# terms

id: FYPO:0001023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cisplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on cisplatin","synonyms":[{"name":"normal cell population growth in presence of cisplatin","type":"exact"},{"name":"normal cell population growth on cisplatin","type":"exact"},{"name":"normal cellular response to cisplatin","type":"related"},{"name":"normal growth on cis-DDP","type":"exact"},{"name":"normal vegetative cell population growth on cisplatin","type":"exact"}],"termid":"FYPO:0001023"}


id: GO:0052387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont apoptosis (obsolete GO:0052387)","synonyms":[{"name":"activation by organism of symbiont apoptosis","type":"exact"},{"name":"activation by organism of symbiont apoptotic programmed cell death","type":"exact"},{"name":"induction by organism of symbiont apoptosis","type":"exact"},{"name":"induction by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052387"}


id: PBO:0041808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 19","termid":"PBO:0041808"}


id: GO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via an ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","termid":"GO:0019885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","synonyms":[{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"}],"termid":"GO:0002484"}


id: GO:0021975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in the pons towards target cells in the spinal cord.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons reticulospinal tract morphogenesis","termid":"GO:0021975"}


id: GO:0048658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anther wall tapetum over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:sm","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum development","synonyms":[{"name":"tapetal layer development","type":"broad"},{"name":"tapetum development","type":"broad"}],"termid":"GO:0048658"}


id: PBO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member A","termid":"PBO:0047193"}


id: PBO:0046670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-related receptor alpha pseudogene 2","termid":"PBO:0046670"}


id: PBO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.-.-","termid":"PBO:0005079"}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: GO:0046211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-camphor, a bicyclic monoterpene ketone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"(+)-camphor metabolic process","termid":"GO:0018882"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(+)-camphor biosynthetic process","synonyms":[{"name":"(+)-camphor anabolism","type":"exact"},{"name":"(+)-camphor biosynthesis","type":"exact"},{"name":"(+)-camphor formation","type":"exact"},{"name":"(+)-camphor synthesis","type":"exact"}],"termid":"GO:0046211"}


id: FYPO:0000881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000881"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["GOC:mtg_sensu","PMID:7729583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: PBO:0072265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 3","termid":"PBO:0072265"}


id: GO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of tyramine to form octopamine.","definition_xrefs":["PMID:10745161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tyramine-beta hydroxylase activity","termid":"GO:0004836"}


id: GO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"negatively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye photoreceptor cell development","synonyms":[{"name":"down regulation of eye photoreceptor cell development","type":"exact"},{"name":"down-regulation of eye photoreceptor cell development","type":"exact"},{"name":"downregulation of eye photoreceptor cell development","type":"exact"},{"name":"inhibition of eye photoreceptor cell development","type":"narrow"},{"name":"negative regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042480"}


id: GO:0060756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior by which an organism locates food.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"foraging behavior","termid":"GO:0060756"}


id: PBO:0013804
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HUT1","termid":"PBO:0013804"}


id: PBO:0039599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B","termid":"PBO:0039599"}


id: FYPO:0001200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to calcium starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to calcium starvation","synonyms":[{"name":"abnormal cellular response to calcium depletion","type":"exact"},{"name":"abnormal cellular response to calcium deprivation","type":"exact"},{"name":"abnormal cellular response to calcium ion starvation","type":"exact"},{"name":"abnormal cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001200"}


id: PBO:0084251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol 1,3,4,5,6-pentakisphosphate 2-kinase; nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable; human IPPK can complement ipk1 null mutant","termid":"PBO:0084251"}


id: GO:0010888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"negative regulation of lipid localization","termid":"GO:1905953"},{"relation_name":"negatively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid storage","termid":"GO:0010888"}


id: GO:0033927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltohexaose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.98"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltohexaosidase activity","secondary_identifiers":["MetaCyc:3.2.1.98-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltohexaohydrolase activity","type":"related"},{"name":"G6-amylase activity","type":"related"},{"name":"exo-maltohexaohydrolase activity","type":"related"},{"name":"maltohexaose-producing amylase activity","type":"related"}],"termid":"GO:0033927"}


id: GO:0034125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of MyD88-dependent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of toll-like receptor signaling pathway","termid":"GO:0034122"},{"relation_name":"is_a","term_name":"regulation of MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0034124"},{"relation_name":"negatively_regulates","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of MyD88-dependent toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of MyD88-dependent TLR signaling pathway","type":"exact"},{"name":"negative regulation of MyD88-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034125"}


id: PBO:0081410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 260","termid":"PBO:0081410"}


id: GO:0004549
data:
  {"annotated_genes":["SJAG_01623","SJAG_06613","SJAG_04916","SJAG_00955","SJAG_04582","SJAG_03796","SJAG_02553","SJAG_03234","SJAG_04907","SJAG_00306","SJAG_00754","SJAG_03328","SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110482,92360,90315,100186,113661,97515,71274,99975,108714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[71582,112784,77717,72607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphodiester bonds in tRNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01260":null,"SJAG_01623":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0140101","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"tRNA-specific ribonuclease activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5696815","Reactome:R-HSA-6785722","Reactome:R-HSA-6786854","Reactome:R-HSA-5696813"],"synonyms":[{"name":"tRNA-specific RNase activity","type":"exact"}],"termid":"GO:0004549","terms_by_termid":{"GO:0000213":null,"GO:0004526":null}}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: PBO:0041065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3","termid":"PBO:0041065"}


id: PBO:0088378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40","termid":"PBO:0088378"}


id: GO:0090295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:rb","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"},{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription","termid":"GO:0090293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription","synonyms":[{"name":"negative regulation of transcription by nitrogen catabolites","type":"exact"},{"name":"nitrogen catabolite repression","type":"exact"}],"termid":"GO:0090295"}


id: PBO:0027150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_serine_level","termid":"PBO:0027150"}


id: PBO:0087217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-AdoMet-dependent methyltransferase involved in lipid homeostasis; mediates resistance to a drug cantharidin","termid":"PBO:0087217"}


id: GO:1902273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"negatively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"down regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"down-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"downregulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"inhibition of (R)-carnitine transmembrane transport","type":"narrow"}],"termid":"GO:1902273"}


id: PBO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gap1","termid":"PBO:0003396"}


id: PBO:0084518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response; homologous to worm Y62E10A.10/EMC-3, fly CG6750, human TMEM111","termid":"PBO:0084518"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: SO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic variable region which closely resembles a known functional imunoglobulin variable gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the variable region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_pseudogene","synonyms":[{"name":"IG V pseudogene","type":"exact"},{"name":"IG variable pseudogene","type":"exact"},{"name":"IG_variable_pseudogene","type":"exact"},{"name":"Immunoglobulin variable pseudogene","type":"exact"},{"name":"Immunoglobulin_variable_pseudogene","type":"exact"}],"termid":"SO:0002102"}


id: PBO:0053604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 636","termid":"PBO:0053604"}


id: PBO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein Mug157","termid":"PBO:0002600"}


id: PBO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 18","termid":"PBO:0072392"}


id: GO:0070087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chromo shadow domain, a protein domain that is distantly related, and found in association with, the chromo domain.","definition_xrefs":["GOC:vk","PMID:7667093","GOC:BHF","InterPro:IPR008251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"chromo shadow domain binding","synonyms":[{"name":"chromoshadow domain binding","type":"exact"}],"termid":"GO:0070087"}


id: GO:0106185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 37 of the histone.","definition_xrefs":["GOC:mah","PMID:30773398"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K37 methylation (obsolete GO:0106185)","synonyms":[{"name":"histone H3 K37 methylation","type":"exact"},{"name":"histone H3K37me","type":"exact"},{"name":"histone lysine H3 K37 methylation","type":"exact"}],"termid":"GO:0106185"}


id: GO:0046490
data:
  {"annotated_genes":["SJAG_03349","SJAG_02380","SJAG_04307","SJAG_01474","SJAG_03715","SJAG_01187","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[73923,78584,76135,110098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[110643,106632],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01474":null,"SJAG_02380":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"IPP metabolic process","type":"exact"},{"name":"IPP metabolism","type":"exact"},{"name":"isopentenyl diphosphate metabolism","type":"exact"},{"name":"isopentenyl pyrophosphate metabolic process","type":"exact"},{"name":"isopentenyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0046490","terms_by_termid":{"GO:0009240":null,"GO:0019287":null,"GO:2001211":null}}


id: PR:O74823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red5 gene.","definition_xrefs":["UniProtKB:O74823","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH domain-containing protein C337.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.12","synonyms":[{"name":"Spom972h-red5","type":"exact"}],"termid":"PR:O74823"}


id: GO:0106348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a adenosine in U2 snRNA + S-adenosyl-L-methionine = an N6-methyl-adenosine in U2 snRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:32637152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"U2 snRNA adenosine m6 methytransferase activity","termid":"GO:0106348"}


id: GO:1902758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GOC:dph","GO_REF:0000068","PMID:23201473","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","termid":"GO:1902757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5964","GO:0061600"],"synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum anabolism","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum biosynthesis","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum formation","type":"exact"},{"name":"bis(molybdopterin guanine dinucleotide)molybdenum synthesis","type":"exact"},{"name":"bis-Mo-molybdopterin-guanine dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902758"}


id: PBO:0047175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 8","termid":"PBO:0047175"}


id: GO:0038059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex containing two IkappaB kinase (IKK) alpha subunits.","definition_xrefs":["GOC:bf","PMID:18626576","PMID:21173796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IKKalpha-IKKalpha complex","synonyms":[{"name":"IKKalpha homodimer","type":"exact"},{"name":"IKKalpha homodimeric complex","type":"exact"},{"name":"IKKalpha-IKKalpha protein complex","type":"exact"},{"name":"IkappaB kinase alpha homodimer","type":"exact"},{"name":"IkappaB kinase-alpha homodimer","type":"exact"}],"termid":"GO:0038059"}


id: GO:0042448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"progesterone metabolic process","synonyms":[{"name":"progesterone metabolism","type":"exact"}],"termid":"GO:0042448"}


id: GO:0072700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inorganic substance","termid":"GO:0010035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bismuth","synonyms":[{"name":"response to bismuth ion","type":"exact"}],"termid":"GO:0072700"}


id: GO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-amidino-L-aspartate + H2O = L-aspartate + urea.","definition_xrefs":["EC:3.5.3.14","RHEA:14849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"amidinoaspartase activity","secondary_identifiers":["MetaCyc:AMIDINOASPARTASE-RXN","KEGG_REACTION:R00777"],"synonyms":[{"name":"N-amidino-L-aspartate amidinohydrolase activity","type":"related"},{"name":"amidinoaspartic amidinohydrolase activity","type":"related"}],"termid":"GO:0047660"}


id: PBO:0089590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin Puc1","termid":"PBO:0089590"}


id: GO:0047869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S,S-dimethyl-beta-propiothetin = acrylate + dimethyl sulfide + H+.","definition_xrefs":["EC:4.4.1.3","RHEA:19965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"dimethylpropiothetin dethiomethylase activity","secondary_identifiers":["KEGG_REACTION:R02574","MetaCyc:DIMETHYLPROPIOTHETIN-DETHIOMETHYLASE-RXN"],"synonyms":[{"name":"S,S-dimethyl-beta-propiothetin dimethyl-sulfide-lyase (acrylate-forming)","type":"related"},{"name":"S,S-dimethyl-beta-propiothetin dimethyl-sulfide-lyase activity","type":"related"},{"name":"desulfhydrase activity","type":"related"}],"termid":"GO:0047869"}


id: FYPO:0006376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype in which the observed occurrence of protein processing is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:25803873","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein processing during nitrogen starvation","synonyms":[{"name":"decreased protein cleavage during nitrogen starvation","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during nitrogen starvation","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during nitrogen starvation","type":"exact"},{"name":"decreased protein processing during nitrogen depletion","type":"exact"},{"name":"decreased protein processing during nitrogen deprivation","type":"exact"},{"name":"reduced protein processing during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006376"}


id: GO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-A RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-A RNA polymerase activity (obsolete GO:0001062)","termid":"GO:0001062"}


id: PBO:0072805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 1","termid":"PBO:0072805"}


id: PBO:0063657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 2","termid":"PBO:0063657"}


id: PBO:0056583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter dominant negative subunit beta","termid":"PBO:0056583"}


id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["ChEBI:64723","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77035],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0003824","GO:0016740","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0070128","MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","GO:0001718","Reactome:R-HSA-5389841","RHEA:24380"],"synonyms":[{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: PR:Q09812
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg22 gene.","definition_xrefs":["UniProtKB:Q09812","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.13","synonyms":[{"name":"Spom972h-atg22","type":"exact"}],"termid":"PR:Q09812"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: GO:0060945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron differentiation","synonyms":[{"name":"heart neuron differentiation","type":"exact"}],"termid":"GO:0060945"}


id: PR:O74948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIA subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10966:SF0","PRO:DNx","OMA:SCHPO04252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIA subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.11c","secondary_identifiers":["UniProtKB:O74948"],"synonyms":[{"name":"Spom972h-GTF2A2","type":"exact"},{"name":"general transcription factor IIA subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor IIA small chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74948"}


id: PBO:0001212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane transporter (predicted)","termid":"PBO:0001212"}


id: SO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a protein coding gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_variant","synonyms":[{"name":"Jannovar:coding_transcript_variant","type":"exact"},{"name":"coding transcript variant","type":"exact"}],"termid":"SO:0001968"}


id: GO:0018899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1,2-dichloroethane, a major commodity chemical used, for example, in the manufacture of vinyl chloride.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2-dichloroethane metabolic process","secondary_identifiers":["UM-BBD_pathwayID:dce"],"synonyms":[{"name":"1,2-dichloroethane metabolism","type":"exact"}],"termid":"GO:0018899"}


id: PBO:0041068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 1","termid":"PBO:0041068"}


id: PBO:0027816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_uracil_nitrogen_source","termid":"PBO:0027816"}


id: GO:0042379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chemokine receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine receptor binding","synonyms":[{"name":"chemokine receptor ligand","type":"narrow"}],"termid":"GO:0042379"}


id: PBO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Cft1","termid":"PBO:0090030"}


id: PBO:0087424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit A of the V1 peripheral membrane domain of V-ATPase; protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI), which is a site-specific endonuclease; the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits; involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0087424"}


id: FYPO:0003536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal in a population in stationary phase. The septation index is the proportion of the population undergoing septation at any given time.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septation index","termid":"FYPO:0000650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index in stationary phase","synonyms":[{"name":"increased septation in stationary phase","type":"related"},{"name":"increased septation index during stationary phase","type":"exact"},{"name":"septated in stationary phase","type":"related"}],"termid":"FYPO:0003536"}


id: FYECO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfide (Na2S) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2S","synonyms":[{"name":"sodium sulfide added","type":"exact"}],"termid":"FYECO:0000165"}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: PR:O59737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp1 gene.","definition_xrefs":["UniProtKB:O59737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.01","synonyms":[{"name":"GAP for ypt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gyp1","type":"exact"}],"termid":"PR:O59737"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: PBO:0039752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 3","termid":"PBO:0039752"}


id: FYPO:0003924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured at arrested replication forks in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage at stalled replication fork","synonyms":[{"name":"increased DNA damage at arrested replication fork","type":"exact"},{"name":"increased DNA damage at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"increased DNA damage at stalled replication fork during vegetative growth","type":"exact"},{"name":"increased number of DNA lesions at stalled replication forks during vegetative growth","type":"related"}],"termid":"FYPO:0003924"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: MOD:00953
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and an L-serine residue by an ester bond and releasing water to form O-(L-isoglutamyl)-L-serine.","definition_xrefs":["DeltaMass:0","PubMed:19035375","RESID:AA0597#ESX"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-serine","termid":"MOD:01977"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-serine (Glu-Ser)","synonyms":[{"name":"(2S)-2-amino-5-[(2S)-2-amino-2-carboxyethoxy]-5-oxopentanoic acid","type":"exact"},{"name":"CROSSLNK isoglutamyl serine ester (Ser-Glu)","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)serine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-serine","type":"exact"},{"name":"O-gamma-Glutamyl- (Crosslink to Serine)","type":"exact"},{"name":"O3-(isoglutamyl)-serine","type":"exact"}],"termid":"MOD:00953"}


id: PBO:0078656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 9-1","termid":"PBO:0078656"}


id: PBO:0043788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylation element binding protein 1","termid":"PBO:0043788"}


id: PATO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000854 contact righting reflex value (obsolete PATO:0000854)","termid":"PATO:0000854"}


id: PBO:0059393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S26","termid":"PBO:0059393"}


id: PBO:0055232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2659","termid":"PBO:0055232"}


id: PBO:0011168
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galacose specific flocculation","termid":"PBO:0011168"}


id: GO:0102180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NADH + O2 + H+ = 4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + 2 H2O.","definition_xrefs":["RHEA:59036","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11936"],"termid":"GO:0102180"}


id: GO:0034006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = amorpha-4,11-diene + diphosphate.","definition_xrefs":["RHEA:18325","EC:4.2.3.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"amorpha-4,11-diene synthase activity","secondary_identifiers":["MetaCyc:RXN-8046","KEGG_REACTION:R07630"],"synonyms":[{"name":"2-trans,6-trans-farnesyl-diphosphate diphosphate-lyase (amorpha-4,11-diene-forming) activity","type":"related"},{"name":"amorphadiene synthase activity","type":"related"}],"termid":"GO:0034006"}


id: MOD:01360
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to the 4-sulfophenyl isothiocyanate adduct, N6-[(4-sulfophenyl)carbamothioyl]lysine.","definition_xrefs":["PubMed:14745769","Unimod:261#K","PubMed:14689565","PubMed:15549660","PubMed:16526082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00584"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-sulfophenyl isothiocyanate N6-derivatized lysine","synonyms":[{"name":"4-sulfophenyl isothiocyanate","type":"related"},{"name":"N6-[(4-sulfophenyl)carbamothioyl]lysine","type":"exact"},{"name":"SPITC","type":"related"}],"termid":"MOD:01360"}


id: PBO:0048437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1","termid":"PBO:0048437"}


id: SO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 25S_rRNA, which functions as a component of the large subunit of the ribosome in some eukaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_25S_gene","synonyms":[{"name":"25S rRNA gene","type":"exact"},{"name":"25S_rRNA_gene","type":"exact"}],"termid":"SO:0002242"}


id: GO:0016039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reception of a (UV light) photon by a cell, UV light being defined as having a wavelength within the range 13.6-400 nm.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light absorption","termid":"GO:0016037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"absorption of UV light","termid":"GO:0016039"}


id: GO:0003825
data:
  {"annotated_genes":["SJAG_00182","SJAG_01531","SJAG_01646","SJAG_00129","SJAG_01862","SJAG_01427"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73587,74010,75260,77772,78042,78492],"is_not":false,"summary":null,"term":"GO:0003825"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + D-glucose-6-phosphate = UDP + alpha,alpha-trehalose-6-phosphate.","definition_xrefs":["EC:2.4.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:TREHALOSE6PSYN-RXN","RHEA:18889"],"synonyms":[{"name":"UDP-glucose-glucose-phosphate glucosyltransferase activity","type":"exact"},{"name":"UDP-glucose-glucosephosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"exact"},{"name":"UDPglucose-glucose-phosphate glucosyltransferase activity","type":"related"},{"name":"UDPglucose:D-glucose-6-phosphate 1-alpha-D-glucosyltransferase activity","type":"related"},{"name":"alpha,alpha-trehalose phosphate synthase (UDP-forming)","type":"related"},{"name":"phosphotrehalose-uridine diphosphate transglucosylase activity","type":"related"},{"name":"transglucosylase activity","type":"exact"},{"name":"trehalose 6-phosphate synthase activity","type":"exact"},{"name":"trehalose 6-phosphate synthetase activity","type":"exact"},{"name":"trehalose phosphate synthase activity","type":"related"},{"name":"trehalose phosphate synthetase activity","type":"related"},{"name":"trehalose phosphate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"trehalose-P synthetase activity","type":"related"},{"name":"trehalose-phosphate synthase activity","type":"exact"},{"name":"trehalose-phosphate synthetase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyl transferase activity","type":"exact"},{"name":"trehalosephosphate-UDP glucosyltransferase activity","type":"exact"},{"name":"uridine diphosphoglucose phosphate glucosyltransferase activity","type":"related"}],"termid":"GO:0003825","terms_by_termid":{"GO:0003825":null}}


id: PATO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000100 soil composition sensitivity (obsolete PATO:0000100)","termid":"PATO:0000100"}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_01461","SJAG_00635","SJAG_03398","SJAG_04546","SJAG_01592","SJAG_00636","SJAG_01019","SJAG_00043","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106434],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[77346,98064,70577,113457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[70669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[113459,72220,75843,93702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[75031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03398":null,"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null,"GO:0019547":null,"GO:0033387":null,"GO:0042450":null}}


id: SO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in symbiosis, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiosis_island","synonyms":[{"name":"symbiosis island","type":"exact"}],"termid":"SO:0000776"}


id: SOFP:orf_classification
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"gene call confidence flag","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf_classification","termid":"SOFP:orf_classification"}


id: GO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: PATO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000540 flooding sensitivity value (obsolete PATO:0000540)","termid":"PATO:0000540"}


id: PBO:0076294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse differentiation inducing 1","termid":"PBO:0076294"}


id: GO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PSII associated light-harvesting complex II.","definition_xrefs":["PMID:17400553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II binding","termid":"GO:0062066"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PBO:0046508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 3","termid":"PBO:0046508"}


id: GO:0016109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tetraterpenoid biosynthetic process","synonyms":[{"name":"tetraterpene biosynthesis","type":"narrow"},{"name":"tetraterpene biosynthetic process","type":"narrow"},{"name":"tetraterpenoid anabolism","type":"exact"},{"name":"tetraterpenoid biosynthesis","type":"exact"},{"name":"tetraterpenoid formation","type":"exact"},{"name":"tetraterpenoid synthesis","type":"exact"}],"termid":"GO:0016109"}


id: FYPO:0000926
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal volume vegetative cell","synonyms":[{"name":"normal volume cells during vegetative growth","type":"exact"},{"name":"normal volume vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000926"}


id: GO:0047864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylaniline N-oxide = N-methylaniline + formaldehyde.","definition_xrefs":["EC:4.1.2.24","RHEA:19321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dimethylaniline-N-oxide aldolase activity","secondary_identifiers":["MetaCyc:DIMETHYLANILINE-N-OXIDE-ALDOLASE-RXN","KEGG_REACTION:R03345"],"synonyms":[{"name":"N,N-dimethylaniline-N-oxide formaldehyde-lyase (N-methylaniline-forming)","type":"related"},{"name":"N,N-dimethylaniline-N-oxide formaldehyde-lyase activity","type":"related"},{"name":"microsomal N-oxide dealkylase activity","type":"related"},{"name":"microsomal oxidase II","type":"related"}],"termid":"GO:0047864"}


id: PBO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.1","termid":"PBO:0003143"}


id: GO:0010447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH < 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acidic pH","synonyms":[{"name":"response to acidity","type":"broad"}],"termid":"GO:0010447"}


id: GO:1900183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"regulation of xanthone biosynthesis","type":"narrow"},{"name":"regulation of xanthone biosynthetic process","type":"narrow"},{"name":"regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"regulation of xanthone-containing compound formation","type":"exact"},{"name":"regulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900183"}


id: PBO:0070958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 13","termid":"PBO:0070958"}


id: SO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that does not affect protein function. Silent mutations may occur in genic ( CDS, UTR, intron etc) and intergenic regions. Silent mutations may have affects on processes such as splicing and regulation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silent_mutation","secondary_identifiers":["loinc:LA6700-4","http://en.wikipedia.org/wiki/Silent_mutation"],"synonyms":[{"name":"silent mutation","type":"exact"}],"termid":"SO:0001017"}


id: PR:O74382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoserine phosphatase SerB that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03036","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.07c","secondary_identifiers":["UniProtKB:O74382"],"synonyms":[{"name":"O-phosphoserine phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PSP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PSPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-serB","type":"exact"}],"termid":"PR:O74382"}


id: GO:0070474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle contraction","synonyms":[{"name":"activation of uterine smooth muscle contraction","type":"narrow"},{"name":"positive regulation of myometrial contraction","type":"exact"},{"name":"positive regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"positive regulation of myometrium contraction","type":"exact"},{"name":"stimulation of uterine smooth muscle contraction","type":"narrow"},{"name":"up regulation of uterine smooth muscle contraction","type":"exact"},{"name":"up-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"upregulation of uterine smooth muscle contraction","type":"exact"}],"termid":"GO:0070474"}


id: PBO:0006231
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this transcript could be on either strand","termid":"PBO:0006231"}


id: PBO:0064927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 regulatory subunit 1","termid":"PBO:0064927"}


id: GO:0097639
data:
  {"annotated_genes":["SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95853],"is_not":false,"summary":null,"term":"GO:0097639"}]},"cv_name":"biological_process","definition":"The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-lysine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903410"],"synonyms":[{"name":"L-lysine import into cell","type":"exact"}],"termid":"GO:0097639","terms_by_termid":{"GO:0097639":null}}


id: GO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of cAMP-mediated signal transduction in the symbiont organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont cAMP-mediated signal transduction (obsolete GO:0075206)","synonyms":[{"name":"positive regulation by host of symbiont cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075206"}


id: GO:0036427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + GDP-alpha-D-mannose = D-mannosyl undecaprenyl phosphate + GDP.","definition_xrefs":["RHEA:28118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0047267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"all-trans-undecaprenyl-phosphate mannosyltransferase activity","termid":"GO:0036427"}


id: GO:0018293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a linkage between a protein amino acid and flavin-adenine dinucleotide (FAD).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-FAD linkage","termid":"GO:0018293"}


id: PBO:0004268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic phosphate transporter (predicted)","termid":"PBO:0004268"}


id: GO:0051463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"negatively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cortisol secretion","synonyms":[{"name":"down regulation of cortisol secretion","type":"exact"},{"name":"down-regulation of cortisol secretion","type":"exact"},{"name":"downregulation of cortisol secretion","type":"exact"},{"name":"inhibition of cortisol secretion","type":"narrow"}],"termid":"GO:0051463"}


id: PBO:0057275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 498","termid":"PBO:0057275"}


id: PBO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 1","termid":"PBO:0050020"}


id: GO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of T cell receptor signaling pathway","synonyms":[{"name":"regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"regulation of T-cell receptor signalling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050856"}


id: PBO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1 pseudogene 3","termid":"PBO:0072706"}


id: PBO:0048983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 11","termid":"PBO:0048983"}


id: GO:0006367
data:
  {"annotated_genes":["SJAG_03573","SJAG_01808","SJAG_02872","SJAG_02314","SJAG_07011","SJAG_03033","SJAG_00641","SJAG_02846","SJAG_05341","SJAG_03944","SJAG_00904","SJAG_00095","SJAG_02981","SJAG_02170","SJAG_05192","SJAG_01207","SJAG_02849","SJAG_00739","SJAG_02906","SJAG_02798","SJAG_02466","SJAG_01403","SJAG_00743","SJAG_01653","SJAG_03590","SJAG_00872","SJAG_00150","SJAG_01513","SJAG_03776","SJAG_00421","SJAG_02391","SJAG_01111","SJAG_03145","SJAG_02066","SJAG_03441","SJAG_00441","SJAG_04820","SJAG_03839","SJAG_00896","SJAG_04614","SJAG_00087","SJAG_01622","SJAG_02385","SJAG_03622","SJAG_04977","SJAG_03061","SJAG_00995","SJAG_03285","SJAG_01523","SJAG_02869","SJAG_01475","SJAG_04368","SJAG_04576","SJAG_02541","SJAG_00581","SJAG_01707","SJAG_04420","SJAG_00758","SJAG_02174","SJAG_04005","SJAG_03694","SJAG_02768","SJAG_00913","SJAG_01711","SJAG_00909","SJAG_02927","SJAG_00769","SJAG_00159","SJAG_04894","SJAG_03206","SJAG_00914","SJAG_00584","SJAG_04917","SJAG_00045","SJAG_00650","SJAG_04852","SJAG_03107","SJAG_03095","SJAG_04097","SJAG_03618","SJAG_02494","SJAG_00746","SJAG_01765","SJAG_00349","SJAG_01465","SJAG_04038","SJAG_02303","SJAG_02549","SJAG_03787","SJAG_01016","SJAG_03752","SJAG_02571","SJAG_03758","SJAG_01771","SJAG_01325","SJAG_04099","SJAG_00512","SJAG_05203","SJAG_00184","SJAG_02589","SJAG_00297","SJAG_02551","SJAG_04205","SJAG_00873","SJAG_00901","SJAG_01658","SJAG_00741","SJAG_05313","SJAG_04030","SJAG_01952","SJAG_03668","SJAG_00116","SJAG_04758","SJAG_04561","SJAG_01436","SJAG_04654","SJAG_03576","SJAG_00119","SJAG_04213","SJAG_02101","SJAG_02691","SJAG_02447","SJAG_03579","SJAG_02773","SJAG_02329","SJAG_00440","SJAG_00925","SJAG_00868","SJAG_01110","SJAG_01713","SJAG_04194","SJAG_03431","SJAG_04705","SJAG_04989","SJAG_02458","SJAG_04613","SJAG_01611","SJAG_00735","SJAG_02254","SJAG_02500","SJAG_01710","SJAG_03211","SJAG_03900","SJAG_03884","SJAG_04755","SJAG_03599","SJAG_04647","SJAG_01804","SJAG_04596","SJAG_04274","SJAG_00540","SJAG_05020","SJAG_00342","SJAG_01230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72625,75474,77616,77744,78756,78900,85612,85971,87682,87811,89530,89710,91162,92380,95714,98584,100855,100897,103043,103063,103245,103820,104311,107339,108201,109441,110025,110173,110326],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[101622,101754,113981,91445,85436,89950,83248,94557,86380,98842,90966,104079,97424,94208,104051,109925,99110,90059,110473,86079,104360,101432],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060261"},{"annotations":[89759,73984,71932,85630,71372,67460,75964,70756,65046,103833,83181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051123"},{"annotations":[111691,112718,103048,86394,89918,98793,90246,89821,98551,108361,110566,83765,108540,89736,91059,97043,102120,94200,103236,101016,99980,89794,94907,105763,108209,109912,102689,93778,108042,110860,92016,85519,89406,89750,100418,91468,104892,83940,88430,108379,104114,105897,110200,112672,83597,94667,87937,110553,96462,87072,111449,103799,104788,98226,109520,89766,94040,111512,86293,84623,112649,102272,109435,91472,110434,104668,107007,102799,83452,100410,112387,98991,112565,101160,91034,84118,84259,109446,92651,92222,86408,107791,109605,93372,85024,104108,85788,104392,112043,84858,89138,89633],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045815"},{"annotations":[70243],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001113"}]},"cv_name":"biological_process","definition":"A transcription initiation process that takes place at a RNA polymerase II gene promoter. Messenger RNAs (mRNA) genes, as well as some non-coding RNAs, are transcribed by RNA polymerase II.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":154,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00184":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00421":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00512":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00650":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00741":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00758":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00995":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01207":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01523":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01707":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01771":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02101":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02691":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03061":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03145":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03285":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04561":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04820":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription initiation at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"transcription initiation from Pol II promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006367","terms_by_termid":{"GO:0001113":null,"GO:0006367":null,"GO:0045815":null,"GO:0051123":null,"GO:0060261":null}}


id: GO:0009947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the centrolateral axis. In plants, this axis is duplicated and runs from the midrib to the margin of the leaf.","definition_xrefs":["GOC:dsz","GOC:tb","ISBN:0865427429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"centrolateral pattern formation","termid":"GO:0097353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"centrolateral axis specification","synonyms":[{"name":"centrolateral axis determination","type":"related"},{"name":"mediolateral axis specification","type":"exact"}],"termid":"GO:0009947"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: GO:0032195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:23494323","PMID:9394012","GOC:pf","PMID:9276759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"post-lysosomal vacuole","synonyms":[{"name":"post-lysosome","type":"exact"},{"name":"postlysosome","type":"exact"}],"termid":"GO:0032195"}


id: PBO:0055547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2983","termid":"PBO:0055547"}


id: GO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}


id: GO:2000916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"negative regulation of xylan catabolic process","termid":"GO:2001001"},{"relation_name":"negatively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of glucuronoxylan catabolic process","synonyms":[{"name":"negative regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000916"}


id: PBO:0040728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCLAF1 and THRAP3 family member 3","termid":"PBO:0040728"}


id: PBO:0068224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 531","termid":"PBO:0068224"}


id: FYPO:0000699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-7-methylguanine glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-7-methylguanine glycosylase activity","termid":"FYPO:0000697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished DNA-7-methylguanine glycosylase activity","synonyms":[{"name":"DNA-7-methylguanine glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0000699"}


id: GO:0150015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree, which emerges near the apical pole of a neuron, and which is the closest to the cell body of the neuron (the soma).","definition_xrefs":["GOC:bc","PMID:9214543","GOC:aruk","PMID:1720142","PMID:16899232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical dendrite","termid":"GO:0097440"},{"relation_name":"is_a","term_name":"proximal dendrite","termid":"GO:1990635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical proximal dendrite","termid":"GO:0150015"}


id: PBO:0028749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_morphology","termid":"PBO:0028749"}


id: PBO:0013786
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha1,2-Mannosyltransferase Homolog","termid":"PBO:0013786"}


id: FYPO:0004229
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth during cellular response to ionizing radiation","synonyms":[{"name":"normal cell population growth during cellular response to IR","type":"exact"},{"name":"normal cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"normal cellular response to ionizing radiation","type":"related"},{"name":"normal sensitivity to ionizing radiation","type":"related"},{"name":"normal vegetative cell population growth during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004229"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24892953","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: PR:P41891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gar2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein gar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.02","synonyms":[{"name":"Spom972h-gar2","type":"exact"}],"termid":"PR:P41891"}


id: PATO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a short and stout cylindrical shape.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peg-like","termid":"PATO:0002535"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: FYPO:0005908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is lower than normal (i.e. lower than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of cellular response to stress gene mRNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"decreased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"decreased stress responsive gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of stress responsive gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005908"}


id: PBO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh3","termid":"PBO:0002810"}


id: PR:O74849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght6 gene.","definition_xrefs":["UniProtKB:O74849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity fructose transporter ght6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.13","synonyms":[{"name":"Spom972h-ght6","type":"exact"},{"name":"hexose transporter 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74849"}


id: GO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threonine (or D-allo-threonine) = glycine + acetaldehyde.","definition_xrefs":["PMID:9642221","MetaCyc:4.1.2.42-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-threonine aldolase activity","secondary_identifiers":["EC:4.1.2.42","RHEA:15257"],"synonyms":[{"name":"D-TA","type":"exact"},{"name":"D-allo-TA","type":"exact"},{"name":"D-allo-threonine aldolase activity","type":"exact"},{"name":"DtaAS","type":"related"},{"name":"low-specificity D-threonine aldolase","type":"narrow"}],"termid":"GO:0043876"}


id: GO:0048505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:bf","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of cell differentiation","synonyms":[{"name":"timing of cell differentiation","type":"related"}],"termid":"GO:0048505"}


id: PBO:0090907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101","termid":"PBO:0090907"}


id: PATO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000092 abiotic stress sensitivity (obsolete PATO:0000092)","termid":"PATO:0000092"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: GO:0019238
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156","SJAG_02400","SJAG_04711","SJAG_04681","SJAG_00376","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003934"},{"annotations":[96634,83266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003935"},{"annotations":[70140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003937"},{"annotations":[75057,75717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004477"},{"annotations":[103220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004635"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2, in a reaction that involves the opening of a ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00376":null,"SJAG_02400":null,"SJAG_03275":null,"SJAG_04156":null,"SJAG_04681":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0019238","terms_by_termid":{"GO:0003934":null,"GO:0003935":null,"GO:0003937":null,"GO:0004477":null,"GO:0004635":null}}


id: GO:0120261
data:
  {"annotated_genes":["SJAG_01867","SJAG_02622","SJAG_02990","SJAG_01599","SJAG_01511","SJAG_04369","SJAG_04574","SJAG_03255","SJAG_03664","SJAG_02381","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[103826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[76343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061186"},{"annotations":[94494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[94103,86501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[112853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[95794,113197,87518,92751,105773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02381":null,"SJAG_02622":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0120261","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:1902801":null}}


id: PBO:0077490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 210","termid":"PBO:0077490"}


id: GO:1904333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000058","PMID:22761594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of error-prone translesion synthesis","synonyms":[{"name":"activation of error-prone postreplication DNA repair","type":"related"},{"name":"activation of error-prone translesion synthesis","type":"narrow"},{"name":"activation of mutagenic PRR","type":"narrow"},{"name":"activation of mutagenic postreplication DNA repair","type":"related"},{"name":"positive regulation of error-prone postreplication DNA repair","type":"related"},{"name":"positive regulation of mutagenic PRR","type":"exact"},{"name":"positive regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up regulation of error-prone translesion synthesis","type":"exact"},{"name":"up regulation of mutagenic PRR","type":"exact"},{"name":"up regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"up-regulation of error-prone translesion synthesis","type":"exact"},{"name":"up-regulation of mutagenic PRR","type":"exact"},{"name":"up-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone postreplication DNA repair","type":"related"},{"name":"upregulation of error-prone translesion synthesis","type":"exact"},{"name":"upregulation of mutagenic PRR","type":"exact"},{"name":"upregulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904333"}


id: PBO:0051073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5/OR15-5A (non-functional)","termid":"PBO:0051073"}


id: GO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ecdysteroid catabolic process","synonyms":[{"name":"ecdysteroid breakdown","type":"exact"},{"name":"ecdysteroid catabolism","type":"exact"},{"name":"ecdysteroid degradation","type":"exact"}],"termid":"GO:0046344"}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: GO:0033425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"CAU codon-amino acid adaptor activity","synonyms":[{"name":"CAT codon-amino acid adaptor activity","type":"exact"},{"name":"histidine tRNA","type":"related"}],"termid":"GO:0033425"}


id: PBO:0086324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to Kre9p; Kre9p is involved in cell wall beta 1,6-glucan synthesis; overproduction suppresses growth defects of a kre9 null mutant; required for propionic acid resistance","termid":"PBO:0086324"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: PR:O74533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04865","PANTHER:PTHR12022:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.02c","secondary_identifiers":["UniProtKB:O74533"],"synonyms":[{"name":"Spom972h-UQCRB","type":"exact"},{"name":"complex III subunit 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex 14 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74533"}


id: PBO:0087801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; substrate of the phosphatase calcineurin; interacts with homolog Frt2p; promotes cell growth in stress conditions, possibly via a role in posttranslational translocation; FRT1 has a paralog, FRT2, that arose from the whole genome duplication","termid":"PBO:0087801"}


id: PBO:0059474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3 pseudogene 1","termid":"PBO:0059474"}


id: GO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:dgh","GO_REF:0000021","ISBN:0838580343","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons development","termid":"GO:0021548"}


id: PBO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs2 (predicted)","termid":"PBO:0017496"}


id: GO:1990403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the brain over time, from its formation to the mature structure.","definition_xrefs":["PMID:15918910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic brain development","termid":"GO:1990403"}


id: PBO:0044140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 6","termid":"PBO:0044140"}


id: PR:O13981
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc1 gene.","definition_xrefs":["UniProtKB:O13981","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.07","synonyms":[{"name":"Spom972h-emc1","type":"exact"}],"termid":"PR:O13981"}


id: PBO:0082672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the dynactin complex; localized to the pointed end of the Arp1p filament; may regulate membrane association of the complex","termid":"PBO:0082672"}


id: GO:0031591
data:
  {"annotated_genes":["SJAG_04265","SJAG_01261","SJAG_04735","SJAG_05334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72138,73418,74254,90304],"is_not":false,"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["RNAmods:037","GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"},{"relation_name":"is_a","term_name":"wybutosine metabolic process","termid":"GO:0031590"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01261":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"wybutosine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"yW biosynthesis","type":"exact"},{"name":"yW biosynthetic process","type":"exact"}],"termid":"GO:0031591","terms_by_termid":{"GO:0031591":null}}


id: PBO:0017882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine diphosphate-N-acetylglucosamine transmembrane transporter Hut1","termid":"PBO:0017882"}


id: PBO:0081438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 287","termid":"PBO:0081438"}


id: PBO:0067043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 62, pseudogene","termid":"PBO:0067043"}


id: PBO:0088409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorelay sensor kinase Mak1","termid":"PBO:0088409"}


id: PBO:0000979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0000979"}


id: PBO:0080011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 13","termid":"PBO:0080011"}


id: PBO:0040251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 7","termid":"PBO:0040251"}


id: GO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086038"}


id: PBO:0066109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 1","termid":"PBO:0066109"}


id: PBO:0044849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131D (pseudogene)","termid":"PBO:0044849"}


id: GO:0046077
data:
  {"annotated_genes":["SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dUDP metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"dUDP metabolism","type":"exact"}],"termid":"GO:0046077","terms_by_termid":{"GO:0006227":null}}


id: PBO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1 interacting factor 1, autophagy protein","termid":"PBO:0001649"}


id: GO:0061968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the asymmetry in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of left/right asymmetry","termid":"GO:0061968"}


id: PBO:0058995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLX interacting protein","termid":"PBO:0058995"}


id: GO:0052396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates programmed cell death in the symbiont, where programmed cell death proceeds by a non-apoptotic pathway. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont non-apoptotic programmed cell death (obsolete GO:0052396)","synonyms":[{"name":"activation by organism of symbiont non-apoptotic programmed cell death","type":"exact"},{"name":"induction by organism of symbiont non-apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052396"}


id: FYPO:0003986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular amino acid level","synonyms":[{"name":"increased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular amino acid level during vegetative growth","type":"exact"}],"termid":"FYPO:0003986"}


id: PBO:0068881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 121, pseudogene","termid":"PBO:0068881"}


id: GO:0071628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a fungal-type vacuole membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of fungal-type vacuolar membrane (obsolete GO:0071628)","termid":"GO:0071628"}


id: PBO:0072996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 4","termid":"PBO:0072996"}


id: PBO:0054919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2333","termid":"PBO:0054919"}


id: GO:1900473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8056324"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900473)","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900473"}


id: FYPO:0003729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nuclear periphery is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"protein mislocalized to nuclear periphery","synonyms":[{"name":"ectopic protein localization to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery","type":"exact"},{"name":"protein mislocalised to nuclear periphery during vegetative growth","type":"exact"},{"name":"protein mislocalized to nuclear periphery during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003729"}


id: GO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a frizzled (fz) receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"frizzled binding","secondary_identifiers":["GO:0005110"],"synonyms":[{"name":"frizzled ligand","type":"narrow"},{"name":"frizzled-2 binding","type":"narrow"},{"name":"frizzled-2 ligand","type":"narrow"},{"name":"fz binding","type":"exact"},{"name":"fz ligand","type":"narrow"},{"name":"fz2 binding","type":"narrow"},{"name":"fz2 ligand","type":"narrow"}],"termid":"GO:0005109"}


id: GO:1900204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric collecting duct development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:17314325","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric collecting duct development","termid":"GO:0072205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900204"}


id: PBO:0083437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOL036W","termid":"PBO:0083437"}


id: GO:0080145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of cysteine within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular amino acid homeostasis","termid":"GO:0080144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular cysteine homeostasis","synonyms":[{"name":"cellular cysteine homeostasis","type":"exact"},{"name":"cysteine homeostasis","type":"exact"}],"termid":"GO:0080145"}


id: GO:0021564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve development","synonyms":[{"name":"CN X development","type":"related"},{"name":"cranial nerve 10 development","type":"related"},{"name":"cranial nerve X development","type":"exact"}],"termid":"GO:0021564"}


id: GO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.","definition_xrefs":["GOC:lr","PO_REF:00009","ISBN:9781405139830","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dormancy process","secondary_identifiers":["Wikipedia:Seed#Seed_dormancy_and_protection"],"synonyms":[{"name":"seed dormancy","type":"related"}],"termid":"GO:0010162"}


id: PBO:0067672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 853, pseudogene","termid":"PBO:0067672"}


id: PBO:0070358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 31","termid":"PBO:0070358"}


id: PBO:0052802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 42, pseudogene","termid":"PBO:0052802"}


id: GO:0060009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a Sertoli cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a Sertoli cell fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"Sertoli cell differentiation","termid":"GO:0060008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell development","termid":"GO:0060009"}


id: GO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-glucuronate, the D-enantiomer of glucuronate, from one side of a membrane to the other.","definition_xrefs":["GOC:mah","ISBN:0815340729","GOC:jl","ISBN:0198506732","GOC:jsg","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"D-glucuronate transmembrane transporter activity","termid":"GO:0042880"}


id: MOD:00333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to (3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine.","definition_xrefs":["PubMed:7835418","RESID:AA0328","Unimod:437#C-term","PubMed:8183363","PubMed:7559516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine","synonyms":[{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5'-adenosine","type":"exact"},{"name":"(3-aminopropyl)(L-aspartyl-1-amino)phosphoryl-5-adenosine","type":"related"},{"name":"5'-O-[(3-aminopropoxy)(L-aspart-1-ylamino)phosphoryl]adenosine","type":"exact"},{"name":"9-(5'-O-[(3-aminopropoxy)(L-aspart-1-ylamino)phosphoryl]-beta-D-ribofuranosyl)adenine","type":"exact"},{"name":"C-Asn-deriv","type":"related"},{"name":"MOD_RES Aspartic acid 1-[(3-aminopropyl)(5'-adenosyl)phosphono]amide","type":"exact"},{"name":"N-(aspart-1-yl)-O-(3-aminopropyl)-O-(5'-adenosyl)phosphoramide","type":"exact"},{"name":"microcin C7 asparagine modification","type":"exact"}],"termid":"MOD:00333"}


id: PBO:0068889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 130, pseudogene","termid":"PBO:0068889"}


id: GO:0060962
data:
  {"annotated_genes":["SJAG_03241","SJAG_02671","SJAG_01243"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83745,85199,89121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes mediated by RNA polymerase II.","definition_xrefs":["GOC:tb","GOC:txnOH","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01243":null,"SJAG_02671":null,"SJAG_03241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of ribosomal protein gene transcription by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ribosomal protein gene transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060962","terms_by_termid":{"GO:0060963":null}}


id: GO:0006405
data:
  {"annotated_genes":["SJAG_02661","SJAG_01534","SJAG_01715","SJAG_00641","SJAG_03156","SJAG_04310","SJAG_04379","SJAG_03283","SJAG_01185","SJAG_04721","SJAG_04536","SJAG_04622","SJAG_04472","SJAG_02534","SJAG_02274","SJAG_04589","SJAG_04202","SJAG_00093","SJAG_03847","SJAG_00178","SJAG_01374","SJAG_03693","SJAG_04645","SJAG_03729","SJAG_03986","SJAG_00992","SJAG_01449","SJAG_00375","SJAG_01652","SJAG_01065","SJAG_03299","SJAG_02704","SJAG_04148","SJAG_02757","SJAG_02520","SJAG_05243","SJAG_01529","SJAG_03300","SJAG_04347","SJAG_04656","SJAG_04480","SJAG_03002","SJAG_04115","SJAG_05328","SJAG_04083","SJAG_01013","SJAG_01083","SJAG_04017","SJAG_00298","SJAG_00471","SJAG_01717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74545,75020,75606,78713,89611,91706,100451],"is_not":false,"summary":null,"term":"GO:0006405"},{"annotations":[72684,85218,72451,112379,92662,110708,75937,78624,73766,96637,76542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[71378,72789,87654,97431,111475,104024,107004,105717,73967,113975,111219,102996,92105,109665,96877,99378,74902,106384,113109,73673,97331,92511,73232,110960,78840,105165,101649,87830,98093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[77389,100664,72018,101137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[78277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"},{"relation_name":"is_a","term_name":"nuclear export","termid":"GO:0051168"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_01717":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05243":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"RNA export from nucleus","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"RNA export from cell nucleus","type":"exact"},{"name":"RNA export out of nucleus","type":"exact"},{"name":"RNA transport from nucleus to cytoplasm","type":"exact"},{"name":"RNA-nucleus export","type":"exact"}],"termid":"GO:0006405","terms_by_termid":{"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016973":null,"GO:0071528":null}}


id: GO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"blastocyst formation","termid":"GO:0001825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell differentiation","synonyms":[{"name":"trophectoderm cell differentiation","type":"exact"}],"termid":"GO:0001829"}


id: GO:0102732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1L-myo-inositol 1,2,3,4,6-pentakisphosphate(10-) + ATP = H+ + myo-inositol hexakisphosphate(12-) + ADP.","definition_xrefs":["GOC:pz","EC:2.7.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"myo-inositol-1,2,3,4,6-heptakisphosphate 5-kinase activity","secondary_identifiers":["MetaCyc:RXN-7186"],"termid":"GO:0102732"}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: PBO:0059018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 7","termid":"PBO:0059018"}


id: PBO:0066656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3 pseudogene 1","termid":"PBO:0066656"}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: PBO:0026753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_re-entry_into_mitotic_cell_cycle_after_arrest_in_response_to_hydroxyurea","termid":"PBO:0026753"}


id: GO:0010168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A novel compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae species.","definition_xrefs":["PMID:11577182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ER body","synonyms":[{"name":"endoplasmic reticulum body","type":"exact"}],"termid":"GO:0010168"}


id: GO:0060997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"},{"relation_name":"part_of","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine morphogenesis","termid":"GO:0060997"}


id: PBO:0080466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 2","termid":"PBO:0080466"}


id: GO:0006783
data:
  {"annotated_genes":["SJAG_03173","SJAG_01155","SJAG_02896","SJAG_05283","SJAG_04944","SJAG_00097","SJAG_01841","SJAG_01372","SJAG_01192","SJAG_04109","SJAG_01786","SJAG_03961","SJAG_02876","SJAG_04397","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73949,100580,109101],"is_not":false,"summary":null,"term":"GO:0006783"},{"annotations":[77202,78597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[90045,112117,67705,78513,91942,86655,91359,87983],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[71531,75895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors.","definition_xrefs":["GOC:jl","PMID:11788607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"heme biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:HEMESYN2-PWY"],"synonyms":[{"name":"haem biosynthesis","type":"exact"},{"name":"haem biosynthetic process","type":"exact"},{"name":"heme anabolism","type":"exact"},{"name":"heme biosynthesis","type":"exact"},{"name":"heme formation","type":"exact"},{"name":"heme synthesis","type":"exact"}],"termid":"GO:0006783","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: GO:0016430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N6-methyladenine.","definition_xrefs":["EC:2.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0003824","GO:0003674","GO:0016741","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine-N6)-methyltransferase activity","secondary_identifiers":["RHEA:16785","MetaCyc:TRNA-ADENINE-N6--METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (adenine-6-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N6-)-methyltransferase activity","type":"related"},{"name":"tRNA (adenine-N6-)-methyltransferase activity","type":"exact"}],"termid":"GO:0016430"}


id: PBO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK cascade adaptor protein Ste4","termid":"PBO:0090096"}


id: PATO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000220 regeneration (obsolete PATO:0000220)","termid":"PATO:0000220"}


id: PBO:0029607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell","termid":"PBO:0029607"}


id: PBO:0049997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 3","termid":"PBO:0049997"}


id: GO:2001140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"positively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid transport","termid":"GO:2001140"}


id: GO:0075141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of a physiologic state in which the symbiont immune system does not react destructively against the components of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont tolerance to host environment (obsolete GO:0075141)","synonyms":[{"name":"maintenance of symbiont tolerance to host environment","type":"related"},{"name":"maintenance of symbiont tolerance to host iron concentration","type":"narrow"},{"name":"maintenance of symbiont tolerance to host osmotic environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host oxygen tension environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host pH environment","type":"narrow"},{"name":"maintenance of symbiont tolerance to host redox environment","type":"narrow"}],"termid":"GO:0075141"}


id: PBO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E1-like activator enzyme Rad31","termid":"PBO:0000832"}


id: MOD:01143
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues and the tetrapyrrole compound 15,16-dihydrobiliverdin.","definition_xrefs":["PubMed:3208761","PubMed:8420941","RESID:AA0429","PubMed:2222853","PubMed:1559975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15,16-dihydrobiliverdin-bis-L-cysteine","synonyms":[{"name":"(16R)-8,12-bis(2-carboxyethyl)-3-[2-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-18-[(1Xi)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-2,7,13,17-tetramethyl-15,16-dihydrobilin-1,19(21H,24H)-dione","type":"exact"},{"name":"15,16-Dhbv","type":"exact"},{"name":"15,16-dihydrobiliverdin IXalpha","type":"exact"},{"name":"15,16-dihydrobiliverdin cysteine adduct","type":"exact"},{"name":"15,16-dihydrobiliverdin-bis-L-cysteine","type":"exact"},{"name":"3'',18'-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"3beta,18alpha-biscysteinyl-15,16-dihydrobiliverdin","type":"exact"},{"name":"8,12-bis(2-carboxyethyl)-3-(2-(cysteinyl-S)-ethyl)-18-(1-(cysteinyl-S)-ethyl)-2,7,13,17-tetramethylbiladiene-ab-1,19(16H,21H)-dione","type":"exact"},{"name":"BINDING  15,16-dihydrobiliverdin (covalent; via 2 links)","type":"exact"},{"name":"DBV","type":"exact"}],"termid":"MOD:01143"}


id: PBO:0028919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription","termid":"PBO:0028919"}


id: GO:0071899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of estrogen receptor binding, interacting selectively with an estrogen receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of estrogen receptor binding (obsolete GO:0071899)","termid":"GO:0071899"}


id: PBO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034580"}


id: PBO:0029042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_6,7-dimethyl-8-ribityllumazine_synthase_activity","termid":"PBO:0029042"}


id: PBO:0063683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 7","termid":"PBO:0063683"}


id: PBO:0091343
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD9","termid":"PBO:0091343"}


id: GO:0070506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a high-density lipoprotein particle and delivering the high-density lipoprotein into the cell via endocytosis.","definition_xrefs":["PMID:9211901","GOC:rl","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"high-density lipoprotein particle receptor activity","synonyms":[{"name":"HDL receptor","type":"exact"},{"name":"high-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:0070506"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: MOD:00926
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Non-standard residue. OBSOLETE because not an amino acid modification. From Unimod not an approved entry.","definition_xrefs":["PubMed:11225353","Unimod:493"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00926 Bisphenol A diglycidyl ether derivative (obsolete MOD:00926)","synonyms":[{"name":"BADGE","type":"related"},{"name":"Bisphenol A diglycidyl ether derivative","type":"related"}],"termid":"MOD:00926"}


id: FYPO:0002601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone phosphorylation during vegetative growth","termid":"FYPO:0002595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002601"}


id: PBO:0029438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029438"}


id: GO:0034615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses GTP cyclohydrolase I activity. In E. coli and human, the complex is a homodecamer, and monomers are catalytically inactive.","definition_xrefs":["PMID:16696853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GCH1 complex","synonyms":[{"name":"GTP cyclohydrolase I complex","type":"exact"}],"termid":"GO:0034615"}


id: PBO:0036486
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the japonicus gene is about 500 amino acids longer...possibly a gene merge in japoinicus as this does not splice to adjacent gene","termid":"PBO:0036486"}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["PMID:10684581","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: PBO:0070010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1307, pseudogene","termid":"PBO:0070010"}


id: GO:0015110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyanate, NCO-, the anion of cyanic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyanate transmembrane transporter activity","termid":"GO:0015110"}


id: PBO:0078088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 5","termid":"PBO:0078088"}


id: PBO:0038384
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_connecting_branch","termid":"PBO:0038384"}


id: PBO:0070304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 10","termid":"PBO:0070304"}


id: GO:0004725
data:
  {"annotated_genes":["SJAG_02000","SJAG_00214","SJAG_00082","SJAG_01161","SJAG_04166","SJAG_04332","SJAG_01667","SJAG_03263","SJAG_02013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71886,72828,73262,100607,107599],"is_not":false,"summary":null,"term":"GO:0004725"},{"annotations":[71222,90629,87318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[83509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004726"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.","definition_xrefs":["EC:3.1.3.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00214":null,"SJAG_01161":null,"SJAG_01667":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_03263":null,"SJAG_04166":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0004721","GO:0003674","GO:0016788","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein tyrosine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-203797","Reactome:R-HSA-74748","Reactome:R-HSA-8864125","Reactome:R-HSA-6807027","Reactome:R-HSA-8864036","Reactome:R-HSA-9674816","Reactome:R-HSA-997311","Reactome:R-HSA-1549564","MetaCyc:PROTEIN-TYROSINE-PHOSPHATASE-RXN","Reactome:R-HSA-997314","Reactome:R-HSA-8863804","Reactome:R-HSA-8864029","Reactome:R-HSA-8867047","Reactome:R-HSA-8867658","Reactome:R-HSA-9603719","Reactome:R-HSA-391868","Reactome:R-HSA-445089","Reactome:R-HSA-5683967","Reactome:R-HSA-9701507","Reactome:R-HSA-389758","Reactome:R-HSA-8937767","Reactome:R-HSA-9635461","Reactome:R-HSA-997326","Reactome:R-HSA-9700200","Reactome:R-HSA-8852200","Reactome:R-HSA-1169188","Reactome:R-HSA-74747","Reactome:R-HSA-8855381","Reactome:R-HSA-9636439","Reactome:R-HSA-8849435","Reactome:R-HSA-377643","Reactome:R-HSA-1169210","Reactome:R-HSA-6807008","Reactome:R-HSA-877308","Reactome:R-HSA-914036","Reactome:R-HSA-9698408","Reactome:R-HSA-202214","Reactome:R-HSA-74733","Reactome:R-HSA-997309","Reactome:R-HSA-1169192","RHEA:10684"],"synonyms":[{"name":"PPT-phosphatase activity","type":"related"},{"name":"PTP-phosphatase activity","type":"related"},{"name":"PTPase activity","type":"related"},{"name":"[phosphotyrosine]protein phosphatase activity","type":"related"},{"name":"phosphoprotein phosphatase (phosphotyrosine) activity","type":"related"},{"name":"phosphotyrosine histone phosphatase activity","type":"related"},{"name":"phosphotyrosine phosphatase activity","type":"related"},{"name":"phosphotyrosine protein phosphatase activity","type":"related"},{"name":"phosphotyrosylprotein phosphatase activity","type":"related"},{"name":"protein phosphotyrosine phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphatase activity","type":"related"},{"name":"protein-tyrosine-phosphate phosphohydrolase activity","type":"related"},{"name":"tyrosine O-phosphate phosphatase activity","type":"related"},{"name":"tyrosylprotein phosphatase activity","type":"related"}],"termid":"GO:0004725","terms_by_termid":{"GO:0004725":null,"GO:0004726":null,"GO:0033550":null}}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["ChEBI:17750","PubMed:23978223","RESID:AA0619","PubMed:23818633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: PBO:0079573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 5","termid":"PBO:0079573"}


id: PBO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18","termid":"PBO:0072201"}


id: GO:0006661
data:
  {"annotated_genes":["SJAG_05327","SJAG_06383","SJAG_01570","SJAG_00068","SJAG_02776","SJAG_02903","SJAG_02289","SJAG_00296","SJAG_03115","SJAG_04924","SJAG_04545","SJAG_05278","SJAG_03878","SJAG_01227","SJAG_04881","SJAG_04165","SJAG_03506","SJAG_02523","SJAG_03672","SJAG_02913","SJAG_02804","SJAG_06425","SJAG_00999","SJAG_04119","SJAG_00063","SJAG_04975","SJAG_05219","SJAG_00831","SJAG_01876","SJAG_05330","SJAG_00846","SJAG_01236","SJAG_01416","SJAG_00295","SJAG_01863","SJAG_04930","SJAG_03292","SJAG_04537","SJAG_02488","SJAG_00114","SJAG_01571","SJAG_03801","SJAG_01860","SJAG_03066","SJAG_04337"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75749,78696,88256,95782],"is_not":false,"summary":null,"term":"GO:0006661"},{"annotations":[87056,109168,71097,74099,74089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[74915,76657,88619,111300,73049,72920,84676,74376,75618,70792,76809,85281,76360,70151,77206,99203,71328,106860,112354,109983,102093,75577,71844,76504,76505,74934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[106394,88839,86887,87496,92267,113531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[71388,61736,83524,63359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00999":null,"SJAG_01227":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["GO:0046489"],"synonyms":[{"name":"PtdIns biosynthesis","type":"exact"},{"name":"PtdIns biosynthetic process","type":"exact"},{"name":"phosphatidylinositol anabolism","type":"exact"},{"name":"phosphatidylinositol biosynthesis","type":"exact"},{"name":"phosphatidylinositol formation","type":"exact"},{"name":"phosphatidylinositol synthesis","type":"exact"},{"name":"phosphoinositide biosynthesis","type":"exact"},{"name":"phosphoinositide biosynthetic process","type":"exact"}],"termid":"GO:0006661","terms_by_termid":{"GO:0006506":null,"GO:0006661":null,"GO:0016255":null,"GO:0036092":null,"GO:0046854":null}}


id: PBO:0070557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 23","termid":"PBO:0070557"}


id: GO:0034716
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Gemin3 (DDX20), Gemin4, and Gemin5, and can bind to snRNAs; may be an intermediate in SMN complex assembly.","definition_xrefs":["GOC:mah","PMID:17640873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Gemin3-Gemin4-Gemin5 complex","termid":"GO:0034716"}


id: PBO:0080143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1","termid":"PBO:0080143"}


id: GO:0051626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"epinephrine uptake","termid":"GO:0051625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of epinephrine uptake","synonyms":[{"name":"regulation of adrenaline uptake","type":"exact"},{"name":"regulation of epinephrine import","type":"exact"}],"termid":"GO:0051626"}


id: PBO:0063963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pipecolic acid and sarcosine oxidase","termid":"PBO:0063963"}


id: PATO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000682 rate value (obsolete PATO:0000682)","termid":"PATO:0000682"}


id: PBO:0048686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioblastoma down-regulated RNA","termid":"PBO:0048686"}


id: PBO:0076832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component","termid":"PBO:0076832"}


id: GO:0003353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cilium movement","termid":"GO:0003341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium movement","secondary_identifiers":["GO:1900174"],"synonyms":[{"name":"positive regulation of flagellar movement","type":"related"},{"name":"positive regulation of flagellum movement","type":"related"},{"name":"positive regulation of microtubule-based flagellum movement","type":"exact"}],"termid":"GO:0003353"}


id: PBO:0092022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Histidine (gug), mitochondrial","termid":"PBO:0092022"}


id: GO:0015640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of peptidoglycan peptides from one side of a membrane to the other. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan transmembrane transporter activity","termid":"GO:0015647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"peptidoglycan peptide transmembrane transporter activity","synonyms":[{"name":"murein peptide transporter activity","type":"exact"},{"name":"muropeptide transporter activity","type":"exact"}],"termid":"GO:0015640"}


id: GO:0046951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Biosynthesis involves the formation of hydroxymethylglutaryl-CoA, which is cleaved to acetate and acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"cellular ketone body metabolic process","termid":"GO:0046950"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ketone body biosynthetic process","synonyms":[{"name":"ketone body anabolism","type":"exact"},{"name":"ketone body biosynthesis","type":"exact"},{"name":"ketone body formation","type":"exact"},{"name":"ketone body synthesis","type":"exact"}],"termid":"GO:0046951"}


id: GO:1905332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of morphogenesis of an epithelium.","definition_xrefs":["GO_REF:0000058","PMID:25745997","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"positively_regulates","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of morphogenesis of an epithelium","synonyms":[{"name":"up regulation of morphogenesis of an epithelium","type":"exact"},{"name":"activation of epithelium morphogenesis","type":"narrow"},{"name":"activation of morphogenesis of an epithelium","type":"narrow"},{"name":"positive regulation of epithelium morphogenesis","type":"exact"},{"name":"up regulation of epithelium morphogenesis","type":"exact"},{"name":"up-regulation of epithelium morphogenesis","type":"exact"},{"name":"up-regulation of morphogenesis of an epithelium","type":"exact"},{"name":"upregulation of epithelium morphogenesis","type":"exact"},{"name":"upregulation of morphogenesis of an epithelium","type":"exact"}],"termid":"GO:1905332"}


id: PBO:0031193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair","termid":"PBO:0031193"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: GO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + amine(out) = ADP + phosphate + amine(in).","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase-coupled amine transporter activity (obsolete GO:0031263)","synonyms":[{"name":"ATP-dependent amine transporter activity","type":"exact"},{"name":"amine ABC transporter","type":"narrow"},{"name":"amine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031263"}


id: PBO:0044240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cupin superfamily member 1, pseudogene","termid":"PBO:0044240"}


id: PBO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_bipolar_cell_growth","termid":"PBO:0030302"}


id: PBO:0073641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 28, pseudogene","termid":"PBO:0073641"}


id: PBO:0057949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3671","termid":"PBO:0057949"}


id: FYPO:0005785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a shorter time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased duration of protein-protein interaction","synonyms":[{"name":"decreased duration of protein binding","type":"exact"},{"name":"reduced duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005785"}


id: GO:0032687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-alpha production.","definition_xrefs":["PMID:15546383","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"regulation of interferon-alpha production","termid":"GO:0032647"},{"relation_name":"negatively_regulates","term_name":"interferon-alpha production","termid":"GO:0032607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interferon-alpha production","secondary_identifiers":["GO:1902740","GO:0045355"],"synonyms":[{"name":"down regulation of interferon-alpha production","type":"exact"},{"name":"down-regulation of interferon-alpha production","type":"exact"},{"name":"downregulation of interferon-alpha production","type":"exact"},{"name":"inhibition of interferon-alpha production","type":"narrow"},{"name":"negative regulation of interferon-alpha biosynthetic process","type":"narrow"},{"name":"negative regulation of interferon-alpha secretion","type":"narrow"}],"termid":"GO:0032687"}


id: PBO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 2, transcriptional regulator","termid":"PBO:0061698"}


id: GO:1904827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen sulfide biosynthetic process.","definition_xrefs":["GOC:rph","PMID:22034194","GO_REF:0000058","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of hydrogen sulfide biosynthetic process","termid":"GO:1904826"},{"relation_name":"negatively_regulates","term_name":"hydrogen sulfide biosynthetic process","termid":"GO:0070814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of hydrogen sulfide biosynthetic process","synonyms":[{"name":"down regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down regulation of hydrogen sulfide formation","type":"exact"},{"name":"down regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"down-regulation of hydrogen sulfide formation","type":"exact"},{"name":"down-regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"down-regulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide anabolism","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulfide biosynthetic process","type":"exact"},{"name":"downregulation of hydrogen sulfide formation","type":"exact"},{"name":"downregulation of hydrogen sulfide synthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"downregulation of hydrogen sulphide biosynthetic process","type":"exact"},{"name":"inhibition of hydrogen sulfide anabolism","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulfide biosynthetic process","type":"narrow"},{"name":"inhibition of hydrogen sulfide formation","type":"narrow"},{"name":"inhibition of hydrogen sulfide synthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthesis","type":"narrow"},{"name":"inhibition of hydrogen sulphide biosynthetic process","type":"narrow"},{"name":"negative regulation of hydrogen sulfide anabolism","type":"exact"},{"name":"negative regulation of hydrogen sulfide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulfide formation","type":"exact"},{"name":"negative regulation of hydrogen sulfide synthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthesis","type":"exact"},{"name":"negative regulation of hydrogen sulphide biosynthetic process","type":"exact"}],"termid":"GO:1904827"}


id: PBO:0081589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF516 antisense RNA 1","termid":"PBO:0081589"}


id: PBO:0054781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2194","termid":"PBO:0054781"}


id: PBO:0039643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1AR divergent transcript","termid":"PBO:0039643"}


id: PR:O14352
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.06","synonyms":[{"name":"Spom972h-lsm4","type":"exact"}],"termid":"PR:O14352"}


id: PBO:0067727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 25","termid":"PBO:0067727"}


id: PBO:0076552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 3","termid":"PBO:0076552"}


id: PBO:0067966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 268","termid":"PBO:0067966"}


id: PBO:0089124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd6","termid":"PBO:0089124"}


id: PBO:0004761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA decapping complex regulatory subunit Dcp1","termid":"PBO:0004761"}


id: PBO:0066320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring-box 1","termid":"PBO:0066320"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: GO:0140963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A chemical homeostatic process involved in the maintenance of a steady state level of auxin within extracellular body fluids, such as the xylem or phloem of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organismal-level auxin homeostasis (obsolete GO:0140963)","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"multicellular organismal auxin homeostasis","type":"exact"}],"termid":"GO:0140963"}


id: GO:0032394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an MHC class Ib protein complex and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib receptor activity","synonyms":[{"name":"T cell receptor activity","type":"related"},{"name":"alpha-beta T cell receptor activity","type":"related"},{"name":"gamma-delta T cell receptor activity","type":"related"}],"termid":"GO:0032394"}


id: FYECO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing ethanol as the carbon source, yeast extract and other components. The concentration of ethanol is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol YE","synonyms":[{"name":"ethanol rich medium","type":"broad"}],"termid":"FYECO:0000428"}


id: PBO:0081185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZHX1-C8orf76 readthrough","termid":"PBO:0081185"}


id: PBO:0071571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 37","termid":"PBO:0071571"}


id: PBO:0003526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2H2 type zinc finger protein, implicated in RNAi (predicted)","termid":"PBO:0003526"}


id: GO:0018923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["UM-BBD_pathwayID:lim"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"limonene metabolic process","synonyms":[{"name":"limonene metabolism","type":"exact"}],"termid":"GO:0018923"}


id: PBO:0055729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 3","termid":"PBO:0055729"}


id: PBO:0082088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP; which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; PRS4 has a paralog, PRS2, that arose from the whole genome duplication; a missense mutation in the conserved residue R196 of its human homolog PRPS1 is pathogenic","termid":"PBO:0082088"}


id: GO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM15 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM15 complex","type":"narrow"}],"termid":"GO:0071056"}


id: PBO:0076167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 3","termid":"PBO:0076167"}


id: PBO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone p-factor receptor","termid":"PBO:0002687"}


id: PBO:0077731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 18 pseudogene 3","termid":"PBO:0077731"}


id: GO:0042489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of odontogenesis","termid":"GO:0042483"},{"relation_name":"is_a","term_name":"regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042487"},{"relation_name":"negatively_regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"down regulation of odontogenesis","type":"broad"},{"name":"down-regulation of odontogenesis","type":"broad"},{"name":"downregulation of odontogenesis","type":"broad"},{"name":"inhibition of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"negative regulation of odontogenesis of dentine-containing tooth","type":"related"}],"termid":"GO:0042489"}


id: PBO:0066683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, LIM domain interacting pseudogene 1","termid":"PBO:0066683"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","RESID:AA0387","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein octanoylation","termid":"GO:0018190"},{"relation_name":"is_a","term_name":"peptidyl-threonine modification","termid":"GO:0018210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042158"],"is_obsolete":false,"name":"peptidyl-threonine octanoylation","secondary_identifiers":["RESID:AA0386"],"termid":"GO:0051368"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: PBO:0069015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 259, pseudogene","termid":"PBO:0069015"}


id: PBO:0089426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein, involved in splicing","termid":"PBO:0089426"}


id: GO:0007584
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036245"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"},{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nutrient","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nutritional response pathway","type":"narrow"},{"name":"response to nutrients","type":"exact"}],"termid":"GO:0007584","terms_by_termid":{"GO:0036245":null}}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: FYPO:0001617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular isoleucine level","synonyms":[{"name":"decreased cellular L-isoleucine level","type":"exact"},{"name":"decreased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"decreased level of isoleucine in cell","type":"exact"},{"name":"reduced cellular isoleucine level","type":"exact"},{"name":"reduced level of isoleucine in cell","type":"exact"}],"termid":"FYPO:0001617"}


id: GO:0036421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of cell outer membrane","termid":"GO:0031242"},{"relation_name":"is_a","term_name":"extrinsic component of mycolate outer membrane","termid":"GO:0036420"},{"relation_name":"part_of","term_name":"external side of mycolate outer membrane","termid":"GO:0098568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of mycolate outer membrane","synonyms":[{"name":"extrinsic to external side of MOM","type":"exact"},{"name":"extrinsic to external side of mycolate outer membrane","type":"narrow"},{"name":"extrinsic to external side of mycomembrane","type":"exact"}],"termid":"GO:0036421"}


id: PBO:0087014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleoprotein that contains two RNA recognition motifs (RRM); RNP1 has a paralog, SBP1, that arose from the whole genome duplication","termid":"PBO:0087014"}


id: GO:0019254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carnitine, where metabolism is linked to CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine metabolic process, CoA-linked","secondary_identifiers":["MetaCyc:CARNMET-PWY"],"synonyms":[{"name":"carnitine metabolism, CoA-linked","type":"exact"}],"termid":"GO:0019254"}


id: GO:0009997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"negative regulation of cardiac cell fate specification","termid":"GO:2000044"},{"relation_name":"negatively_regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast cell fate specification","secondary_identifiers":["GO:0042687"],"synonyms":[{"name":"down regulation of cardioblast cell fate specification","type":"exact"},{"name":"down-regulation of cardioblast cell fate specification","type":"exact"},{"name":"downregulation of cardioblast cell fate specification","type":"exact"},{"name":"inhibition of cardioblast cell fate specification","type":"narrow"},{"name":"suppression of cardioblast cell fate","type":"exact"}],"termid":"GO:0009997"}


id: GO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cadherin, a type I membrane protein involved in cell adhesion.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion molecule binding","termid":"GO:0050839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"cadherin binding","termid":"GO:0045296"}


id: PBO:0049028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 15","termid":"PBO:0049028"}


id: GO:0034980
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains CREB and FHL2, and is involved in transcriptional regulation.","definition_xrefs":["PMID:11046156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"FHL2-CREB complex","termid":"GO:0034980"}


id: PBO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk8 (predicted)","termid":"PBO:0000572"}


id: GO:1905605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["PMID:22524708","PMID:30280653","GOC:bc","GOC:als","GO_REF:0000058","GOC:aruk","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood-brain barrier permeability","synonyms":[{"name":"activation of maintenance of permeability of BBB","type":"narrow"},{"name":"activation of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"positive regulation of BBB permeability","type":"exact"},{"name":"positive regulation of blood/brain barrier permeability","type":"exact"},{"name":"up-regulation of BBB permeability","type":"exact"},{"name":"up-regulation of blood-brain barrier permeability","type":"exact"},{"name":"up-regulation of blood/brain barrier permeability","type":"exact"},{"name":"upregulation of BBB permeability","type":"exact"},{"name":"upregulation of blood-brain barrier permeability","type":"exact"},{"name":"upregulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905605"}


id: PBO:0090332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2","termid":"PBO:0090332"}


id: RO:0002551
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a segment or subdivision of an organism and the maximal subdivision of material entities that provides structural support for that segment or subdivision.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_skeleton","termid":"RO:0002551"}


id: PBO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm2 (predicted)","termid":"PBO:0001422"}


id: FYECO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3,4-dihydrocoumarin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,4-dihydrocoumarin","synonyms":[{"name":"3,4-dihydrocoumarin added","type":"exact"}],"termid":"FYECO:0000410"}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: GO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol biosynthetic process","termid":"GO:0045540"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol metabolic process","termid":"GO:0090205"},{"relation_name":"is_a","term_name":"positive regulation of sterol biosynthetic process","termid":"GO:0106120"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol biosynthetic process","synonyms":[{"name":"activation of cholesterol biosynthetic process","type":"narrow"},{"name":"positive regulation of cholesterol anabolism","type":"exact"},{"name":"positive regulation of cholesterol biosynthesis","type":"exact"},{"name":"positive regulation of cholesterol formation","type":"exact"},{"name":"positive regulation of cholesterol synthesis","type":"exact"},{"name":"stimulation of cholesterol biosynthetic process","type":"narrow"},{"name":"up regulation of cholesterol biosynthetic process","type":"exact"},{"name":"up-regulation of cholesterol biosynthetic process","type":"exact"},{"name":"upregulation of cholesterol biosynthetic process","type":"exact"}],"termid":"GO:0045542"}


id: GO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of membrane attack complex","synonyms":[{"name":"activation of activation of membrane attack complex","type":"narrow"},{"name":"positive regulation of MAC assembly","type":"exact"},{"name":"positive regulation of MAC formation","type":"exact"},{"name":"positive regulation of activation of MAC","type":"exact"},{"name":"positive regulation of activation of TCC","type":"narrow"},{"name":"positive regulation of activation of terminal complement complex","type":"narrow"},{"name":"positive regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"positive regulation of membrane attack complex assembly","type":"exact"},{"name":"positive regulation of membrane attack complex formation","type":"exact"},{"name":"stimulation of activation of membrane attack complex","type":"narrow"},{"name":"up regulation of activation of membrane attack complex","type":"exact"},{"name":"up-regulation of activation of membrane attack complex","type":"exact"},{"name":"upregulation of activation of membrane attack complex","type":"exact"}],"termid":"GO:0001970"}


id: GO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pseudotropine = H+ + NADPH + tropinone.","definition_xrefs":["EC:1.1.1.236","RHEA:24244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tropinone reductase activity","secondary_identifiers":["KEGG_REACTION:R06734","MetaCyc:TROPINONE-REDUCTASE-RXN"],"synonyms":[{"name":"pseudotropine forming tropinone reductase activity","type":"related"},{"name":"pseudotropine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"tropinone (psi-tropine-forming) reductase activity","type":"related"},{"name":"tropinone reductase II activity","type":"related"}],"termid":"GO:0050358"}


id: GO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system development","secondary_identifiers":["GO:0022621"],"synonyms":[{"name":"shoot development","type":"exact"}],"termid":"GO:0048367"}


id: PBO:0078149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 27","termid":"PBO:0078149"}


id: GO:1901187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ephrin receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"ephrin receptor signaling pathway","termid":"GO:0048013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ephrin receptor signaling pathway","synonyms":[{"name":"regulation of Eph receptor signaling pathway","type":"exact"},{"name":"regulation of Eph receptor signalling pathway","type":"exact"}],"termid":"GO:1901187"}


id: GO:0019448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process","synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448"}


id: PBO:0060204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 3","termid":"PBO:0060204"}


id: PBO:0038474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 12","termid":"PBO:0038474"}


id: PBO:0061049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 4","termid":"PBO:0061049"}


id: GO:0102885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-alpha-cuprenene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"alpha-cuprenene synthase activity","secondary_identifiers":["RHEA:32027","MetaCyc:RXN-8426"],"termid":"GO:0102885"}


id: PATO:0000255
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000255 taste_acuity (obsolete PATO:0000255)","termid":"PATO:0000255"}


id: PR:O13868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.02c gene.","definition_xrefs":["UniProtKB:O13868","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.02c","synonyms":[{"name":"Spom972h-SPAC1B3.02c","type":"exact"}],"termid":"PR:O13868"}


id: GO:0010822
data:
  {"annotated_genes":["SJAG_01212","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[104208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"positively_regulates","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007005"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrion organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010822","terms_by_termid":{"GO:0090141":null,"GO:1903599":null}}


id: FYPO:0000939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to spindle pole body","termid":"FYPO:0002769"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to mitotic spindle pole body","synonyms":[{"name":"abnormal protein localisation to mitotic spindle pole body","type":"exact"},{"name":"abnormal protein localization to mitotic SPB","type":"exact"},{"name":"abnormal protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0000939"}


id: GO:0141069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of the ligand of a signaling receptor.","definition_xrefs":["PMID:1721860","PMID:12478285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"receptor ligand inhibitor activity","synonyms":[{"name":"signaling receptor ligand inhibitor activity","type":"exact"}],"termid":"GO:0141069"}


id: PBO:0046247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 3","termid":"PBO:0046247"}


id: PBO:0067810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 112","termid":"PBO:0067810"}


id: PBO:0030061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_spindle_pole_body","termid":"PBO:0030061"}


id: PR:O42653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC10F6.14c gene.","definition_xrefs":["UniProtKB:O42653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 family protein C10F6.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.14c","synonyms":[{"name":"Spom972h-SPAC10F6.14c","type":"exact"}],"termid":"PR:O42653"}


id: PBO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin theta 1, pseudogene","termid":"PBO:0044856"}


id: FYPO:0004591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0002399","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"monopolar mitotic spindle following normal mitosis","synonyms":[{"name":"monopolar mitotic spindle following normal mitosis and interphase","type":"exact"},{"name":"monopolar mitotic spindle following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"monopolar mitotic spindle following normal mitosis during vegetative growth","type":"exact"},{"name":"monopolar mitotic spindle following normal mitotic nuclear division","type":"exact"},{"name":"monopolar mitotic spindle following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004591"}


id: GO:0140933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5'-end (N7-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + H2O = a 5'-end phospho-ribonucleoside in mRNA + N7-methyl-GDP + H+.","definition_xrefs":["PMID:18820299","PMID:29483298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 5'-phosphatase activity","termid":"GO:0140818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity","secondary_identifiers":["RHEA:67484","EC:3.6.1.62"],"synonyms":[{"name":"m(7)GpppN-mRNA hydrolase activity","type":"exact"}],"termid":"GO:0140933"}


id: PBO:0046778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosin like glycosyltransferase 3","termid":"PBO:0046778"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["Unimod:122#N-term","PubMed:12051774","PubMed:5464655","RESID:AA0384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


id: GO:1902434
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95836],"is_not":false,"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"},{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sulfate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfate import into cell","type":"exact"},{"name":"sulphate import into cell","type":"exact"}],"termid":"GO:1902434","terms_by_termid":{"GO:1902434":null}}


id: SO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is di-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_dimethylation_site","synonyms":[{"name":"H3K79 di-methylation site","type":"exact"},{"name":"H3K79Me2","type":"related"}],"termid":"SO:0001711"}


id: PBO:0085748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; implicated in activation of the plasma membrane H(+)-ATPase Pma1p in response to glucose metabolism; plays a role in ion homeostasis; protein abundance increases in response to DNA replication stress","termid":"PBO:0085748"}


id: GO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic large ribosomal subunit (obsolete GO:0000180)","synonyms":[{"name":"cytosolic large ribosomal subunit","type":"exact"}],"termid":"GO:0000180"}


id: FYPO:0005466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the non-growing cell tip is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cell tip","termid":"FYPO:0003527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to non-growing cell tip","synonyms":[{"name":"ectopic protein localization to non-growing cell tip","type":"exact"},{"name":"protein mislocalised to non-growing cell tip","type":"exact"},{"name":"protein mislocalised to non-growing cell tip during vegetative growth","type":"exact"},{"name":"protein mislocalized to non-growing cell end","type":"exact"},{"name":"protein mislocalized to non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to non-growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005466"}


id: GO:0033114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by a cyanelle thylakoid membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"cyanelle thylakoid","termid":"GO:0009843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle thylakoid lumen","termid":"GO:0033114"}


id: GO:0021880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:cls","PMID:16226447","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete Notch signaling pathway involved in forebrain neuron fate commitment (obsolete GO:0021880)","synonyms":[{"name":"Notch signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0021880"}


id: PBO:0035984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction_during_cellular_response_to_hydroxyurea","termid":"PBO:0035984"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["GO_REF:0000059","PMID:26503245","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA binding","termid":"GO:1905493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of G-quadruplex DNA binding","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: PBO:0078859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 7","termid":"PBO:0078859"}


id: FYPO:0004914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit differs from normal.","definition_xrefs":["PomBase:mah","PMID:18157152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomeric repeat sequence","termid":"FYPO:0004914"}


id: PBO:0077347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87B","termid":"PBO:0077347"}


id: PBO:0059499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 2","termid":"PBO:0059499"}


id: PBO:0047987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member D, pseudogene","termid":"PBO:0047987"}


id: GO:0047972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-guanidinopropanoate + H2O = beta-alanine + urea.","definition_xrefs":["EC:3.5.3.17","RHEA:16029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"guanidinopropionase activity","secondary_identifiers":["KEGG_REACTION:R00913","MetaCyc:GUANIDINOPROPIONASE-RXN"],"synonyms":[{"name":"3-guanidinopropanoate amidinopropionase activity","type":"related"},{"name":"GPH","type":"related"},{"name":"GPase activity","type":"related"}],"termid":"GO:0047972"}


id: PBO:0069347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 607, pseudogene","termid":"PBO:0069347"}


id: PBO:0074134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 2","termid":"PBO:0074134"}


id: GO:0061425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of an ethanol catabolic process.","definition_xrefs":["GOC:dph","PMID:10608811","PMID:7760841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"positive regulation of ethanol catabolic process","termid":"GO:1900066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0044281","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of ethanol catabolic process by positive regulation of transcription from RNA polymerase II promoter","termid":"GO:0061425"}


id: GO:0050320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate = (2R,3S)-tartrate.","definition_xrefs":["EC:5.1.2.5","RHEA:22212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tartrate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02546","MetaCyc:TARTRATE-EPIMERASE-RXN"],"synonyms":[{"name":"tartaric racemase activity","type":"related"}],"termid":"GO:0050320"}


id: GO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Xaa, Lys-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trypsin activity (obsolete GO:0004295)","synonyms":[{"name":"alpha-trypsin activity","type":"narrow"},{"name":"beta-trypsin activity","type":"narrow"},{"name":"cocoonase activity","type":"related"},{"name":"parenzyme","type":"related"},{"name":"parenzymol","type":"related"},{"name":"pseudotrypsin","type":"related"},{"name":"sperm receptor hydrolase activity","type":"related"},{"name":"tripcellim","type":"related"},{"name":"trypsin activity","type":"exact"},{"name":"tryptar","type":"related"},{"name":"trypure","type":"related"}],"termid":"GO:0004295"}


id: PBO:0049716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 2","termid":"PBO:0049716"}


id: PBO:0059865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 2","termid":"PBO:0059865"}


id: GO:0019620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid) that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate metabolic process","termid":"GO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aerobic benzoate metabolic process","synonyms":[{"name":"aerobic benzoate metabolism","type":"exact"}],"termid":"GO:0019620"}


id: PBO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght6","termid":"PBO:0005048"}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: GO:0031131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one cell or group of cells receives, transduces, and responds to a signal generated by another cell or group of cells of different ancestry and developmental potential, such that the recipient cell(s) undergo a developmental change.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to extracellular stimulus","termid":"GO:0031668"},{"relation_name":"part_of","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reception of an inductive signal","termid":"GO:0031131"}


id: PBO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VI (predicted)","termid":"PBO:0001744"}


id: GO:0007611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition and processing of information and/or the storage and retrieval of this information over time.","definition_xrefs":["GOC:jid","PMID:8938125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"cognition","termid":"GO:0050890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learning or memory","termid":"GO:0007611"}


id: GO:0062234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of platelet activating factor, 2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine.","definition_xrefs":["PMID:16371369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether catabolic process","termid":"GO:0044269"},{"relation_name":"is_a","term_name":"platelet activating factor metabolic process","termid":"GO:0046469"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"platelet activating factor catabolic process","synonyms":[{"name":"2-O-acetyl-1-O-octadecyl-sn-glycero-3-phosphocholine catabolic process","type":"exact"},{"name":"PAF catabolic process","type":"related"}],"termid":"GO:0062234"}


id: GO:0033584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyrosine from other compounds, including chorismate, via the intermediate L-arogenate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"tyrosine biosynthetic process from chorismate via L-arogenate","secondary_identifiers":["MetaCyc:PWY-3461"],"synonyms":[{"name":"tyrosine anabolism from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine formation from chorismate via L-arogenate","type":"exact"},{"name":"tyrosine synthesis from chorismate via L-arogenate","type":"exact"}],"termid":"GO:0033584"}


id: PBO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-60","termid":"PBO:0051448"}


id: PBO:0087449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Aim21p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; TcTex1-type dynein light chain family member; null mutant is sensitive to expression of the top1-T722A allele","termid":"PBO:0087449"}


id: PBO:0078234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 16","termid":"PBO:0078234"}


id: PBO:0062326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 64 pseudogene","termid":"PBO:0062326"}


id: GO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete effector caspase activity (obsolete GO:0004207)","synonyms":[{"name":"effector caspase activity","type":"exact"}],"termid":"GO:0004207"}


id: PATO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an organism or a population with both male and female sexual organs in one individual.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hermaphrodite","synonyms":[{"name":"intersex","type":"exact"}],"termid":"PATO:0001340"}


id: GO:1903076
data:
  {"annotated_genes":["SJAG_00030","SJAG_03970","SJAG_02392","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[90019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[91435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[100068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:11602640","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to plasma membrane","termid":"GO:0072659"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1905963","GO:0090003"],"synonyms":[{"name":"regulation of establishment of protein localisation in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization in plasma membrane","type":"related"},{"name":"regulation of establishment of protein localization to plasma membrane","type":"related"},{"name":"regulation of protein localisation in plasma membrane","type":"related"},{"name":"regulation of protein localization in plasma membrane","type":"exact"},{"name":"regulation of protein targeting to plasma membrane","type":"related"},{"name":"regulation of protein-plasma membrane targeting","type":"related"}],"termid":"GO:1903076","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: PATO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000116 relative temperature sensitivity (obsolete PATO:0000116)","termid":"PATO:0000116"}


id: PBO:0063532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 1 pseudogene 1","termid":"PBO:0063532"}


id: PBO:0017984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex subunit Tom5 (predicted)","termid":"PBO:0017984"}


id: PBO:0080202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial zinc finger 1","termid":"PBO:0080202"}


id: PBO:0053044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 4","termid":"PBO:0053044"}


id: FYPO:0002504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein palmitoylation","synonyms":[{"name":"protein palmitoylation abolished","type":"exact"},{"name":"protein palmitoylation absent","type":"exact"}],"termid":"FYPO:0002504"}


id: PBO:0008071
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KEX2","termid":"PBO:0008071"}


id: PBO:0073237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 1","termid":"PBO:0073237"}


id: PBO:0027606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027606"}


id: GO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of epinephrine secretion","synonyms":[{"name":"regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0014060"}


id: PBO:0073297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 19","termid":"PBO:0073297"}


id: PBO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 1","termid":"PBO:0042464"}


id: GO:0042543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via peptidyl-arginine, omega-N-glycosyl-L-arginine.","definition_xrefs":["RESID:AA0327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation","termid":"GO:0006487"},{"relation_name":"is_a","term_name":"peptidyl-arginine modification","termid":"GO:0018195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein N-linked glycosylation via arginine","synonyms":[{"name":"protein amino acid N-linked glycosylation via arginine","type":"exact"}],"termid":"GO:0042543"}


id: PR:O74837
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp31 gene.","definition_xrefs":["UniProtKB:O74837","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.09c","synonyms":[{"name":"Spom972h-pmp31","type":"exact"},{"name":"meiotically up-regulated gene 75 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74837"}


id: GO:0034811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-9,10-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"benzo(a)pyrene 9,10-dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034811"}


id: GO:0032646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hepatocyte growth factor production.","definition_xrefs":["GOC:mah","PMID:1838014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hepatocyte growth factor production","termid":"GO:0032605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor production","secondary_identifiers":["GO:0048176"],"synonyms":[{"name":"regulation of HGF production","type":"exact"},{"name":"regulation of hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"regulation of scatter factor production","type":"exact"}],"termid":"GO:0032646"}


id: PBO:0086201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; likely functions in cristae junction formation; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086201"}


id: PR:O94306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpp21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.19","synonyms":[{"name":"Spom972h-rpp21","type":"exact"}],"termid":"PR:O94306"}


id: PR:Q92398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmk1 gene.","definition_xrefs":["UniProtKB:Q92398","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase spm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.08","synonyms":[{"name":"MAP kinase pmk1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAP kinase spm1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmk1","type":"exact"}],"termid":"PR:Q92398"}


id: GO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ankyrin repeat of a protein. Ankyrin repeats are tandemly repeated modules of about 33 amino acids; each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90-degree angle, and repeats stack to form an L-shaped structure.","definition_xrefs":["GOC:mah","InterPro:IPR002110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ankyrin repeat binding","synonyms":[{"name":"ANK repeat binding","type":"exact"}],"termid":"GO:0071532"}


id: PBO:0078991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-1","termid":"PBO:0078991"}


id: PBO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe Repressor of Activation","termid":"PBO:0013014"}


id: PBO:0028700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_catabolic_process","termid":"PBO:0028700"}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic metabolic process","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: GO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.","definition_xrefs":["PMID:17567809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link","termid":"GO:0002141"}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of osmosensory signaling pathway","termid":"GO:0120027"}


id: GO:0045737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CDK activity.","definition_xrefs":["GOC:go_curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyclin-dependent protein serine/threonine kinase activity","termid":"GO:0000079"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle","termid":"GO:0045787"},{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"positive regulation of cyclin-dependent protein kinase activity","termid":"GO:1904031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclin-dependent protein serine/threonine kinase activity","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"positive regulation of CDK activity","type":"broad"},{"name":"positive regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"up-regulation of cyclin-dependent protein kinase activity","type":"broad"},{"name":"upregulation of cyclin-dependent protein kinase activity","type":"broad"}],"termid":"GO:0045737"}


id: FYPO:0007552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein ubiquitination during vegetative growth","termid":"FYPO:0002635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein ubiquitination during cellular response to hydroxyurea","synonyms":[{"name":"normal protein ubiquitination during cellular response to HU","type":"exact"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitination during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein ubiquitinylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein ubiquitylation during cellular response to hydroxyurea","type":"exact"},{"name":"normal protein/peptide ubiquitination during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007552"}


id: GO:1902006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23415322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proline biosynthetic process","termid":"GO:1902005"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"negatively_regulates","term_name":"proline biosynthetic process","termid":"GO:0006561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of proline biosynthetic process","synonyms":[{"name":"down regulation of proline anabolism","type":"exact"},{"name":"down regulation of proline biosynthesis","type":"exact"},{"name":"down regulation of proline biosynthetic process","type":"exact"},{"name":"down regulation of proline formation","type":"exact"},{"name":"down regulation of proline synthesis","type":"exact"},{"name":"down-regulation of proline anabolism","type":"exact"},{"name":"down-regulation of proline biosynthesis","type":"exact"},{"name":"down-regulation of proline biosynthetic process","type":"exact"},{"name":"down-regulation of proline formation","type":"exact"},{"name":"down-regulation of proline synthesis","type":"exact"},{"name":"downregulation of proline anabolism","type":"exact"},{"name":"downregulation of proline biosynthesis","type":"exact"},{"name":"downregulation of proline biosynthetic process","type":"exact"},{"name":"downregulation of proline formation","type":"exact"},{"name":"downregulation of proline synthesis","type":"exact"},{"name":"inhibition of proline anabolism","type":"exact"},{"name":"inhibition of proline biosynthesis","type":"exact"},{"name":"inhibition of proline biosynthetic process","type":"narrow"},{"name":"inhibition of proline formation","type":"exact"},{"name":"inhibition of proline synthesis","type":"exact"},{"name":"negative regulation of proline anabolism","type":"exact"},{"name":"negative regulation of proline biosynthesis","type":"exact"},{"name":"negative regulation of proline formation","type":"exact"},{"name":"negative regulation of proline synthesis","type":"exact"}],"termid":"GO:1902006"}


id: PBO:0068893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 135, pseudogene","termid":"PBO:0068893"}


id: GO:1902948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tau-protein kinase activity.","definition_xrefs":["PMID:22986780","GOC:TermGenie","PMID:15897157","GO_REF:0000059","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of tau-protein kinase activity","termid":"GO:1902947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tau-protein kinase activity","synonyms":[{"name":"inhibition of cdk5/p20","type":"related"},{"name":"down regulation of CDK5/p23","type":"related"},{"name":"down regulation of GSK","type":"related"},{"name":"down regulation of STK31","type":"related"},{"name":"down regulation of TPK","type":"related"},{"name":"down regulation of TPK I","type":"related"},{"name":"down regulation of TPK II","type":"related"},{"name":"down regulation of TTK","type":"related"},{"name":"down regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down regulation of cdk5/p20","type":"related"},{"name":"down regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down regulation of protein tau kinase activity","type":"exact"},{"name":"down regulation of tau kinase activity","type":"exact"},{"name":"down regulation of tau protein kinase activity","type":"exact"},{"name":"down regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down regulation of tau-protein kinase activity","type":"exact"},{"name":"down regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"down-regulation of CDK5/p23","type":"related"},{"name":"down-regulation of GSK","type":"related"},{"name":"down-regulation of STK31","type":"related"},{"name":"down-regulation of TPK","type":"related"},{"name":"down-regulation of TPK I","type":"related"},{"name":"down-regulation of TPK II","type":"related"},{"name":"down-regulation of TTK","type":"related"},{"name":"down-regulation of [Tau protein] kinase activity","type":"exact"},{"name":"down-regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"down-regulation of cdk5/p20","type":"related"},{"name":"down-regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"down-regulation of protein tau kinase activity","type":"exact"},{"name":"down-regulation of tau kinase activity","type":"exact"},{"name":"down-regulation of tau protein kinase activity","type":"exact"},{"name":"down-regulation of tau-protein kinase I activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase II activity","type":"narrow"},{"name":"down-regulation of tau-protein kinase activity","type":"exact"},{"name":"down-regulation of tau-tubulin kinase activity","type":"narrow"},{"name":"downregulation of CDK5/p23","type":"related"},{"name":"downregulation of GSK","type":"related"},{"name":"downregulation of STK31","type":"related"},{"name":"downregulation of TPK","type":"related"},{"name":"downregulation of TPK I","type":"related"},{"name":"downregulation of TPK II","type":"related"},{"name":"downregulation of TTK","type":"related"},{"name":"downregulation of [Tau protein] kinase activity","type":"exact"},{"name":"downregulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"downregulation of cdk5/p20","type":"related"},{"name":"downregulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"downregulation of protein tau kinase activity","type":"exact"},{"name":"downregulation of tau kinase activity","type":"exact"},{"name":"downregulation of tau protein kinase activity","type":"exact"},{"name":"downregulation of tau-protein kinase I activity","type":"narrow"},{"name":"downregulation of tau-protein kinase II activity","type":"narrow"},{"name":"downregulation of tau-protein kinase activity","type":"exact"},{"name":"downregulation of tau-tubulin kinase activity","type":"narrow"},{"name":"inhibition of CDK5/p23","type":"related"},{"name":"inhibition of GSK","type":"related"},{"name":"inhibition of STK31","type":"related"},{"name":"inhibition of TPK","type":"related"},{"name":"inhibition of TPK I","type":"related"},{"name":"inhibition of TPK II","type":"related"},{"name":"inhibition of TTK","type":"related"},{"name":"inhibition of [Tau protein] kinase activity","type":"narrow"},{"name":"inhibition of brain protein kinase PK40erk activity","type":"narrow"},{"name":"inhibition of glycogen synthase kinase-3beta activity","type":"narrow"},{"name":"inhibition of protein tau kinase activity","type":"narrow"},{"name":"inhibition of tau kinase activity","type":"narrow"},{"name":"inhibition of tau protein kinase activity","type":"narrow"},{"name":"inhibition of tau-protein kinase I activity","type":"narrow"},{"name":"inhibition of tau-protein kinase II activity","type":"narrow"},{"name":"inhibition of tau-protein kinase activity","type":"narrow"},{"name":"inhibition of tau-tubulin kinase activity","type":"narrow"},{"name":"negative regulation of CDK5/p23","type":"related"},{"name":"negative regulation of GSK","type":"related"},{"name":"negative regulation of STK31","type":"related"},{"name":"negative regulation of TPK","type":"related"},{"name":"negative regulation of TPK I","type":"related"},{"name":"negative regulation of TPK II","type":"related"},{"name":"negative regulation of TTK","type":"related"},{"name":"negative regulation of [Tau protein] kinase activity","type":"exact"},{"name":"negative regulation of brain protein kinase PK40erk activity","type":"narrow"},{"name":"negative regulation of cdk5/p20","type":"related"},{"name":"negative regulation of glycogen synthase kinase-3beta activity","type":"exact"},{"name":"negative regulation of protein tau kinase activity","type":"exact"},{"name":"negative regulation of tau kinase activity","type":"exact"},{"name":"negative regulation of tau protein kinase activity","type":"exact"},{"name":"negative regulation of tau-protein kinase I activity","type":"narrow"},{"name":"negative regulation of tau-protein kinase II activity","type":"narrow"},{"name":"negative regulation of tau-tubulin kinase activity","type":"narrow"}],"termid":"GO:1902948"}


id: PBO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_beta-glucan_level","termid":"PBO:0030613"}


id: GO:0043721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybutanoyl-CoA = vinylacetyl-CoA + H2O.","definition_xrefs":["EC:4.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybutanoyl-CoA dehydratase activity","secondary_identifiers":["KEGG_REACTION:R05337","RHEA:26530","MetaCyc:RXN-8890"],"synonyms":[{"name":"4-hydroxybutanoyl-CoA hydro-lyase","type":"exact"},{"name":"4-hydroxybutyryl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutanoyl-CoA dehydratase activity","type":"exact"},{"name":"gamma-hydroxybutyryl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0043721"}


id: PBO:0085392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane Mg(2+) transporter; expression and turnover are regulated by Mg(2+) concentration; overexpression confers increased tolerance to Al(3+) and Ga(3+) ions; magnesium transport defect of the null mutant is functionally complemented by either of the human genes MAGT1 and TUSC3 that are not orthologous to ALR1","termid":"PBO:0085392"}


id: GO:1902998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15897157","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"positively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurofibrillary tangle assembly","synonyms":[{"name":"activation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"activation of neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of neurofibrillary tangle formation","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"activation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"positive regulation of neurofibrillary tangle formation","type":"exact"},{"name":"positive regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"positive regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"up-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"up-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"up-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"up-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"upregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"upregulation of neurofibrillary tangle formation","type":"exact"},{"name":"upregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"upregulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902998"}


id: GO:0042812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"},{"relation_name":"is_a","term_name":"pheromone metabolic process","termid":"GO:0042810"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044248"],"is_obsolete":false,"name":"pheromone catabolic process","secondary_identifiers":["GO:0007327","GO:0046614"],"synonyms":[{"name":"pheromone breakdown","type":"exact"},{"name":"pheromone catabolism","type":"exact"},{"name":"pheromone degradation","type":"exact"}],"termid":"GO:0042812"}


id: GO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in cardiac neural crest cell differentiation.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac neural crest cell differentiation involved in heart development (obsolete GO:0061310)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac neural crest cell differentiation involved in heart development","type":"exact"}],"termid":"GO:0061310"}


id: PBO:0069708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 988, pseudogene","termid":"PBO:0069708"}


id: PATO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000536 water sensitivity value (obsolete PATO:0000536)","termid":"PATO:0000536"}


id: SO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a cyanelle, a photosynthetic plastid found in algae.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_sequence","synonyms":[{"name":"cyanelle sequence","type":"exact"}],"termid":"SO:0000746"}


id: MOD:01730
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-127 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01730"}


id: PBO:0065790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain and coiled-coil containing 1","termid":"PBO:0065790"}


id: GO:0098788
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal swelling of an apical dendrite of a ciliated olfactory receptor neuron. Each knob gives rise to 5 to 20 long delicate nonmotile cilia, which extend into the mucus covering the sensory epithelium.","definition_xrefs":["PMID:20801626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite terminus","termid":"GO:0044292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic knob","synonyms":[{"name":"apical dendritic knob","type":"exact"}],"termid":"GO:0098788"}


id: GO:0070287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ferritin, and delivering ferritin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:17459943","PMID:19154717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0003674","GO:0038024"],"is_obsolete":false,"name":"ferritin receptor activity","synonyms":[{"name":"ferritin complex receptor activity","type":"exact"}],"termid":"GO:0070287"}


id: GO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul2 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15688063","PMID:15571813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul2-RING ubiquitin ligase complex","synonyms":[{"name":"CBC complex","type":"broad"},{"name":"CDL2 complex","type":"exact"},{"name":"CRL2 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"ECS complex","type":"broad"},{"name":"SCF2 complex","type":"related"},{"name":"VBC complex","type":"narrow"},{"name":"cullin-RING ligase 2","type":"exact"}],"termid":"GO:0031462"}


id: PBO:0030820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sodium_export","termid":"PBO:0030820"}


id: GO:0102167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acetyl-alpha-D-glucosaminyl-L-serine-[glycoprotein] = N-acetyl-alpha-D-glucosaminide + a [protein]-L-serine.","definition_xrefs":["EC:3.2.1.169","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine O-N-acetyl-alpha-D-glucosaminase activity","secondary_identifiers":["MetaCyc:RXN-11892","RHEA:48876"],"termid":"GO:0102167"}


id: SO:0001673
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 12-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_12_signal","synonyms":[{"name":"minus 12 signal","type":"exact"}],"termid":"SO:0001673"}


id: GO:1900590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of violaceol I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"violaceol I metabolic process","termid":"GO:1900588"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"violaceol I biosynthetic process","synonyms":[{"name":"violaceol I anabolism","type":"exact"},{"name":"violaceol I biosynthesis","type":"exact"},{"name":"violaceol I formation","type":"exact"},{"name":"violaceol I synthesis","type":"exact"}],"termid":"GO:1900590"}


id: FYPO:0002997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of DNA replication during the mitotic cell cycle is normal (i.e. indistinguishable from wild type) during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of DNA replication","termid":"FYPO:0002995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal negative regulation of DNA replication during cellular response to MMS","type":"exact"},{"name":"normal negative regulation of DNA replication during cellular response to methyl methanesulphonate","type":"exact"},{"name":"normal negative regulation of nuclear cell cycle DNA replication during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002997"}


id: GO:0097603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens in response to a temperature stimulus (e.g. exposure to a temperature range different than the optimal temperature for that organism).","definition_xrefs":["GOC:ha","GOC:pr","PMID:23027824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"temperature-gated ion channel activity","synonyms":[{"name":"heat-activated ion channel activity","type":"narrow"},{"name":"temperature gated ion channel activity","type":"exact"},{"name":"temperature-activated ion channel activity","type":"exact"},{"name":"temperature-dependent ion channel activity","type":"exact"}],"termid":"GO:0097603"}


id: PBO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BeLT","termid":"PBO:0003845"}


id: PATO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000533 osmotic response sensitivity (obsolete PATO:0000533)","termid":"PATO:0000533"}


id: GO:0120259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains the 7SK snRNA. The 7SK snRNP plays a central role in RNA polymerase II elongation control by regulating the availability of active P-TEFb.","definition_xrefs":["PMID:28431135","PMID:18249148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nuclear ribonucleoprotein complex","termid":"GO:0030532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"7SK snRNP","synonyms":[{"name":"snRNP 7SK","type":"exact"}],"termid":"GO:0120259"}


id: GO:0141075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20624917","PMID:27437422","PMID:29924996","PMID:31413201","PMID:22919663"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression of host JAK-STAT cascade (obsolete GO:0141075)","synonyms":[{"name":"disruption of host JAK-STAT cascade","type":"exact"},{"name":"down-regulation of host JAK-STAT cascade","type":"exact"},{"name":"downregulation of host JAK-STAT cascade","type":"exact"},{"name":"inhibition of host JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of host JAK-STAT cascade","type":"exact"},{"name":"suppression of host JAK-STAT cascade","type":"exact"},{"name":"symbiont-mediated suppression of host JAK-STAT cascade","type":"related"}],"termid":"GO:0141075"}


id: FYPO:0005575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires magnesium ions in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for magnesium","synonyms":[{"name":"growth auxotrophic for magnesium during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for magnesium during vegetative growth","type":"exact"},{"name":"growth auxotrophic for magnesium ion","type":"exact"},{"name":"magnesium auxotrophy","type":"exact"}],"termid":"FYPO:0005575"}


id: PBO:0082283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP4A phosphorylase; bifunctional diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase and ADP sulfurylase involved in catabolism of bis(5'-nucleosidyl) tetraphosphates; catalyzes phosphorolysis of dinucleoside oligophosphates, cleaving substrates' alpha/beta-anhydride bond and introducing Pi into the beta-position of the corresponding NDP formed; protein abundance increases under DNA replication stress; APA1 has a paralog, APA2, that arose from the whole genome duplication","termid":"PBO:0082283"}


id: PBO:0040465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A5 antisense RNA 1","termid":"PBO:0040465"}


id: PBO:0068371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 157","termid":"PBO:0068371"}


id: GO:0014738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hyperplasia","termid":"GO:0014738"}


id: PBO:0058979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular LMNA interacting protein","termid":"PBO:0058979"}


id: PBO:0087765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0087765"}


id: FYPO:0005460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at promoters that contain MCB sites is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin at promoter","termid":"FYPO:0006349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at MCB promoters","synonyms":[{"name":"abolished protein localisation to chromatin at MCB promoters during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at MCB promoters during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at MCB target genes","type":"related"},{"name":"abolished protein localization to chromatin at MCB-containing promoters","type":"exact"},{"name":"protein localization to chromatin at MCB promoters during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005460"}


id: PBO:0051799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 1","termid":"PBO:0051799"}


id: SO:0001078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of peptide with secondary structure has hydrogen bonding along the peptide chain that causes a defined conformation of the chain.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_secondary_structure","secondary_identifiers":["http://en.wikipedia.org/wiki/Secondary_structure","BS:00003"],"synonyms":[{"name":"2nary structure","type":"related"},{"name":"polypeptide secondary structure","type":"exact"},{"name":"secondary structure","type":"related"},{"name":"secondary structure region","type":"related"},{"name":"secondary_structure","type":"related"}],"termid":"SO:0001078"}


id: GO:2000851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of corticosteroid hormone secretion","termid":"GO:2000848"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid secretion","termid":"GO:2000849"},{"relation_name":"positively_regulates","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"}


id: GO:0160006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process mediated by the Fc receptor for the purpose of delivery of antigen-bound immunoglobulin to an intracellular compartment where the antigen can be processed and loaded onto MHC molecules. This process selectively targets antigens for presentation by MHC class II or cross-presentation by MHC class I.","definition_xrefs":["PMID:28389502","PMID:9143687","PMID:9463401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"},{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"Fc receptor-mediated immune complex endocytosis","synonyms":[{"name":"Fc receptor-mediated immune complex internalization","type":"related"},{"name":"Ig-complexed antigen endocytosis via Fc receptor","type":"exact"},{"name":"antigen-antibody immune complex uptake via Fc receptor","type":"exact"}],"termid":"GO:0160006"}


id: internal:name
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name","termid":"internal:name"}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["RHEA:43532","GOC:jh2","PMID:24401123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: GO:0045289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the generalized reaction: luciferin + O2 = oxidized luciferin + CO2 + light. There may be additional substrates and reactants involved in the reaction. The reaction results in light emission as luciferin returns to the ground state after enzymatic oxidation.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"luciferin monooxygenase activity","synonyms":[{"name":"luciferase activity","type":"exact"},{"name":"luciferase monooxygenase activity","type":"related"}],"termid":"GO:0045289"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: PBO:0074611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 15","termid":"PBO:0074611"}


id: GO:0061808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of genetic recombination at the centromere.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at centromere","termid":"GO:0061806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombination at centromere","synonyms":[{"name":"negative regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061808"}


id: PBO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2","termid":"PBO:0042946"}


id: PATO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000007 relative activity (obsolete PATO:0000007)","termid":"PATO:0000007"}


id: PBO:0054188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1563","termid":"PBO:0054188"}


id: PR:Q10241
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mismatch-binding protein cmb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.11c","synonyms":[{"name":"Spom972h-cmb1","type":"exact"}],"termid":"PR:Q10241"}


id: PBO:0058947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mix paired-like homeobox","termid":"PBO:0058947"}


id: SO:0001973
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 3 modification where the modification is the acetylation of the residue.","definition_xrefs":["SO:ke","EBI:nj","ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_3_acetylation_site","synonyms":[{"name":"H3ac","type":"exact"},{"name":"histone 3 acetylation site","type":"exact"}],"termid":"SO:0001973"}


id: GO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in males of species in which the male is the heterogametic sex; generally, the sex chromosome that pairs with the X chromosome in the heterogametic sex. The Y chromosome is absent from the cells of females and present in one copy in the somatic cells of males.","definition_xrefs":["PMID:20622855","Wikipedia:XY_sex-determination_system","GOC:mr","ISBN:0582227089","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Y chromosome","secondary_identifiers":["Wikipedia:Y_chromosome"],"termid":"GO:0000806"}


id: PBO:0074491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 2","termid":"PBO:0074491"}


id: PBO:0043018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHL1 antisense RNA 2","termid":"PBO:0043018"}


id: PBO:0064934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPT2-EGFL8 readthrough (NMD candidate)","termid":"PBO:0064934"}


id: GO:0046985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of hemoglobin biosynthetic process","termid":"GO:0046984"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"hemoglobin biosynthetic process","termid":"GO:0042541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemoglobin biosynthetic process","synonyms":[{"name":"activation of hemoglobin biosynthetic process","type":"narrow"},{"name":"positive regulation of haemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of haemoglobin biosynthetic process","type":"exact"},{"name":"positive regulation of hemoglobin anabolism","type":"exact"},{"name":"positive regulation of hemoglobin biosynthesis","type":"exact"},{"name":"positive regulation of hemoglobin formation","type":"exact"},{"name":"positive regulation of hemoglobin synthesis","type":"exact"},{"name":"stimulation of hemoglobin biosynthetic process","type":"narrow"},{"name":"up regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"up-regulation of hemoglobin biosynthetic process","type":"exact"},{"name":"upregulation of hemoglobin biosynthetic process","type":"exact"}],"termid":"GO:0046985"}


id: PBO:0063662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGAM family member 5, mitochondrial serine/threonine protein phosphatase","termid":"PBO:0063662"}


id: GO:0097293
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"XMP metabolic process","termid":"GO:0097292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"XMP biosynthetic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"XMP anabolism","type":"exact"},{"name":"XMP biosynthesis","type":"exact"},{"name":"XMP formation","type":"exact"},{"name":"XMP synthesis","type":"exact"}],"termid":"GO:0097293","terms_by_termid":{"GO:0032265":null}}


id: PBO:0027689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_curved,_elongated_cell","termid":"PBO:0027689"}


id: _global:molecularly_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"An interaction relationship in which the two partners are molecular entities that directly physically interact with each other for example via a stable binding interaction or a brief interaction during which one modifies the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"_global:interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecularly_interacts_with","secondary_identifiers":["RO:0002436"],"termid":"_global:molecularly_interacts_with"}


id: PBO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 28","termid":"PBO:0072097"}


id: PBO:0054053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1395","termid":"PBO:0054053"}


id: PBO:0063262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 8","termid":"PBO:0063262"}


id: GO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"intracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005217"}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"N-benzoyl-L-glutamate synthetase activity","secondary_identifiers":["MetaCyc:RXN-10886"],"termid":"GO:0102087"}


id: GO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lipopolysaccharide + UDP-N-acetylmannosaminouronate = N-acetyl-beta-D-mannosaminouronosyl-1,4-lipopolysaccharide + UDP.","definition_xrefs":["RHEA:28366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide N-acetylmannosaminouronosyltransferase activity","secondary_identifiers":["EC:2.4.1.180","MetaCyc:UDPMANACATRANS-RXN"],"synonyms":[{"name":"LPS N-acetylmannosaminouronosyltransferase activity","type":"exact"},{"name":"ManNAcA transferase activity","type":"related"},{"name":"UDP-N-acetyl-beta-D-mannosaminouronate:lipopolysaccharide N-acetyl-beta-D-mannosaminouronosyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylmannosaminuronate-acetylglucosaminylpyrophosphorylundecaprenol acetylmannosaminuronosyltransferase activity","type":"related"}],"termid":"GO:0047241"}


id: PBO:0067105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 147, pseudogene","termid":"PBO:0067105"}


id: GO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-lactate from methylglyoxal, via the intermediate (R)-lactaldehyde.","definition_xrefs":["GOC:dph","GOC:go_curators","MetaCyc:MGLDLCTANA-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"D-lactate biosynthetic process from methylglyoxal via (R)-lactaldehyde","synonyms":[{"name":"D-lactate anabolism from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate formation from methylglyoxal via (R)-lactaldehyde","type":"exact"},{"name":"D-lactate synthesis from methylglyoxal via (R)-lactaldehyde","type":"exact"}],"termid":"GO:0019248"}


id: PBO:0050634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 4","termid":"PBO:0050634"}


id: RO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_ingredient","synonyms":[{"name":"has active pharmaceutical ingredient","type":"related"},{"name":"has active substance","type":"exact"}],"termid":"RO:0002248"}


id: GO:1905462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA duplex unwinding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"regulates","term_name":"DNA duplex unwinding","termid":"GO:0032508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of DNA duplex unwinding","synonyms":[{"name":"regulation of DNA unwinding","type":"exact"},{"name":"regulation of duplex DNA melting","type":"exact"}],"termid":"GO:1905462"}


id: PBO:0085400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein involved in maintaining membrane organization; involved in maintaining organization during stress conditions; induced by heat shock, oxidative stress, osmostress, stationary phase, glucose depletion, oleate and alcohol; protein abundance increased in response to DNA replication stress and dietary restriction; regulated by the HOG and Ras-Pka pathways; required for dietary restriction-induced lifespan extension","termid":"PBO:0085400"}


id: GO:0098518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide phosphatase activity (obsolete GO:0098518)","termid":"GO:0098518"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: PBO:0063965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pirin","termid":"PBO:0063965"}


id: PBO:0038527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 1","termid":"PBO:0038527"}


id: FYPO:0005353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal replication fork arrest at mating-type locus","synonyms":[{"name":"normal replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0005353"}


id: PBO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-43","termid":"PBO:0051457"}


id: PBO:0051729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 2","termid":"PBO:0051729"}


id: FYPO:0004189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hydroxyurea is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to hydroxyurea","synonyms":[{"name":"increased protein accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased protein level during cellular response to HU","type":"exact"},{"name":"increased protein level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0004189"}


id: PBO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 29 (pseudogene)","termid":"PBO:0045618"}


id: PBO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"battenin CLN3 family protein","termid":"PBO:0001310"}


id: SO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-covalent primer binding site for initiation of replication, transcription, or reverse transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_binding_site","termid":"SO:0001655"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer_binding_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_binding_site"],"synonyms":[{"name":"INSDC_feature:primer_bind","type":"exact"},{"name":"primer binding site","type":"exact"}],"termid":"SO:0005850"}


id: PBO:0027458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_morphology","termid":"PBO:0027458"}


id: MOD:01985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-asparagine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-asparagine.","definition_xrefs":["PubMed:21786372","RESID:AA0622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-asparagine residue","termid":"MOD:02060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-asparagine","synonyms":[{"name":"(2S)-2,4-diamino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-asparagine","type":"exact"}],"termid":"MOD:01985"}


id: GO:0086028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a bundle of His cardiomyocyte to a Purkinje myocyte.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte signaling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte signaling","type":"exact"},{"name":"bundle of His cardiac muscle cell to Purkinje myocyte signalling","type":"exact"}],"termid":"GO:0086028"}


id: PBO:0036239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga8","termid":"PBO:0036239"}


id: GO:0010854
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"adenylate cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010854","terms_by_termid":{"GO:0010856":null}}


id: PBO:0029330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation","termid":"PBO:0029330"}


id: PBO:0053440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 385","termid":"PBO:0053440"}


id: GO:0009132
data:
  {"annotated_genes":["SJAG_05314","SJAG_02135","SJAG_03828","SJAG_01595","SJAG_00605","SJAG_01310","SJAG_04192","SJAG_00885","SJAG_04657","SJAG_04665","SJAG_04849","SJAG_00779","SJAG_02247","SJAG_00461","SJAG_03676","SJAG_03660","SJAG_02369","SJAG_04048","SJAG_02038","SJAG_02796","SJAG_04495","SJAG_02874","SJAG_02009","SJAG_00027","SJAG_03373","SJAG_03852","SJAG_02945","SJAG_06622","SJAG_06621","SJAG_00633","SJAG_03903","SJAG_00685","SJAG_03977","SJAG_04334","SJAG_00839","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95340],"is_not":false,"summary":null,"term":"GO:0009132"},{"annotations":[93670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[101211,104710,104712,90134,100846,90604,104711,99074,98811,101212,93807,104714,93543,100844,104715,111515,100845,104716,76814,104713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[78863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[102619,88068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[102620,91073,88069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[70963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[97695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[84370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[106838,93727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72769,75445],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009134"},{"annotations":[108534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[78867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[75517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic process","termid":"GO:0006753"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_01595":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02247":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02874":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04657":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"nucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009132","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0006227":null,"GO:0006233":null,"GO:0006240":null,"GO:0006256":null,"GO:0009132":null,"GO:0009134":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0004098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore protein Ely5","termid":"PBO:0004098"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: GO:0001516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin metabolic process","termid":"GO:0006693"},{"relation_name":"is_a","term_name":"prostanoid biosynthetic process","termid":"GO:0046457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"prostaglandin biosynthetic process","synonyms":[{"name":"prostaglandin anabolism","type":"exact"},{"name":"prostaglandin biosynthesis","type":"exact"},{"name":"prostaglandin formation","type":"exact"},{"name":"prostaglandin synthesis","type":"exact"}],"termid":"GO:0001516"}


id: PBO:0084454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication","termid":"PBO:0084454"}


id: PBO:0110288
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named after human ortholog CAPRIN-1","termid":"PBO:0110288"}


id: PBO:0080239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 2","termid":"PBO:0080239"}


id: PR:O42901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC119.09c gene.","definition_xrefs":["UniProtKB:O42901","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.09c","synonyms":[{"name":"Spom972h-SPBC119.09c","type":"exact"}],"termid":"PR:O42901"}


id: GO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-malate + NAD+ = CO2 + NADH + pyruvate.","definition_xrefs":["RHEA:18365","EC:1.1.1.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate dehydrogenase activity","termid":"GO:0016615"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-malate dehydrogenase (decarboxylating) activity","secondary_identifiers":["MetaCyc:1.1.1.83-RXN","KEGG_REACTION:R00215"],"synonyms":[{"name":"(R)-malate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"D-malate dehydrogenase activity","type":"related"},{"name":"D-malic enzyme","type":"related"},{"name":"bifunctional L(+)-tartrate dehydrogenase-D(+)-malate (decarboxylating)","type":"related"}],"termid":"GO:0046553"}


id: PBO:0031558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_catalytic_activity","termid":"PBO:0031558"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["MetaCyc:2.5.1.63-RXN","RHEA:16661"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: GO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin thin filament length activity (obsolete GO:0003792)","synonyms":[{"name":"regulation of actin thin filament length activity","type":"exact"}],"termid":"GO:0003792"}


id: PBO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"targets correlated with Clr3 and Sir2 targets","termid":"PBO:0001405"}


id: GO:0047966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-sulfate + H2O = D-glucose + H+ + sulfate.","definition_xrefs":["EC:3.1.6.3","RHEA:19145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"glycosulfatase activity","secondary_identifiers":["MetaCyc:GLYCOSULFATASE-RXN","KEGG_REACTION:R00534"],"synonyms":[{"name":"glucosulfatase activity","type":"related"},{"name":"glycosulphatase activity","type":"exact"},{"name":"sugar-sulfate sulfohydrolase activity","type":"related"}],"termid":"GO:0047966"}


id: PR:Q9UTE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hri2 gene.","definition_xrefs":["UniProtKB:Q9UTE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2-alpha kinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.07c","synonyms":[{"name":"Spom972h-hri2","type":"exact"},{"name":"heme-regulated eukaryotic initiation factor eIF-2-alpha kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heme-regulated inhibitor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTE5"}


id: GO:0033302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of quercetin.","definition_xrefs":["MetaCyc:PWY-5321","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin O-glucoside metabolic process","synonyms":[{"name":"quercetin O-glucoside metabolism","type":"exact"}],"termid":"GO:0033302"}


id: GO:0034115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion involved in gastrulation","termid":"GO:0070587"},{"relation_name":"negatively_regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"}


id: GO:0098545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"is_a","term_name":"maintenance of protein complex location","termid":"GO:0098544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein complex location in cytoplasm","termid":"GO:0098545"}


id: PBO:0088148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter that mediates zinc transport into the vacuole; overexpression confers resistance to cobalt and rhodium; protein abundance increases in response to DNA replication stress; COT1 has a paralog, ZRC1, that arose from the whole genome duplication","termid":"PBO:0088148"}


id: PBO:0080705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 8A","termid":"PBO:0080705"}


id: PBO:0048737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 2","termid":"PBO:0048737"}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: GO:0031072
data:
  {"annotated_genes":["SJAG_03237","SJAG_03135","SJAG_00436","SJAG_00750","SJAG_00790","SJAG_01186","SJAG_03955","SJAG_04518","SJAG_03784","SJAG_01052","SJAG_01670","SJAG_04055","SJAG_00403","SJAG_01615","SJAG_01874","SJAG_01914","SJAG_01160","SJAG_03094"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63473,70340,70892,70975,71755,72362,72477,75238,78758],"is_not":false,"summary":null,"term":"GO:0031072"},{"annotations":[78394,76847,78591,67069,66539,58576,71224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030544"},{"annotations":[75823,75708,76850,78397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to a heat shock protein, a protein synthesized or activated in response to heat shock.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_00750":null,"SJAG_00790":null,"SJAG_01052":null,"SJAG_01160":null,"SJAG_01186":null,"SJAG_01615":null,"SJAG_01670":null,"SJAG_01874":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03237":null,"SJAG_03784":null,"SJAG_03955":null,"SJAG_04055":null,"SJAG_04518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heat shock protein binding","references_by_uniquename":{"GO_REF:0000002":null,"PMID:21873635":null},"termid":"GO:0031072","terms_by_termid":{"GO:0030544":null,"GO:0031072":null,"GO:0051879":null}}


id: PBO:0063076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase beta","termid":"PBO:0063076"}


id: GO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell aging (obsolete GO:0090343)","termid":"GO:0090343"}


id: PR:Q09154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit Rieske, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03211","PANTHER:PTHR10134:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit Rieske, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.06","secondary_identifiers":["UniProtKB:Q09154"],"synonyms":[{"name":"RISP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UQCRFS1","type":"exact"},{"name":"complex III subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rieske iron-sulfur protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase iron-sulfur subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09154"}


id: GO:0015685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-enterobactin, the iron-bound form of the siderophore enterobactin, is transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:23192658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0098771","GO:0051179"],"is_obsolete":false,"name":"ferric-enterobactin import into cell","synonyms":[{"name":"ferric-enterobactin transport","type":"broad"}],"termid":"GO:0015685"}


id: GO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosyl-(1->4)-beta-D-glucosyl-R + UDP-D-galactose = D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-R + H+ + UDP.","definition_xrefs":["EC:2.4.1.179","RHEA:18413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"beta-1,3-galactosyltransferase activity","termid":"GO:0048531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"lactosylceramide beta-1,3-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.179-RXN","KEGG_REACTION:R04431"],"synonyms":[{"name":"UDP-galactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-galactosyl-1,4-beta-D-glucosyl-R beta-1,3-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-lactosylceramide beta1->3-galactosyltransferase activity","type":"related"}],"termid":"GO:0047240"}


id: GO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the metanephros. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"metanephric nephron development","termid":"GO:0072210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in metanephric nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in metanephric nephron development","type":"exact"},{"name":"proximal/distal metanephric nephron patterning","type":"exact"}],"termid":"GO:0072272"}


id: FYPO:0008097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister chromatids partially separate in G2 arrest after glucose starvation (i.e. stationary phase).","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"separation of sister chromatids in stationary phase","termid":"FYPO:0008097"}


id: GO:0035906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the descending aorta over time, from its initial formation to the mature structure. The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries. In a two-pass circulatory system blood passes twice through the heart to supply the body once.","definition_xrefs":["UBERON:0001514","Wikipedia:Descending_aorta","GOC:bf","MA:0002571","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending aorta development","termid":"GO:0035906"}


id: PBO:0078329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-1","termid":"PBO:0078329"}


id: GO:2001120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methanofuran.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanofuran biosynthetic process","synonyms":[{"name":"methanofuran biosynthesis","type":"exact"}],"termid":"GO:2001120"}


id: GO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule principal cell. A Malpighian tubule principal cell is an epithelial secretory cell that transports cations into the lumen of the tubule.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule principal cell differentiation","termid":"GO:0061329"}


id: PBO:0073918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 7","termid":"PBO:0073918"}


id: SO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA less than 200 nucleotides long, usually with a specific secondary structure, that acts to regulate gene expression. These include short ncRNAs such as piRNA, miRNA and siRNAs (among others).","definition_xrefs":["PMID:28541282","PomBase:al","SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sncRNA","termid":"SO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small_regulatory_ncRNA","synonyms":[{"name":"small regulatory ncRNA","type":"exact"}],"termid":"SO:0000370"}


id: GO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one monocyte to one or more other monocytes via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"monocyte aggregation","synonyms":[{"name":"mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:0070487"}


id: PATO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A colour that is very pale yellowish brown.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light yellow brown","termid":"PATO:0002413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige","termid":"PATO:0002410"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PomBase:mah","PMID:18093330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: GO:0061499
data:
  {"annotated_genes":["SJAG_01464","SJAG_01188","SJAG_01215","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102459,104179,110632,112075],"is_not":false,"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the outer plaque is in the cytoplasm.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer plaque of spindle pole body","termid":"GO:0005824"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_01215":null,"SJAG_01464":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"outer plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061499","terms_by_termid":{"GO:0061499":null}}


id: GO:0019743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"hopanoid metabolic process","termid":"GO:0019744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"hopanoid catabolic process","synonyms":[{"name":"hopanoid breakdown","type":"exact"},{"name":"hopanoid catabolism","type":"exact"},{"name":"hopanoid degradation","type":"exact"}],"termid":"GO:0019743"}


id: GO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic fermentation beginning with the anaerobic conversion of glucose to pyruvate by the glycolytic pathway, continuing with pyruvate:ferredoxin oxidoreductase (PFOR) activity. This pathway is found in strict anaerobes such as Clostridia species.","definition_xrefs":["GOC:mengo_curators","PMID:20692761","PMID:20395274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycolytic fermentation via PFOR pathway","secondary_identifiers":["MetaCyc:CENTFERM-PWY"],"termid":"GO:0044813"}


id: PBO:0088876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase Cab2","termid":"PBO:0088876"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PBO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 4","termid":"PBO:0042420"}


id: GO:0120230
data:
  {"annotated_genes":["SJAG_04950","SJAG_03751"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84253,88510],"is_not":false,"summary":null,"term":"GO:0120230"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a recombinase.","definition_xrefs":["PMID:32414915","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"recombinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120230","terms_by_termid":{"GO:0120230":null}}


id: FYPO:0002046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to stress","synonyms":[{"name":"increased cell population growth during cellular response to stress","type":"exact"},{"name":"increased growth during cellular response to stress","type":"exact"},{"name":"resistant to stress","type":"exact"},{"name":"stress resistance: increased","type":"related"}],"termid":"FYPO:0002046"}


id: PBO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XVI alpha 1 chain","termid":"PBO:0043584"}


id: MOD:01443
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-glutamic acid residues and two L-histidine residues to tetrakis-L-glutamato bis-L-N1'-histidino lipid carboxylato manganese iron oxide.","definition_xrefs":["PubMed:19321420","RESID:AA0491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrakis-L-glutamato bis-L-N1'-histidino lipid carboxylato manganese iron oxide","termid":"MOD:01443"}


id: PBO:0011086
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae THI80","termid":"PBO:0011086"}


id: PBO:0051703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INPP5B antisense RNA 1","termid":"PBO:0051703"}


id: GO:0035975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["UniPathway:UPA00996","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamoyl phosphate catabolic process (obsolete GO:0035975)","synonyms":[{"name":"carbamoyl phosphate breakdown","type":"exact"},{"name":"carbamoyl phosphate catabolism","type":"exact"},{"name":"carbamoyl phosphate degradation","type":"exact"}],"termid":"GO:0035975"}


id: PBO:0050961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 3 pseudogene 1","termid":"PBO:0050961"}


