"lethal; binucleate aseptate cell with mitotic cell cycle arrest before cell separation","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0005689"}


id: PBO:0043710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 7","termid":"PBO:0043710"}


id: GO:1905013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","PMID:12140278","PMID:19843166","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of NAD metabolic process","termid":"GO:1902689"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","termid":"GO:1905012"},{"relation_name":"negatively_regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"down regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"down-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"down-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"downregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"downregulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"inhibition of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"inhibition of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"negative regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905013"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: GO:0090571
data:
  {"annotated_genes":["SJAG_03095","SJAG_00958","SJAG_00290","SJAG_00861","SJAG_04921"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102369,94413,86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160051"},{"annotations":[103831,86363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase II promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00290":null,"SJAG_00861":null,"SJAG_00958":null,"SJAG_03095":null,"SJAG_04921":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase II transcription repressor complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090571","terms_by_termid":{"GO:0017054":null,"GO:0160051":null}}


id: PBO:0066303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 5","termid":"PBO:0066303"}


id: GO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mercury ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mercury ion","termid":"GO:0046689"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mercury ion","synonyms":[{"name":"cellular response to mercuric ion","type":"exact"},{"name":"cellular response to mercury","type":"exact"}],"termid":"GO:0071288"}


id: PBO:0078511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 5","termid":"PBO:0078511"}


id: GO:0006101
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94967],"is_not":false,"summary":null,"term":"GO:0006101"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"citrate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrate metabolism","type":"exact"}],"termid":"GO:0006101","terms_by_termid":{"GO:0006101":null}}


id: GO:0010152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The final stages of microgametogenesis after the trinucleate stage has been reached resulting in viable pollen grains.","definition_xrefs":["PMID:11595796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen maturation","termid":"GO:0010152"}


id: PBO:0077194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM2 domain containing 2","termid":"PBO:0077194"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: GO:0004771
data:
  {"annotated_genes":["SJAG_02068","SJAG_04790","SJAG_00158"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98783,99430,110265],"is_not":false,"summary":null,"term":"GO:0004771"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid.","definition_xrefs":["EC:3.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_02068":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sterol esterase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:10100","MetaCyc:STEROL-ESTERASE-RXN","Reactome:R-HSA-6813720","Reactome:R-HSA-192417","Reactome:R-HSA-8865667"],"synonyms":[{"name":"acylcholesterol lipase activity","type":"related"},{"name":"cholesterase activity","type":"related"},{"name":"cholesterol ester hydrolase activity","type":"related"},{"name":"cholesterol ester synthase activity","type":"narrow"},{"name":"cholesterol esterase activity","type":"narrow"},{"name":"cholesteryl ester hydrolase activity","type":"related"},{"name":"cholesteryl ester synthase activity","type":"related"},{"name":"cholesteryl esterase activity","type":"related"},{"name":"sterol ester hydrolase activity","type":"related"},{"name":"steryl-ester acylhydrolase activity","type":"related"},{"name":"triterpenol esterase activity","type":"related"}],"termid":"GO:0004771","terms_by_termid":{"GO:0004771":null}}


id: PBO:0082002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 3","termid":"PBO:0082002"}


id: PBO:0083910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent NAD(P)H:quinone reductase; role in apoptosis-like cell death; may be involved in quinone detoxification; expression elevated at low temperature; sequesters the Cin5p transcription factor in the cytoplasm in complex with the proteasome under reducing conditions","termid":"PBO:0083910"}


id: GO:0070705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of one or more nucleotides.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA nucleotide insertion","termid":"GO:0070705"}


id: GO:0031043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 7 O-glycan structure, GalNAc-alpha-(1->6)-GalNAc.","definition_xrefs":["GOC:pr","PMID:10580130","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycan processing","termid":"GO:0016266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"O-glycan processing, core 7","termid":"GO:0031043"}


id: GO:0036486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of trunk neural crest cells from the neural tube, travelling ventrally through the anterior half of each sclerotome. Trunk neural crest cells that remain in the sclerotome form the dorsal root ganglia containing the sensory neurons. Trunk neural crest cells that continue more ventrally form the sympathetic ganglia, the adrenal medulla, and the nerve clusters surrounding the aorta.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:16319111","PMID:19386662","GOC:mat"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trunk neural crest cell migration","termid":"GO:0036484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral trunk neural crest cell migration","synonyms":[{"name":"trunk NCC migration through anterior sclerotome","type":"exact"},{"name":"trunk NCC migration within somite","type":"exact"},{"name":"ventral trunk NCC migration","type":"exact"}],"termid":"GO:0036486"}


id: PBO:0073625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIGLEC10 antisense RNA 1","termid":"PBO:0073625"}


id: PR:O13910
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar ribonucleoprotein protein MPP10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00881","PRO:DNx","PANTHER:PTHR17039:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar ribonucleoprotein protein mpp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.03","secondary_identifiers":["UniProtKB:O13910"],"synonyms":[{"name":"Spom972h-MPHOSPH10","type":"exact"}],"termid":"PR:O13910"}


id: PBO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR101","termid":"PBO:0001730"}


id: GO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001196)","termid":"GO:0001196"}


id: GO:0140092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A brain-specific SWI/SNF-type complex that contains eight or nine proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes. Compared to the neuron-specific nBAF complex (GO:0071565) it does not contain DPF1, DPF3 or SMARCC1 or their orthologs. May contain PB1/BAF180.","definition_xrefs":["PMID:8895581","PMID:12620226","PMID:15525990","PMID:17920018","PMID:8804307","PMID:17640523","GOC:bhm","PMID:12368262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"bBAF complex","synonyms":[{"name":"brain-specific BAF complex","type":"exact"},{"name":"brain-specific SWI/SNF complex","type":"exact"}],"termid":"GO:0140092"}


id: PBO:0011075
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LEPROTL1 ortholog","termid":"PBO:0011075"}


id: GO:1905811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synapse pruning","termid":"GO:1905807"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse pruning","termid":"GO:1905810"},{"relation_name":"negatively_regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of excitatory synapse pruning","synonyms":[{"name":"down regulation of excitatory synapse disassembly","type":"exact"},{"name":"down-regulation of excitatory synapse disassembly","type":"exact"},{"name":"downregulation of excitatory synapse disassembly","type":"exact"},{"name":"inhibition of excitatory synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905811"}


id: PBO:0042853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 65","termid":"PBO:0042853"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["VZ:3941","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: PBO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 199, Y-linked, pseudogene","termid":"PBO:0047179"}


id: GO:0004592
data:
  {"annotated_genes":["SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72276],"is_not":false,"summary":null,"term":"GO:0004592"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.","definition_xrefs":["EC:6.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pantoate-beta-alanine ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PANTOATE-BETA-ALANINE-LIG-RXN","RHEA:10912"],"synonyms":[{"name":"(R)-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"D-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"pantoate-activating enzyme activity","type":"related"},{"name":"pantoic-activating enzyme activity","type":"related"},{"name":"pantothenate synthetase activity","type":"related"}],"termid":"GO:0004592","terms_by_termid":{"GO:0004592":null}}


id: PATO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that pertains to the post-translational modification of a protein by the covalent attachment of one or more ubiquitin monomer.","definition_xrefs":["neurolex:http://neurolex.org/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinated","synonyms":[{"name":"Ubiquitylation","type":"related"}],"termid":"PATO:0002216"}


id: GO:0030292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Stops, prevents or reduces the activity of a protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase inhibitor activity","termid":"GO:0004860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004857","GO:0030234","GO:0140678","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"protein tyrosine kinase inhibitor activity","termid":"GO:0030292"}


id: PBO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.12.17","termid":"PBO:0003002"}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: _global:phosphorylates
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"_global:molecularly_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","secondary_identifiers":["RO:0002447"],"termid":"_global:phosphorylates"}


id: PBO:0045300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 2","termid":"PBO:0045300"}


id: PBO:0054292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1683","termid":"PBO:0054292"}


id: GO:0018676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4S)-limonene + H+ + NADPH + O2 = (4S)-perillyl alcohol + H2O + NADP+.","definition_xrefs":["EC:1.14.14.52","RHEA:23432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene monooxygenase activity","termid":"GO:0019113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(S)-limonene 7-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02470","MetaCyc:--LIMONENE-7-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0728"],"synonyms":[{"name":"(-)-limonene 7-monooxygenase activity","type":"exact"}],"termid":"GO:0018676"}


id: PBO:0042068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC137 pseudogene 1","termid":"PBO:0042068"}


id: PBO:0078075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 1 like 1","termid":"PBO:0078075"}


id: PBO:0091004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2 beta subunit","termid":"PBO:0091004"}


id: PBO:0068470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 47, pseudogene","termid":"PBO:0068470"}


id: PBO:0080932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAZ pseudogene 10","termid":"PBO:0080932"}


id: PBO:0014301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific repeat containing protein","termid":"PBO:0014301"}


id: GO:0061414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of a nonfermentable carbon source leads to an increase of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:dph","PMID:19686338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source","termid":"GO:0061414"}


id: PBO:0063030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAIP1 pseudogene 2","termid":"PBO:0063030"}


id: GO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate commitment","secondary_identifiers":["GO:0042055"],"synonyms":[{"name":"neuron lineage restriction","type":"exact"},{"name":"neuronal lineage restriction","type":"exact"}],"termid":"GO:0048663"}


id: PBO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad3","termid":"PBO:0001071"}


id: PBO:0072416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 21","termid":"PBO:0072416"}


id: PBO:0038836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 3","termid":"PBO:0038836"}


id: GO:0019788
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both X-NEDD8 and Y-NEDD8 are covalent linkages.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0016740","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"NEDD8 transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8951661","Reactome:R-HSA-8951648","Reactome:R-HSA-8952044","GO:0019945","Reactome:R-HSA-8952626","Reactome:R-HSA-8952638","Reactome:R-HSA-8952618","Reactome:R-HSA-8952631","Reactome:R-HSA-8956025","GO:0016976","GO:0042295","Reactome:R-HSA-8951764"],"synonyms":[{"name":"Hub1 conjugating enzyme activity","type":"related"},{"name":"NEDD8 conjugating enzyme activity","type":"related"},{"name":"RUB1 conjugating enzyme activity","type":"related"}],"termid":"GO:0019788","terms_by_termid":{"GO:0061654":null}}


id: GO:0070265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A type of cell death that is morphologically characterized by an increasingly translucent cytoplasm, swelling of organelles, minor ultrastructural modifications of the nucleus (specifically, dilatation of the nuclear membrane and condensation of chromatin into small, irregular, circumscribed patches) and increased cell volume (oncosis), culminating in the disruption of the plasma membrane and subsequent loss of intracellular contents. Necrotic cells do not fragment into discrete corpses as their apoptotic counterparts do. Moreover, their nuclei remain intact and can aggregate and accumulate in necrotic tissues.","definition_xrefs":["GOC:mtg_apoptosis","PMID:18846107","PMID:20823910"],"gene_count":0,"genotype_count":0,"name":"obsolete necrotic cell death (obsolete GO:0070265)","synonyms":[{"name":"cellular necrosis","type":"exact"},{"name":"necrosis","type":"broad"}],"termid":"GO:0070265"}


id: PBO:0089704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER fusion GTPase, atlastin Sey1","termid":"PBO:0089704"}


id: PBO:0077953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 11-1","termid":"PBO:0077953"}


id: PBO:0088886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphatase","termid":"PBO:0088886"}


id: PBO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 7","termid":"PBO:0043701"}


id: PBO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1688 family protein","termid":"PBO:0001209"}


id: PBO:0082682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome","termid":"PBO:0082682"}


id: PBO:0081044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C3HC-type containing 1","termid":"PBO:0081044"}


id: FYPO:0006843
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin is increased.","definition_xrefs":["PomBase:mah","PMID:28904333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3 localization to chromatin","synonyms":[{"name":"increased histone H3 localisation to chromatin","type":"exact"},{"name":"increased histone H3 localization to chromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3 localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006843"}


id: GO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of acid-sensing ion channel in another organism","termid":"GO:0044737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acid-sensing ion channel in another organism","synonyms":[{"name":"positive regulation of ASIC channel in other organism","type":"exact"},{"name":"positive regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044739"}


id: GO:1900826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"negative regulation of membrane depolarization","termid":"GO:1904180"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"down regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of membrane depolarization during of cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of membrane depolarization during cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1900826"}


id: PBO:0088227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L8/L2","termid":"PBO:0088227"}


id: PR:Q9HGN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein SET that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein C36B7.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.08c","secondary_identifiers":["UniProtKB:Q9HGN2"],"synonyms":[{"name":"Spom972h-SET","type":"exact"}],"termid":"PR:Q9HGN2"}


id: PBO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization dependent on F-actin","termid":"PBO:0003528"}


id: GO:0070342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of brown fat cells by cell division, resulting in the expansion of their population. A brown fat cell is a fat cell found the thermogenic form of adipose tissue found in newborns of many species.","definition_xrefs":["GOC:sl","CL:0000449","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brown fat cell proliferation","synonyms":[{"name":"brown adipocyte proliferation","type":"exact"},{"name":"brown adipose cell proliferation","type":"exact"}],"termid":"GO:0070342"}


id: PBO:0060809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFV2 antisense RNA 1","termid":"PBO:0060809"}


id: GO:0035032
data:
  {"annotated_genes":["SJAG_04552","SJAG_04860","SJAG_01236","SJAG_00114","SJAG_02699","SJAG_01876","SJAG_02289","SJAG_03403","SJAG_02665","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105291,83523,108777,78693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070772"},{"annotations":[71391,90232,106778,76272,75802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034271"},{"annotations":[71392,76273,75803,101099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"A phosphatidylinositol 3-kinase complex that contains a catalytic class III phosphoinositide 3-kinase (PI3K) subunit bound to a regulatory (adaptor) subunit. Additional adaptor proteins may be present. Class III PI3Ks have a substrate specificity restricted to phosphatidylinositol (PI).","definition_xrefs":["GOC:bf","PMID:9255069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex","termid":"GO:0005942"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00638":null,"SJAG_01236":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02665":null,"SJAG_02699":null,"SJAG_03403":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class III","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"class III PI3K complex","type":"exact"},{"name":"phosphoinositide 3-kinase complex, class III","type":"exact"}],"termid":"GO:0035032","terms_by_termid":{"GO:0034271":null,"GO:0034272":null,"GO:0070772":null}}


id: PBO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug68","termid":"PBO:0016933"}


id: PBO:0056978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29b-2","termid":"PBO:0056978"}


id: GO:0031475
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a dimer of class V myosin heavy chains and associated light chains; involved in intracellular transport. Myosin V is a dimeric molecule consisting of conserved motor domains followed by 6 IQ motifs which bind specific light chains and calmodulin. The tail domain is important for cellular localization and cargo binding and can be divided into an alpha-helical coiled coil region and a C-terminal globular region.","definition_xrefs":["Wikipedia:Myosin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"myosin V complex","termid":"GO:0031475"}


id: PBO:0002449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase Tpt1 (predicted)","termid":"PBO:0002449"}


id: PBO:0086482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative neutral trehalase, required for thermotolerance; may mediate resistance to other cellular stresses; NTH2 has a paralog, NTH1, that arose from the whole genome duplication","termid":"PBO:0086482"}


id: GO:0010354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a prenyl group from one compound (donor) to homogentisic acid.","definition_xrefs":["PMID:16989822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homogentisate prenyltransferase activity","termid":"GO:0010354"}


id: PBO:0064333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 3","termid":"PBO:0064333"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["EC:3.6.1.5","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","secondary_identifiers":["MetaCyc:RXN-14195","https://github.com/geneontology/go-ontology/issues/23454"],"termid":"GO:0102485"}


id: GO:0032621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-18 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-18 production","secondary_identifiers":["GO:0072616","GO:0042241"],"synonyms":[{"name":"IGIF production","type":"exact"},{"name":"IL-18 production","type":"exact"},{"name":"IL1F4 production","type":"narrow"},{"name":"interleukin-18 biosynthetic process","type":"narrow"},{"name":"interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032621"}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: PBO:0038967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADNP homeobox 2","termid":"PBO:0038967"}


id: GO:0103058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-L-rhamnose = kaempferol-3-glucoside-7-rhamnoside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"kaempferol 3-glucoside 7-O-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN1F-443"],"termid":"GO:0103058"}


id: PBO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 3","termid":"PBO:0046561"}


id: FYPO:0005098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal poly(A) polymerase activity","synonyms":[{"name":"abnormal PAP activity","type":"exact"},{"name":"abnormal polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"FYPO:0005098"}


id: FYPO:0001795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing purvalanol A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on purvalanol A","synonyms":[{"name":"normal cell population growth in presence of purvalanol A","type":"exact"},{"name":"normal cell population growth on purvalanol A","type":"exact"},{"name":"normal cellular response to purvalanol A","type":"related"},{"name":"normal vegetative cell population growth on purvalanol A","type":"exact"}],"termid":"FYPO:0001795"}


id: PBO:0072093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 24","termid":"PBO:0072093"}


id: GO:1903214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to mitochondrion.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein targeting","termid":"GO:1903533"},{"relation_name":"is_a","term_name":"regulation of establishment of protein localization to mitochondrion","termid":"GO:1903747"},{"relation_name":"regulates","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0008150","GO:0006605"],"is_obsolete":false,"name":"regulation of protein targeting to mitochondrion","synonyms":[{"name":"regulation of mitochondrial protein import","type":"related"},{"name":"regulation of mitochondrial translocation","type":"related"},{"name":"regulation of protein import into mitochondrion","type":"exact"},{"name":"regulation of protein targeting to mitochondria","type":"exact"},{"name":"regulation of protein-mitochondrial targeting","type":"exact"}],"termid":"GO:1903214"}


id: PBO:0028624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_assembly","termid":"PBO:0028624"}


id: PBO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1","termid":"PBO:0002142"}


id: FYPO:0007950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen stress.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased mating efficency during nitrogen stress","termid":"FYPO:0007950"}


id: PBO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 24","termid":"PBO:0072147"}


id: FYPO:0006052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of lipid droplets to the prospore membrane occurs to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PMID:28011631","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal lipid droplet localization to prospore membrane leading edge","synonyms":[{"name":"normal lipid droplet localization to FSM leading edge","type":"exact"},{"name":"normal lipid droplet localization to forespore membrane leading edge","type":"exact"},{"name":"normal lipid particle localization to prospore membrane leading edge","type":"exact"}],"termid":"FYPO:0006052"}


id: PBO:0045817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 7","termid":"PBO:0045817"}


id: PR:O94618
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim21 gene.","definition_xrefs":["UniProtKB:O94618","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.09","synonyms":[{"name":"Spom972h-tim21","type":"exact"}],"termid":"PR:O94618"}


id: GO:0090539
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102550],"is_not":false,"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone across a membrane and out of a cell.","definition_xrefs":["GOC:tb","GOC:vw","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone export","termid":"GO:0000770"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"peptide pheromone export by transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide pheromone export by membrane transport","type":"exact"}],"termid":"GO:0090539","terms_by_termid":{"GO:0090539":null}}


id: PBO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25 (predicted)","termid":"PBO:0005844"}


id: GO:0102471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6C-glucosyl-2-hydroxynaringenin = isovitexin-7-olate + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-hydroxynaringenin-6C-glucoside dehydratase activity","secondary_identifiers":["MetaCyc:RXN-14076"],"termid":"GO:0102471"}


id: PBO:0058946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 5","termid":"PBO:0058946"}


id: PBO:0028721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint","termid":"PBO:0028721"}


id: GO:0060765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of androgen receptor signaling pathway","synonyms":[{"name":"regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060765"}


id: PBO:0046993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member D","termid":"PBO:0046993"}


id: PR:O14287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.01 gene.","definition_xrefs":["UniProtKB:O14287","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.01","synonyms":[{"name":"Spom972h-SPAC9E9.01","type":"exact"}],"termid":"PR:O14287"}


id: PBO:0084432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; encoded within the complex locus MAL4","termid":"PBO:0084432"}


id: FYPO:0002570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular dNTP level","termid":"FYPO:0005752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dATP level","synonyms":[{"name":"increased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dATP level during vegetative growth","type":"exact"},{"name":"increased dATP accumulation","type":"related"}],"termid":"FYPO:0002570"}


id: PBO:0083544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps TRP1/YDR007W on opposite strand","termid":"PBO:0083544"}


id: GO:0097687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate antapex found in thecate species.","definition_xrefs":["GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate antapex","termid":"GO:0097684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapical horn","termid":"GO:0097687"}


id: GO:1901430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"positively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of syringal lignin biosynthetic process","synonyms":[{"name":"activation of S-lignin biosynthetic process","type":"exact"},{"name":"activation of syringal lignin anabolism","type":"exact"},{"name":"activation of syringal lignin biosynthesis","type":"exact"},{"name":"activation of syringal lignin biosynthetic process","type":"narrow"},{"name":"activation of syringal lignin formation","type":"exact"},{"name":"activation of syringal lignin synthesis","type":"exact"},{"name":"positive regulation of S-lignin biosynthetic process","type":"exact"},{"name":"positive regulation of syringal lignin anabolism","type":"exact"},{"name":"positive regulation of syringal lignin biosynthesis","type":"exact"},{"name":"positive regulation of syringal lignin formation","type":"exact"},{"name":"positive regulation of syringal lignin synthesis","type":"exact"},{"name":"up regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin anabolism","type":"exact"},{"name":"up regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up regulation of syringal lignin formation","type":"exact"},{"name":"up regulation of syringal lignin synthesis","type":"exact"},{"name":"up-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin anabolism","type":"exact"},{"name":"up-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"up-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"up-regulation of syringal lignin formation","type":"exact"},{"name":"up-regulation of syringal lignin synthesis","type":"exact"},{"name":"upregulation of S-lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin anabolism","type":"exact"},{"name":"upregulation of syringal lignin biosynthesis","type":"exact"},{"name":"upregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"upregulation of syringal lignin formation","type":"exact"},{"name":"upregulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901430"}


id: PBO:0003999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin CycC, Srb mediator subunit Srb11","termid":"PBO:0003999"}


id: GO:1903475
data:
  {"annotated_genes":["SJAG_03048","SJAG_01894","SJAG_00228","SJAG_03045","SJAG_00700","SJAG_01143","SJAG_04077","SJAG_03025","SJAG_04887","SJAG_00268","SJAG_04597","SJAG_04498","SJAG_00082","SJAG_04982","SJAG_04703","SJAG_03596","SJAG_02431","SJAG_02700","SJAG_02592","SJAG_00938","SJAG_00279","SJAG_01732","SJAG_03703","SJAG_04930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72462,84034,87965,88169,88216,90873,93197,93273,93472,94430,97877,98009,103483,107126,107549,112971,113529,113703,114563],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[76447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[97825],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90021,85718],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[114263],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring assembly that is involved in mitotic cytokinesis.","definition_xrefs":["GO_REF:0000060","GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"},{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","termid":"GO:1902407"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281","GO:0007010","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903475","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: FYPO:0007640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at ribosomal DNA during G0 phase.","definition_xrefs":["PomBase:mah","PMID:27738016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at rDNA during G0","synonyms":[{"name":"increased histone H3 K9 dimethylation at rDNA during G0","type":"exact"},{"name":"increased histone H3-K9 dimethylation at rDNA during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 dimethylation at rDNA during quiescence","type":"exact"},{"name":"increased histone H3-K9 dimethylation at ribosomal DNA during G0","type":"exact"},{"name":"increased histone H3K9 dimethylation at rDNA during G0","type":"exact"},{"name":"increased histone H3K9me2 dimethylation at rDNA during G0","type":"exact"}],"termid":"FYPO:0007640"}


id: GO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GDP-D-rhamnose metabolic process","synonyms":[{"name":"GDP-D-rhamnose metabolism","type":"exact"}],"termid":"GO:0046382"}


id: PBO:0064750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 86","termid":"PBO:0064750"}


id: GO:1905302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:pad","GOC:PARL","PMID:18691641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pinocytosis","termid":"GO:0048550"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"negatively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of macropinocytosis","synonyms":[{"name":"down regulation of macropinocytosis","type":"exact"},{"name":"down-regulation of macropinocytosis","type":"exact"},{"name":"downregulation of macropinocytosis","type":"exact"},{"name":"inhibition of macropinocytosis","type":"narrow"}],"termid":"GO:1905302"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0083741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the MIND kinetochore complex; joins kinetochore subunits contacting DNA to those contacting microtubules; critical to kinetochore assembly; complex consists of Mtw1p Including Nnf1p-Nsl1p-Dsn1p (MIND)","termid":"PBO:0083741"}


id: GO:0032101
data:
  {"annotated_genes":["SJAG_03048","SJAG_04268","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[70659,109057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to external stimulus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0032101","terms_by_termid":{"GO:0006808":null,"GO:1904547":null}}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01154","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: GO:0034071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + aminoglycoside = ADP + phosphoaminoglycoside.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"aminoglycoside phosphotransferase activity","secondary_identifiers":["EC:2.7.1.190"],"synonyms":[{"name":"aminoglycoside kinase activity","type":"exact"}],"termid":"GO:0034071"}


id: PBO:0039236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 1","termid":"PBO:0039236"}


id: PBO:0090625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv1","termid":"PBO:0090625"}


id: GO:0035861
data:
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