# terms

id: PBO:0030665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_5.8S_rRNA_level","termid":"PBO:0030665"}


id: PBO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit J (predicted)","termid":"PBO:0000744"}


id: PBO:0077697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tankyrase 1 binding protein 1","termid":"PBO:0077697"}


id: GO:0032378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"negatively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intracellular lipid transport","synonyms":[{"name":"down regulation of intracellular lipid transport","type":"exact"},{"name":"down-regulation of intracellular lipid transport","type":"exact"},{"name":"downregulation of intracellular lipid transport","type":"exact"},{"name":"inhibition of intracellular lipid transport","type":"narrow"}],"termid":"GO:0032378"}


id: PBO:0041078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRIX1 pseudogene 1","termid":"PBO:0041078"}


id: PBO:0073596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sedoheptulokinase","termid":"PBO:0073596"}


id: PBO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor Fep1","termid":"PBO:0000364"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["GOC:BHF","PMID:10966616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: FYPO:0009093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lysine and serine as the nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"increased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"increased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009093"}


id: PBO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q6, monooxygenase","termid":"PBO:0043661"}


id: GO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions that occur in living organisms that result in an increase in the mass (size) of a cell.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolic process resulting in cell growth (obsolete GO:0001557)","synonyms":[{"name":"metabolic process resulting in cell growth","type":"exact"}],"termid":"GO:0001557"}


id: FYPO:0004257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus and has a larger volume than normal.","definition_xrefs":["PomBase:mah","PMID:10503548"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"swollen multinucleate vegetative cell","synonyms":[{"name":"enlarged multinucleate cell","type":"related"},{"name":"large multinucleate cell","type":"related"},{"name":"multinucleate cell with increased cell size","type":"related"},{"name":"multinucleate cell with increased cell volume","type":"exact"},{"name":"swollen multinucleate cell during vegetative growth","type":"exact"},{"name":"swollen multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004257"}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:txnOH","GOC:rl","GOC:BHF","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: GO:1900597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"demethylkotanin metabolic process","synonyms":[{"name":"demethylkotanin metabolism","type":"exact"}],"termid":"GO:1900597"}


id: PBO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_manganese_depletion","termid":"PBO:0031089"}


id: PBO:0066778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 76","termid":"PBO:0066778"}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: SO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequencer read of a mitochondrial DNA sample.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_DNA","termid":"SO:0001032"},{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_DNA_read","synonyms":[{"name":"mitochondrial DNA read","type":"exact"}],"termid":"SO:0001929"}


id: PBO:0003102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Bms1 (predicted)","termid":"PBO:0003102"}


id: PBO:0073678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 1","termid":"PBO:0073678"}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: GO:1905706
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113093],"is_not":false,"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["GO_REF:0000058","PMID:12809520","PMID:15294286","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled proton transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905706","terms_by_termid":{"GO:1905706":null}}


id: PBO:0074856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 44","termid":"PBO:0074856"}


id: GO:0031132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + NADP+ = L-alpha-formylglycine + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.276","RHEA:21596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"serine 3-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R06126","Wikipedia:Serine_3-dehydrogenase","MetaCyc:RXN0-2201"],"synonyms":[{"name":"L-serine:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0031132"}


id: PBO:0064599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU2F1 divergent transcript","termid":"PBO:0064599"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["PMID:14569084","GOC:mtg_apoptosis","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptosis","type":"narrow"},{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: GO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-35-mediated signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-35-mediated signaling pathway","termid":"GO:0070757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-35-mediated signaling pathway","synonyms":[{"name":"regulation of IL-35-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-35-mediated signalling pathway","type":"exact"}],"termid":"GO:0070758"}


id: PBO:0051808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain 3 pseudogene 2","termid":"PBO:0051808"}


id: GO:1904180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane depolarization.","definition_xrefs":["PMID:20826763","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane depolarization","synonyms":[{"name":"down regulation of membrane depolarization","type":"exact"},{"name":"down-regulation of membrane depolarization","type":"exact"},{"name":"downregulation of membrane depolarization","type":"exact"},{"name":"inhibition of membrane depolarization","type":"narrow"}],"termid":"GO:1904180"}


id: PBO:0081195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein interacting with K protein 1 pseudogene 1","termid":"PBO:0081195"}


id: PBO:0017471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-encompasses","termid":"PBO:0017471"}


id: PBO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea2","termid":"PBO:0003057"}


id: GO:0035951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of oligopeptide transport by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oligopeptide transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035951)","synonyms":[{"name":"positive regulation of oligopeptide transport by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of oligopeptide transport by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035951"}


id: PBO:0017546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42 (predicted)","termid":"PBO:0017546"}


id: GO:0097381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane.","definition_xrefs":["GOC:krc","PMID:11826267","PMID:19501669","GOC:bj","GOC:pde","PMID:7507907","PMID:26574505","PMID:6771304","PMID:2537204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor disc membrane","termid":"GO:0097381"}


id: PR:O13919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A paired amphipathic helix protein Sin3b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.15","secondary_identifiers":["UniProtKB:O13919"],"synonyms":[{"name":"SIN3 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SIN3B","type":"exact"}],"termid":"PR:O13919"}


id: PBO:0063894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric immunoglobulin receptor","termid":"PBO:0063894"}


id: GO:1905529
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uracil import across plasma membrane.","definition_xrefs":["PMID:26536126","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"uracil import across plasma membrane","termid":"GO:0098721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of uracil import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905529","terms_by_termid":{"GO:1905530":null}}


id: PBO:0048220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase 1","termid":"PBO:0048220"}


id: GO:0031608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits forming the inner ring of the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex, beta-subunit complex (obsolete GO:0031608)","termid":"GO:0031608"}


id: PBO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0001189"}


id: PBO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily W member 1","termid":"PBO:0044419"}


id: GO:0015881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of creatine across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"creatine transmembrane transport","secondary_identifiers":["GO:1902598"],"synonyms":[{"name":"creatine transport","type":"broad"}],"termid":"GO:0015881"}


id: PBO:0046898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member E, pseudogene","termid":"PBO:0046898"}


id: PBO:0028898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_pear-shaped_vegetative_cell","termid":"PBO:0028898"}


id: PBO:0076741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 family, X-linked 1","termid":"PBO:0076741"}


id: GO:2001173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001173)","synonyms":[{"name":"regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001173"}


id: PBO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotate dehydrogenase Ura3","termid":"PBO:0000940"}


id: PBO:0048117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucose mutarotase","termid":"PBO:0048117"}


id: GO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of synaptic vesicle membrane (obsolete GO:0030285)","synonyms":[{"name":"integral to synaptic vesicle membrane","type":"narrow"}],"termid":"GO:0030285"}


id: PBO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 14","termid":"PBO:0070341"}


id: PBO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Sfr1-dependent","termid":"PBO:0003696"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: GO:0017076
data:
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id: GO:0032200
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  {"annotated_genes":["SJAG_02563","SJAG_02194","SJAG_03916","SJAG_02771","SJAG_03843","SJAG_01068","SJAG_03092","SJAG_01579","SJAG_01410","SJAG_01777","SJAG_06642","SJAG_04150","SJAG_00756","SJAG_04863","SJAG_00676","SJAG_01864","SJAG_03026","SJAG_02116","SJAG_01377","SJAG_04183","SJAG_03780","SJAG_01263","SJAG_00559","SJAG_04245","SJAG_06597","SJAG_03855","SJAG_00429","SJAG_04586","SJAG_02079","SJAG_01540","SJAG_03685","SJAG_00939","SJAG_01832","SJAG_02362","SJAG_00640","SJAG_05373","SJAG_01677","SJAG_02212","SJAG_04039","SJAG_01378","SJAG_05353","SJAG_05173","SJAG_05105","SJAG_05979","SJAG_03624","SJAG_03722","SJAG_00727","SJAG_02409","SJAG_03720","SJAG_01605","SJAG_04372","SJAG_00364","SJAG_02119","SJAG_05372"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85487,95212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902990"},{"annotations":[92750],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"},{"annotations":[85489,100496],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031848"},{"annotations":[75996],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[113871,112802,108895,86940,99531,92301,85775,84199],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031509"},{"annotations":[109809,95214,111106,75995,105659,87489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016233"},{"annotations":[77739,87093,104873,70613,103119,106792,104700,78102,71674,103385,111995,71067,94597,71706,94714,99591,107764,84870,96344,101343,111419,108062,85327,77060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000723"},{"annotations":[108173,91755,108175,108174,108176,106990,84918,108177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000722"},{"annotations":[106815,86340,103467,111108,95216,70926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"},{"annotations":[73805,69372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010833"},{"annotations":[95217,103468,111109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of telomeres, terminal regions of a linear chromosome that include the telomeric DNA repeats and associated proteins.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_00559":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00939":null,"SJAG_01068":null,"SJAG_01263":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01777":null,"SJAG_01832":null,"SJAG_01864":null,"SJAG_02079":null,"SJAG_02116":null,"SJAG_02119":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02362":null,"SJAG_02409":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03092":null,"SJAG_03624":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03855":null,"SJAG_03916":null,"SJAG_04039":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04586":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telomere organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"chromosome organization, telomeric","type":"exact"},{"name":"organization of chromosome, telomeric region","type":"exact"},{"name":"telomere organisation","type":"exact"},{"name":"telomere organization and biogenesis","type":"related"}],"termid":"GO:0032200","terms_by_termid":{"GO:0000722":null,"GO:0000723":null,"GO:0007004":null,"GO:0010833":null,"GO:0016233":null,"GO:0031509":null,"GO:0031848":null,"GO:0032210":null,"GO:0032215":null,"GO:1902990":null,"GO:1905324":null}}


id: PBO:0046357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 15","termid":"PBO:0046357"}


id: FYPO:0006187
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is normal (i.e. indistinguishable from wild type). Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","GO:1903475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring assembly","termid":"FYPO:0001368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of actomyosin contractile ring assembly","synonyms":[{"name":"normal rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"normal rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"normal rate of contractile ring assembly","type":"exact"},{"name":"normal rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"normal rate of mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0006187"}


id: PATO:0002383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively low.","direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased waxiness","termid":"PATO:0002383"}


id: PBO:0005449
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Wall Protein","termid":"PBO:0005449"}


id: PBO:0034681
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0034681"}


id: PBO:0050673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8","termid":"PBO:0050673"}


id: PR:Q10449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug157 gene.","definition_xrefs":["UniProtKB:Q10449","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 157 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.16c","synonyms":[{"name":"Spom972h-mug157","type":"exact"}],"termid":"PR:Q10449"}


id: GO:1903181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dopamine biosynthetic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:19703902","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of dopamine metabolic process","termid":"GO:0045964"},{"relation_name":"is_a","term_name":"regulation of dopamine biosynthetic process","termid":"GO:1903179"},{"relation_name":"positively_regulates","term_name":"dopamine biosynthetic process","termid":"GO:0042416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine biosynthetic process","synonyms":[{"name":"activation of dopamine anabolism","type":"narrow"},{"name":"activation of dopamine biosynthesis","type":"narrow"},{"name":"activation of dopamine biosynthetic process","type":"narrow"},{"name":"activation of dopamine formation","type":"narrow"},{"name":"activation of dopamine synthesis","type":"narrow"},{"name":"positive regulation of dopamine anabolism","type":"exact"},{"name":"positive regulation of dopamine biosynthesis","type":"exact"},{"name":"positive regulation of dopamine formation","type":"exact"},{"name":"positive regulation of dopamine synthesis","type":"exact"},{"name":"up regulation of dopamine anabolism","type":"exact"},{"name":"up regulation of dopamine biosynthesis","type":"exact"},{"name":"up regulation of dopamine biosynthetic process","type":"exact"},{"name":"up regulation of dopamine formation","type":"exact"},{"name":"up regulation of dopamine synthesis","type":"exact"},{"name":"up-regulation of dopamine anabolism","type":"exact"},{"name":"up-regulation of dopamine biosynthesis","type":"exact"},{"name":"up-regulation of dopamine biosynthetic process","type":"exact"},{"name":"up-regulation of dopamine formation","type":"exact"},{"name":"up-regulation of dopamine synthesis","type":"exact"},{"name":"upregulation of dopamine anabolism","type":"exact"},{"name":"upregulation of dopamine biosynthesis","type":"exact"},{"name":"upregulation of dopamine biosynthetic process","type":"exact"},{"name":"upregulation of dopamine formation","type":"exact"},{"name":"upregulation of dopamine synthesis","type":"exact"}],"termid":"GO:1903181"}


id: PBO:0061718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUTM2B antisense RNA 1","termid":"PBO:0061718"}


id: GO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of serotonin uptake","termid":"GO:0051612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of serotonin uptake","synonyms":[{"name":"inhibition of 5-HT uptake","type":"exact"},{"name":"inhibition of 5-hydroxytryptamine uptake","type":"exact"},{"name":"inhibition of 5HT uptake","type":"exact"},{"name":"inhibition of serotonin import","type":"exact"}],"termid":"GO:0051614"}


id: PBO:0070551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 17","termid":"PBO:0070551"}


id: PBO:0042091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 160","termid":"PBO:0042091"}


id: GO:0005937
data:
  {"annotated_genes":["SJAG_02351","SJAG_01978","SJAG_02486","SJAG_00663","SJAG_04509","SJAG_04982","SJAG_01888","SJAG_04470","SJAG_04001","SJAG_03646","SJAG_05001","SJAG_04723","SJAG_01732","SJAG_04100","SJAG_00938","SJAG_03688","SJAG_00870","SJAG_01794","SJAG_02700","SJAG_04703","SJAG_04901","SJAG_03011","SJAG_00677","SJAG_03453","SJAG_01769","SJAG_03596","SJAG_00700","SJAG_02169","SJAG_03444","SJAG_02718","SJAG_05285","SJAG_02379","SJAG_01215","SJAG_02989","SJAG_03145","SJAG_04781","SJAG_03357","SJAG_00667","SJAG_02228","SJAG_01943","SJAG_00514","SJAG_01993","SJAG_02222","SJAG_02924","SJAG_04887","SJAG_01171","SJAG_00185","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106622],"is_not":false,"summary":null,"term":"GO:0005937"},{"annotations":[84839,89444,103474,97410,86527,95634,106571,88138,90947,89639,103416,111339,109820,84053,95047,114663,97409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[94506,83919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[90108,95598,101395,111129],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[93465,70484,101487,110971,83675,76663,94424,73702,98677,88208,102228,113695,86414,109531,104174,102521,86372,104381,92428,72267,89101,93268],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[105493,91937],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The projection formed by unicellular fungi in response to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube","type":"narrow"},{"name":"shmoo","type":"narrow"}],"termid":"GO:0005937","terms_by_termid":{"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0047813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N2","termid":"PBO:0047813"}


id: GO:0007370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a ventral indentation (furrow) from the blastoderm epithelium, which is internalized to form a tube in the interior of the embryo, marking the start of gastrulation.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral furrow formation","termid":"GO:0007370"}


id: PBO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp3","termid":"PBO:0090035"}


id: GO:0004108
data:
  {"annotated_genes":["SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73934],"is_not":false,"summary":null,"term":"GO:0004108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA, where the acetyl group is added to the si-face of oxaloacetate; acetyl-CoA thus provides the two carbon atoms of the pro-S carboxymethyl group.","definition_xrefs":["EC:2.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate synthase activity","termid":"GO:0036440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"citrate (Si)-synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:CITSYN-RXN","Reactome:R-HSA-70975"],"synonyms":[{"name":"(R)-citric synthase activity","type":"related"},{"name":"acetyl-CoA:oxaloacetate C-acetyltransferase [thioester-hydrolysing, (pro-S)-carboxymethyl forming]","type":"related"},{"name":"citrate condensing enzyme activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO(-)->acetyl-CoA) activity","type":"related"},{"name":"citrate oxaloacetate-lyase ((pro-3S)-CH2COO-rightacetyl-CoA)","type":"related"},{"name":"citrate oxaloacetate-lyase [(pro-3S)-CH2COOrightacetyl-CoA]","type":"related"},{"name":"citrate oxaloacetate-lyase, CoA-acetylating activity","type":"related"},{"name":"citrate synthase activity","type":"broad"},{"name":"citrate synthetase activity","type":"related"},{"name":"citric synthase activity","type":"related"},{"name":"citric-condensing enzyme activity","type":"related"},{"name":"citrogenase activity","type":"related"},{"name":"condensing enzyme activity","type":"broad"},{"name":"oxalacetic transacetase activity","type":"related"},{"name":"oxaloacetate transacetase activity","type":"related"}],"termid":"GO:0004108","terms_by_termid":{"GO:0004108":null}}


id: GO:0046835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"carbohydrate phosphorylation","termid":"GO:0046835"}


id: GO:1901196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium-mediated signaling that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium-mediated signaling involved in cellular response to salt stress","synonyms":[{"name":"activation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"activation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"positive regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular response to salt stress","type":"exact"},{"name":"positive regulation of calcium-mediated signalling involved in cellular salinity response","type":"exact"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular response to salt stress","type":"narrow"},{"name":"stimulation of calcium-mediated signaling involved in cellular salinity response","type":"narrow"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"up-regulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular response to salt stress","type":"exact"},{"name":"upregulation of calcium-mediated signaling involved in cellular salinity response","type":"exact"}],"termid":"GO:1901196"}


id: GO:0090605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.","definition_xrefs":["GOC:di","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biofilm formation","termid":"GO:0042710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submerged biofilm formation","synonyms":[{"name":"solid substrate biofilm formation","type":"related"}],"termid":"GO:0090605"}


id: PBO:0074965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-7","termid":"PBO:0074965"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: FYPO:0007814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea","synonyms":[{"name":"increased rate of DNA replication elongation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to HU","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007814"}


id: PBO:0090379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit P","termid":"PBO:0090379"}


id: GO:0038057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor ligand superfamily member 11 (TNFSF11), a member of the tumor necrosis factor (TNF) cytokine family.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor binding","termid":"GO:0043120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TNFSF11 binding","synonyms":[{"name":"CD254 binding","type":"exact"},{"name":"ODF binding","type":"exact"},{"name":"OPGL binding","type":"exact"},{"name":"RANKL binding","type":"exact"},{"name":"TNF-related activation-induced cytokine binding","type":"exact"},{"name":"TRANCE binding","type":"exact"},{"name":"osteoclast differentiation factor binding","type":"exact"},{"name":"osteoprotegerin ligand binding","type":"exact"},{"name":"receptor activator of nuclear factor kappa-B ligand binding","type":"exact"},{"name":"tumor necrosis factor (ligand) superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor ligand superfamily member 11 binding","type":"exact"},{"name":"tumor necrosis factor superfamily member 11 binding","type":"exact"}],"termid":"GO:0038057"}


id: GO:0140236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the presynapse.","definition_xrefs":["PMID:27321671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translation at presynapse","termid":"GO:0140236"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: PBO:0036270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae DBR1","termid":"PBO:0036270"}


id: GO:1905398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD4-positive, alpha-beta T cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905398"}


id: GO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:vw","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"}


id: GO:2000075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of site selection that occurs as part of cytokinesis.","definition_xrefs":["GOC:obol","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, site selection","termid":"GO:2000073"},{"relation_name":"negatively_regulates","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinesis, site selection","synonyms":[{"name":"negative regulation of site selection involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:2000075"}


id: GO:0015729
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The directed movement of oxaloacetate, the anion of oxobutanedioic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oxaloacetate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015729","terms_by_termid":{"GO:1990555":null}}


id: GO:0032088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.","definition_xrefs":["GOC:tb","GOC:rl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of NF-kappaB transcription factor activity","synonyms":[{"name":"NF-kappaB inhibitor","type":"related"},{"name":"inhibition of NF-kappaB transcription factor","type":"exact"}],"termid":"GO:0032088"}


id: GO:0047758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanoate + ATP = 2-methylpropanoyl phosphate + ADP + H+.","definition_xrefs":["RHEA:24156","EC:2.7.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"ATP:2-methylpropanoate phosphotransferase activity","secondary_identifiers":["MetaCyc:BRANCHED-CHAIN-FATTY-ACID-KINASE-RXN","KEGG_REACTION:R04002"],"synonyms":[{"name":"ATP:2-methylpropanoate 1-phosphotransferase activity","type":"exact"},{"name":"ATP:2-methylpropanoate kinase activity","type":"exact"},{"name":"ATP:branched-chain-fatty-acid 1-phosphotransferase activity","type":"broad"},{"name":"ATP:isobutyrate 1-phosphotransferase activity","type":"exact"},{"name":"branched-chain fatty acid kinase activity","type":"broad"},{"name":"branched-chain-fatty-acid kinase activity","type":"broad"},{"name":"isobutyrate kinase activity","type":"broad"}],"termid":"GO:0047758"}


id: PBO:0064642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic progenitor cell differentiation and proliferation factor","termid":"PBO:0064642"}


id: GO:1901708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-3'-hydroxylarreatricin.","definition_xrefs":["PMID:12960376","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-3'-hydroxylarreatricin biosynthetic process","synonyms":[{"name":"(+)-3'-hydroxylarreatricin anabolism","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin biosynthesis","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin formation","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin synthesis","type":"exact"}],"termid":"GO:1901708"}


id: PBO:0046128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 2","termid":"PBO:0046128"}


id: PBO:0079564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 2","termid":"PBO:0079564"}


id: PBO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 10","termid":"PBO:0070857"}


id: PBO:0018128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Bis1","termid":"PBO:0018128"}


id: RO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities in which the processes executed by the two entities are causally connected.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with","synonyms":[{"name":"in pairwise interaction with","type":"exact"}],"termid":"RO:0002434"}


id: PR:P78831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.14","synonyms":[{"name":"Spom972h-ght5","type":"exact"},{"name":"hexose transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78831"}


id: GO:0061065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dauer larval development, the process whose specific outcome is the progression of the dauer larva over time, through the facultative diapause of the dauer (enduring) larval stage, with specialized traits adapted for dispersal and long-term survival, with elevated stress resistance and without feeding.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"regulates","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dauer larval development","termid":"GO:0061065"}


id: PBO:0031337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenic","termid":"PBO:0031337"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:inorganic phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycerone phosphate:inorganic phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: GO:0021558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trochlear nerve over time, from its formation to the mature structure. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve development","synonyms":[{"name":"CN IV development","type":"related"},{"name":"cranial nerve 4 development","type":"exact"},{"name":"cranial nerve IV development","type":"exact"}],"termid":"GO:0021558"}


id: FYECO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited glucose","termid":"FYECO:0000210"}


id: GO:0097327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antineoplastic agent stimulus. An antineoplastic agent is a substance that inhibits or prevents the proliferation of neoplasms.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antineoplastic agent","termid":"GO:0097327"}


id: PBO:0070150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 64 pseudogene","termid":"PBO:0070150"}


id: PR:000027523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the yeast SLD2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:11937031","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2","pombase_gene_id":"SPAC6B12.11","synonyms":[{"name":"DNA replication and checkpoint protein 1","type":"exact"},{"name":"DRC1","type":"related"},{"name":"SLD2","type":"exact"}],"termid":"PR:000027523"}


id: GO:0048003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses lipid antigen in association with an MHC class Ib protein complex on its cell surface, including lipid extraction, degradation, and transport steps for the lipid antigen both prior to and following assembly with the MHC protein complex. The lipid antigen may originate from an endogenous or exogenous source of lipid. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family.","definition_xrefs":["GOC:add","PMID:15928678","PMID:15928680","PMID:10375559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"antigen presentation, lipid antigen","type":"exact"},{"name":"lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0048003"}


id: PBO:0066786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 85","termid":"PBO:0066786"}


id: PBO:0017913
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mcm2, Mcm4, and Mcm7 associate with chromatin simultaneously","termid":"PBO:0017913"}


id: PBO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diablo IAP-binding mitochondrial protein","termid":"PBO:0044992"}


id: PBO:0054261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1646","termid":"PBO:0054261"}


id: PBO:0086145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal mitochondrial morphology; has similarity to hemolysins","termid":"PBO:0086145"}


id: GO:0008332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a low voltage-gated channel. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","PMID:16382099","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low voltage-gated calcium channel activity","synonyms":[{"name":"T-type calcium channel","type":"related"},{"name":"low voltage gated calcium channel activity","type":"exact"},{"name":"low voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008332"}


id: GO:1902097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in defense response to Gram-negative bacterium.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:17183709"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium (obsolete GO:1902097)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"activation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"activation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"narrow"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"related"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in Gram-negative antibacterial peptide activity","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defence response to Gram-negative bacterium","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacteria","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium","type":"exact"}],"termid":"GO:1902097"}


id: PBO:0072670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 3","termid":"PBO:0072670"}


id: PBO:0066104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1B","termid":"PBO:0066104"}


id: PBO:0045909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB6 antisense RNA 1","termid":"PBO:0045909"}


id: GO:0031306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial outer membrane (obsolete GO:0031306)","synonyms":[{"name":"intrinsic to mitochondrial outer membrane","type":"narrow"}],"termid":"GO:0031306"}


id: FYECO:0000274
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with adenine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, adenine nitrogen source","termid":"FYECO:0000274"}


id: PBO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored protein (predicted)","termid":"PBO:0000064"}


id: PBO:0027838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cortical_microtubule_cytoskeleton","termid":"PBO:0027838"}


id: PBO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLCCI1 divergent transcript","termid":"PBO:0048675"}


id: PBO:0076868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 14B, pseudogene","termid":"PBO:0076868"}


id: PBO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transporter inducer Gti1","termid":"PBO:0000318"}


id: GO:0016274
data:
  {"annotated_genes":["SJAG_03548","SJAG_02756","SJAG_00596","SJAG_02271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[78873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[107897,95911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (protein)-arginine = S-adenosyl-L-homocysteine + (protein)-N-methyl-arginine.","definition_xrefs":["GOC:mah","PMID:31284549","PMID:12351636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methyltransferase activity","termid":"GO:0008276"},{"relation_name":"is_a","term_name":"arginine N-methyltransferase activity","termid":"GO:0016273"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_02271":null,"SJAG_02756":null,"SJAG_03548":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016741","GO:0016740","GO:0008276","GO:0003674"],"is_obsolete":false,"name":"protein-arginine N-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-8879123","Reactome:R-HSA-5205824","Reactome:R-HSA-5229203","Reactome:R-HSA-8934735","Reactome:R-HSA-5205867","Reactome:R-HSA-5205798","Reactome:R-HSA-5218952","Reactome:R-HSA-191790","Reactome:R-HSA-5205820","Reactome:R-HSA-5205822","Reactome:R-HSA-5661126","Reactome:R-HSA-5229010"],"synonyms":[{"name":"PRMT activity","type":"exact"}],"termid":"GO:0016274","terms_by_termid":{"GO:0008469":null,"GO:0019702":null,"GO:0035242":null}}


id: PBO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology","termid":"PBO:0031548"}


id: FYPO:0001986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 5-fluorouracil than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to 5-fluorouracil","synonyms":[{"name":"resistance to 5-FU","type":"exact"},{"name":"resistance to 5-fluorouracil during mitotic cell cycle","type":"related"},{"name":"resistance to 5-fluorouracil during vegetative growth","type":"exact"},{"name":"resistant to 5-fluorouracil","type":"exact"}],"termid":"FYPO:0001986"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: PBO:0041850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1","termid":"PBO:0041850"}


id: GO:0010090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tair_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"part_of","term_name":"plant epidermis morphogenesis","termid":"GO:0090626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome morphogenesis","secondary_identifiers":["GO:0048272"],"synonyms":[{"name":"trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010090"}


id: PBO:0078708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-3","termid":"PBO:0078708"}


id: PBO:0079426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 9","termid":"PBO:0079426"}


id: GO:1905061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardioblast proliferation.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:TermGenie","PMID:24236097","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000137"},{"relation_name":"negatively_regulates","term_name":"cardioblast proliferation","termid":"GO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast proliferation","synonyms":[{"name":"down regulation of cardioblast proliferation","type":"exact"},{"name":"down-regulation of cardioblast proliferation","type":"exact"},{"name":"downregulation of cardioblast proliferation","type":"exact"},{"name":"inhibition of cardioblast proliferation","type":"narrow"}],"termid":"GO:1905061"}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: PBO:0056605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDN1 antisense RNA 1","termid":"PBO:0056605"}


id: PBO:0038888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 1","termid":"PBO:0038888"}


id: PR:000027605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrc1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1","synonyms":[{"name":"DNA replication checkpoint mediator mrc1","type":"exact"},{"name":"mrc1","type":"exact"}],"termid":"PR:000027605"}


id: GO:0033188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phosphocholine + ceramide = 1,2-diacyl-sn-glycerol + sphingomyelin.","definition_xrefs":["RHEA:18765","EC:2.7.8.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sphingomyelin synthase activity","secondary_identifiers":["KEGG_REACTION:R08969","MetaCyc:2.7.8.27-RXN","Reactome:R-HSA-429786","Reactome:R-HSA-429798"],"synonyms":[{"name":"SM synthase activity","type":"related"},{"name":"SMS1","type":"related"},{"name":"SMS2","type":"related"},{"name":"ceramide:phosphatidylcholine cholinephosphotransferase activity","type":"related"},{"name":"phosphatidylcholine:ceramide cholinephosphotransferase activity","type":"related"}],"termid":"GO:0033188"}


id: PBO:0067542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 688, pseudogene","termid":"PBO:0067542"}


id: GO:0038111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-7 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-7","termid":"GO:0098761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-7-mediated signaling pathway","synonyms":[{"name":"IL-7-mediated signaling pathway","type":"exact"},{"name":"interleukin-7-mediated signalling pathway","type":"exact"}],"termid":"GO:0038111"}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: GO:1901714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urea catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide catabolic process","termid":"GO:0034253"},{"relation_name":"is_a","term_name":"regulation of urea catabolic process","termid":"GO:0034254"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen cycle metabolic process","termid":"GO:1903316"},{"relation_name":"positively_regulates","term_name":"urea catabolic process","termid":"GO:0043419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0071941"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071941"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0071941","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of urea catabolic process","synonyms":[{"name":"activation of urea breakdown","type":"exact"},{"name":"activation of urea catabolic process","type":"narrow"},{"name":"activation of urea catabolism","type":"exact"},{"name":"activation of urea decomposition","type":"exact"},{"name":"activation of urea degradation","type":"exact"},{"name":"positive regulation of urea breakdown","type":"exact"},{"name":"positive regulation of urea catabolism","type":"exact"},{"name":"positive regulation of urea decomposition","type":"exact"},{"name":"positive regulation of urea degradation","type":"exact"},{"name":"up regulation of urea breakdown","type":"exact"},{"name":"up regulation of urea catabolic process","type":"exact"},{"name":"up regulation of urea catabolism","type":"exact"},{"name":"up regulation of urea decomposition","type":"exact"},{"name":"up regulation of urea degradation","type":"exact"},{"name":"up-regulation of urea breakdown","type":"exact"},{"name":"up-regulation of urea catabolic process","type":"exact"},{"name":"up-regulation of urea catabolism","type":"exact"},{"name":"up-regulation of urea decomposition","type":"exact"},{"name":"up-regulation of urea degradation","type":"exact"},{"name":"upregulation of urea breakdown","type":"exact"},{"name":"upregulation of urea catabolic process","type":"exact"},{"name":"upregulation of urea catabolism","type":"exact"},{"name":"upregulation of urea decomposition","type":"exact"},{"name":"upregulation of urea degradation","type":"exact"}],"termid":"GO:1901714"}


id: GO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell proliferation","termid":"GO:0002053"},{"relation_name":"is_a","term_name":"regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090095"},{"relation_name":"is_a","term_name":"positive regulation of kidney development","termid":"GO:0090184"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"metanephric cap mesenchymal cell proliferation involved in metanephros development","termid":"GO:0090094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090096"}


id: PBO:0080592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 19","termid":"PBO:0080592"}


id: PBO:0071209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 50","termid":"PBO:0071209"}


id: GO:0070531
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, RAP80/UIMC1, BRCC3/BRCC36, BRE/BRCC45, FAM175A/CCDC98/Abraxas and MERIT40/NBA1, and specifically recognizes and binds K63-linked polyubiquitin chains present on histone H2A and H2AX at DNA damage sites.","definition_xrefs":["GOC:mah","PMID:19261749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA1-A complex","termid":"GO:0070531"}


id: PBO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C6","termid":"PBO:0045213"}


id: GO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate or extent of exocyst assembly.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocyst assembly","termid":"GO:0001928"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"negatively_regulates","term_name":"exocyst assembly","termid":"GO:0001927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0065003","GO:0016192","GO:0140056","GO:0044085"],"is_obsolete":false,"name":"negative regulation of exocyst assembly","synonyms":[{"name":"down regulation of exocyst assembly","type":"exact"},{"name":"down-regulation of exocyst assembly","type":"exact"},{"name":"downregulation of exocyst assembly","type":"exact"},{"name":"inhibition of exocyst assembly","type":"narrow"}],"termid":"GO:0001929"}


id: GO:0008137
data:
  {"annotated_genes":["SJAG_04152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108091],"is_not":false,"summary":null,"term":"GO:0008137"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + ubiquinone + 5 H+(in) = NAD+ + ubiquinol + 4 H+(out).","definition_xrefs":["RHEA:29091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"NADH dehydrogenase (quinone) activity","termid":"GO:0050136"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0022857","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"NADH dehydrogenase (ubiquinone) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:NADH-DEHYDROG-A-RXN","EC:7.1.1.2","Reactome:R-HSA-163217"],"synonyms":[{"name":"DPNH-coenzyme Q reductase activity","type":"related"},{"name":"DPNH-ubiquinone reductase activity","type":"related"},{"name":"NADH coenzyme Q1 reductase activity","type":"related"},{"name":"NADH-CoQ oxidoreductase activity","type":"related"},{"name":"NADH-CoQ reductase activity","type":"related"},{"name":"NADH-Q6 oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q oxidoreductase activity","type":"related"},{"name":"NADH-coenzyme Q reductase activity","type":"related"},{"name":"NADH-ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH-ubiquinone reductase activity","type":"related"},{"name":"NADH-ubiquinone-1 reductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase activity","type":"related"},{"name":"NADH:ubiquinone oxidoreductase complex activity","type":"related"},{"name":"coenzyme Q reductase activity","type":"related"},{"name":"complex 1 dehydrogenase activity","type":"related"},{"name":"complex I (NADH:Q1 oxidoreductase) activity","type":"related"},{"name":"complex I (electron transport chain) activity","type":"related"},{"name":"complex I (mitochondrial electron transport) activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"electron transfer complex I activity","type":"related"},{"name":"mitochondrial electron transport complex 1 activity","type":"narrow"},{"name":"mitochondrial electron transport complex I activity","type":"narrow"},{"name":"reduced nicotinamide adenine dinucleotide-coenzyme Q reductase activity","type":"related"},{"name":"type 1 dehydrogenase activity","type":"related"},{"name":"ubiquinone reductase activity","type":"exact"}],"termid":"GO:0008137","terms_by_termid":{"GO:0008137":null}}


id: PBO:0067700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 8","termid":"PBO:0067700"}


id: PBO:0053579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 602","termid":"PBO:0053579"}


id: PATO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique to","termid":"PATO:0002513"}


id: PBO:0061011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicolin 1, tubulin polyglutamylase complex subunit","termid":"PBO:0061011"}


id: PBO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23 (predicted)","termid":"PBO:0001360"}


id: FYPO:0005000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during interphase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic interphase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic interphase","type":"exact"},{"name":"protein mislocalised to nucleus during interphase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic interphase","type":"exact"},{"name":"protein mislocalized to nucleus during interphase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during interphase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005000"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["PMID:9550716","ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: GO:0043704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate specification","termid":"GO:0043704"}


id: PBO:0080915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 4","termid":"PBO:0080915"}


id: PBO:0003332
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CocKayNe syndrome 1","termid":"PBO:0003332"}


id: FYPO:0004711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more translation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Translation RNAs are transcribed from genes whose products are involved in translation.","definition_xrefs":["PomBase:mah","PMID:18203864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of translation gene mRNA during vegetative growth","termid":"FYPO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of translation gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of translation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of translation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of translation gene transcripts during vegetative growth","type":"exact"},{"name":"decreased translation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of translation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004711"}


id: PBO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Vps71","termid":"PBO:0003878"}


id: PBO:0027658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0027658"}


id: PBO:0027509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_chromosome_condensation","termid":"PBO:0027509"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: PBO:0003208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication licensing factor Cdt1","termid":"PBO:0003208"}


id: RO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of immediately downstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_adjacent_to","termid":"RO:0002515"},{"relation_name":"is_a","term_name":"is_upstream_of_sequence_of","termid":"RO:0002528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_immediately_upstream_of_sequence_of","termid":"RO:0002531"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: GO:0021934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell in the hindbrain in which cells move orthogonal to the direction of radial migration.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain tangential cell migration","synonyms":[{"name":"hindbrain neurophilic migration","type":"related"}],"termid":"GO:0021934"}


id: PBO:0046962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 1","termid":"PBO:0046962"}


id: GO:0005384
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850","SJAG_04867","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73315,75026],"is_not":false,"summary":null,"term":"GO:0005384"},{"annotations":[103998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[86872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of manganese (Mn) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"manganese ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RHEA:28699","Reactome:R-HSA-8959798"],"termid":"GO:0005384","terms_by_termid":{"GO:0005384":null,"GO:0010486":null,"GO:0015410":null}}


id: PBO:0075689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid 5 alpha-reductase 1","termid":"PBO:0075689"}


id: GO:0048142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The four rounds of incomplete mitosis undergone by a cystoblast to form a 16-cell cyst of interconnected cells within a germarium. Within the cyst, one cell differentiates into an oocyte while the rest become nurse cells. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","PMID:11131529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystoblast division","termid":"GO:0007282"},{"relation_name":"part_of","term_name":"germarium-derived female germ-line cyst formation","termid":"GO:0030727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived cystoblast division","synonyms":[{"name":"germarium-derived cystoblast cell division","type":"exact"}],"termid":"GO:0048142"}


id: PBO:0066136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retina and anterior neural fold homeobox","termid":"PBO:0066136"}


id: FYPO:0003995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000654","FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000294","FYPO:0000002","FYPO:0000707"],"is_obsolete":false,"name":"abnormal DNA primase activity","termid":"FYPO:0003995"}


id: GO:0032997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a subunit or subunits capable of binding the Fc portion of an immunoglobulin with additional signaling components. The complex functions as a receptor for immunoglobulin.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Fc receptor complex","synonyms":[{"name":"Fc-receptor complex","type":"exact"},{"name":"FcR complex","type":"exact"},{"name":"immunoglobulin receptor complex","type":"broad"}],"termid":"GO:0032997"}


id: FYPO:0005348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement is abnormal. SPB-led chromosome movement is a microtubule-based process in which chromosomes migrate as a result of rapid spindle pole body (SPB) and centrosome oscillations during mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abnormal SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"abnormal maintenance of SPB localization","type":"related"},{"name":"abnormal maintenance of mitotic spindle pole body localization","type":"related"},{"name":"abnormal mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abnormal mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abnormal spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"increased spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005348"}


id: PBO:0079974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 12","termid":"PBO:0079974"}


id: PBO:0070923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 31","termid":"PBO:0070923"}


id: PBO:0080719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WSC domain containing 1","termid":"PBO:0080719"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: FYPO:0006820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate of cell growth is abnormal. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell growth","termid":"FYPO:0002862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell growth rate","termid":"FYPO:0006820"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: FYPO:0007067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular stress response to zinc ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered protein level during stress response to zinc ion","termid":"FYPO:0007051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during stress response to zinc ion","synonyms":[{"name":"decreased protein accumulation during stress response to zinc ion","type":"related"},{"name":"decreased protein level during cellular response to excess zinc","type":"exact"},{"name":"decreased protein level during cellular response to high zinc level","type":"exact"},{"name":"decreased protein level during cellular response to replete zinc","type":"related"},{"name":"decreased protein level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased protein level during response to zinc ion stress","type":"exact"},{"name":"decreased protein level during response to zinc toxicity","type":"related"},{"name":"decreased protein level during stress response to zinc","type":"exact"},{"name":"decreased protein level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"reduced protein level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007067"}


id: PBO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphobilinogen synthase Hem2 (predicted)","termid":"PBO:0001725"}


id: GO:0019775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both X-FAT10 and Y-FAT10 are covalent linkages.","definition_xrefs":["GOC:mah","PMID:12826404","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0016746","GO:0019787","GO:0003674"],"is_obsolete":false,"name":"FAT10 transferase activity","synonyms":[{"name":"FAT10 conjugating enzyme activity","type":"narrow"}],"termid":"GO:0019775"}


id: PBO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase Met6","termid":"PBO:0004809"}


id: MOD:01353
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:141#K","PubMed:12643539","PubMed:6273432","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidination of lysines or N-terminal amines with methyl acetimidate","termid":"MOD:00509"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidination of lysines or N-terminal amines with methyl acetimidate - site K","synonyms":[{"name":"Amidine","type":"related"},{"name":"amidination of lysines or N-terminal amines with methyl acetimidate","type":"related"}],"termid":"MOD:01353"}


id: GO:0009677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Rudimentary double fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the ventral canal cell nucleus to form a second zygote, which soon degenerates. An example of this process is found in the Gnetophytes, such as Welwitschia mirabilis.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double fertilization forming two zygotes","termid":"GO:0009677"}


id: PBO:0043142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 10","termid":"PBO:0043142"}


id: GO:0007623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process in an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian rhythm","secondary_identifiers":["Wikipedia:Circadian_rhythm","GO:0050895"],"synonyms":[{"name":"circadian process","type":"exact"},{"name":"circadian response","type":"related"},{"name":"response to circadian rhythm","type":"related"}],"termid":"GO:0007623"}


id: PBO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein","termid":"PBO:0001573"}


id: GO:0060872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semicircular canal development","termid":"GO:0060872"}


id: GO:0018306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"},{"relation_name":"is_a","term_name":"iron incorporation into metallo-sulfur cluster","termid":"GO:0018283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018306"}


id: PBO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.7","termid":"PBO:0000444"}


id: GO:0016553
data:
  {"annotated_genes":["SJAG_04380","SJAG_04189","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99384,99666,96600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002100"}]},"cv_name":"biological_process","definition":"Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s).","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"base conversion or substitution editing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"base conversion/substitution editing","type":"exact"}],"termid":"GO:0016553","terms_by_termid":{"GO:0002100":null}}


id: GO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the quantity of fibrinogen circulating in the bloodstream.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA","PMID:20570858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circulating fibrinogen levels","termid":"GO:0044537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circulating fibrinogen levels","termid":"GO:0061754"}


id: FYECO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfate (Na2SO4) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2SO4","synonyms":[{"name":"sodium sulfate added","type":"exact"}],"termid":"FYECO:0000205"}


id: GO:0061168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hair follicle placode formation","termid":"GO:0061168"}


id: GO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methyleneglutarate = 2-methylene-3-methylsuccinate.","definition_xrefs":["EC:5.4.99.4","RHEA:13793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2-methyleneglutarate mutase activity","secondary_identifiers":["MetaCyc:2-METHYLENEGLUTARATE-MUTASE-RXN","KEGG_REACTION:R03908"],"synonyms":[{"name":"alpha-methyleneglutarate mutase activity","type":"related"},{"name":"2-methyleneglutarate carboxy-methylenemethylmutase activity","type":"related"}],"termid":"GO:0047548"}


id: PBO:0067945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 247","termid":"PBO:0067945"}


id: PR:Q9UT85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 26 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00669","PANTHER:PTHR22838:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C343.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.04c","secondary_identifiers":["UniProtKB:Q9UT85"],"synonyms":[{"name":"Spom972h-WDR26","type":"exact"}],"termid":"PR:Q9UT85"}


id: GO:0002680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lymphoid progenitor cell becomes committed to becoming a pro-T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell lineage commitment","synonyms":[{"name":"pro-T cell fate commitment","type":"exact"},{"name":"pro-T lymphocyte fate commitment","type":"exact"},{"name":"pro-T lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002680"}


id: PBO:0058640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6770-2","termid":"PBO:0058640"}


id: SO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification, whereby the histone protein is acylated at multiple sites in a region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_modification","termid":"SO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_acylation_region","synonyms":[{"name":"histone acylation region","type":"related"}],"termid":"SO:0001737"}


id: GO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of pre-rRNAs originally produced as a bicistronic rRNA transcript that contains the SSU-rRNA and the LSU-rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with two genes in this order are produced in Archaeal species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)","termid":"GO:0000450"}


id: PBO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex BRCT domain subunit Cfr1","termid":"PBO:0036315"}


id: FYPO:0001588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during nitrogen starvation","termid":"FYPO:0001652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased lysine import during nitrogen starvation","synonyms":[{"name":"decreased L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-lysine import during nitrogen starvation","type":"exact"},{"name":"decreased lysine import during nitrogen depletion","type":"exact"},{"name":"decreased lysine import during nitrogen deprivation","type":"exact"},{"name":"decreased lysine import into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine uptake during nitrogen starvation","type":"exact"},{"name":"reduced lysine import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001588"}


id: FYPO:0004076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated, has more than one septum, and undergoes one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, elongated cell","termid":"FYPO:0002724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0000032","FYPO:0001985","FYPO:0000005","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, elongated multiseptate cell","synonyms":[{"name":"inviable following spore germination, single or double cell division, elongated multiseptate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, elongated multiseptate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, elongated multiseptate cell","type":"exact"}],"termid":"FYPO:0004076"}


id: PBO:0038405
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of_or_within,_positive_effect","termid":"PBO:0038405"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112627],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0057861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3171 host gene","termid":"PBO:0057861"}


id: FYPO:0005489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the vacuolar membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to vacuole","termid":"FYPO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to vacuolar membrane","synonyms":[{"name":"ectopic protein localization to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane","type":"exact"},{"name":"protein mislocalised to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to vacuolar membrane during vegetative growth","type":"exact"},{"name":"protein mislocalized to vacuole membrane","type":"exact"}],"termid":"FYPO:0005489"}


id: PBO:0054439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1836","termid":"PBO:0054439"}


id: PBO:0085079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes; promotes nucleosome shifts in the 3 prime direction","termid":"PBO:0085079"}


id: GO:0060324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a face from an initial condition to its mature state. The face is the ventral division of the head.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"face development","termid":"GO:0060324"}


id: GO:0046404
data:
  {"annotated_genes":["SJAG_01979","SJAG_02680"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70799,83912],"is_not":false,"summary":null,"term":"GO:0046404"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA.","definition_xrefs":["RHEA:15669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051734"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01979":null,"SJAG_02680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R03840","MetaCyc:POLYNUCLEOTIDE-5-HYDROXYL-KINASE-RXN"],"synonyms":[{"name":"ATP-dependent DNA kinase activity","type":"exact"},{"name":"polydeoxyribonucleotide 5'-hydroxyl-kinase activity","type":"broad"}],"termid":"GO:0046404","terms_by_termid":{"GO:0046404":null}}


id: PBO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5 (predicted)","termid":"PBO:0002079"}


id: GO:0035227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"}


id: GO:1905648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shell calcification.","definition_xrefs":["GO_REF:0000058","PMID:14648763","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"shell calcification","termid":"GO:0031215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shell calcification","termid":"GO:1905648"}


id: PBO:0073744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3","termid":"PBO:0073744"}


id: PBO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 8","termid":"PBO:0047481"}


id: GO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"cellular modified histidine catabolic process","termid":"GO:0052702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"ergothioneine catabolic process","synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine breakdown","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine degradation","type":"exact"},{"name":"ergothioneine breakdown","type":"exact"},{"name":"ergothioneine catabolism","type":"exact"},{"name":"ergothioneine degradation","type":"exact"}],"termid":"GO:0052700"}


id: GO:1902399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in G1 DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G1 DNA damage checkpoint (obsolete GO:1902399)","synonyms":[{"name":"detection of stimulus involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"perception of stimulus involved in G1 DNA damage checkpoint","type":"related"},{"name":"perception of stimulus involved in G1/S DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in G1 DNA damage checkpoint","type":"exact"},{"name":"stimulus detection involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in G1 DNA damage checkpoint","type":"related"},{"name":"stimulus sensing involved in G1/S DNA damage checkpoint","type":"related"}],"termid":"GO:1902399"}


id: PBO:0065947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9 checkpoint clamp component A","termid":"PBO:0065947"}


id: PBO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil","termid":"PBO:0000288"}


id: PR:O74545
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase C777.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.06c","synonyms":[{"name":"Spom972h-SPCC777.06c","type":"exact"}],"termid":"PR:O74545"}


id: PBO:0027181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_maintenance_involved_in_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0027181"}


id: GO:1901835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:1901834"},{"relation_name":"positively_regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"activation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"activation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"narrow"},{"name":"activation of deadenylylation-independent decapping","type":"exact"},{"name":"positive regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"positive regulation of deadenylylation-independent decapping","type":"exact"},{"name":"up regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"up regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"up regulation of deadenylylation-independent decapping","type":"exact"},{"name":"up-regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"up-regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"up-regulation of deadenylylation-independent decapping","type":"exact"},{"name":"upregulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"upregulation of deadenylation-independent decapping of nuclear-transcribed mRNA","type":"exact"},{"name":"upregulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901835"}


id: GO:0018744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: limonene-1,2-epoxide + H2O = limonene-1,2-diol. Other substrates include alicyclic and 1-methyl-substituted epoxides, such as 1-methylcyclohexene oxide, indene oxide and cyclohexene oxide.","definition_xrefs":["EC:3.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"limonene-1,2-epoxide hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r0734","MetaCyc:3.3.2.8-RXN","RHEA:10700"],"synonyms":[{"name":"limonene oxide hydrolase activity","type":"related"}],"termid":"GO:0018744"}


id: GO:0097443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.","definition_xrefs":["NIF_Subcellular:sao1028571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"sorting endosome","synonyms":[{"name":"MVB-tubule complex","type":"related"}],"termid":"GO:0097443"}


id: PBO:0013051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fhl1","termid":"PBO:0013051"}


id: PATO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete borderline intensity (obsolete PATO:0002528)","termid":"PATO:0002528"}


id: PBO:0031004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_dodecyl_sulfate","termid":"PBO:0031004"}


id: _global:negatively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of,_negative_effect","termid":"_global:causally_upstream_of,_negative_effect"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_regulates","secondary_identifiers":["RO:0002212"],"termid":"_global:negatively_regulates"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: GO:0061657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of UFM1 from one protein to another via the reaction X-UFM1 + Y = Y-UFM1 + X, where both the X-UFM1 and Y-UFM1 linkages are thioester bonds between the C-terminal amino acid of UFM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"},{"relation_name":"is_a","term_name":"UFM1 transferase activity","termid":"GO:0071568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0003674","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"UFM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061657"}


id: PBO:0063390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6-AHRR readthrough (NMD candidate)","termid":"PBO:0063390"}


id: PBO:0068430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 5","termid":"PBO:0068430"}


id: PBO:0055164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2584","termid":"PBO:0055164"}


id: GO:0103111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a [PTS enzyme I]-Npi-phospho-L-histidine + D-glucosamine = D-glucosamine 6-phosphate + a [PTS enzyme I]-L-histidine.","definition_xrefs":["GOC:pz","EC:2.7.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-glucosamine PTS permease activity","secondary_identifiers":["RHEA:37359","MetaCyc:TRANS-RXN-167A"],"termid":"GO:0103111"}


id: GO:0032897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral transcription","termid":"GO:0046782"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral transcription","synonyms":[{"name":"down regulation of viral transcription","type":"exact"},{"name":"down-regulation of viral transcription","type":"exact"},{"name":"downregulation of viral transcription","type":"exact"},{"name":"inhibition of viral transcription","type":"narrow"}],"termid":"GO:0032897"}


id: GO:0033503
data:
  {"annotated_genes":["SJAG_00320","SJAG_03006","SJAG_02319","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71322,71482,74218,89011],"is_not":false,"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex that contains two RING finger proteins, which have ubiquitin ligase activity, in addition to a protein with ubiquitin-conjugating enzyme activity; catalyzes the ubiquitination of histone H2B at lysine 119 (or the equivalent residue). In Schizosaccharomyces the subunits are Rhp6, Shf1, Brl2/Rfp1 and Brl1/Rfp2.","definition_xrefs":["GOC:mah","PMID:17363370","PMID:17374714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HULC complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0033503","terms_by_termid":{"GO:0033503":null}}


id: PBO:0029969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029969"}


id: GO:0072354
data:
  {"annotated_genes":["SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77053],"is_not":false,"summary":null,"term":"GO:0072354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 3) + ATP = histone H3-phosphothreonine (position 3) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 3 of histone H3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0003824","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"histone H3T3 kinase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"histone H3-T3 kinase activity","type":"exact"},{"name":"histone kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T3 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T3 specific)","type":"exact"}],"termid":"GO:0072354","terms_by_termid":{"GO:0072354":null}}


id: PBO:0065965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 1","termid":"PBO:0065965"}


id: PBO:0031262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0031262"}


id: GO:1904776
data:
  {"annotated_genes":["SJAG_04597","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[93972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell cortex.","definition_xrefs":["GOC:TermGenie","PMID:17115027","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"regulates","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to cell cortex","type":"exact"}],"termid":"GO:1904776","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: GO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidylamidoglycolate = peptidyl amide + glyoxylate.","definition_xrefs":["EC:4.3.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidylamidoglycolate lyase activity","secondary_identifiers":["MetaCyc:PEPTIDYLAMIDOGLYCOLATE-LYASE-RXN","RHEA:20924"],"synonyms":[{"name":"HGAD","type":"related"},{"name":"PAL","type":"related"},{"name":"PGL","type":"related"},{"name":"alpha-hydroxyglycine amidating dealkylase activity","type":"related"},{"name":"peptidyl-alpha-hydroxyglycine alpha-amidating lyase activity","type":"related"},{"name":"peptidylamidoglycolate peptidylamide-lyase (glyoxylate-forming)","type":"related"},{"name":"peptidylamidoglycolate peptidylamide-lyase activity","type":"related"}],"termid":"GO:0004598"}


id: GO:0043112
data:
  {"annotated_genes":["SJAG_01448","SJAG_03324","SJAG_02619"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96792,112426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016562"},{"annotations":[98107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001881"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_02619":null,"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"receptor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor metabolism","type":"exact"}],"termid":"GO:0043112","terms_by_termid":{"GO:0001881":null,"GO:0016562":null}}


id: PBO:0027205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_heat_shock","termid":"PBO:0027205"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: PBO:0090804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (UBR family) Ubr11","termid":"PBO:0090804"}


id: GO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.179","RHEA:22000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01430","MetaCyc:D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"D-xylose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"D-xylose-NADP dehydrogenase activity","type":"related"},{"name":"D-xylose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"D-xylose:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047837"}


id: PBO:0091666
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding RNAs (mlonRNA) initiated from sites upstream of fbp1 are transcribed prior to full transcriptional activation of fbp1 during glucose starvation","termid":"PBO:0091666"}


id: PR:Q65ZA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctf8 gene.","definition_xrefs":["UniProtKB:Q65ZA6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.11c","synonyms":[{"name":"Spom972h-ctf8","type":"exact"}],"termid":"PR:Q65ZA6"}


id: GO:0102870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-hydroxyflavone = 7-O-beta-D-glucosyl-7-hydroxyflavone + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"7-hydroxyflavone-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8355"],"termid":"GO:0102870"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: PBO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element modulator","termid":"PBO:0043886"}


id: GO:0015935
data:
  {"annotated_genes":["SJAG_04814","SJAG_03568","SJAG_00544","SJAG_00944","SJAG_03254","SJAG_01366","SJAG_00733","SJAG_03584","SJAG_00060","SJAG_00523","SJAG_02372","SJAG_01520","SJAG_02452","SJAG_04476","SJAG_01548","SJAG_03053","SJAG_01734","SJAG_04342","SJAG_01226","SJAG_00148","SJAG_02803","SJAG_02643","SJAG_01512","SJAG_01767","SJAG_03065","SJAG_04204","SJAG_00628","SJAG_02335","SJAG_00503","SJAG_01132","SJAG_02585","SJAG_02184","SJAG_03034","SJAG_03859","SJAG_03424","SJAG_00465","SJAG_02224","SJAG_00513","SJAG_02067","SJAG_02324","SJAG_02201","SJAG_04663","SJAG_01468","SJAG_02020","SJAG_04998","SJAG_04188","SJAG_02359","SJAG_04753","SJAG_04173","SJAG_02682","SJAG_04672","SJAG_04281","SJAG_01287","SJAG_04918","SJAG_02477","SJAG_04164","SJAG_03262","SJAG_04378","SJAG_02253","SJAG_01632","SJAG_04168","SJAG_00105","SJAG_00782","SJAG_02777","SJAG_02479","SJAG_00860","SJAG_01296","SJAG_04746","SJAG_01387","SJAG_02904","SJAG_02870","SJAG_02749","SJAG_00069","SJAG_02340","SJAG_04695","SJAG_02522","SJAG_04475","SJAG_04029","SJAG_02894","SJAG_02280","SJAG_02046","SJAG_05320","SJAG_03422","SJAG_04324","SJAG_04494","SJAG_03762","SJAG_00889","SJAG_01609","SJAG_04788","SJAG_00468","SJAG_02861","SJAG_04256","SJAG_04174"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87341],"is_not":false,"summary":null,"term":"GO:0015935"},{"annotations":[71028,73326,100790,109410,73438,95288,76761,75217,77297,106866,74095,73521,95536,100814,102078,111456,70629,73194,108646,91910,71287,70318,108647,109752,101473,73992,77292,74141,73977,89147,77800,111455,71297,100815,94192,71839,99856,109409,76220,74644,106865,91909,97032,89146,100789,75745,77464,109753,87253,97033,70282,78708,95287,106867,72646,90355,74272,74403,94191,74619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022627"},{"annotations":[111175,75141,92199,97768,101419,103433,90099,101777,85652,93532,72546,98512,75722,110747,73003,93533,103676,73851,105435,73802,99436,107603,93756,105951,113163,91506,89803,103920,72391,105670,77197,87723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a ribosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit","termid":"GO:0044391"}],"gene_count":93,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00069":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00544":null,"SJAG_00628":null,"SJAG_00733":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01132":null,"SJAG_01226":null,"SJAG_01287":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01387":null,"SJAG_01468":null,"SJAG_01512":null,"SJAG_01520":null,"SJAG_01548":null,"SJAG_01609":null,"SJAG_01632":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02020":null,"SJAG_02046":null,"SJAG_02067":null,"SJAG_02184":null,"SJAG_02201":null,"SJAG_02224":null,"SJAG_02253":null,"SJAG_02280":null,"SJAG_02324":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02359":null,"SJAG_02372":null,"SJAG_02452":null,"SJAG_02477":null,"SJAG_02479":null,"SJAG_02522":null,"SJAG_02585":null,"SJAG_02643":null,"SJAG_02682":null,"SJAG_02749":null,"SJAG_02777":null,"SJAG_02803":null,"SJAG_02861":null,"SJAG_02870":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03034":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03254":null,"SJAG_03262":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03568":null,"SJAG_03584":null,"SJAG_03762":null,"SJAG_03859":null,"SJAG_04029":null,"SJAG_04164":null,"SJAG_04168":null,"SJAG_04173":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04204":null,"SJAG_04256":null,"SJAG_04281":null,"SJAG_04324":null,"SJAG_04342":null,"SJAG_04378":null,"SJAG_04475":null,"SJAG_04476":null,"SJAG_04494":null,"SJAG_04663":null,"SJAG_04672":null,"SJAG_04695":null,"SJAG_04746":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04814":null,"SJAG_04918":null,"SJAG_04998":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"small ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ribosomal small subunit","type":"exact"}],"termid":"GO:0015935","terms_by_termid":{"GO:0005763":null,"GO:0015935":null,"GO:0022627":null}}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: GO:0015047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome c2 = NADP+ + 2 ferrocytochrome c2.","definition_xrefs":["EC:1.6.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH-cytochrome-c2 reductase activity","secondary_identifiers":["MetaCyc:NADPH--CYTOCHROME-C2-REDUCTASE-RXN","RHEA:15237"],"synonyms":[{"name":"NADPH:ferricytochrome-c2 oxidoreductase activity","type":"related"},{"name":"cytochrome c2 reductase (reduced nicotinamide adinine dinucleotide phosphate, NADPH)","type":"related"},{"name":"reductase, cytochrome c2 (reduced nicotinamide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0015047"}


id: PR:O94246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate--cysteine ligase regulatory subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13295:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate--cysteine ligase regulatory subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.06c","secondary_identifiers":["UniProtKB:O94246"],"synonyms":[{"name":"GCS light chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GCLM","type":"exact"},{"name":"gamma-ECS regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-glutamylcysteine synthetase regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate--cysteine ligase modifier subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94246"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: PBO:0029616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_shape","termid":"PBO:0029616"}


id: PBO:0080942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1","termid":"PBO:0080942"}


id: PBO:0026723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcript_length","termid":"PBO:0026723"}


id: GO:0098538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the transport vesicle membrane that faces the lumen.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"transport vesicle membrane","termid":"GO:0030658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"lumenal side of transport vesicle membrane","synonyms":[{"name":"internal side of transport vesicle membrane","type":"exact"}],"termid":"GO:0098538"}


id: GO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the jasmonic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont jasmonic acid-mediated defense response (obsolete GO:0052487)","synonyms":[{"name":"negative regulation by organism of symbiont jasmonic acid-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont JA-mediated defense response","type":"exact"}],"termid":"GO:0052487"}


id: PBO:0072386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 12","termid":"PBO:0072386"}


id: FYPO:0006944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount on one or more ribosomal proteins measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PMID:30862564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased ribosomal protein level","synonyms":[{"name":"decreased cellular ribosomal protein level","type":"exact"},{"name":"decreased ribosomal protein level during mitotic cell cycle","type":"related"},{"name":"decreased ribosomal protein level during vegetative growth","type":"exact"},{"name":"reduced ribosomal protein level","type":"exact"}],"termid":"FYPO:0006944"}


id: PBO:0040323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit epsilon pseudogene 2","termid":"PBO:0040323"}


id: PBO:0065562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 2","termid":"PBO:0065562"}


id: PBO:0059078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 1","termid":"PBO:0059078"}


id: GO:1990306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of RSP5 and BUL components. It polyubiquinates plasma membrane transporters and permeases, required for their endocytosis and subsequent degradation in the vacuole. BUL1 or BUL2, respectively, bind to the target protein, enabling ubiquitylation by Rsp5. Phosphorylation of BUL proteins results in binding to 14-3-3 proteins, protecting the permeases from down-regulation.","definition_xrefs":["PMID:9931424","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RSP5-BUL ubiquitin ligase complex","synonyms":[{"name":"RSP5-BUL1 complex","type":"exact"},{"name":"RSP5-BUL2 complex","type":"related"}],"termid":"GO:1990306"}


id: GO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-12 and that consists of, at a minimum, a dimeric interleukin and its two receptor subunits as well as optional additional kinase subunits.","definition_xrefs":["PMID:10971505","GOC:ebc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-12 receptor complex","synonyms":[{"name":"IL-12 receptor complex","type":"exact"},{"name":"IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0042022"}


id: PBO:0060070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 17","termid":"PBO:0060070"}


id: PBO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 1","termid":"PBO:0046405"}


id: PBO:0079984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 22","termid":"PBO:0079984"}


id: PBO:0000994
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi anemia","termid":"PBO:0000994"}


id: PATO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathlike","termid":"PATO:0002467"}


id: PBO:0057540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 656","termid":"PBO:0057540"}


id: PATO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lateral","termid":"PATO:0001649"}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: GO:0000839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["PMID:16873066","PMID:16873065","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-L complex","termid":"GO:0000839"}


id: PBO:0031905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved transmembrane protein (predicted)","termid":"PBO:0031905"}


id: GO:0036068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the absence of light.","definition_xrefs":["PMID:12242396","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"light-independent chlorophyll biosynthetic process","synonyms":[{"name":"light independent chlorophyll biosynthetic process","type":"exact"},{"name":"light-independent chlorophyll anabolism","type":"exact"},{"name":"light-independent chlorophyll biosynthesis","type":"exact"},{"name":"light-independent chlorophyll formation","type":"exact"},{"name":"light-independent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036068"}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: SO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK15_acetylation_site","synonyms":[{"name":"H2BK15 acetylation site","type":"exact"},{"name":"H2BK15ac","type":"exact"}],"termid":"SO:0001946"}


id: PBO:0044848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131C (pseudogene)","termid":"PBO:0044848"}


id: GO:0042479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"is_a","term_name":"positive regulation of photoreceptor cell differentiation","termid":"GO:0046534"},{"relation_name":"positively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye photoreceptor cell development","synonyms":[{"name":"activation of eye photoreceptor cell development","type":"narrow"},{"name":"positive regulation of eye photoreceptor development","type":"exact"},{"name":"stimulation of eye photoreceptor cell development","type":"narrow"},{"name":"up regulation of eye photoreceptor cell development","type":"exact"},{"name":"up-regulation of eye photoreceptor cell development","type":"exact"},{"name":"upregulation of eye photoreceptor cell development","type":"exact"}],"termid":"GO:0042479"}


id: PBO:0052431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klotho","termid":"PBO:0052431"}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000058","PMID:14690602","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: GO:0060081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which membrane potential increases with respect to its steady-state potential, usually from negative potential to a more negative potential. For example, during the repolarization phase of an action potential the membrane potential often becomes more negative or hyperpolarized before returning to the steady-state resting potential.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane hyperpolarization","termid":"GO:0060081"}


id: PR:Q9P3V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1348.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.05","synonyms":[{"name":"Spom972h-SPBC1348.05","type":"exact"}],"termid":"PR:Q9P3V5"}


id: GO:1990909
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein protein complex containing membrane-localized Wnt receptors and cytosolic protein complexes, which is capable of transmitting the Wnt signal. Contains at least a Wnt protein, LRP5 or LRP6, a member of the Frizzled (Fz) family, Axin and and a Dishevelled (DVL) protein.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22899650","PMID:25336320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Wnt signalosome","synonyms":[{"name":"LRP5/6 signalosome","type":"exact"},{"name":"LRP6 signalosome","type":"narrow"},{"name":"Wnt signalosome complex","type":"exact"},{"name":"Wnt-LRP5/6 signalosome","type":"exact"}],"termid":"GO:1990909"}


id: PBO:0085658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA export; component of the transcription export (TREX) complex","termid":"PBO:0085658"}


id: PBO:0084908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, protein involved in mitochondrial outer membrane fusion; role in mitochondrial genome maintenance; efficient tethering and degradation of Fzo1p requires an intact N-terminal GTPase domain; targeted for destruction by the ubiquitin ligase SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitylation at conserved lysine residues and by  deubiquitylases Ubp2p and Ubp12p","termid":"PBO:0084908"}


id: PBO:0025498
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cdc Eleven","termid":"PBO:0025498"}


id: GO:0007276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.","definition_xrefs":["GOC:mtg_sensu","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"sexual reproduction","termid":"GO:0019953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamete generation","secondary_identifiers":["GO:0009552"],"synonyms":[{"name":"gametogenesis","type":"related"}],"termid":"GO:0007276"}


id: PBO:0079755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin","termid":"PBO:0079755"}


id: PBO:0088967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger ribosome biogenesis protein Bud20","termid":"PBO:0088967"}


id: PBO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_mutualism","termid":"PBO:0034147"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: FYPO:0005964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of lithium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal lithium import","synonyms":[{"name":"abnormal cellular lithium import","type":"exact"},{"name":"abnormal lithium import during mitotic cell cycle","type":"related"},{"name":"abnormal lithium import during vegetative growth","type":"exact"},{"name":"abnormal lithium import into cell","type":"exact"},{"name":"abnormal lithium ion import","type":"exact"}],"termid":"FYPO:0005964"}


id: SO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a histone.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone_binding_site","synonyms":[{"name":"histone binding site","type":"exact"}],"termid":"SO:0001383"}


id: PBO:0042245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 7","termid":"PBO:0042245"}


id: GO:0035498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the dipeptide beta-alanyl-L-histidine (carnosine).","definition_xrefs":["PMID:20097752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carnosine metabolic process","synonyms":[{"name":"carnosine metabolism","type":"exact"}],"termid":"GO:0035498"}


id: GO:0000322
data:
  {"annotated_genes":["SJAG_04167","SJAG_01505","SJAG_02581","SJAG_02356","SJAG_02440","SJAG_01183","SJAG_05194","SJAG_03987","SJAG_01493","SJAG_02716","SJAG_03511","SJAG_05210","SJAG_00115","SJAG_02315","SJAG_03895","SJAG_04506","SJAG_01319","SJAG_04023","SJAG_04232","SJAG_01072","SJAG_00587","SJAG_04785","SJAG_04637","SJAG_02330","SJAG_01299","SJAG_00051","SJAG_01036","SJAG_04015","SJAG_03951","SJAG_01983","SJAG_01990","SJAG_00570","SJAG_01619","SJAG_01941","SJAG_02076","SJAG_02665","SJAG_01978","SJAG_01612","SJAG_02495","SJAG_02694","SJAG_02060","SJAG_04698","SJAG_02196","SJAG_00589","SJAG_00638","SJAG_00824","SJAG_03138","SJAG_01145","SJAG_04725","SJAG_00732","SJAG_03960","SJAG_03009","SJAG_00132","SJAG_05294","SJAG_02114","SJAG_03250","SJAG_02656","SJAG_01471","SJAG_04867","SJAG_00688","SJAG_02902","SJAG_05184","SJAG_01088","SJAG_03137","SJAG_02603","SJAG_00821","SJAG_02699","SJAG_00181","SJAG_04966","SJAG_03652","SJAG_01991","SJAG_01027","SJAG_01080","SJAG_04717","SJAG_01033","SJAG_04471","SJAG_00209","SJAG_05245","SJAG_02029","SJAG_04643","SJAG_00018","SJAG_00457","SJAG_03400","SJAG_01507","SJAG_03450","SJAG_03447","SJAG_00877","SJAG_03405","SJAG_03316","SJAG_01112","SJAG_00370","SJAG_02565","SJAG_02117","SJAG_02344","SJAG_03256","SJAG_03899","SJAG_01095","SJAG_03442","SJAG_03022","SJAG_01236","SJAG_05213","SJAG_03608","SJAG_03100","SJAG_04819","SJAG_03508","SJAG_02962","SJAG_03363","SJAG_03371","SJAG_01344","SJAG_01320","SJAG_04426","SJAG_01783","SJAG_00516","SJAG_02414","SJAG_03586","SJAG_01817","SJAG_02853","SJAG_03606","SJAG_02023","SJAG_00620","SJAG_01078","SJAG_00029","SJAG_01913","SJAG_03089","SJAG_01509","SJAG_02782","SJAG_03667","SJAG_01571","SJAG_03976","SJAG_02132","SJAG_02100","SJAG_03403","SJAG_01219","SJAG_04790","SJAG_03406","SJAG_03725","SJAG_04714","SJAG_00402","SJAG_03848","SJAG_04963","SJAG_03928","SJAG_05342","SJAG_03656","SJAG_01868","SJAG_02578","SJAG_00212","SJAG_00771","SJAG_02289","SJAG_02433","SJAG_02432","SJAG_01407","SJAG_03072","SJAG_04955","SJAG_01795","SJAG_01032","SJAG_04502","SJAG_04616","SJAG_01324","SJAG_03313","SJAG_02103","SJAG_02943","SJAG_04312","SJAG_07012","SJAG_01803","SJAG_00299","SJAG_00534","SJAG_03497","SJAG_04975","SJAG_03909","SJAG_01400","SJAG_02957"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90412,109379,73598,99195,104145,70325,104772,85853,91648,90670,92058,107955,99428,111970,77352,72013,85852,70813,74648,93149,94067,96994,83724,73394,74607,75927,84212,70683,99813,72537,75498,83917,78083,92524,102987,104656,78544,104755,105105,78734,108092,107585,72175,98371,113040,97310,109930,102898,94072,98444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000324"},{"annotations":[109651,101140,83268,97149,109384,89537,70687,93178,108525,111010,93390],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[112904,83799,75312,93167,94352,78378,95468,103614,104608,108775,72422,112495,95717,112710,107064,92612,77863,72077,87152,104009,107042,104695,73367,74744,99011,101097,105681,94392,87756,102052,102755,92915,74041,77891,91238,89385,105550,86106,70609,109541,113274,71176,91716,72884,78548,102044,108463,74369,111771,110068,91606,97434,112156,91980,72430,90230,84812,84880,88520,88599,73769,91349,70741,84894,94228,95739,89651,75649,72797,74248,78665,84834,89678,91562,95432,99343,100294,103204,102555,111361,105174,89386,72815,100360,112370,112651,78298,78896,83817,90201,78694,93893,109546,89330,93590,111700,70454,100518,94088,83522,77413,72202,77325,87698,91476,89512,97112,70944,99226,108636],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"A vacuole that functions primarily in the storage of materials, including nutrients, pigments, waste products, and small molecules.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":171,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00181":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00370":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03316":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04167":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"storage vacuole","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000322","terms_by_termid":{"GO:0000324":null,"GO:0000328":null,"GO:0000329":null}}


id: PBO:0082147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the presence of oxygen; ARE2 has a paralog, ARE1, that arose from the whole genome duplication","termid":"PBO:0082147"}


id: RO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a colocalizes_with b if and only if  a is transiently or peripherally associated with b[GO].","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"RO:0002325"}


id: FYPO:0001465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases to a lesser extent than normal immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PomBase:mah","PMID:21811607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal immediate intracellular calcium spike following extracellular calcium stimulus","termid":"FYPO:0001463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"decreased immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"},{"name":"reduced immediate intracellular calcium spike following extracellular calcium stimulus","type":"exact"}],"termid":"FYPO:0001465"}


id: FYPO:0006877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that undergoes two or more rounds of cell division, but then lyses during cytokinesis and dies.","definition_xrefs":["PMID:30044717","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"cell lysis during cytokinesis","termid":"FYPO:0003440"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, with abnormal septation","termid":"FYPO:0006878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, cell lysis during cytokinesis","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, cytolysis during cytokinesis","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, lysed cell during cytokinesis","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, cell lysis during cytokinesis","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, cell lysis during cytokinesis","type":"exact"}],"termid":"FYPO:0006877"}


id: PBO:0081430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 284","termid":"PBO:0081430"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: GO:0018107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}


id: GO:0140599
data:
  {"annotated_genes":["SJAG_01584","SJAG_04148","SJAG_03200","SJAG_04578","SJAG_01374","SJAG_04284","SJAG_03729","SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85844,86627,86995,91701,105712,105746,111200,111575],"is_not":false,"summary":null,"term":"GO:0140599"}]},"cv_name":"cellular_component","definition":"A nuclear membrane part at the midzone of the mitotic nuclear bridge. The midzone forms a bulge that is enriched in nuclear pores that lack baskets.","definition_xrefs":["PMID:32502403","PMID:25963819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge midzone","termid":"GO:0140512"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01374":null,"SJAG_01584":null,"SJAG_01745":null,"SJAG_03200":null,"SJAG_03729":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"mitotic nuclear bridge midzone membrane domain","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140599","terms_by_termid":{"GO:0140599":null}}


id: PBO:0053742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 968","termid":"PBO:0053742"}


id: FYPO:0004771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glycine level","synonyms":[{"name":"increased level of glycine in vacuole","type":"exact"},{"name":"increased vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004771"}


id: PBO:0051986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Janus kinase 2","termid":"PBO:0051986"}


id: PBO:0051410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-44","termid":"PBO:0051410"}


id: GO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral DNA genome.","definition_xrefs":["VZ:915","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"viral DNA genome replication","secondary_identifiers":["GO:0039681"],"synonyms":[{"name":"DNA-dependent viral DNA replication","type":"exact"},{"name":"viral DNA replication","type":"exact"},{"name":"viral DNA-dependent DNA replication","type":"exact"}],"termid":"GO:0039693"}


id: PBO:0011101
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription repressed by copper","termid":"PBO:0011101"}


id: PBO:0034805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex ubiquitin-protein ligase E3 subunit Nse1","termid":"PBO:0034805"}


id: GO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region that regulates a nucleic acid-based process. Such processes include transcription, DNA replication, and DNA repair.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulatory region nucleic acid binding","termid":"GO:0001067"},{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"regulatory region RNA binding","termid":"GO:0001069"}


id: GO:0098923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an soluble gas ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by soluble gas","termid":"GO:0098923"}


id: PBO:0028007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoskeleton","termid":"PBO:0028007"}


id: PBO:0088613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear HMG-like acidic protein Mak16","termid":"PBO:0088613"}


id: GO:1903993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein stabilization.","definition_xrefs":["PMID:18573880","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein stabilization (obsolete GO:1903993)","synonyms":[{"name":"down regulation of lysosomal protein stabilization","type":"narrow"},{"name":"down regulation of positive regulation of protein stability","type":"exact"},{"name":"down regulation of protein sequestering","type":"related"},{"name":"down regulation of protein stabilization","type":"exact"},{"name":"down regulation of protein stabilization activity","type":"related"},{"name":"down-regulation of lysosomal protein stabilization","type":"narrow"},{"name":"down-regulation of positive regulation of protein stability","type":"exact"},{"name":"down-regulation of protein sequestering","type":"related"},{"name":"down-regulation of protein stabilization","type":"exact"},{"name":"down-regulation of protein stabilization activity","type":"related"},{"name":"downregulation of lysosomal protein stabilization","type":"narrow"},{"name":"downregulation of positive regulation of protein stability","type":"exact"},{"name":"downregulation of protein sequestering","type":"related"},{"name":"downregulation of protein stabilization","type":"exact"},{"name":"downregulation of protein stabilization activity","type":"related"},{"name":"inhibition of lysosomal protein stabilization","type":"narrow"},{"name":"inhibition of positive regulation of protein stability","type":"narrow"},{"name":"inhibition of protein sequestering","type":"related"},{"name":"inhibition of protein stabilization","type":"narrow"},{"name":"inhibition of protein stabilization activity","type":"related"},{"name":"negative regulation of lysosomal protein stabilization","type":"narrow"},{"name":"negative regulation of positive regulation of protein stability","type":"exact"},{"name":"negative regulation of protein sequestering","type":"related"},{"name":"negative regulation of protein stabilization","type":"exact"},{"name":"negative regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903993"}


id: PBO:0081984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 10","termid":"PBO:0081984"}


id: PBO:0038873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase complexing protein 1","termid":"PBO:0038873"}


id: PBO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 2","termid":"PBO:0060899"}


id: GO:0048857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a neural nucleus from its initial condition to its mature state. A neural nucleus is an anatomical structure consisting of a discrete aggregate of neuronal soma.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural nucleus development","termid":"GO:0048857"}


id: PBO:0058391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4763","termid":"PBO:0058391"}


id: GO:1902384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycyrrhetinate.","definition_xrefs":["PMID:22128119","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate metabolic process","synonyms":[{"name":"glycyrrhetinate metabolism","type":"exact"}],"termid":"GO:1902384"}


id: GO:0032173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tubular, hourglass-shaped structure composed of highly ordered arrays of septin filaments; in budding yeast cells, the septin collar forms from the initial septin ring by expanding into the daughter cell.","definition_xrefs":["PMID:16151244","GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin collar","synonyms":[{"name":"septin hourglass","type":"exact"}],"termid":"GO:0032173"}


id: GO:0009781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Processes by which a molecule of water is oxidized during photosynthesis. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["ISBN:0816017360","GOC:jid","ISBN:0716743663"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic water oxidation (obsolete GO:0009781)","synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0009781"}


id: GO:0102659
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 4-methylthiobutylhydroximate = H+ + 3-methylthiopropyl-desulfoglucosinolate + UDP.","definition_xrefs":["EC:2.4.1.195","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-2208"],"termid":"GO:0102659"}


id: CHEBI:76243
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous ammonium sulfate (anhydrous)","termid":"CHEBI:76243"}


id: FYPO:0002616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to pre-autophagosomal structure","synonyms":[{"name":"increased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"increased protein localization to PAS","type":"exact"},{"name":"increased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"increased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002616"}


id: GO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves chromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin maintenance (obsolete GO:0070827)","termid":"GO:0070827"}


id: FYPO:0001207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to raffinose. Cells stop growing (and may die) at a concentration of raffinose that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to raffinose","synonyms":[{"name":"hypersensitive to raffinose","type":"exact"},{"name":"sensitive to raffinose during mitotic cell cycle","type":"related"},{"name":"sensitive to raffinose during vegetative growth","type":"exact"}],"termid":"FYPO:0001207"}


id: PBO:0057570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 765","termid":"PBO:0057570"}


id: MOD:01450
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an N-formyl-L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N-formyl-L-methionine residue","termid":"MOD:00030"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified N-formyl-L-methionine residue","termid":"MOD:01450"}


id: PBO:0079567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated and SH3 domain containing B","termid":"PBO:0079567"}


id: GO:0015802
data:
  {"annotated_genes":["SJAG_02029","SJAG_01636","SJAG_02716","SJAG_04787","SJAG_04725","SJAG_03256","SJAG_01923","SJAG_00051","SJAG_01336","SJAG_00877","SJAG_04983","SJAG_04715","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[99456,99458,91287,99459,99457,92901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[99266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63324,94353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[92917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[98247,99270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[105327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01336":null,"SJAG_01636":null,"SJAG_01923":null,"SJAG_02029":null,"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04715":null,"SJAG_04725":null,"SJAG_04787":null,"SJAG_04983":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015802","terms_by_termid":{"GO:0034488":null,"GO:0034490":null,"GO:0089708":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null,"GO:1901482":null,"GO:1903826":null,"GO:1990822":null}}


id: FYPO:0005484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"},{"relation_name":"is_a","term_name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased inositol phosphate phosphatase activity","synonyms":[{"name":"reduced inositol phosphate phosphatase activity","type":"exact"}],"termid":"FYPO:0005484"}


id: GO:0018704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-2-hydroxymuconic semialdehyde + H+ + 2 e- = Cl- + 2-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_enzymeID:e0237"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-2-hydroxymuconic semialdehyde dehalogenase activity (obsolete GO:0018704)","synonyms":[{"name":"5-chloro-2-hydroxymuconic semialdehyde dehalogenase activity","type":"exact"}],"termid":"GO:0018704"}


id: PBO:0055154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2573","termid":"PBO:0055154"}


id: PBO:0036449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon-exon junction complex disassembly factor Mni1 (predicted)","termid":"PBO:0036449"}


id: SO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of an acyclic three-carbon propylene glycol connected to a phosphate backbone. It has two enantiomeric forms, (R)-GNA and (S)-GNA.","definition_xrefs":["CHEBI:48015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA","termid":"SO:0001192"}


id: GO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin catabolic process","termid":"GO:0009852"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"indoleacetic acid catabolic process","synonyms":[{"name":"IAA catabolic process","type":"exact"},{"name":"indole acetic acid catabolic process","type":"exact"},{"name":"indole acetic acid catabolism","type":"exact"},{"name":"indoleacetic acid breakdown","type":"exact"},{"name":"indoleacetic acid catabolism","type":"exact"},{"name":"indoleacetic acid degradation","type":"exact"}],"termid":"GO:0042437"}


id: PBO:0067023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 36, pseudogene","termid":"PBO:0067023"}


id: PBO:0042883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 276","termid":"PBO:0042883"}


id: GO:0033082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrathymic T cell differentiation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extrathymic T cell differentiation","synonyms":[{"name":"regulation of extrathymic T cell development","type":"related"}],"termid":"GO:0033082"}


id: GO:0035500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MH2 (MAD homology 2) protein domain. The MH2 domain is found at the carboxy-terminus of MAD related proteins such as Smads. The MH2 domain mediates interaction with a wide variety of proteins and provides specificity and selectivity to Smad function and also is critical for mediating interactions in Smad oligomers.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"MH2 domain binding","synonyms":[{"name":"MAD homology 2 domain binding","type":"exact"}],"termid":"GO:0035500"}


id: PBO:0061895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive 3","termid":"PBO:0061895"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: PBO:0091316
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP1","termid":"PBO:0091316"}


id: PR:Q8WZJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpc31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8WZJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III subunit rpc31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.12","synonyms":[{"name":"DNA-directed RNA polymerase III 31 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase III subunit C31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpc31","type":"exact"}],"termid":"PR:Q8WZJ8"}


id: PBO:0060477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOGNB pseudogene 2","termid":"PBO:0060477"}


id: PR:Q09698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cph2 gene.","definition_xrefs":["UniProtKB:Q09698","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.07c","synonyms":[{"name":"Spom972h-cph2","type":"exact"}],"termid":"PR:Q09698"}


id: SO:0000967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded, circular RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"double_stranded_RNA_chromosome","termid":"SO:0000965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_double_stranded_RNA_chromosome","synonyms":[{"name":"circular double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000967"}


id: GO:1900070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:16278455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: GO:1905852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of backward locomotion.","definition_xrefs":["GOC:TermGenie","PMID:11717360","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"regulation of backward locomotion","termid":"GO:0043058"},{"relation_name":"positively_regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of backward locomotion","synonyms":[{"name":"activation of backward locomotion","type":"narrow"},{"name":"up regulation of backward locomotion","type":"exact"},{"name":"up-regulation of backward locomotion","type":"exact"},{"name":"upregulation of backward locomotion","type":"exact"}],"termid":"GO:1905852"}


id: PBO:0058339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4713","termid":"PBO:0058339"}


id: GO:0019911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of myelin sheath","termid":"GO:0019911"}


id: GO:0031979
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a plasma membrane-derived thylakoid.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid lumen","termid":"GO:0031977"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid lumen","synonyms":[{"name":"plasma membrane thylakoid lumen","type":"exact"}],"termid":"GO:0031979"}


id: GO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+.","definition_xrefs":["EC:1.14.12.15","RHEA:10312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"terephthalate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05148","MetaCyc:1.14.12.15-RXN","UM-BBD_reactionID:r0150"],"synonyms":[{"name":"1,4-dicarboxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018628"}


id: PBO:0085537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S8, no bacterial homolog; RPS8A has a paralog, RPS8B, that arose from the whole genome duplication","termid":"PBO:0085537"}


id: GO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lutein.","definition_xrefs":["PMID:24397433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll catabolic process","termid":"GO:0016124"},{"relation_name":"is_a","term_name":"lutein metabolic process","termid":"GO:0062170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lutein catabolic process","synonyms":[{"name":"lutein breakdown","type":"exact"},{"name":"lutein catabolism","type":"exact"},{"name":"lutein degradation","type":"exact"}],"termid":"GO:0062172"}


id: GO:0043902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a multi-organism process, a process in which an organism has an effect on another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of multi-organism process (obsolete GO:0043902)","termid":"GO:0043902"}


id: PBO:0072819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD12 antisense RNA 1","termid":"PBO:0072819"}


id: PBO:0066259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 2","termid":"PBO:0066259"}


id: FYPO:0004649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body during metaphase does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0006825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"abolished protein localization to spindle pole body during metaphase during mitotic cell cycle","type":"exact"},{"name":"protein absent from mitotic spindle pole body during metaphase","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic SPB abolished during metaphase","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during metaphase","type":"exact"},{"name":"protein localization to spindle pole body abolished during metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0004649"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: GO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain aldehyde + NAD+ = a long-chain carboxylate + NADH + H+. A long-chain aldehyde is one with more than 12 carbons.","definition_xrefs":["MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN","EC:1.2.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"long-chain-aldehyde dehydrogenase activity","secondary_identifiers":["RHEA:10652","UM-BBD_reactionID:r1404"],"synonyms":[{"name":"fatty aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"long-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050061"}


id: PBO:0088542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22","termid":"PBO:0088542"}


id: PBO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 38","termid":"PBO:0070667"}


id: GO:0006541
data:
  {"annotated_genes":["SJAG_04634","SJAG_03355","SJAG_03775","SJAG_01455","SJAG_04054","SJAG_00359","SJAG_03266","SJAG_00811","SJAG_00964","SJAG_00691","SJAG_00392","SJAG_02408","SJAG_05024","SJAG_02276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56865,60740,63275,64388,67626,67752,68876,71835,72205,106345],"is_not":false,"summary":null,"term":"GO:0006541"},{"annotations":[72060,89881,112837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[71479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[96677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00392":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01455":null,"SJAG_02276":null,"SJAG_02408":null,"SJAG_03266":null,"SJAG_03355":null,"SJAG_03775":null,"SJAG_04054":null,"SJAG_04634":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glutamine metabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glutamine metabolism","type":"exact"}],"termid":"GO:0006541","terms_by_termid":{"GO:0006541":null,"GO:0006542":null,"GO:0006543":null,"GO:0019676":null}}


id: PBO:0067305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 391, pseudogene","termid":"PBO:0067305"}


id: PR:O42657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP and coiled-coil domain-containing protein C27D7.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.02c","synonyms":[{"name":"Spom972h-SPAC27D7.02c","type":"exact"}],"termid":"PR:O42657"}


id: GO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units.","definition_xrefs":["EC:3.2.1.65","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"levanase activity","secondary_identifiers":["MetaCyc:3.2.1.65-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan fructanohydrolase activity","type":"related"},{"name":"levan hydrolase activity","type":"exact"}],"termid":"GO:0031219"}


id: FYPO:0007423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs less frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:32355220","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gross chromosomal rearrangement","termid":"FYPO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased isochromosome formation","synonyms":[{"name":"decreased isochromosome formation during mitotic cell cycle","type":"related"},{"name":"decreased isochromosome formation during vegetative growth","type":"exact"},{"name":"decreased occurrence of isochromosome formation","type":"exact"},{"name":"reduced isochromosome formation","type":"exact"}],"termid":"FYPO:0007423"}


id: PR:P0CH07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi2 gene.","definition_xrefs":["UniProtKB:P0CH07","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.12c","synonyms":[{"name":"SPAC1805.12c","type":"related"},{"name":"Spom972h-ubi2","type":"exact"},{"name":"uep1","type":"related"}],"termid":"PR:P0CH07"}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0062758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 3 pseudogene","termid":"PBO:0062758"}


id: PBO:0089913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18","termid":"PBO:0089913"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: PR:Q9P3T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps502 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.10c","synonyms":[{"name":"Spom972h-rps502","type":"exact"}],"termid":"PR:Q9P3T6"}


id: GO:0044786
data:
  {"annotated_genes":["SJAG_02627","SJAG_00399","SJAG_02908","SJAG_02610","SJAG_05232","SJAG_01644","SJAG_04879","SJAG_02294","SJAG_00728","SJAG_00618","SJAG_03438","SJAG_02822","SJAG_02182","SJAG_00874","SJAG_04183","SJAG_01762","SJAG_02162","SJAG_03495","SJAG_04671","SJAG_02818","SJAG_02198","SJAG_02690","SJAG_04816","SJAG_03840","SJAG_00998","SJAG_00364","SJAG_01677","SJAG_00400","SJAG_01374","SJAG_04877","SJAG_05180","SJAG_00327","SJAG_00814","SJAG_05301","SJAG_04995","SJAG_02394","SJAG_02039","SJAG_00729","SJAG_06022","SJAG_02992","SJAG_03525","SJAG_00884","SJAG_03843","SJAG_03780","SJAG_02667","SJAG_03855","SJAG_00696","SJAG_01624","SJAG_01698","SJAG_00573","SJAG_02172","SJAG_02098","SJAG_01267","SJAG_03722","SJAG_03927","SJAG_01777","SJAG_00863","SJAG_02439","SJAG_03898","SJAG_02199","SJAG_01832","SJAG_00857","SJAG_05239","SJAG_01010","SJAG_02079","SJAG_02074","SJAG_02800","SJAG_01823","SJAG_01354","SJAG_04190","SJAG_04272","SJAG_04150","SJAG_00311","SJAG_03160","SJAG_01884","SJAG_01410","SJAG_03695","SJAG_00536","SJAG_03451","SJAG_03720","SJAG_00272","SJAG_03048","SJAG_01076","SJAG_04994","SJAG_02348","SJAG_01378","SJAG_05197","SJAG_01210","SJAG_04341","SJAG_00198","SJAG_02607","SJAG_01221","SJAG_04210","SJAG_01068"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92718,107969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902298"},{"annotations":[102705,110569,105249,108785],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[90649,108786,105251,70575,110570,107520,107757],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[98747],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[85317,94803,104886,106811,108061,93662,99846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902969"},{"annotations":[106901,70301,107158,74656,72699,105847,86148,78085,77963,87614,94928,108704,71895,73336,76148,71981,102708,102607,108386,110572,110454,92883,92983,74157,98395,103399,108788,101808,110294,77578],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[113259,98273,104435,100325,90822,99657],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[100326,102709,99658,102354,90855,85305,89583,90823],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[104451,107013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[71894,105848,86149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[87789],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902979"},{"annotations":[98749,105849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[91751,86635,90423,94478,104870,93788,94593,103094,104407,91595,84913,107760,111949,90663,103117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[95212,85487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902990"},{"annotations":[111993],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[93321,104221,97827],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[96985,99586,90651,88278,71968,96090,96125],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[112394,98750,107292],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[97832,111399,84807,101998],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[97836],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[110456,92984,105519,90824,102711,87615,101809,99754,102608,106813,110295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[94875],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"},{"annotations":[84080,107761,99587,98387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"},{"annotations":[70620,111418,112455,61746,110686,74655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902981"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that takes place as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"cell cycle 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cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0044786","terms_by_termid":{"GO:0006279":null,"GO:0140529":null,"GO:0140530":null,"GO:1902298":null,"GO:1902969":null,"GO:1902975":null,"GO:1902977":null,"GO:1902979":null,"GO:1902981":null,"GO:1902983":null,"GO:1902985":null,"GO:1902990":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904514":null,"GO:1990426":null,"GO:1990505":null}}


id: PR:Q10477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.05c","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc3","type":"exact"},{"name":"mediator complex subunit 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10477"}


id: GO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"plus-end-directed organelle transport along microtubule","termid":"GO:0072386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule plus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072383"}


id: PBO:0042243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR5 antisense RNA","termid":"PBO:0042243"}


id: FYPO:0002208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has a larger volume than normal and an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen spore","termid":"FYPO:0002207"},{"relation_name":"is_a","term_name":"inviable spore with abnormal shape","termid":"FYPO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable swollen spore with abnormal shape","secondary_identifiers":["FYPO:0002205"],"synonyms":[{"name":"inviable enlarged spore with abnormal shape","type":"related"},{"name":"inviable large spore with abnormal shape","type":"related"},{"name":"inviable spore with increased size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore size and abnormal shape","type":"related"},{"name":"inviable spore with increased spore volume and abnormal shape","type":"exact"},{"name":"inviable spore with increased volume and abnormal shape","type":"exact"},{"name":"inviable swollen abnormally shaped spore","type":"exact"},{"name":"inviable swollen misshapen spore","type":"related"},{"name":"lethal; swollen spore with abnormal shape","type":"exact"},{"name":"spore germination abolished, enlarged spore with abnormal shape","type":"related"},{"name":"spore germination abolished, large spore with abnormal shape","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell size","type":"related"},{"name":"spore germination abolished, spore with abnormal shape and increased cell volume","type":"exact"},{"name":"spore germination abolished, swollen misshapen spores","type":"related"},{"name":"spore germination abolished, swollen spore with abnormal shape","type":"related"}],"termid":"FYPO:0002208"}


id: PBO:0041807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 18","termid":"PBO:0041807"}


id: GO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.","definition_xrefs":["PMID:12704238","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV pilus-dependent motility","synonyms":[{"name":"TFP-dependent motility","type":"exact"},{"name":"TFP-dependent movement","type":"exact"},{"name":"social gliding motility","type":"narrow"},{"name":"twitching motility","type":"narrow"},{"name":"type 4 pilus-dependent motility","type":"exact"},{"name":"type four pilus-dependent motility","type":"exact"}],"termid":"GO:0043107"}


id: PBO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member A","termid":"PBO:0047269"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: PBO:0058770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6894","termid":"PBO:0058770"}


id: MOD:00096
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamic acid 1-amide.","definition_xrefs":["PubMed:1093875","PubMed:14550575","RESID:AA0087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid 1-amide","synonyms":[{"name":"(2S)-2-amino-1-pentanediamic acid","type":"exact"},{"name":"1-amidated L-glutamic acid","type":"exact"},{"name":"4,5-diamino-5-oxopentanoic acid","type":"exact"},{"name":"GluN","type":"exact"},{"name":"L-glutamic acid 1-amide","type":"exact"},{"name":"MOD_RES Glutamic acid 1-amide","type":"exact"},{"name":"isoglutamine","type":"exact"}],"termid":"MOD:00096"}


id: PATO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the degree of the bearer's  highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamentation","termid":"PATO:0002440"}


id: PBO:0069494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 761, pseudogene","termid":"PBO:0069494"}


id: GO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NADP+ = cholesta-5,7-dien-3-beta-ol + NADPH + H+.","definition_xrefs":["EC:1.3.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"7-dehydrocholesterol reductase activity","secondary_identifiers":["Reactome:R-HSA-196402","Reactome:R-HSA-6807055","RHEA:23984","MetaCyc:RXN66-323"],"synonyms":[{"name":"7-DHC reductase activity","type":"related"},{"name":"cholesterol:NADP+ delta7-oxidoreductase activity","type":"related"},{"name":"sterol Delta(7)-reductase activity","type":"broad"},{"name":"sterol delta7-reductase activity","type":"related"}],"termid":"GO:0047598"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0084790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; may interact with ribosomes based on co-purification experiments; similar to E. coli and human mitochondrial S12 ribosomal proteins","termid":"PBO:0084790"}


id: GO:0010895
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89503],"is_not":false,"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of ergosterol biosynthetic process","termid":"GO:0032443"},{"relation_name":"is_a","term_name":"negative regulation of sterol biosynthetic process","termid":"GO:0106119"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010895","terms_by_termid":{"GO:0010895":null}}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["PubMed:7944406","RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: PBO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 52","termid":"PBO:0044363"}


id: PBO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X (predicted)","termid":"PBO:0005798"}


id: PBO:0047733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 2","termid":"PBO:0047733"}


id: GO:0140820
data:
  {"annotated_genes":["SJAG_00328","SJAG_03528","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[74148,99740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the Golgi apparatus of a cell.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01960":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cytosol to Golgi apparatus transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0140820","terms_by_termid":{"GO:0036085":null,"GO:1904257":null}}


id: PBO:0048645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 5","termid":"PBO:0048645"}


id: PBO:0012564
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae Hys2","termid":"PBO:0012564"}


id: PBO:0087156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAH-box family; functions in both RNA polymerase I and polymerase II transcript metabolism; catalyzes removal of U2, U5, and U6 snRNPs from the postsplicing lariat-intron ribonucleoprotein complex; required for efficient biogenesis of both small- and large-subunit rRNAs; acts with Sqs1p to promote 20S to 18S rRNA processing catalyzed by endonuclease Nob1p","termid":"PBO:0087156"}


id: GO:1903502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of translation repressor activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","GOC:bhm","PMID:14723848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"translation repressor complex","termid":"GO:1903502"}


id: PBO:0049718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 4","termid":"PBO:0049718"}


id: GO:0099146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic density membrane (obsolete GO:0099146)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0099146"}


id: GO:1990452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex containing Parkin (PARK2), the F-box protein FBXW7 (also called SEL-10) and a cullin from the Cul1 subfamily; substrate specificity is conferred by the F-box protein.","definition_xrefs":["PMID:12628165","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Parkin-FBXW7-Cul1 ubiquitin ligase complex","synonyms":[{"name":"PRKN-FBXW7-Cul1 complex","type":"exact"},{"name":"Park2-FBXW7-Cul1 complex","type":"exact"},{"name":"Parkin-FBXW7-Cul1 protein complex","type":"exact"},{"name":"Parkin-HSel-10-Cullin-1 complex","type":"narrow"},{"name":"Parkin/Cul1/F-box protein complex","type":"exact"}],"termid":"GO:1990452"}


id: GO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"brain development","termid":"GO:0007420"},{"relation_name":"part_of","term_name":"rostrocaudal neural tube patterning","termid":"GO:0021903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary development","synonyms":[{"name":"MHB development","type":"exact"},{"name":"isthmic organizer development","type":"exact"},{"name":"isthmomesencephalic boundary development","type":"exact"},{"name":"isthmus development","type":"exact"},{"name":"midbrain-hindbrain orgainizer development","type":"exact"}],"termid":"GO:0030917"}


id: MOD:00395
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioester bond between a cysteine thiol and either an alpha-carbonyl, as in S-(L-methionyl-L-cysteine), or a sidechain carbonyl, as in S-(L-isoglutamyl)-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioester crosslinked residues","termid":"MOD:00395"}


id: PBO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding involved in ER to Golgi vesicle transport (predicted)","termid":"PBO:0005121"}


id: PBO:0003588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein complex assembly protein (predicted)","termid":"PBO:0003588"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: GO:0070986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the left/right axis. The left/right axis is defined by a line that runs orthogonal to both the anterior/posterior and dorsal/ventral axes. Each side is defined from the viewpoint of the organism rather of the observer (as per anatomical axes).","definition_xrefs":["GOC:gvg","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"left/right pattern formation","termid":"GO:0060972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"left/right axis specification","synonyms":[{"name":"left-right axis specification","type":"exact"},{"name":"left/right axis determination","type":"related"}],"termid":"GO:0070986"}


id: GO:0050034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnofuranose + NAD+ = L-rhamnono-1,4-lactone + H+ + NADH.","definition_xrefs":["RHEA:12649","EC:1.1.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-rhamnose 1-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03942","MetaCyc:L-RHAMNOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"L-rhamnofuranose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050034"}


id: FYPO:0003732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable respiratory chain complex IV in the mitochondria.","definition_xrefs":["PMID:16911509","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex IV absent from cell","synonyms":[{"name":"absent mitochondrial respiratory chain complex IV","type":"exact"},{"name":"mitochondrial respiratory chain complex IV absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondrial respiratory chain complex IV absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003732"}


id: PBO:0057754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1913","termid":"PBO:0057754"}


id: PBO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36/L42","termid":"PBO:0002195"}


id: PBO:0059781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 7","termid":"PBO:0059781"}


id: PR:O14047
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 26 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.14c","secondary_identifiers":["UniProtKB:O14047"],"synonyms":[{"name":"Spom972h-STK26","type":"exact"}],"termid":"PR:O14047"}


id: GO:1902109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of mitochondrial membrane permeability that is involved in apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis","GOC:pm","PMID:19168129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial membrane permeability","termid":"GO:0035795"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0007005"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic process","synonyms":[{"name":"mitochondrial membrane impermeability involved in apoptosis","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic cell death","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic process","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic program","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic programmed cell death","type":"related"},{"name":"mitochondrial membrane impermeability involved in programmed cell death by apoptosis","type":"related"},{"name":"mitochondrial membrane impermeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane impermeability involved in type I programmed cell death","type":"related"},{"name":"mitochondrial membrane impermeabilization involved in apoptosis","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic cell death","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic process","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic program","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in programmed cell death by apoptosis","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane impermeabilization involved in type I programmed cell death","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptosis","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic cell death","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic program","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic programmed cell death","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"negative regulation of mitochondrial membrane permeability involved in type I programmed cell death","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptosis","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic cell death","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic process","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic program","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic programmed cell death","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in signaling (initiator) caspase activity","type":"related"},{"name":"negative regulation of transport across mitochondrial membrane involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902109"}


id: PBO:0073985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 5","termid":"PBO:0073985"}


id: PBO:0045636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 48 (pseudogene)","termid":"PBO:0045636"}


id: GO:1904128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in somitogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:dph","PMID:24892953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in axis elongation","termid":"GO:1901233"},{"relation_name":"is_a","term_name":"negative regulation of convergent extension involved in gastrulation","termid":"GO:1904104"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in somitogenesis","termid":"GO:1904127"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in somitogenesis","termid":"GO:0090246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in somitogenesis","synonyms":[{"name":"down regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"down-regulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"downregulation of convergent extension involved in somitogenesis","type":"exact"},{"name":"inhibition of convergent extension involved in somitogenesis","type":"narrow"}],"termid":"GO:1904128"}


id: PBO:0054633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2038","termid":"PBO:0054633"}


id: GO:2001040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to drug.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to drug","termid":"GO:2001025"},{"relation_name":"is_a","term_name":"regulation of cellular response to drug","termid":"GO:2001038"},{"relation_name":"positively_regulates","term_name":"cellular response to xenobiotic stimulus","termid":"GO:0071466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to drug","termid":"GO:2001040"}


id: GO:0034894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxypyridine + O2 + H+ + NADPH = pyridine-3,4-diol + H2O + NADP+.","definition_xrefs":["UM-BBD_reactionID:r1397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxypyridine-3-hydroxylase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0034894"}


id: FYPO:0002654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which exocytic vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"enlarged exocytic vesicles","synonyms":[{"name":"enlarged exocytic vesicles during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0002654"}


id: GO:0072245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a metanephric glomerular parietal epithelial cell. Metanephric glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"},{"relation_name":"is_a","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular parietal epithelial cell differentiation","termid":"GO:0072245"}


id: PBO:0011132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 6","termid":"PBO:0011132"}


id: GO:0048208
data:
  {"annotated_genes":["SJAG_00906","SJAG_00284","SJAG_04615"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91101],"is_not":false,"summary":null,"term":"GO:0048208"},{"annotations":[64727,71471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:ascb_2009","GOC:jid","GOC:mah","GOC:tb","GOC:dph","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"vesicle targeting, rough ER to cis-Golgi","termid":"GO:0048207"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPII vesicle coating","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"COPII coating of ER-derived vesicle","type":"exact"},{"name":"COPII vesicle coat assembly","type":"exact"},{"name":"COPII vesicle coat formation","type":"exact"}],"termid":"GO:0048208","terms_by_termid":{"GO:0003400":null,"GO:0048208":null}}


id: PBO:0059409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35","termid":"PBO:0059409"}


id: PBO:0089367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Asr1","termid":"PBO:0089367"}


id: PBO:0089628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase","termid":"PBO:0089628"}


id: PR:O74834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A uracil-DNA glycosylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11264:SF0","PRO:DNx","OMA:SCHPO04380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.06","secondary_identifiers":["UniProtKB:O74834"],"synonyms":[{"name":"Spom972h-UNG","type":"exact"},{"name":"UDG (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74834"}


id: GO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the innate immune response of the symbiont organism; the innate immune response is the symbiont's first line of defense against infection. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont innate immunity (obsolete GO:0052383)","synonyms":[{"name":"activation by organism of symbiont innate immune response","type":"exact"},{"name":"activation by organism of symbiont innate immunity","type":"exact"},{"name":"induction by organism of symbiont innate immune response","type":"exact"},{"name":"induction by organism of symbiont innate immunity","type":"exact"}],"termid":"GO:0052383"}


id: PBO:0029680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_telomeres","termid":"PBO:0029680"}


id: PR:Q9P5N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.02","synonyms":[{"name":"Spom972h-alr2","type":"exact"}],"termid":"PR:Q9P5N3"}


id: GO:0032549
data:
  {"annotated_genes":["SJAG_03578","SJAG_00637","SJAG_04410","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89713,93697,108369],"is_not":false,"summary":null,"term":"GO:0032549"},{"annotations":[110845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a ribonucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked to ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_03578":null,"SJAG_04030":null,"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032549","terms_by_termid":{"GO:0032549":null,"GO:1905108":null}}


id: PBO:0036114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0036114"}


id: PBO:0027351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved,_elongated,_multinucleate_multiseptate_vegetative_cell","termid":"PBO:0027351"}


id: GO:2001125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"negatively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translational frameshifting","termid":"GO:2001125"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["PMID:9530499","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0038023","GO:0003824","GO:0016740","GO:0003674","GO:0140096","GO:0016301","GO:0004672"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: GO:0006820
data:
  {"annotated_genes":["SJAG_00877","SJAG_00547","SJAG_02463","SJAG_00048","SJAG_01168","SJAG_00671","SJAG_01183","SJAG_01973","SJAG_01033","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84186,90204,100039,106234,107957],"is_not":false,"summary":null,"term":"GO:0006820"},{"annotations":[70537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[108964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"},{"annotations":[65938,85227,61802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098656"}]},"cv_name":"biological_process","definition":"The directed movement of a monoatomic anion, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic anions (also called simple anions) are negatively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00547":null,"SJAG_00671":null,"SJAG_00877":null,"SJAG_01033":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"monoatomic anion transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006822"],"synonyms":[{"name":"anion transport","type":"broad"}],"termid":"GO:0006820","terms_by_termid":{"GO:0006820":null,"GO:0098656":null,"GO:0140116":null,"GO:1902476":null}}


id: FYPO:0000284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitosis phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes unequal mitotic sister chromatid segregation, and as a result the nucleus divides unequally to produce one daughter nucleus that is larger than the other.","definition_xrefs":["PomBase:mah","PMID:8769419","PomBase:vw","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large and small daughter nuclei","termid":"FYPO:0006715"},{"relation_name":"output_of","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0002403","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation","synonyms":[{"name":"complete but unequal mitotic sister chromatid segregation forming large and small daughter nuclei","type":"exact"},{"name":"large and small daughter nuclei resulting from unequal mitotic sister chromatid segregation","type":"related"},{"name":"large and small daughter nuclei, with complete but unequal mitotic sister chromatid segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic chromosome segregation","type":"exact"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during mitotic cell cycle","type":"related"},{"name":"large and small daughter nuclei, with unequal mitotic sister chromatid segregation, during vegetative growth","type":"exact"}],"termid":"FYPO:0000284"}


id: PR:Q9P6Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.10","synonyms":[{"name":"Spom972h-med11","type":"exact"},{"name":"mediator complex subunit 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q0"}


id: PBO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocilin","termid":"PBO:0060355"}


id: PBO:0085224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Para-aminobenzoate (PABA) synthase; has similarity to Escherichia coli PABA synthase components PabA and PabB; required for the synthesis of para-aminobenzoic acid, an important intermediate for folate and ubiquinone Q biosynthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0085224"}


id: SO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a mitochondria.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"mitochondrial_sequence","termid":"SO:0000737"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_chromosome","synonyms":[{"name":"mitochondrial chromosome","type":"exact"}],"termid":"SO:0000819"}


id: GO:1904377
data:
  {"annotated_genes":["SJAG_00030","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"positively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein localization to cell periphery","type":"narrow"},{"name":"up regulation of protein localization to cell periphery","type":"exact"},{"name":"up-regulation of protein localization to cell periphery","type":"exact"},{"name":"upregulation of protein localization to cell periphery","type":"exact"}],"termid":"GO:1904377","terms_by_termid":{"GO:0120047":null,"GO:1903078":null}}


id: FYPO:0001201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to calcium ion starvation","synonyms":[{"name":"decreased growth during cellular response to calcium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to calcium ion starvation","type":"exact"},{"name":"hypersensitive to calcium ion starvation","type":"exact"},{"name":"reduced growth in low calcium","type":"related"},{"name":"sensitive to calcium ion depletion","type":"exact"},{"name":"sensitive to calcium ion deprivation","type":"exact"},{"name":"sensitive to calcium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to calcium starvation","type":"exact"}],"termid":"FYPO:0001201"}


id: PBO:0046292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 2","termid":"PBO:0046292"}


id: GO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage at the terminal bond of the motif: Asp-Xaa-Xaa-Asp-Xaa. Enzymes with this function are members of the peptidase family C14 and they appear to function in the inactivation of proteins involved in cellular repair and homeostasis during the effector stage of apoptosis.","definition_xrefs":["ISBN:0120793709"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-3 activity (obsolete GO:0004208)","synonyms":[{"name":"caspase-3 activity","type":"exact"}],"termid":"GO:0004208"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: PBO:0108548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin adaptor End4","termid":"PBO:0108548"}


id: PATO:0002089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's body containing more than one cyst - formations of an epithelium bounded cavity not associated with neoplasia.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic","termid":"PATO:0001673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic","synonyms":[{"name":"multicystic","type":"exact"}],"termid":"PATO:0002089"}


id: GO:0022840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"leak channel activity","termid":"GO:0022840"}


id: PATO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a bearer by virtue of what the bearer receives as a result of being exposed to ionizing radiation.","definition_xrefs":["hps:hps"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation exposure","termid":"PATO:0001744"}


id: FYPO:0004879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at the centromere central core.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding at centromere central core","termid":"FYPO:0004879"}


id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: GO:0075227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an encysted zoospore germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore germination","termid":"GO:1904359"},{"relation_name":"regulates","term_name":"encysted zoospore germination","termid":"GO:0075226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of encysted zoospore germination","synonyms":[{"name":"modulation of encysted zoospore germination on or near host","type":"exact"},{"name":"regulation of encysted zoospore germination on or near host","type":"narrow"}],"termid":"GO:0075227"}


id: GO:1905074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:rl","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of tight junction disassembly","termid":"GO:1905073"},{"relation_name":"negatively_regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tight junction disassembly","synonyms":[{"name":"down regulation of occluding cell junction disassembly","type":"exact"},{"name":"down regulation of tight junction disassembly","type":"exact"},{"name":"down-regulation of occluding cell junction disassembly","type":"exact"},{"name":"down-regulation of tight junction disassembly","type":"exact"},{"name":"downregulation of occluding cell junction disassembly","type":"exact"},{"name":"downregulation of occluding junction disassembly","type":"exact"},{"name":"downregulation of tight junction disassembly","type":"exact"},{"name":"inhibition of occluding cell junction disassembly","type":"narrow"},{"name":"inhibition of occluding junction disassembly","type":"narrow"},{"name":"inhibition of tight junction disassembly","type":"narrow"},{"name":"negative regulation of occluding cell junction disassembly","type":"exact"}],"termid":"GO:1905074"}


id: PBO:0062687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 8 pseudogene","termid":"PBO:0062687"}


id: PBO:0031167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_import_during_vegetative_growth","termid":"PBO:0031167"}


id: FYPO:0007026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional modification of a guanosine residue in a tRNA molecule to form wybutosine occurs to a lower extent than normal.","definition_xrefs":["PMID:25404562","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA modification","termid":"FYPO:0000372"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased tRNA wybutosine biosynthesis","synonyms":[{"name":"decreased tRNA wybutosine biosynthesis during mitotic cell cycle","type":"related"},{"name":"decreased tRNA wybutosine biosynthesis during vegetative growth","type":"exact"},{"name":"decreased tRNA wybutosine biosynthetic process","type":"exact"},{"name":"decreased tRNA wybutosine formation","type":"exact"},{"name":"decreased tRNA yW formation","type":"exact"},{"name":"decreased wybutosine level in tRNA","type":"related"},{"name":"reduced tRNA wybutosine biosynthesis","type":"exact"}],"termid":"FYPO:0007026"}


id: SO:1000184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant affecting splicing and causes an exon loss.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000184 sequence_variant_causes_exon_loss (obsolete SO:1000184)","synonyms":[{"name":"mutation causes exon loss","type":"related"},{"name":"sequence variant causes exon loss","type":"exact"}],"termid":"SO:1000184"}


id: MOD:00921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"New uncategorized Unimod. OBSOLETE because organizational use is no longer required.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00921 new uncategorized Unimod entries (obsolete MOD:00921)","termid":"MOD:00921"}


id: PBO:0003759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z15","termid":"PBO:0003759"}


id: PBO:0067367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 468, pseudogene","termid":"PBO:0067367"}


id: FYPO:0004867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced histone H2A phosphorylation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004867"}


id: GO:0002614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"},{"relation_name":"negatively_regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte antigen processing and presentation","synonyms":[{"name":"down regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"down-regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"downregulation of monocyte antigen processing and presentation","type":"exact"},{"name":"inhibition of monocyte antigen processing and presentation","type":"narrow"}],"termid":"GO:0002614"}


id: PBO:0059266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L32","termid":"PBO:0059266"}


id: GO:0097157
data:
  {"annotated_genes":["SJAG_03383","SJAG_04497","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75459,96396,113204],"is_not":false,"summary":null,"term":"GO:0097157"}]},"cv_name":"molecular_function","definition":"Binding to an intronic sequence of a pre-messenger RNA (pre-mRNA).","definition_xrefs":["GOC:ans","PMID:16260624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02622":null,"SJAG_03383":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pre-mRNA intronic binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pre-messenger RNA intronic binding","type":"exact"}],"termid":"GO:0097157","terms_by_termid":{"GO:0097157":null}}


id: FYPO:0007258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic spindle pole body duplication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal meiotic spindle pole body duplication","synonyms":[{"name":"abnormal meiotic SPB duplication","type":"exact"},{"name":"abnormal spindle pole body duplication during meiotic cell cycle","type":"related"}],"termid":"FYPO:0007258"}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: FYPO:0004558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has an abnormal morphology, and in which actin cortical patch localization is abnormal.","definition_xrefs":["PomBase:mah","PMID:9765059"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000138","FYPO:0000004","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","synonyms":[{"name":"inviable after spore germination, undivided cell, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal F-actin patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localisation","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin patch localization","type":"exact"},{"name":"inviable following spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"}],"termid":"FYPO:0004558"}


id: GO:0019540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a siderophore from other compounds, including catechol. Catechol is one of the three major chemical groups incorporated into siderophore structures with hydroxamate and a-hydroxycarboxylate, each having a high selectivity for iron(3+).","definition_xrefs":["PMID:20376388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"catechol-containing siderophore biosynthetic process","secondary_identifiers":["GO:0031190","GO:0031189"],"termid":"GO:0019540"}


id: PBO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium_export","termid":"PBO:0030483"}


id: GO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"is_a","term_name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"},{"relation_name":"positively_regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chylomicron remnant clearance","termid":"GO:0090321"}


id: GO:0097585
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt3p.","definition_xrefs":["PMID:12551906","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005789","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt3p dimer complex","synonyms":[{"name":"Pmt5p-Pmt3p complex","type":"narrow"}],"termid":"GO:0097585"}


