# terms

id: GO:0019289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhizobactin 1021, (E)-4-((3-(acetylhydroxyamino)propyl)-amino)-2-hydroxy-(2-(2-(3-(hydroxy(1-oxo-2-decenyl)amino)propyl)amino)-2-oxoethyl)-4-oxobutanoic acid, a siderophore produced by Sinorhizobium meliloti.","definition_xrefs":["PMID:11274118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"rhizobactin 1021 metabolic process","termid":"GO:0046494"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"rhizobactin 1021 biosynthetic process","secondary_identifiers":["MetaCyc:PWY-761","GO:0031194","GO:0031193"],"synonyms":[{"name":"rhizobactin 1021 anabolism","type":"exact"},{"name":"rhizobactin 1021 biosynthesis","type":"exact"},{"name":"rhizobactin 1021 biosynthetic process, peptide formation","type":"narrow"},{"name":"rhizobactin 1021 biosynthetic process, peptide modification","type":"narrow"},{"name":"rhizobactin 1021 formation","type":"exact"},{"name":"rhizobactin 1021 synthesis","type":"exact"}],"termid":"GO:0019289"}


id: PR:O42858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinoblastoma-binding protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.05c","secondary_identifiers":["UniProtKB:O42858"],"synonyms":[{"name":"COMPASS component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBBP5","type":"exact"},{"name":"complex proteins associated with set1 protein swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42858"}


id: GO:0010015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of roots are generated and organized. The root is the usually underground part of a seed plant body that originates from the hypocotyl, functions as an organ of absorption, aeration, and food storage or as a means of anchorage and support.","definition_xrefs":["GOC:sm","ISBN:0877797099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root morphogenesis","termid":"GO:0010015"}


id: PATO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxotrophic","termid":"PATO:0000422"}


id: GO:1904789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring maintenance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24115772"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic actomyosin contractile ring maintenance (obsolete GO:1904789)","synonyms":[{"name":"regulation of contractile ring maintenance involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, contractile ring maintenance, involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"exact"}],"termid":"GO:1904789"}


id: GO:1904684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:rph","GOC:BHF","GOC:BHF_miRNA","PMID:18591254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endopeptidase activity","termid":"GO:0010951"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"},{"relation_name":"is_a","term_name":"negative regulation of metallopeptidase activity","termid":"GO:1905049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metalloendopeptidase activity","synonyms":[{"name":"down regulation of metalloendopeptidase activity","type":"exact"},{"name":"down regulation of metalloendoprotease activity","type":"narrow"},{"name":"down regulation of metalloendoproteinase activity","type":"narrow"},{"name":"down-regulation of metalloendopeptidase activity","type":"exact"},{"name":"down-regulation of metalloendoprotease activity","type":"narrow"},{"name":"down-regulation of metalloendoproteinase activity","type":"narrow"},{"name":"downregulation of metalloendopeptidase activity","type":"exact"},{"name":"downregulation of metalloendoprotease activity","type":"narrow"},{"name":"downregulation of metalloendoproteinase activity","type":"narrow"},{"name":"inhibition of metalloendopeptidase activity","type":"narrow"},{"name":"inhibition of metalloendoprotease activity","type":"narrow"},{"name":"inhibition of metalloendoproteinase activity","type":"narrow"},{"name":"negative regulation of metalloendoprotease activity","type":"exact"},{"name":"negative regulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904684"}


id: GO:0009996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a specific cell fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate commitment","termid":"GO:0010454"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"negatively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell fate specification","synonyms":[{"name":"down regulation of cell fate specification","type":"exact"},{"name":"down-regulation of cell fate specification","type":"exact"},{"name":"downregulation of cell fate specification","type":"exact"},{"name":"inhibition of cell fate specification","type":"narrow"},{"name":"suppression of cell fate","type":"exact"}],"termid":"GO:0009996"}


id: MOD:00442
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N'-dimethylated L-arginine with secondary loss of an N,N'-carbodiimide molecular fragment.","definition_xrefs":["PubMed:15835918","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N'-dimethylated L-arginine with secondary neutral loss of N,N'-carbodiimide","synonyms":[{"name":"dCDI-NNMe2+Arg","type":"exact"}],"termid":"MOD:00442"}


id: GO:0002940
data:
  {"annotated_genes":["SJAG_04181","SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72961,99570],"is_not":false,"summary":null,"term":"GO:0002940"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in a tRNA is methylated at the N2 position of guanine.","definition_xrefs":["ISBN:1555811337","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00886":null,"SJAG_04181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA N2-guanine methylation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"tRNA m2-guanine biosynthesis","type":"related"}],"termid":"GO:0002940","terms_by_termid":{"GO:0002940":null}}


id: PBO:0066147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 3","termid":"PBO:0066147"}


id: PBO:0044889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1B","termid":"PBO:0044889"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: GO:0022897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"proton-dependent peptide secondary active transmembrane transporter activity","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"}],"termid":"GO:0022897"}


id: PR:Q9P7D3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.16c gene.","definition_xrefs":["UniProtKB:Q9P7D3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHI2-like protein P4H10.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.16c","synonyms":[{"name":"Spom972h-SPBP4H10.16c","type":"exact"}],"termid":"PR:Q9P7D3"}


id: GO:0043047
data:
  {"annotated_genes":["SJAG_04863","SJAG_02194","SJAG_04245","SJAG_05214","SJAG_02362","SJAG_01677","SJAG_00939","SJAG_03855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84924,91647,103469,105661,106794,106819,109810],"is_not":false,"summary":null,"term":"GO:0043047"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded telomere-associated DNA.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"},{"relation_name":"is_a","term_name":"sequence-specific single stranded DNA binding","termid":"GO:0098847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_02362":null,"SJAG_03855":null,"SJAG_04245":null,"SJAG_04863":null,"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"single-stranded telomeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"telomeric ssDNA binding","type":"exact"}],"termid":"GO:0043047","terms_by_termid":{"GO:0043047":null,"GO:0098505":null}}


id: SO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoding by frameshifting a particular site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_frameshifted","synonyms":[{"name":"translationally frameshifted","type":"exact"}],"termid":"SO:0000887"}


id: PBO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A7","termid":"PBO:0050479"}


id: PBO:0079461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 1","termid":"PBO:0079461"}


id: PATO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical entity inhering in a bearer by virtue of whether the bearer's molecules are being perceived by a taste and odorant receptors.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavor","termid":"PATO:0000043"}


id: GO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).","definition_xrefs":["GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system development","synonyms":[{"name":"skeletal development","type":"exact"}],"termid":"GO:0001501"}


id: PBO:0028680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_mating-type_region_heterochromatin","termid":"PBO:0028680"}


id: CHEBI:142517
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of (−)-borneol. A metabolite isolated from Ferula dissecta.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tschimganine","termid":"CHEBI:142517"}


id: GO:0099112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein driven by polymerization of a microtubule to which it is attached.","definition_xrefs":["PMID:11018050","GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"microtubule-based protein transport","termid":"GO:0099118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microtubule polymerization based protein transport","termid":"GO:0099112"}


id: FYPO:0005642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome biorientation is abnormal during meiosis, with chromosomes that are not correctly oriented with the kinetochores facing outwards. Homologous chromosome biorientation is the process in which the sister centromeres of one chromosome attach to microtubules that emanate from the same spindle pole, ensuring that homologous maternal and paternal chromosomes are pulled in opposite directions at anaphase of meiosis I.","definition_xrefs":["PMID:21920317","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic homologous chromosome biorientation","termid":"FYPO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore orientation","synonyms":[{"name":"abnormal homologous chromosome biorientation with abnormal kinetochore orientation during meiosis","type":"exact"},{"name":"abnormal homologous chromosome orientation involved in meiotic metaphase I plate congression with abnormal kinetochore orientation","type":"exact"},{"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore position","type":"exact"}],"termid":"FYPO:0005642"}


id: PBO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk13","termid":"PBO:0090119"}


id: GO:0010868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride biosynthetic process","termid":"GO:0010866"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride biosynthetic process","synonyms":[{"name":"negative regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010868"}


id: PBO:0071164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 3","termid":"PBO:0071164"}


id: PBO:0078486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 6-1","termid":"PBO:0078486"}


id: PBO:0090958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19","termid":"PBO:0090958"}


id: PBO:0038306
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_level","termid":"PBO:0038306"}


id: FYPO:0005894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"normal protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during G1 phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005894"}


id: PATO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000225 sensory function (obsolete PATO:0000225)","termid":"PATO:0000225"}


id: GO:0035095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a nicotine stimulus.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to nicotine","termid":"GO:0035094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to nicotine","synonyms":[{"name":"behavioural response to nicotine","type":"exact"}],"termid":"GO:0035095"}


id: GO:0070186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of growth hormone, a peptide hormone that is secreted by the anterior pituitary or the placenta into the circulation, and binds to membrane receptors in target tissues to stimulate body growth.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:11445442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0005515","GO:0003674","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"growth hormone activity","synonyms":[{"name":"GH activity","type":"exact"},{"name":"pituitary growth hormone activity","type":"narrow"},{"name":"placental growth hormone activity","type":"narrow"}],"termid":"GO:0070186"}


id: GO:0061349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac right atrium.","definition_xrefs":["GOC:dph","GOC:mtg_heart","PMID:19056682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"planar cell polarity pathway involved in heart morphogenesis","termid":"GO:0061346"},{"relation_name":"part_of","term_name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"planar cell polarity pathway involved in cardiac right atrium morphogenesis","termid":"GO:0061349"}


id: PBO:0028280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0028280"}


id: PBO:0109652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3116","termid":"PBO:0109652"}


id: MOD:00199
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a D-allo-isoleucine.","definition_xrefs":["ChEBI:30007","PubMed:8223491","RESID:AA0192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-allo-isoleucine","synonyms":[{"name":"(2R,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"D-Ile","type":"exact"},{"name":"D-allo-isoleucine","type":"exact"},{"name":"D-threo-isoleucine","type":"exact"},{"name":"MOD_RES D-allo-isoleucine","type":"exact"},{"name":"allo-D-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00199"}


id: GO:0031873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 proteinase activated receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 proteinase activated receptor binding","synonyms":[{"name":"type 2 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031873"}


id: PBO:0044614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 16","termid":"PBO:0044614"}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: PBO:0086114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cold tolerance; involved in phosphate uptake; YCR015C is not an essential gene","termid":"PBO:0086114"}


id: GO:1905962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glutamatergic neuron.","definition_xrefs":["GOC:TermGenie","GO_REF:0000086","PMID:24030726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glutamatergic neuron differentiation","termid":"GO:1905962"}


id: PBO:0017533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family phosphatidylinositol transmembrane transporter (predicted)","termid":"PBO:0017533"}


id: FYPO:0006354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription during glucose starvation","synonyms":[{"name":"abnormal transcription during cellular response to glucose starvation","type":"exact"},{"name":"abnormal transcription during glucose depletion","type":"exact"},{"name":"abnormal transcription during glucose deprivation","type":"exact"},{"name":"abnormal transcription during glucose limitation","type":"related"},{"name":"abnormal transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0006354"}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: GO:0099023
data:
  {"annotated_genes":["SJAG_02811","SJAG_01459","SJAG_03158","SJAG_03938","SJAG_05194","SJAG_04044","SJAG_02525","SJAG_03963","SJAG_04837","SJAG_01071","SJAG_01415","SJAG_04021","SJAG_01645","SJAG_00204","SJAG_03054","SJAG_03663","SJAG_01925","SJAG_02753","SJAG_02211","SJAG_00041","SJAG_05184","SJAG_01166","SJAG_04960","SJAG_02655","SJAG_03467","SJAG_00820","SJAG_04618","SJAG_00850","SJAG_04358","SJAG_03864","SJAG_02315","SJAG_00380","SJAG_02320","SJAG_03005","SJAG_02750","SJAG_02166","SJAG_00578","SJAG_01598","SJAG_04902","SJAG_03357","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85892,112030,113496,95795,95737,100049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033263"},{"annotations":[106904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[95046,112828,97383,86442,75287,113884,109365,76546,70941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000145"},{"annotations":[70162,77500,92710,78356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000938"},{"annotations":[111977,104810,74904,101534,70604,76367,84712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017119"},{"annotations":[105128,85085,84423,97973,92865,94633,74424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990070"},{"annotations":[105129,98800,94634,95254,97974,85086,84424,74425,71509,92866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990071"},{"annotations":[92867,73341,76666,97975,94635,74426,84425,105130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990072"},{"annotations":[100051,113499,89925,76155,95740,95799,71449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"Any protein complex that plays a role in vesicle tethering.","definition_xrefs":["GOC:dos","PMID:27243008","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00578":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_01071":null,"SJAG_01166":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02211":null,"SJAG_02315":null,"SJAG_02320":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_03005":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03357":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03963":null,"SJAG_04021":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04618":null,"SJAG_04837":null,"SJAG_04902":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"vesicle tethering complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0099023","terms_by_termid":{"GO:0000145":null,"GO:0000938":null,"GO:0017119":null,"GO:0033263":null,"GO:0070939":null,"GO:1902500":null,"GO:1990070":null,"GO:1990071":null,"GO:1990072":null}}


id: PBO:0057625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1199","termid":"PBO:0057625"}


id: GO:0090695
data:
  {"annotated_genes":["SJAG_02606","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83657,105837],"is_not":false,"summary":null,"term":"GO:0090695"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved heterodimeric protein complex (comprising Wings apart-like protein and the Pds5 Armadillo repeat cohesin associated protein) involved in the loading and unloading of a cohesin complex onto DNA.","definition_xrefs":["GOC:vw","PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMC loading complex","termid":"GO:0032116"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Wpl/Pds5 cohesin loading/unloading complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090695","terms_by_termid":{"GO:0090695":null}}


id: PBO:0084933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA N6-adenosine methyltransferase; essential for meiosis in S288C but dispensable for meiosis in SK1, mediates N6-adenosine methylation of bulk mRNA during the induction of sporulation which includes the meiotic regulators IME1, IME2 and IME4 itself; repressed in haploids via production of antisense IME4 transcripts; transcribed in diploid cells where antisense transcription is repressed; orthologous to human METTL3 (MT-A70)","termid":"PBO:0084933"}


id: PBO:0083256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; largely overlaps verified gene RPL43A/YPR043W; deletion confers sensitivity to GSAO","termid":"PBO:0083256"}


id: GO:1905253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of epidermal growth factor receptor signaling pathway that is involved in heart process.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:TermGenie","PMID:23069713","GO_REF:0000060","GOC:BHF_miRNA"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of epidermal growth factor receptor signaling pathway involved in heart process (obsolete GO:1905253)","synonyms":[{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"}],"termid":"GO:1905253"}


id: GO:1902488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a cholangiocyte.","definition_xrefs":["GOC:TermGenie","PMID:22961800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte apoptotic process","synonyms":[{"name":"cholangiocyte apoptosis","type":"narrow"},{"name":"epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1902488"}


id: PBO:0064228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCG1 antisense RNA 1","termid":"PBO:0064228"}


id: PBO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 12","termid":"PBO:0050388"}


id: FYPO:0002070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in the normal location at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal nucleus positioning","termid":"FYPO:0001389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal nucleus location","synonyms":[{"name":"normal nuclear location","type":"exact"},{"name":"normal nucleus location during mitotic cell cycle","type":"related"},{"name":"normal nucleus location during vegetative growth","type":"exact"},{"name":"normal nucleus position","type":"exact"},{"name":"normally localized nucleus","type":"exact"}],"termid":"FYPO:0002070"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: PBO:0049125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member B","termid":"PBO:0049125"}


id: PBO:0069916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1208, pseudogene","termid":"PBO:0069916"}


id: GO:0010659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a cardiac muscle cell and result in its death. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","CL:0000746","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle cell apoptotic process","termid":"GO:0010658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell apoptotic process","synonyms":[{"name":"cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010659"}


id: PBO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hydroxy Urea Sensitive","termid":"PBO:0000620"}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: PBO:0084387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low affinity NH4+ transporter; member of the DHA2 family of drug:H+ anti porters; putative paralog of ATR1; but not required for boron tolerance; non-essential gene","termid":"PBO:0084387"}


id: PBO:0027137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_glucose_starvation","termid":"PBO:0027137"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.11","RHEA:21444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["MetaCyc:COUMARATE-REDUCTASE-RXN","KEGG_REACTION:R03709"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: GO:0007579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence factor accumulation (obsolete GO:0007579)","synonyms":[{"name":"senescence factor accumulation","type":"exact"}],"termid":"GO:0007579"}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76250],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R02874","Reactome:R-HSA-191299","EC:1.14.14.17","MetaCyc:SQUALENE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: GO:1905370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serine-type endopeptidase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:1689240","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type peptidase complex","termid":"GO:1905286"},{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"serine-type endopeptidase complex","termid":"GO:1905370"}


id: GO:0060949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac vascular smooth muscle cell fate and its capacity to differentiate into a cardiac vascular smooth muscle cell.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"},{"relation_name":"part_of","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac vascular smooth muscle cell fate commitment","synonyms":[{"name":"heart vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0060949"}


id: PBO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_extension","termid":"PBO:0006165"}


id: PBO:0049343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 1","termid":"PBO:0049343"}


id: FYPO:0005359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at the RTS1 replication fork barrier is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:12840005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal termination of RNA polymerase II transcription","termid":"FYPO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000294","FYPO:0000257"],"is_obsolete":false,"name":"normal termination of RNA polymerase II transcription at RTS1 barrier","synonyms":[{"name":"normal RNA polymerase II release at RTS1 barrier","type":"related"},{"name":"normal RNA polymerase II transcription termination at RTS1 barrier","type":"exact"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"normal termination of RNA polymerase II transcription at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005359"}


id: GO:0071427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains messenger RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071427)","synonyms":[{"name":"mRNA-containing RNP export from nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"mRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071427"}


id: GO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the aortic bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003033"}


id: SO:0001587
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed, resulting in a premature stop codon, leading to a shortened polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_gained","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://ensembl.org/info/genome/variation/prediction/predicted_data.html","http://snpeff.sourceforge.net/SnpEff_manual.html","loinc:LA6699-8","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"ANNOVAR:stopgain","type":"exact"},{"name":"Jannovar:stop_gained","type":"exact"},{"name":"Seattleseq:stop-gained","type":"exact"},{"name":"Seattleseq:stop-gained-near-splice","type":"related"},{"name":"VAAST:stop_gained","type":"exact"},{"name":"VAT:prematureStop","type":"exact"},{"name":"VEP:stop_gained","type":"exact"},{"name":"nonsense","type":"exact"},{"name":"nonsense codon","type":"exact"},{"name":"snpEff:STOP_GAINED","type":"exact"},{"name":"stop codon gained","type":"related"},{"name":"stop gained","type":"exact"}],"termid":"SO:0001587"}


id: PBO:0059274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 3","termid":"PBO:0059274"}


id: PBO:0071986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 15","termid":"PBO:0071986"}


id: GO:0002520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system whose objective is to provide calibrated responses by an organism to a potential internal or invasive threat, over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:add","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system development","termid":"GO:0002520"}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: GO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A thylakoid; as in, but not restricted to, the purple bacteria and relatives (Proteobacteria, ncbi_taxonomy_id:1224).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete thylakoid (sensu Proteobacteria) (obsolete GO:0030074)","synonyms":[{"name":"thylakoid (sensu Proteobacteria)","type":"exact"}],"termid":"GO:0030074"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: GO:0051472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucosylglycerol metabolic process","synonyms":[{"name":"glucosylglycerol metabolism","type":"exact"}],"termid":"GO:0051472"}


id: PBO:0049128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRC5D and HEBP1 antisense RNA 1","termid":"PBO:0049128"}


id: GO:0030570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuronosyl groups at their non-reducing ends.","definition_xrefs":["EC:4.2.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"pectate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.2-RXN"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan lyase activity","type":"related"},{"name":"PGA lyase activity","type":"related"},{"name":"PPase-N activity","type":"related"},{"name":"alpha-1,4-D-endopolygalacturonic acid lyase activity","type":"related"},{"name":"endo-alpha-1,4-polygalacturonic acid lyase activity","type":"related"},{"name":"endogalacturonate transeliminase activity","type":"related"},{"name":"endopectin methyltranseliminase activity","type":"related"},{"name":"pectate transeliminase activity","type":"related"},{"name":"pectic acid lyase activity","type":"related"},{"name":"pectic acid transeliminase activity","type":"related"},{"name":"pectic lyase activity","type":"broad"},{"name":"pectin trans-eliminase activity","type":"broad"},{"name":"polygalacturonate lyase activity","type":"related"},{"name":"polygalacturonic acid lyase activity","type":"related"},{"name":"polygalacturonic acid trans-eliminase activity","type":"related"},{"name":"polygalacturonic transeliminase activity","type":"related"}],"termid":"GO:0030570"}


id: PBO:0003555
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Arrest Deficient","termid":"PBO:0003555"}


id: PR:Q10415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermediate peptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11804:SF5","PRO:DNx","OMA:SCHPO00249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.10c","secondary_identifiers":["UniProtKB:Q10415"],"synonyms":[{"name":"MIP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MIPEP","type":"exact"},{"name":"octapeptidyl aminopeptidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10415"}


id: PBO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 3","termid":"PBO:0045301"}


id: GO:0062104
data:
  {"annotated_genes":["SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100313],"is_not":false,"summary":null,"term":"GO:0062104"}]},"cv_name":"molecular_function","definition":"Binding to a region of RNA containing a Pumilio-response element element. The consensus sequence for the element is UGUAAAUA.","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pumilio-response element binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PRE binding","type":"exact"}],"termid":"GO:0062104","terms_by_termid":{"GO:0062104":null}}


id: GO:0003119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of epinephrine released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by epinephrine","termid":"GO:0003115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by neuronal epinephrine","synonyms":[{"name":"regulation of vasoconstriction by neuronal adrenaline","type":"exact"}],"termid":"GO:0003119"}


id: GO:0008267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyglutamine tract, i.e. a series of consecutive glutamine residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"poly-glutamine tract binding","termid":"GO:0008267"}


id: PBO:0082177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082177"}


id: GO:0061821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a telomeric D-loop. A telomeric D-loop is a three-stranded DNA displacement loop that forms at the site where the telomeric 3' single-stranded DNA overhang (formed of the repeat sequence TTAGGG in mammals) is tucked back inside the double-stranded component of telomeric DNA molecule, thus forming a t-loop or telomeric-loop and protecting the chromosome terminus.","definition_xrefs":["GOC:nc","GOC:BHF","PMID:19734539","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-loop DNA binding","termid":"GO:0062037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"telomeric D-loop binding","synonyms":[{"name":"telomeric Displacement-loop binding","type":"exact"}],"termid":"GO:0061821"}


id: PBO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1 (predicted)","termid":"PBO:0004187"}


id: PBO:0003552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 3'-tRNA processing endonuclease Trz2","termid":"PBO:0003552"}


id: PBO:0047195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member C, pseudogene","termid":"PBO:0047195"}


id: PBO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wings apart-like homolog Wpl1","termid":"PBO:0003207"}


id: GO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: norspermine + oxygen + H2O = norspermidine + 3-aminopropanal + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-10464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"norspermine:oxygen oxidoreductase activity","secondary_identifiers":["RHEA:25816","EC:1.5.3.16"],"synonyms":[{"name":"norspermine oxidase activity","type":"broad"}],"termid":"GO:0052894"}


id: GO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to a sound.","definition_xrefs":["GOC:pr","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory behavior","termid":"GO:0007638"},{"relation_name":"part_of","term_name":"response to auditory stimulus","termid":"GO:0010996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory behavior","synonyms":[{"name":"auditory behaviour","type":"exact"},{"name":"behavioral response to sound","type":"exact"},{"name":"behavioural response to sound","type":"exact"}],"termid":"GO:0031223"}


id: GO:0120305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigmentation","termid":"GO:0120305"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: PBO:0029138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methionine","termid":"PBO:0029138"}


id: FYPO:0006940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is radially asymmetric.","definition_xrefs":["PMID:30709916","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000032","FYPO:0000631"],"is_obsolete":false,"name":"asymmetric protein localization to actomyosin contractile ring","synonyms":[{"name":"abnormal protein distribution within the actomyosin contractile ring","type":"related"},{"name":"asymmetric protein localisation to actomyosin contractile ring","type":"exact"},{"name":"asymmetric protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"asymmetric protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"asymmetric protein recruitment to actomyosin contractile ring","type":"related"},{"name":"inhomogeneous protein localisation to actomyosin contractile ring","type":"exact"},{"name":"inhomogeneous protein localization to actomyosin contractile ring","type":"exact"},{"name":"non-homogeneous protein localization to actomyosin contractile ring","type":"exact"},{"name":"uneven protein localization to actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0006940"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: GO:0009628
data:
  {"annotated_genes":["SJAG_04190","SJAG_04187","SJAG_04567","SJAG_01150","SJAG_04726","SJAG_00221","SJAG_04018","SJAG_00208","SJAG_00642","SJAG_04877","SJAG_03185","SJAG_02258","SJAG_04668","SJAG_02182","SJAG_03893","SJAG_02592","SJAG_04150","SJAG_02818","SJAG_02334","SJAG_00436","SJAG_04791","SJAG_02200","SJAG_03898","SJAG_03527","SJAG_00409","SJAG_00814","SJAG_01084","SJAG_01010","SJAG_04205","SJAG_02091","SJAG_01648","SJAG_05242","SJAG_01186","SJAG_04388","SJAG_00596","SJAG_03815","SJAG_04055","SJAG_02883","SJAG_02342","SJAG_00661","SJAG_02381","SJAG_02860","SJAG_00863","SJAG_00272","SJAG_00729","SJAG_02199","SJAG_01262","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[77785,99746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[88035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[114565,114566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[85239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[100382,105305,110660,105306,110659,91278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[112121,96706,105156,106968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[112208,89975,99951,105631,111445,91553,87543,109672,98238,101876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[95664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071502"},{"annotations":[103782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"},{"annotations":[76001,104434,98272,90821],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[76918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009314"},{"annotations":[102355,89584,101330,107521,108063,89283,70215,83795,92687,99660,85306,90652,90856,91600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (not derived from living organisms) stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00221":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00436":null,"SJAG_00596":null,"SJAG_00642":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01150":null,"SJAG_01186":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02258":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_04018":null,"SJAG_04055":null,"SJAG_04150":null,"SJAG_04187":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04388":null,"SJAG_04567":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null,"PMID:23873862":null},"synonyms":[{"name":"response to abiotic stress","type":"narrow"}],"termid":"GO:0009628","terms_by_termid":{"GO:0009314":null,"GO:0009785":null,"GO:0034605":null,"GO:0050982":null,"GO:0070370":null,"GO:0070914":null,"GO:0071456":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:0071502":null,"GO:1904161":null}}


id: GO:0097398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-17","termid":"GO:0097396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-17","synonyms":[{"name":"cellular response to IL-17","type":"exact"}],"termid":"GO:0097398"}


id: PBO:0066699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog B","termid":"PBO:0066699"}


id: PR:Q9Y7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.04c gene.","definition_xrefs":["UniProtKB:Q9Y7P8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C191.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.04c","synonyms":[{"name":"Spom972h-SPCC191.04c","type":"exact"}],"termid":"PR:Q9Y7P8"}


id: PBO:0091144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mini protein, single membrane pass Min8, meiosis specific splicing in fission yeast","termid":"PBO:0091144"}


id: GO:0060250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within the germ-line stem-cell niche. This includes control of cellular proliferation and death and control of metabolic function that allows the niche to continue to function. A gem-line stem-cell niche is an anatomical structure that regulates how germ-line stem-cells are used and saves them from depletion.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem-cell niche homeostasis","synonyms":[{"name":"germ-line stem-cell niche maintenance","type":"exact"},{"name":"maintenance of germ line stem cell niche","type":"exact"},{"name":"maintenance of germ line stem-cell niche","type":"exact"},{"name":"maintenance of germ-line stem cell niche","type":"exact"},{"name":"maintenance of germ-line stem-cell niche","type":"exact"}],"termid":"GO:0060250"}


id: GO:0046865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of terpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Terpenoids are a class of compounds characterized by an isoprenoid chemical structure and include derivatives with various functional groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid transport","termid":"GO:0046864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"terpenoid transport","termid":"GO:0046865"}


id: GO:0110059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA","PMID:23072816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell differentiation","termid":"GO:0045602"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell differentiation","termid":"GO:0110059"}


id: GO:1903968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a micafungin stimulus.","definition_xrefs":["GO_REF:0000071","PMID:16928959","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to peptide","termid":"GO:1901653"},{"relation_name":"is_a","term_name":"response to micafungin","termid":"GO:1903967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to micafungin","termid":"GO:1903968"}


id: GO:0061048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the process in which a highly ordered sequence of patterning events generates the branched structures of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"epithelial tube branching involved in lung morphogenesis","termid":"GO:0060441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of branching involved in lung morphogenesis","termid":"GO:0061048"}


id: PBO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin ligase E3 (predicted)","termid":"PBO:0015240"}


id: PBO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 29","termid":"PBO:0072059"}


id: PBO:0065029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 5","termid":"PBO:0065029"}


id: FYPO:0001693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to reversine. Cells stop growing (and may die) at a concentration of reversine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to reversine","synonyms":[{"name":"hypersensitive to reversine","type":"exact"},{"name":"sensitive to reversine during mitotic cell cycle","type":"related"},{"name":"sensitive to reversine during vegetative growth","type":"exact"}],"termid":"FYPO:0001693"}


id: PBO:0069734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1015, pseudogene","termid":"PBO:0069734"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: GO:0035254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glutamate receptor.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"glutamate receptor binding","termid":"GO:0035254"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: PBO:0068851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 89, pseudogene","termid":"PBO:0068851"}


id: PBO:0028089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3_acetylation_at_centromere_central_core","termid":"PBO:0028089"}


id: PBO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-BoX protein","termid":"PBO:0001044"}


id: GO:0051887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of exogen","synonyms":[{"name":"regulation of exogen","type":"related"}],"termid":"GO:0051887"}


id: PBO:0027885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_trimethylation","termid":"PBO:0027885"}


id: PBO:0068629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 9, pseudogene","termid":"PBO:0068629"}


id: GO:0098727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which the numbers of cells of a particular type or in a tissue are maintained.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of cell number","termid":"GO:0098727"}


id: PBO:0066125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 4","termid":"PBO:0066125"}


id: PBO:0068263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N5","termid":"PBO:0068263"}


id: PBO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIc (gene/pseudogene)","termid":"PBO:0047447"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: PATO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveate","synonyms":[{"name":"foveolate","type":"related"},{"name":"pitted","type":"related"}],"termid":"PATO:0002296"}


id: PBO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor alpha","termid":"PBO:0072718"}


id: PBO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein","termid":"PBO:0048727"}


id: PBO:0001874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA","termid":"PBO:0001874"}


id: GO:1990924
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The lipid bilayer surrounding the amphisome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:bhm","PMID:17984323"],"gene_count":0,"genotype_count":0,"name":"obsolete amphisome membrane (obsolete GO:1990924)","synonyms":[{"name":"amphisomal membrane","type":"exact"}],"termid":"GO:1990924"}


id: PBO:0063446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE7A divergent transcript","termid":"PBO:0063446"}


id: PBO:0041660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 5","termid":"PBO:0041660"}


id: GO:0019808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polyamine, an organic compound containing two or more amino groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"polyamine binding","termid":"GO:0019808"}


id: FYPO:0002813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to salt stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation during cellular response to salt stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002813"}


id: PBO:0068743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 6, pseudogene","termid":"PBO:0068743"}


id: GO:0048836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the number of petals produced in a developing flower.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of petal number","termid":"GO:0048834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of increased petal number","termid":"GO:0048836"}


id: PR:Q09691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrf1 gene.","definition_xrefs":["UniProtKB:Q09691","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide chain release factor 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.17","synonyms":[{"name":"MRF-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MtRF-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mrf1","type":"exact"}],"termid":"PR:Q09691"}


id: MOD:01071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a diphenylmethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphenylmethyl modified residue","synonyms":[{"name":"Dpm","type":"exact"}],"termid":"MOD:01071"}


id: PBO:0034107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounded_by","termid":"PBO:0034107"}


id: PBO:0053809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1068","termid":"PBO:0053809"}


id: PBO:0065040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 5","termid":"PBO:0065040"}


id: PBO:0090513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase 34 family","termid":"PBO:0090513"}


id: PBO:0076889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 43","termid":"PBO:0076889"}


id: PBO:0013748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25 (predicted)","termid":"PBO:0013748"}


id: PBO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITIH4 antisense RNA 1","termid":"PBO:0051933"}


id: PR:O13716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- agn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan endo-1,3-alpha-glucosidase agn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.09","synonyms":[{"name":"Spom972h-agn1","type":"exact"},{"name":"endo-1,3-alpha-glucanase agn1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13716"}


id: PBO:0070999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 1","termid":"PBO:0070999"}


id: MOD:00848
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a particular compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent derivatized residue","termid":"MOD:00848"}


id: PBO:0002952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein Dss1","termid":"PBO:0002952"}


id: FYPO:0004044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and is elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell","synonyms":[{"name":"elongated tetranucleate cells during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell","type":"exact"}],"termid":"FYPO:0004044"}


id: PR:O14161
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf21 gene.","definition_xrefs":["UniProtKB:O14161","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.09c","synonyms":[{"name":"Spom972h-cwf21","type":"exact"},{"name":"complexed with cdc5 protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14161"}


id: PBO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus3","termid":"PBO:0090037"}


id: PBO:0046914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 30 member A","termid":"PBO:0046914"}


id: GO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002924"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"negative regulation of complement activation","termid":"GO:0045916"},{"relation_name":"negatively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of complement activation, classical pathway","synonyms":[{"name":"down regulation of complement activation, classical pathway","type":"exact"},{"name":"down-regulation of complement activation, classical pathway","type":"exact"},{"name":"downregulation of complement activation, classical pathway","type":"exact"},{"name":"inhibition of complement activation, classical pathway","type":"narrow"},{"name":"negative regulation of complement cascade, classical pathway","type":"exact"}],"termid":"GO:0045959"}


id: PR:O13788
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr1 gene.","definition_xrefs":["UniProtKB:O13788","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.10","synonyms":[{"name":"Spom972h-ssr1","type":"exact"}],"termid":"PR:O13788"}


id: PBO:0047971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRAS1 related extracellular matrix 3","termid":"PBO:0047971"}


id: PBO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2 (predicted)","termid":"PBO:0002493"}


id: PATO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow brown","termid":"PATO:0002411"}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["EC:3.1.2.19","MetaCyc:3.1.2.19-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: GO:0051203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of peptidyl-aspartic acid to form peptidyl-L-aspartyl aldehyde, as found photosystem II P680 chlorophyll A apoprotein.","definition_xrefs":["PMID:15237995","RESID:AA0373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid reduction to form L-aspartyl aldehyde","synonyms":[{"name":"peptidyl-aspartic acid reduction to form L-aspartate-beta-semialdehyde","type":"exact"},{"name":"peptidyl-aspartic acid reduction to form L-beta-formylalanine","type":"exact"}],"termid":"GO:0051203"}


id: GO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetraterpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetraterpenoids are terpenoids with eight isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tetraterpenoid transport","termid":"GO:0046866"}


id: GO:0005131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"hormone receptor binding","termid":"GO:0051427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"growth hormone receptor binding","synonyms":[{"name":"growth hormone","type":"narrow"},{"name":"growth hormone receptor ligand","type":"narrow"}],"termid":"GO:0005131"}


id: GO:1901737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"(R)-mevalonic acid metabolic process","termid":"GO:1901735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid biosynthetic process","synonyms":[{"name":"(R)-mevalonate anabolism","type":"exact"},{"name":"(R)-mevalonate biosynthesis","type":"exact"},{"name":"(R)-mevalonate synthesis","type":"exact"},{"name":"(R)-mevalonic acid anabolism","type":"exact"},{"name":"(R)-mevalonic acid biosynthesis","type":"exact"},{"name":"(R)-mevalonic acid formation","type":"exact"},{"name":"(R)-mevalonic acid synthesis","type":"exact"}],"termid":"GO:1901737"}


id: GO:0002795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"negative regulation of peptide secretion","termid":"GO:0002792"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"negatively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial peptide secretion","synonyms":[{"name":"down regulation of antimicrobial peptide secretion","type":"exact"},{"name":"down-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"downregulation of antimicrobial peptide secretion","type":"exact"},{"name":"inhibition of antimicrobial peptide secretion","type":"narrow"}],"termid":"GO:0002795"}


id: GO:0070470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A respiratory chain located in the plasma membrane of a cell; made up of the protein complexes that form the electron transport system (the respiratory chain), associated with the plasma membrane. The respiratory chain complexes transfer electrons from an electron donor to an electron acceptor and are associated with a proton pump to create a transmembrane electrochemical gradient.","definition_xrefs":["ISBN:0198547684","GOC:curators","GOC:imk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respirasome","termid":"GO:0070469"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasma membrane respirasome","synonyms":[{"name":"plasma membrane electron transport chain","type":"exact"},{"name":"plasma membrane respiratory chain","type":"exact"}],"termid":"GO:0070470"}


id: GO:0034542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trimethylarsine oxide + 2 H+ + 2 e- = trimethylarsine + H2O.","definition_xrefs":["UM-BBD_reactionID:r0807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trimethylarsine oxidase activity","secondary_identifiers":["EC:1.97.1.-"],"termid":"GO:0034542"}


id: PBO:0052279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 6A","termid":"PBO:0052279"}


id: GO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.","definition_xrefs":["RESID:AA0075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dimethylation","termid":"GO:0018027"}


id: PBO:0085950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant exhibits a respiratory growth defect and synthetic interactions with prohibitin (phb1) and gem1; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085950"}


id: GO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the volume of a multivesicular body as part of the directed movement of substances from endosomes to lysosomes or vacuoles.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multivesicular body size","termid":"GO:0010796"},{"relation_name":"part_of","term_name":"endosome transport via multivesicular body sorting pathway","termid":"GO:0032509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of multivesicular body size involved in endosome transport","termid":"GO:0010797"}


id: PBO:0044016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 epsilon","termid":"PBO:0044016"}


id: PBO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FZD10 antisense divergent transcript","termid":"PBO:0048166"}


id: PBO:0029019
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029019"}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: GO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzo(a)pyrene-cis-7,8-dihydrodiol + O2 = cis-4-(7-hydroxypyren-8-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"7,8-dihydroxy benzo(a)pyrene dioxygenase activity","secondary_identifiers":["EC:1.13.11.-"],"termid":"GO:0034814"}


id: PBO:0061241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP56 ribonucleoprotein pseudogene 2","termid":"PBO:0061241"}


id: PR:O13961
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut11 gene.","definition_xrefs":["UniProtKB:O13961","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein ndc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.03","synonyms":[{"name":"Spom972h-cut11","type":"exact"},{"name":"cell untimely torn protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13961"}


id: GO:0090221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0007010","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mitotic spindle-templated microtubule nucleation","termid":"GO:0090221"}


id: PBO:0029030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029030"}


id: GO:0003934
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70374],"is_not":false,"summary":null,"term":"GO:0003934"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = formate + 7,8-dihydroneopterin 3'-triphosphate.","definition_xrefs":["EC:3.5.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"GTP cyclohydrolase I activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:GTP-CYCLOHYDRO-I-RXN","RHEA:17473","Reactome:R-HSA-1474146","KEGG_REACTION:R00424"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase activity","type":"related"},{"name":"GTP 8-formylhydrolase activity","type":"related"},{"name":"dihydroneopterin triphosphate synthase activity","type":"related"},{"name":"guanosine triphosphate 8-deformylase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase activity","type":"related"}],"termid":"GO:0003934","terms_by_termid":{"GO:0003934":null}}


id: PBO:0044814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108C","termid":"PBO:0044814"}


id: PBO:0064739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 75","termid":"PBO:0064739"}


id: GO:1901185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"negatively_regulates","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERBB signaling pathway","synonyms":[{"name":"down regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down regulation of EGFR family signaling pathway","type":"related"},{"name":"down regulation of ERBB signaling pathway","type":"exact"},{"name":"down regulation of ERBB signalling pathway","type":"exact"},{"name":"down regulation of ErbB signaling","type":"exact"},{"name":"down-regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"down-regulation of EGFR family signaling pathway","type":"related"},{"name":"down-regulation of ERBB signaling pathway","type":"exact"},{"name":"down-regulation of ERBB signalling pathway","type":"exact"},{"name":"down-regulation of ErbB signaling","type":"exact"},{"name":"downregulation of EGF receptor family signaling pathway","type":"exact"},{"name":"downregulation of EGFR family signaling pathway","type":"related"},{"name":"downregulation of ERBB signaling pathway","type":"exact"},{"name":"downregulation of ERBB signalling pathway","type":"exact"},{"name":"downregulation of ErbB signaling","type":"exact"},{"name":"inhibition of EGF receptor family signaling pathway","type":"exact"},{"name":"inhibition of EGFR family signaling pathway","type":"related"},{"name":"inhibition of ERBB signaling pathway","type":"narrow"},{"name":"inhibition of ERBB signalling pathway","type":"exact"},{"name":"inhibition of ErbB signaling","type":"exact"},{"name":"negative regulation of EGF receptor family signaling pathway","type":"exact"},{"name":"negative regulation of EGFR family signaling pathway","type":"related"},{"name":"negative regulation of ERBB signalling pathway","type":"exact"},{"name":"negative regulation of ErbB signaling","type":"exact"}],"termid":"GO:1901185"}


id: GO:1903102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate.","definition_xrefs":["PMID:19037259","GOC:bhm","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process","termid":"GO:1903100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthetic process","synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate anabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate biosynthesis","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate formation","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1903102"}


id: PBO:0081292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75a","termid":"PBO:0081292"}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: PBO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.39","termid":"PBO:0002281"}


id: GO:0021791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dgh","PMID:14699587","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"},{"relation_name":"is_a","term_name":"chemoattraction of branchiomotor axon","termid":"GO:0021792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of branchiomotor neuron axon in branchial arch mesenchyme","synonyms":[{"name":"positive chemotaxis of branchiomotor neuron axon in branchial arch mesenchyme","type":"exact"}],"termid":"GO:0021791"}


id: PBO:0058963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 6, pseudogene","termid":"PBO:0058963"}


id: FYPO:0003090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic rDNA repeat spacer occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at rDNA repeats","termid":"FYPO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased replication fork arrest at rDNA repeats","synonyms":[{"name":"decreased replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"decreased replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"reduced replication fork arrest at rDNA repeats","type":"exact"}],"termid":"FYPO:0003090"}


id: GO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction maintenance","termid":"GO:0034334"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: PBO:0089171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBP4H10.18c ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089171"}


id: PBO:0055709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb development membrane protein 1","termid":"PBO:0055709"}


id: PBO:0070666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 37","termid":"PBO:0070666"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: PBO:0091612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase/lipase, implicated in cellular detoxification","termid":"PBO:0091612"}


id: PATO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having only one phase or stage.","definition_xrefs":["hefreedictionary.com:hefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monophasic","termid":"PATO:0001773"}


id: PBO:0034745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, implicated in vesicle-mediated transport (predicted)","termid":"PBO:0034745"}


id: GO:0010547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the thylakoid membrane in the context of a normal process.","definition_xrefs":["PMID:17416733","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid membrane organization","termid":"GO:0010027"},{"relation_name":"is_a","term_name":"membrane disassembly","termid":"GO:0030397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"thylakoid membrane disassembly","synonyms":[{"name":"thylakoid membrane degradation","type":"exact"}],"termid":"GO:0010547"}


id: FYPO:0003122
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to DNA damage","termid":"FYPO:0002897"},{"relation_name":"is_a","term_name":"decreased protein autophosphorylation during vegetative growth","termid":"FYPO:0003298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein autophosphorylation during cellular response to DNA damage","synonyms":[{"name":"decreased protein autophosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased protein autophosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced protein autophosphorylation during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0003122"}


id: PBO:0039717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3A","termid":"PBO:0039717"}


id: GO:0042748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"All sleep stages in the circadian sleep/wake cycle other than REM sleep. These stages are characterized by a slowing of brain waves and other physiological functions.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, non-REM sleep","termid":"GO:0042748"}


id: GO:1903257
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99058,106798],"is_not":false,"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of selenoneine.","definition_xrefs":["PMID:24828577","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"cellular modified histidine biosynthetic process","termid":"GO:0052703"},{"relation_name":"is_a","term_name":"selenoneine metabolic process","termid":"GO:1903256"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenoneine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-selenoneine biosynthetic process","type":"narrow"},{"name":"selenoneine anabolism","type":"exact"},{"name":"selenoneine biosynthesis","type":"exact"},{"name":"selenoneine formation","type":"exact"},{"name":"selenoneine synthesis","type":"exact"}],"termid":"GO:1903257","terms_by_termid":{"GO:1903257":null}}


id: PBO:0003565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNA associated protein Dip2 (predicted)","termid":"PBO:0003565"}


id: FYPO:0001261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitotic cytokinesis is decreased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cytokinesis","termid":"FYPO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cytokinesis during cellular hyperosmotic response","synonyms":[{"name":"decreased cytokinesis during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"decreased cytokinesis during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"decreased mitotic cytokinesis during cellular hyperosmotic response","type":"exact"},{"name":"reduced cytokinesis during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001261"}


id: GO:0033289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule located such that it threads through the conoid and projects through the polar ring.","definition_xrefs":["PMID:16518471","GOC:mah","PMID:11901169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"apical complex","termid":"GO:0020007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"intraconoid microtubule","termid":"GO:0033289"}


id: PBO:0080989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 5","termid":"PBO:0080989"}


id: PBO:0058163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4457","termid":"PBO:0058163"}


id: MOD:01502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["OMSSA:175","Unimod:214#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ116Y","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01502"}


id: PR:Q09867
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efg1 gene.","definition_xrefs":["UniProtKB:Q09867","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein efg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.02","synonyms":[{"name":"Spom972h-efg1","type":"exact"}],"termid":"PR:Q09867"}


id: GO:0071965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotion in a multicellular organism, i.e. self-propelled movement of a multicellular organism from one location to another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"is_a","term_name":"multicellular organismal movement","termid":"GO:0050879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal locomotion","termid":"GO:0071965"}


id: PBO:0090542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4 kinase plasma membrane scaffold Efr3-like","termid":"PBO:0090542"}


id: PBO:0005674
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.7.3.3","termid":"PBO:0005674"}


id: PBO:0077085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 induced glycolysis regulatory phosphatase","termid":"PBO:0077085"}


id: PBO:0053937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1237","termid":"PBO:0053937"}


id: GO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase III following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription elongation factor activity (obsolete GO:0016945)","synonyms":[{"name":"Pol III transcription elongation factor activity","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"exact"}],"termid":"GO:0016945"}


id: GO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monoterpenyl diphosphate + H2O = monoterpenol + diphosphate.","definition_xrefs":["MetaCyc:MONOTERPENYL-PYROPHOSPHATASE-RXN","EC:3.1.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"monoterpenyl-diphosphatase activity","synonyms":[{"name":"bornyl diphosphate hydrolase activity","type":"related"},{"name":"bornyl pyrophosphate hydrolase activity","type":"related"},{"name":"monoterpenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"monoterpenyl-pyrophosphatase activity","type":"exact"}],"termid":"GO:0050108"}


id: GO:2000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000453"}


id: PBO:0045307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 alpha","termid":"PBO:0045307"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: GO:0098798
data:
  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id: PBO:0076375
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id: FYPO:0004308
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id: PBO:0068537
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id: GO:0035893
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id: PBO:0002440
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id: GO:0102321
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id: GO:1903067
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id: GO:0005903
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id: PBO:0078152
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id: PBO:0068812
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id: GO:2000584
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id: PBO:0061890
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id: PBO:0000309
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id: GO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H+ = (R)-1-aminopropan-2-yl phosphate + CO2.","definition_xrefs":["EC:4.1.1.81","RHEA:11492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"threonine-phosphate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R06530","MetaCyc:4.1.1.81-RXN"],"synonyms":[{"name":"CobD","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase [(R)-1-aminopropan-2-yl-phosphate-forming]","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase activity","type":"related"},{"name":"L-threonine-O-3-phosphate decarboxylase activity","type":"exact"}],"termid":"GO:0048472"}


id: PBO:0043457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 3","termid":"PBO:0043457"}


id: PBO:0049463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin A (MNS blood group)","termid":"PBO:0049463"}


id: GO:0015248
data:
  {"annotated_genes":["SJAG_00355","SJAG_03718","SJAG_02375","SJAG_01329","SJAG_01590","SJAG_01722","SJAG_02323"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111390,103549,104688,106591,76048,98057,89858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120015"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of sterols into, out of or within a cell, or between cells. Sterol are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transporter activity","termid":"GO:0005319"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sterol transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5679101","Reactome:R-HSA-8867667","Reactome:R-HSA-8868402","Reactome:R-HSA-5250531","RHEA:39747","Reactome:R-HSA-5679145","Reactome:R-HSA-265783"],"termid":"GO:0015248","terms_by_termid":{"GO:0120015":null}}


id: GO:0021737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the emboliform nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GOC:curators","GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"emboliform nucleus development","termid":"GO:0021737"}


id: PBO:0078188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-1","termid":"PBO:0078188"}


id: GO:0048694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an injured axon.","definition_xrefs":["GOC:dph","GOC:jid","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of injured axon","synonyms":[{"name":"activation of collateral sprouting of injured axon","type":"narrow"},{"name":"stimulation of collateral sprouting of injured axon","type":"narrow"},{"name":"up regulation of collateral sprouting of injured axon","type":"exact"},{"name":"up-regulation of collateral sprouting of injured axon","type":"exact"},{"name":"upregulation of collateral sprouting of injured axon","type":"exact"}],"termid":"GO:0048694"}


id: PBO:0031513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_molecular_function","termid":"PBO:0031513"}


id: PBO:0046377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 1","termid":"PBO:0046377"}


id: PBO:0003198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein Meu6","termid":"PBO:0003198"}


id: PBO:0088926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN complex subunit Gem7","termid":"PBO:0088926"}


id: GO:0043489
data:
  {"annotated_genes":["SJAG_04946","SJAG_03696","SJAG_02573","SJAG_03283","SJAG_04825","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85912,77428,95583,77723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[85219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[86338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090669"}]},"cv_name":"biological_process","definition":"Prevention of degradation of RNA molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04586":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"RNA stabilization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0043489","terms_by_termid":{"GO:0048255":null,"GO:0070935":null,"GO:0090669":null}}


id: PBO:0057705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1292","termid":"PBO:0057705"}


id: PBO:0027997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_multinucleate_aseptate_vegetative_cell","termid":"PBO:0027997"}


id: GO:0042619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.","definition_xrefs":["PMID:18640095","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-hydroxybutyrate metabolic process","termid":"GO:0042618"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) biosynthetic process","termid":"GO:1901441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly-hydroxybutyrate biosynthetic process","synonyms":[{"name":"PHB biosynthesis","type":"exact"},{"name":"PHB biosynthetic process","type":"exact"},{"name":"poly-hydroxybutyrate anabolism","type":"exact"},{"name":"poly-hydroxybutyrate biosynthesis","type":"exact"},{"name":"poly-hydroxybutyrate formation","type":"exact"},{"name":"poly-hydroxybutyrate synthesis","type":"exact"}],"termid":"GO:0042619"}


id: GO:0097650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An incomplete microtubule containing 10 protofilaments that fuses with a complete microtubule called A tubule (containing 13 protofilaments) to form an axonemal outer doublet.","definition_xrefs":["ISBN:0716731363","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal outer doublet","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"B axonemal microtubule","synonyms":[{"name":"B tubule","type":"broad"}],"termid":"GO:0097650"}


id: GO:0071654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-C motif) ligand 1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 1 production","termid":"GO:0071652"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 1 production","termid":"GO:0071610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CCL1 production","type":"exact"},{"name":"positive regulation of T cell activation 3 production","type":"exact"},{"name":"positive regulation of TCA-3 production","type":"exact"}],"termid":"GO:0071654"}


id: GO:0060762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in mammary gland duct morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in mammary gland duct morphogenesis","termid":"GO:0060762"}


id: GO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-8 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-8 production","termid":"GO:0032677"},{"relation_name":"positively_regulates","term_name":"interleukin-8 production","termid":"GO:0032637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-8 production","secondary_identifiers":["GO:0045416","GO:2000484"],"synonyms":[{"name":"activation of interleukin-8 production","type":"narrow"},{"name":"positive regulation of IL-8 production","type":"exact"},{"name":"positive regulation of interleukin-8 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-8 secretion","type":"narrow"},{"name":"stimulation of interleukin-8 production","type":"narrow"},{"name":"up regulation of interleukin-8 production","type":"exact"},{"name":"up-regulation of interleukin-8 production","type":"exact"},{"name":"upregulation of interleukin-8 production","type":"exact"}],"termid":"GO:0032757"}


id: PBO:0068147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 454","termid":"PBO:0068147"}


id: PBO:0013454
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses rad1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013454"}


id: SO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes for 2S ribosomal RNA, which functions as a component of the large subunit of the ribosome in Drosophila and at least some other Diptera.","definition_xrefs":["PMID:768488","PMID:4847940","PMID:10788608","PMID:407103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA_gene","termid":"SO:0002361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_2S_gene","synonyms":[{"name":"2S rRNA gene","type":"exact"},{"name":"rRNA 2S gene","type":"exact"}],"termid":"SO:0002336"}


id: GO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of a DNA-dependent RNA polymerase promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH","PMID:18846104","PMID:16826228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcriptional start site selection","secondary_identifiers":["GO:0001176"],"synonyms":[{"name":"DNA-dependent transcriptional start site selection","type":"exact"},{"name":"transcriptional start site selection at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001173"}


id: GO:0106341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2,3-tri-(9Z,12Z)-octadecadienoylglycerol + N-(30-hydroxytriacontanoyl)-sphing-4-enine = di-(9Z,12Z)-octadecadienoylglycerol + N-[30-(9Z,12Z-octadecadienoyloxy)-triacontanoyl]-sphing-4-enine.","definition_xrefs":["PMID:28248318","RHEA:55264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"omega-hydroxyceramide transacylase activity","termid":"GO:0106341"}


id: PR:Q09737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc202 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C13A11.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.06","synonyms":[{"name":"Spom972h-pdc202","type":"exact"}],"termid":"PR:Q09737"}


id: FYPO:0000819
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of P-factor, the mating pheromone produced by mating type plus cells, released into the growth medium is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of pheromone in growth medium","termid":"FYPO:0000817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of P-factor in growth medium","synonyms":[{"name":"increased accumulation of P-factor in growth medium","type":"related"},{"name":"increased level of P-factor in growth medium","type":"exact"},{"name":"increased release of P-factor into growth medium","type":"related"}],"termid":"FYPO:0000819"}


id: PBO:0072337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 23","termid":"PBO:0072337"}


id: GO:0160009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] = (2E)-2-butenoate + L-lysyl-[histone].","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"},{"relation_name":"is_a","term_name":"protein decrotonylase activity","termid":"GO:0160008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone decrotonylase activity","termid":"GO:0160009"}


id: PBO:0047528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 2","termid":"PBO:0047528"}


id: PBO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 12","termid":"PBO:0048091"}


id: GO:0033092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immature T cell proliferation in the thymus.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation in thymus","termid":"GO:0033084"},{"relation_name":"is_a","term_name":"positive regulation of immature T cell proliferation","termid":"GO:0033091"},{"relation_name":"positively_regulates","term_name":"immature T cell proliferation in thymus","termid":"GO:0033080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immature T cell proliferation in thymus","synonyms":[{"name":"positive regulation of thymic T cell proliferation","type":"exact"},{"name":"positive regulation of thymocyte cell proliferation","type":"exact"},{"name":"positive regulation of thymocyte proliferation","type":"exact"}],"termid":"GO:0033092"}


id: FYPO:0004815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of ribosomal DNA measured in a cell is greater than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased rDNA antisense small RNA level","synonyms":[{"name":"increased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"increased antisense small RNA at rDNA","type":"exact"},{"name":"increased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"increased rDNA antisense small RNA accumulation","type":"related"},{"name":"increased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"increased rDNA antisense small RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004815"}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["ChEBI:2311","PubMed:19833098","PubMed:11572972","RESID:AA0595","PubMed:10830969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: PBO:0049230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRM3 antisense RNA 1","termid":"PBO:0049230"}


id: PBO:0057685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273h","termid":"PBO:0057685"}


id: PBO:0108905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP6 pseudogene 2","termid":"PBO:0108905"}


id: GO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase V transcription repressor complex","termid":"GO:0090574"}


id: PATO:0000509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000509 stress sensitivity value (obsolete PATO:0000509)","termid":"PATO:0000509"}


id: PBO:0083195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene GIP3/YPL137C","termid":"PBO:0083195"}


id: SO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a translational start codon of CUG.","definition_xrefs":["SO:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_non_canonical_start_codon","termid":"SO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_start_codon_CUG","synonyms":[{"name":"gene with start codon CUG","type":"exact"}],"termid":"SO:0001740"}


id: PBO:0041939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 7","termid":"PBO:0041939"}


id: PR:O60187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom972h-sid4","type":"exact"}],"termid":"PR:O60187"}


id: PBO:0042826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 5A","termid":"PBO:0042826"}


id: GO:0036435
data:
  {"annotated_genes":["SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76317],"is_not":false,"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 48 in the target protein.","definition_xrefs":["PMID:20739285","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"K48-linked polyubiquitin modification-dependent protein binding","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5683077"],"termid":"GO:0036435","terms_by_termid":{"GO:0036435":null}}


id: GO:1903783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion import across the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:19376779","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:nc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sodium ion transmembrane transport","termid":"GO:1902306"},{"relation_name":"is_a","term_name":"regulation of sodium ion import across plasma membrane","termid":"GO:1903782"},{"relation_name":"negatively_regulates","term_name":"sodium ion import across plasma membrane","termid":"GO:0098719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium ion import across plasma membrane","synonyms":[{"name":"inhibition of sodium ion import across plasma membrane","type":"narrow"},{"name":"down regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"down-regulation of sodium ion import across plasma membrane","type":"exact"},{"name":"downregulation of sodium ion import across plasma membrane","type":"exact"}],"termid":"GO:1903783"}


id: GO:0070987
data:
  {"annotated_genes":["SJAG_04089","SJAG_00611","SJAG_03906","SJAG_04190","SJAG_04791","SJAG_00153"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70733,94825,98321,99418,99654,112439],"is_not":false,"summary":null,"term":"GO:0070987"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across the lesion. This process does not remove the replication-blocking lesions but does not causes an increase in the endogenous mutation level. For S. cerevisiae, RAD30 encodes DNA polymerase eta, which incorporates two adenines. When incorporated across a thymine-thymine dimer, it does not increase the endogenous mutation level.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translesion synthesis","termid":"GO:0019985"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"error-free translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070987","terms_by_termid":{"GO:0070987":null}}


id: MOD:00486
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:114#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized proline biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxProBiotinRed","type":"related"},{"name":"Oxidized proline biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00486"}


id: GO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"activation of meiosis","termid":"GO:0090427"}


id: GO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded compartment that is found at the base of the rhabdomere and contains stored calcium, InsP3 receptors and smooth endoplasmic reticulum Ca2+-ATPase.","definition_xrefs":["PMID:11707492","PMID:8646774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum subcompartment","termid":"GO:0098827"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum cisterna","termid":"GO:0120082"},{"relation_name":"part_of","term_name":"rhabdomere","termid":"GO:0016028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"subrhabdomeral cisterna","synonyms":[{"name":"SMC","type":"related"},{"name":"submicrovillar cisterna","type":"exact"}],"termid":"GO:0016029"}


id: SO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL1 RNA leader sequence to the 5' end of most mRNAs.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL1_acceptor_site","synonyms":[{"name":"SL1 acceptor site","type":"exact"}],"termid":"SO:0000708"}


id: PBO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 16","termid":"PBO:0070884"}


id: GO:0045740
data:
  {"annotated_genes":["SJAG_03438","SJAG_02074","SJAG_00364","SJAG_03160","SJAG_03048","SJAG_03695","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107292,112394,98750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[97832,111399,101998,84807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[97836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"positively_regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication","type":"narrow"},{"name":"stimulation of DNA replication","type":"narrow"},{"name":"up regulation of DNA replication","type":"exact"},{"name":"up-regulation of DNA replication","type":"exact"},{"name":"upregulation of DNA replication","type":"exact"}],"termid":"GO:0045740","terms_by_termid":{"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0077201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF18 antisense RNA 1","termid":"PBO:0077201"}


id: SO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Imprinted genes are epigenetically modified genes that are expressed monoallelically according to their parent of origin.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"},{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_imprinted","secondary_identifiers":["http:http\\://en.wikipedia.org/wiki/Genomic_imprinting"],"synonyms":[{"name":"genomically imprinted","type":"exact"},{"name":"imprinted","type":"broad"}],"termid":"SO:0000134"}


id: PBO:0071697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 3","termid":"PBO:0071697"}


id: GO:0046479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"},{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycosphingolipid catabolic process","synonyms":[{"name":"glycosphingolipid breakdown","type":"exact"},{"name":"glycosphingolipid catabolism","type":"exact"},{"name":"glycosphingolipid degradation","type":"exact"}],"termid":"GO:0046479"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: GO:0070719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the platelet-derived growth factor alpha receptor (alphaPDGFR; PDGFRA), phospholipase C-gamma-1 (PLC-gamma-1), phosphatidylinositol 3-kinase (PI3K) and the adaptor protein SHP-2, and is involved signaling via the PDGFR signaling pathway.","definition_xrefs":["GOC:mah","PMID:8943348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphaPDGFR-PLC-gamma-1-PI3K-SHP-2 complex","synonyms":[{"name":"PDGFRA-PLC-gamma-1-PI3K-SHP-2 complex, PDGF stimulated","type":"narrow"}],"termid":"GO:0070719"}


id: GO:0071757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a hexamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:20176268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"hexameric IgM immunoglobulin complex","synonyms":[{"name":"hexameric IgM antibody","type":"exact"}],"termid":"GO:0071757"}


id: GO:0061965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["PMID:27689881","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of entry into reproductive diapause","termid":"GO:0061963"},{"relation_name":"positively_regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of entry into reproductive diapause","termid":"GO:0061965"}


id: GO:0045338
data:
  {"annotated_genes":["SJAG_03352","SJAG_01474","SJAG_03715","SJAG_04568","SJAG_00580","SJAG_02719","SJAG_04307","SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75363],"is_not":false,"summary":null,"term":"GO:0045338"},{"annotations":[77452,97346,70861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045337"},{"annotations":[78716,73925,108969,110097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving farnesyl diphosphate, an intermediate in carotenoid, sesquiterpene, squalene and sterol biosynthesis, as well as a substrate in protein farnesylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"farnesyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"farnesyl diphosphate metabolism","type":"exact"}],"termid":"GO:0045338","terms_by_termid":{"GO:0010142":null,"GO:0045337":null,"GO:0045338":null}}


id: GO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by carotid body-vasomotor excitation and results in a decrease in the diameter of an artery during the chemoreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction of artery involved in chemoreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0002012"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in carotid body chemoreceptor response to lowering of systemic arterial blood pressure","synonyms":[{"name":"vasoconstriction of artery during carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"related"}],"termid":"GO:0003042"}


id: PBO:0006191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_exists_during","termid":"PBO:0006191"}


id: GO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The canonical Wnt signaling pathway that contributes to an expansion of the population of cardiac muscle cells.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of cardiac muscle cell proliferation (obsolete GO:0061315)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of cardiac muscle cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of cardiac muscle cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of cardiac muscle cell proliferation","type":"exact"}],"termid":"GO:0061315"}


id: PR:Q9P3U2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC328.04 gene.","definition_xrefs":["UniProtKB:Q9P3U2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C328.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.04","synonyms":[{"name":"Spom972h-SPAC328.04","type":"exact"}],"termid":"PR:Q9P3U2"}


id: PBO:0073024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCP2D1 antisense RNA 1","termid":"PBO:0073024"}


id: GO:0016153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-imidazolone-5-propanoate + H+ = trans-urocanate + H2O.","definition_xrefs":["EC:4.2.1.49","RHEA:13101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"urocanate hydratase activity","secondary_identifiers":["MetaCyc:UROCANATE-HYDRATASE-RXN","Reactome:R-HSA-70903","KEGG_REACTION:R02914"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase (urocanate-forming)","type":"related"},{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate hydro-lyase activity","type":"related"},{"name":"imidazolonepropionate hydrolase activity","type":"related"},{"name":"urocanase activity","type":"related"}],"termid":"GO:0016153"}


id: PBO:0000554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamic acid","termid":"PBO:0000554"}


id: PBO:0038828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 1","termid":"PBO:0038828"}


id: PBO:0052099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 2","termid":"PBO:0052099"}


id: GO:2000246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Ftsz-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokinesis","termid":"GO:0032467"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"is_a","term_name":"regulation of FtsZ-dependent cytokinesis","termid":"GO:2000244"},{"relation_name":"positively_regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"positive regulation of prokaryote-type cytokinesis","type":"related"},{"name":"positive regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000246"}


id: PBO:0017032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 otholog","termid":"PBO:0017032"}


id: PBO:0054976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2390","termid":"PBO:0054976"}


id: GO:0102809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-beta-D-glucoside = H+ + delphinidin 3-O-sophoroside + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside 2''-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8178"],"termid":"GO:0102809"}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: PBO:0044709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10","termid":"PBO:0044709"}


id: GO:0062206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-hydroxycopalyl diphosphate = (13R)-manoyl oxide + diphosphate.","definition_xrefs":["RHEA:54516","PMID:24990389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"manoyl oxide synthase activity","secondary_identifiers":["EC:4.2.3.190"],"termid":"GO:0062206"}


id: SO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylcytidine","secondary_identifiers":["RNAMOD:021"],"synonyms":[{"name":"5-methylcytidine","type":"exact"},{"name":"five methylcytidine","type":"exact"},{"name":"m5C","type":"exact"}],"termid":"SO:0001282"}


id: MOD:00765
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(L-cysteinyl)-L-cysteine, forming a disulfide bond with free cysteine.","definition_xrefs":["PubMed:2076469","PubMed:3083866","PubMed:7918467","PubMed:1988019","PubMed:2001356","PubMed:366603","PubMed:8344916","RESID:AA0025#CYS1","Unimod:312","DeltaMass:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinylation (disulfide with free L-cysteine)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cysteinylation","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"MOD_RES S-cysteinyl cysteine","type":"exact"},{"name":"S-cystenyl cystenyl","type":"exact"},{"name":"SCysCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00765"}


id: PBO:0049095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 152","termid":"PBO:0049095"}


id: GO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone is directed to a specific target site along the dorsal-ventral body axis in response to a combination of attractive and repulsive cues. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.","definition_xrefs":["GOC:tb","GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral axon guidance","synonyms":[{"name":"dorsal-ventral axon guidance","type":"exact"},{"name":"dorsal/ventral axon pathfinding","type":"exact"},{"name":"dorsoventral axon guidance","type":"exact"}],"termid":"GO:0033563"}


id: GO:0008052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between a sensory organ and the surrounding tissue are established and maintained.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of animal organ boundary","termid":"GO:0010160"},{"relation_name":"part_of","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ boundary specification","synonyms":[{"name":"sense organ boundary specification","type":"exact"}],"termid":"GO:0008052"}


id: GO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reverse transcription of an RNA molecule followed by recombination between the resultant cDNA and its homologous chromosomal allele.","definition_xrefs":["GOC:jl","PMID:8380627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"RNA-mediated DNA recombination","termid":"GO:0042152"}


id: PBO:0059793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 19","termid":"PBO:0059793"}


id: PBO:0042254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil serine rich protein 2","termid":"PBO:0042254"}


id: PBO:0026921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K5_acetylation","termid":"PBO:0026921"}


id: FYPO:0000281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuoles present in increased numbers during vegetative growth","termid":"FYPO:0000952"},{"relation_name":"is_a","term_name":"vacuoles present in increased numbers during vegetative growth","termid":"FYPO:0000952"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during vegetative growth","synonyms":[{"name":"fragmented vacuoles during vegetative growth","type":"related"},{"name":"small vacuoles present in greater numbers during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during mitotic cell cycle","type":"related"},{"name":"vacuole fusion defects","type":"related"},{"name":"vacuole organization defects, fragmented vacuoles during vegetative growth","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during vegetative growth","type":"exact"}],"termid":"FYPO:0000281"}


id: PBO:0085228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of evolutionarily-conserved CCR4-NOT regulatory complex; contains single ABC-type ATPase domain but no transmembrane domain; interacts with several subunits of Mediator","termid":"PBO:0085228"}


id: GO:0019544
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77263],"is_not":false,"summary":null,"term":"GO:0019544"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including glutamate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process to glutamate","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:ARGASEDEG-PWY","MetaCyc:ARG-GLU-PWY"],"synonyms":[{"name":"arginine breakdown to glutamate","type":"exact"},{"name":"arginine degradation to glutamate","type":"exact"}],"termid":"GO:0019544","terms_by_termid":{"GO:0019544":null}}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: GO:0072017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the distal tubule over time, from its formation to the mature structure. In mammals, the distal tubule is a nephron tubule that begins at the macula densa and extends to the connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tubule development","termid":"GO:0072017"}


id: GO:0019442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0044281","GO:0008150","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"tryptophan catabolic process to acetyl-CoA","secondary_identifiers":["MetaCyc:TRYPTOPHAN-DEGRADATION-1"],"synonyms":[{"name":"tryptophan breakdown to acetyl-CoA","type":"exact"},{"name":"tryptophan degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019442"}


id: GO:0043483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pigment anthocyanin, contributing to anthocyanin accumulation in a tissue in response to a UV light stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"},{"relation_name":"is_a","term_name":"pigment biosynthetic process involved in pigment accumulation","termid":"GO:0043477"},{"relation_name":"part_of","term_name":"anthocyanin accumulation in tissues in response to UV light","termid":"GO:0043481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin biosynthetic process involved in anthocyanin accumulation in response to UV light","synonyms":[{"name":"anthocyanin biosynthesis during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in response to UV light","type":"related"},{"name":"anthocyanin biosynthetic process during anthocyanin accumulation in tissues in response to UV light stimulus","type":"related"}],"termid":"GO:0043483"}


id: PBO:0067057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 78, pseudogene","termid":"PBO:0067057"}


id: FYPO:0005627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by any mitotic DNA damage checkpoint is greater than in wild type during a cellular response to ultraviolet (UV) light, when cells are exposed to UV during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0003445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of mitotic DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"delayed DNA damage checkpoint deactivation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint after UV irradiation during S phase","type":"exact"},{"name":"increased duration of mitotic DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"prolonged DNA damage checkpoint during cellular response to UV during mitotic S phase","type":"exact"}],"termid":"FYPO:0005627"}


id: GO:1990900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A constriction site at the junction of the plasma, flagellar and flagellar pocket membranes where the flagellum emerges from the cell body. Observed in some unicellular eukaryotic species such as Chlamydomonas, Giardia and Trypanosoma.","definition_xrefs":["PMID:18462016","PMID:19806154","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pocket collar","synonyms":[{"name":"FPC","type":"related"},{"name":"cilium pocket collar","type":"exact"},{"name":"flagellar collar","type":"related"},{"name":"flagellar pocket collar","type":"exact"},{"name":"flagellar pore","type":"related"},{"name":"flagellum pocket collar","type":"exact"}],"termid":"GO:1990900"}


id: PR:P40923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yox1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF complex negative regulatory component yox1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.13c","synonyms":[{"name":"Spom972h-yox1","type":"exact"}],"termid":"PR:P40923"}


id: FYPO:0005771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal in regions where nucleosomes are depleted. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at nucleosome-depleted regions during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005771"}


id: GO:0033970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-ureidopropanoate + H2O = H+ + malonate + urea.","definition_xrefs":["RHEA:17361","EC:3.5.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N-malonylurea hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07629","MetaCyc:3.5.1.95-RXN"],"synonyms":[{"name":"3-oxo-3-ureidopropanoate amidohydrolase (urea- and malonate-forming) activity","type":"related"},{"name":"ureidomalonase activity","type":"related"}],"termid":"GO:0033970"}


id: PBO:0027415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027415"}


id: PBO:0085331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein (PITP); controlled by the multiple drug resistance regulator Pdr1p; localizes to lipid particles and microsomes; controls levels of various lipids, may regulate lipid synthesis; homologous to Pdr17p; protein abundance increases in response to DNA replication stress","termid":"PBO:0085331"}


id: FYPO:0006650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an ATP-dependent protein-DNA complex displacement activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ATP-dependent protein-DNA complex displacement activity","termid":"FYPO:0006650"}


id: GO:0004305
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73111],"is_not":false,"summary":null,"term":"GO:0004305"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + ethanolamine = ADP + 2 H+ + phosphoethanolamine.","definition_xrefs":["EC:2.7.1.82","RHEA:13069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"ethanolamine kinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R01468","MetaCyc:ETHANOLAMINE-KINASE-RXN","Reactome:R-HSA-1483222"],"synonyms":[{"name":"ATP:ethanolamine O-phosphotransferase activity","type":"related"},{"name":"ethanolamine kinase (phosphorylating)","type":"related"},{"name":"ethanolamine phosphokinase activity","type":"related"}],"termid":"GO:0004305","terms_by_termid":{"GO:0004305":null}}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: FYPO:0003537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of premeiotic DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased rate of premeiotic DNA replication","synonyms":[{"name":"reduced rate of premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0003537"}


id: FYPO:0006691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear envelope partitioning and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe with abnormal nuclear envelope partitioning (obsolete FYPO:0006691)","synonyms":[{"name":"cut-like","type":"related"},{"name":"mitotic catastrophe with abnormal nuclear envelope partitioning during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe with abnormal nuclear envelope partitioning during vegetative growth","type":"exact"}],"termid":"FYPO:0006691"}


id: GO:1990308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-I dockerin domain of a protein. Type-I dockerin domain is the binding partner of type-1 cohesin domain.","definition_xrefs":["PMID:23195689","PMID:24080387","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type-I dockerin domain binding","termid":"GO:1990308"}


id: PBO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane insertion protein Get4 (predicted)","termid":"PBO:0005203"}


id: PBO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation","termid":"PBO:0031309"}


id: GO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex determination process that results in the initial specification of sexual status of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination","termid":"GO:0007538"}


id: PBO:0040761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1 pseudogene 2","termid":"PBO:0040761"}


id: SO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a tmRNA (SO:0000584).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_primary_transcript","synonyms":[{"name":"10Sa RNA primary transcript","type":"related"},{"name":"ssrA RNA primary transcript","type":"related"},{"name":"tmRNA primary transcript","type":"exact"}],"termid":"SO:0000586"}


id: GO:0140585
data:
  {"annotated_genes":["SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107140],"is_not":false,"summary":null,"term":"GO:0140585"}]},"cv_name":"molecular_function","definition":"Bridging together two cis-regulatory elements, colloquially referred to as promoters and/or enhancers, holding two loop anchors together to maintain a chromatin loop.","definition_xrefs":["PMID:32213323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin loop anchoring activity","termid":"GO:0140587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"promoter-enhancer loop anchoring activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"enhancer-promoter loop anchoring activity","type":"exact"}],"termid":"GO:0140585","terms_by_termid":{"GO:0140585":null}}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: GO:0070090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The intracellular plane, located halfway between the poles of the spindle, where chromosomes align during metaphase of mitotic or meiotic nuclear division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"metaphase plate","termid":"GO:0070090"}


id: PBO:0079868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk like zinc finger","termid":"PBO:0079868"}


id: PBO:0086485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative nucleotide sugar transporter; has similarity to Vrg4p","termid":"PBO:0086485"}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: FYPO:0002025
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, contains a septum with abnormal morphology (i.e. size, shape, or structure), and contain more than one nucleus.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000032","FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"inviable elongated multinucleate vegetative cell with abnormal septum morphology","synonyms":[{"name":"elongated multinucleate inviable vegetative cell with abnormal septum morphology","type":"exact"},{"name":"inviable elongated multinucleate cell with abnormal septum morphology during vegetative growth","type":"exact"},{"name":"inviable elongated multinucleate vegetative cell with abnormal septum morphology during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multinucleate vegetative cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0002025"}


id: PBO:0053610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 644","termid":"PBO:0053610"}


id: FYPO:0006862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah","PMID:29424342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"mislocalized RNA during vegetative growth","termid":"FYPO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"RNA mislocalized to cytoplasm during vegetative growth","synonyms":[{"name":"RNA mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"RNA mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"ectopic RNA localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006862"}


id: PBO:0077258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein family member 8","termid":"PBO:0077258"}


id: PBO:0047851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p22)","termid":"PBO:0047851"}


id: PBO:0045426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 6","termid":"PBO:0045426"}


id: PBO:0049643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 46","termid":"PBO:0049643"}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: PBO:0051406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IgLON family member 5","termid":"PBO:0051406"}


id: PBO:0061137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME2 pseudogene 1","termid":"PBO:0061137"}


id: PBO:0056808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD4A antisense RNA 1","termid":"PBO:0056808"}


id: GO:0003285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the septum secundum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septum secundum development","termid":"GO:0003285"}


id: PBO:0005173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease XPF","termid":"PBO:0005173"}


id: PBO:0005171
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.6.2.2","termid":"PBO:0005171"}


id: GO:0000722
data:
  {"annotated_genes":["SJAG_05173","SJAG_05353","SJAG_00640","SJAG_06642","SJAG_06597","SJAG_01677","SJAG_02079","SJAG_05105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84918,91755,106990,108173,108174,108175,108176,108177],"is_not":false,"summary":null,"term":"GO:0000722"}]},"cv_name":"biological_process","definition":"Any recombinational process that contributes to the maintenance of proper telomeric length.","definition_xrefs":["PMID:11850777","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"telomerase-independent telomere maintenance","type":"related"}],"termid":"GO:0000722","terms_by_termid":{"GO:0000722":null}}


id: PBO:0052739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 31","termid":"PBO:0052739"}


id: PBO:0042854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 68","termid":"PBO:0042854"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_02571","SJAG_04561","SJAG_00914","SJAG_02035","SJAG_02416","SJAG_03366","SJAG_04257","SJAG_03128","SJAG_02314","SJAG_02906","SJAG_02198","SJAG_00942","SJAG_02439","SJAG_00925","SJAG_02698","SJAG_04670","SJAG_00913","SJAG_03905","SJAG_04038","SJAG_03867","SJAG_01005","SJAG_04547","SJAG_00259","SJAG_04758","SJAG_04272","SJAG_00170","SJAG_04692","SJAG_02798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84581,85794,90902,98349,104978,106444],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[83768,93780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[92019,98992,90221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[108318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[93690,106536,108829,103453,112045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[88018,90664,104109,91035,104115,103095,108043,109751,110271,90424,113054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140597","GO:0140104","GO:0003674"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: PBO:0061536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 pseudogene 1","termid":"PBO:0061536"}


id: FYPO:0003928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the repair of double-strand breaks in DNA that are continually made (for example, by constitutive expression of a nuclease) results in repair junctions that differ from wild type.","definition_xrefs":["PomBase:mah","PMID:22093869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"altered double-strand break repair junction in presence of persistent double-strand breaks","synonyms":[{"name":"abnormal double-strand break repair resulting in formation of altered repair junction","type":"exact"},{"name":"altered pattern of repair junctions in HO survivors","type":"narrow"}],"termid":"FYPO:0003928"}


id: PBO:0038443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenesis associated Mth938 domain containing","termid":"PBO:0038443"}


id: PBO:0056866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 2","termid":"PBO:0056866"}


id: GO:0141043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids recognition by host's innate immune response by altering a conserved molecule recognized by the host's cell surface and intracellular innate immune receptors, including Toll-like receptors, and NOD-like receptors. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15014080","PMID:26502908","PMID:22131330","PMID:29101229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of host innate immune recognition","termid":"GO:0141043"}


id: PBO:0042862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 92 (putative)","termid":"PBO:0042862"}


id: GO:0035021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rac protein signal transduction","synonyms":[{"name":"down regulation of Rac protein signal transduction","type":"exact"},{"name":"down-regulation of Rac protein signal transduction","type":"exact"},{"name":"downregulation of Rac protein signal transduction","type":"exact"},{"name":"inhibition of Rac protein signal transduction","type":"narrow"}],"termid":"GO:0035021"}


id: PBO:0089117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated lipid droplet biogenesis protein, seipin Sei1","termid":"PBO:0089117"}


id: GO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold (obsolete GO:0061411)","termid":"GO:0061411"}


id: GO:0031057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent alteration of a histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone modification (obsolete GO:0031057)","synonyms":[{"name":"down regulation of histone modification","type":"exact"},{"name":"down-regulation of histone modification","type":"exact"},{"name":"downregulation of histone modification","type":"exact"},{"name":"inhibition of histone modification","type":"narrow"}],"termid":"GO:0031057"}


id: PBO:0005060
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maple syrup urine disease type II","termid":"PBO:0005060"}


id: CHEBI:29699
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tunicamycin","termid":"CHEBI:29699"}


id: PR:Q9P6J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trehalose-6-phosphate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02339","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase Mal1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.07","secondary_identifiers":["UniProtKB:Q9P6J3"],"synonyms":[{"name":"SPBC1683.07","type":"related"},{"name":"Spom972h-treC","type":"exact"},{"name":"maltase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q9P6J3"}


id: GO:1902124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-pinoresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol metabolic process","synonyms":[{"name":"(+)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1902124"}


id: GO:1903221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences.","definition_xrefs":["GO_REF:0000058","PMID:23093942","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"prevention of genomic instability induced by DNA replication fork arrest","type":"related"},{"name":"regulation of mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork restart","type":"related"},{"name":"regulation of mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1903221"}


id: PBO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc25","termid":"PBO:0004117"}


id: PBO:0042452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 5","termid":"PBO:0042452"}


id: GO:0043586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.","definition_xrefs":["GOC:jl","UBERON:0001723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tongue development","synonyms":[{"name":"glossa development","type":"narrow"},{"name":"lingua development","type":"narrow"}],"termid":"GO:0043586"}


id: GO:0007547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The events determining the germ-line sexual phenotype after the initial transmission of that phenotype to germ-line-specific information pathways.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processes downstream of sex determination signal","termid":"GO:0007545"},{"relation_name":"part_of","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line processes downstream of sex determination signal","termid":"GO:0007547"}


id: GO:0008978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Gly-Phe bond to release an N-terminal, basic peptide of 5-8 residues from type IV prepilin, and then N-methylates the new N-terminal amino group, the methyl donor being S-adenosyl-L-methionine.","definition_xrefs":["EC:3.4.23.43"],"gene_count":0,"genotype_count":0,"name":"obsolete prepilin peptidase activity (obsolete GO:0008978)","synonyms":[{"name":"prepilin peptidase activity","type":"exact"}],"termid":"GO:0008978"}


id: PBO:0046458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 15 like 1","termid":"PBO:0046458"}


id: GO:0008926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannitol-1-phosphate 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:MANNPDEHYDROG-RXN","RHEA:19661"],"termid":"GO:0008926"}


id: GO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"positively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"narrow"},{"name":"stimulation of eye pigmentation","type":"narrow"},{"name":"up regulation of eye pigmentation","type":"exact"},{"name":"up-regulation of eye pigmentation","type":"exact"},{"name":"upregulation of eye pigmentation","type":"exact"}],"termid":"GO:0048075"}


id: PBO:0027955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxamine-phosphate_oxidase_activity","termid":"PBO:0027955"}


id: PBO:0063635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 2","termid":"PBO:0063635"}


id: FYPO:0002236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular sterol ester level","synonyms":[{"name":"normal cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"normal cellular sterol ester level during vegetative growth","type":"exact"},{"name":"normal level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002236"}


id: PBO:0078440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 6-1","termid":"PBO:0078440"}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: GO:0035299
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74352],"is_not":false,"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ATP = 1D-myo-inositol hexakisphosphate + ADP + 2 H+.","definition_xrefs":["RHEA:20313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol pentakisphosphate 2-kinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R05202","Reactome:R-HSA-1855176","Reactome:R-HSA-1855179","MetaCyc:RXN-7163","EC:2.7.1.158"],"synonyms":[{"name":"Gsl1p","type":"related"},{"name":"IP5 2-kinase activity","type":"related"},{"name":"Ins(1,3,4,5,6)P5 2-kinase activity","type":"related"},{"name":"Ipk1p","type":"related"},{"name":"inositol 1,3,4,5,6-pentakisphosphate 2-kinase activity","type":"related"},{"name":"inositol hexakisphosphate synthase","type":"related"},{"name":"inositol polyphosphate kinase activity","type":"related"},{"name":"inositol-pentakisphosphate 2-kinase activity","type":"related"}],"termid":"GO:0035299","terms_by_termid":{"GO:0035299":null}}


id: GO:0000810
data:
  {"annotated_genes":["SJAG_02356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105683],"is_not":false,"summary":null,"term":"GO:0000810"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol 3-diphosphate + H2O = a 1,2-diacyl-sn-glycerol 3-phosphate + phosphate.","definition_xrefs":["PMID:8567632","RHEA:27449","GOC:kad","PMID:9452443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol diphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-11277","EC:3.6.1.75"],"synonyms":[{"name":"DGPP phosphatase activity","type":"exact"},{"name":"DGPP phosphohydrolase activity","type":"exact"},{"name":"diacylglycerol pyrophosphate phosphatase activity","type":"exact"}],"termid":"GO:0000810","terms_by_termid":{"GO:0000810":null}}


id: GO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell proliferation","synonyms":[{"name":"regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046646"}


id: PBO:0028592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028592"}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: PBO:0040068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP21 antisense RNA 1","termid":"PBO:0040068"}


id: PBO:0049567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 3","termid":"PBO:0049567"}


id: GO:0021697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar cortex formation","termid":"GO:0021697"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: GO:0140253
data:
  {"annotated_genes":["SJAG_02989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94507],"is_not":false,"summary":null,"term":"GO:0140253"}]},"cv_name":"biological_process","definition":"A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium.","definition_xrefs":["Wikipedia:Cell_fusion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cell fusion","type":"exact"},{"name":"cell fusion","type":"broad"}],"termid":"GO:0140253","terms_by_termid":{"GO:0140253":null}}


id: PBO:0078237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 19","termid":"PBO:0078237"}


id: PBO:0089435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1-like","termid":"PBO:0089435"}


id: GO:0010483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Interaction between the pollen tube, part of the male gametophyte, and the ovule, part of the female gametophyte, that results in the arrest of pollen tube growth, rupture of the pollen tube and the release of the sperm cells.","definition_xrefs":["PMID:17673660","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube reception","termid":"GO:0010483"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: PBO:0036385
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Bulleromyces albus DPS1","termid":"PBO:0036385"}


id: GO:1905744
data:
  {"annotated_genes":["SJAG_01511","SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94104],"is_not":false,"summary":null,"term":"GO:1905744"},{"annotations":[113485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["PMID:2880558","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01040":null,"SJAG_01511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"regulation of nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"regulation of splicing","type":"broad"}],"termid":"GO:1905744","terms_by_termid":{"GO:1905744":null,"GO:1905746":null}}


id: PBO:0082065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-ketosphinganine reductase; catalyzes the second step in phytosphingosine synthesis; essential for growth in the absence of exogenous dihydrosphingosine or phytosphingosine; localized to lipid droplets; member of short chain dehydrogenase/reductase protein family; mutations in human homolog KDSR cause recessive progressive symmetric erythrokeratoderma","termid":"PBO:0082065"}


id: GO:0018362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase via dihydroxyheme-L-aspartyl ester-L-glutamyl ester.","definition_xrefs":["RESID:AA0279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase-heme linkage","termid":"GO:0018186"},{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"peroxidase-heme linkage via dihydroxyheme-L-aspartyl ester-L-glutamyl ester","secondary_identifiers":["GO:0019924"],"synonyms":[{"name":"peroxidase-haem linkage via dihydroxyhaem-L-aspartyl ester-L-glutamyl ester","type":"exact"}],"termid":"GO:0018362"}


id: PBO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 8-1","termid":"PBO:0061178"}


id: GO:0034506
data:
  {"annotated_genes":["SJAG_03220","SJAG_00646","SJAG_01050","SJAG_00207","SJAG_03126","SJAG_00170","SJAG_00768","SJAG_01332","SJAG_00307","SJAG_03567","SJAG_03183","SJAG_03832","SJAG_02778","SJAG_03491","SJAG_04038","SJAG_01745","SJAG_03449","SJAG_01082","SJAG_00684"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70934,83778,84815,85409,101574,105596,106935,108601,109695,111623],"is_not":false,"summary":null,"term":"GO:0034506"},{"annotations":[104972,85778,101677,87713,111673,86993,112270,107203],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061638"},{"annotations":[97517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"The innermost portion of the centromeric region of a chromosome, encompassing the core region of a chromosome centromere and the proteins that bind to it.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00207":null,"SJAG_00307":null,"SJAG_00646":null,"SJAG_00684":null,"SJAG_00768":null,"SJAG_01050":null,"SJAG_01082":null,"SJAG_01332":null,"SJAG_01745":null,"SJAG_02778":null,"SJAG_03126":null,"SJAG_03183":null,"SJAG_03220":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03567":null,"SJAG_03832":null,"SJAG_04038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"chromosome, centromeric core domain","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"chromosome, centric core region","type":"related"},{"name":"chromosome, centromeric core region","type":"exact"}],"termid":"GO:0034506","terms_by_termid":{"GO:0034506":null,"GO:0043505":null,"GO:0061638":null}}


id: PATO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having four angles and four sides.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadrangular","termid":"PATO:0001988"}


id: GO:2000821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of grooming behavior.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"grooming behavior","termid":"GO:0007625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of grooming behavior","synonyms":[{"name":"regulation of grooming behaviour","type":"exact"}],"termid":"GO:2000821"}


id: GO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amine stimulus","termid":"GO:0071418"}


id: PBO:0057489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 607","termid":"PBO:0057489"}


id: PBO:0086487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ortholog of mammalian ETF-alpha; interacts with frataxin, Yfh1p; null mutant displays elevated frequency of mitochondrial genome loss; may have a role in oxidative stress response; ETF-alpha is an electron transfer flavoprotein complex subunit","termid":"PBO:0086487"}


id: GO:0012509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances within the Golgi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"COPI-coated vesicle membrane","termid":"GO:0030663"},{"relation_name":"part_of","term_name":"COPI-coated inter-Golgi transport vesicle","termid":"GO:0030143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"inter-Golgi transport vesicle membrane","synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012509"}


id: SO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the process of splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_variant","secondary_identifiers":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"synonyms":[{"name":"Jannovar:splicing_variant","type":"exact"},{"name":"splicing variant","type":"exact"}],"termid":"SO:0001568"}


id: GO:0006009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into glucose 1-phosphate to produce glucose bisphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"glucose 1-phosphate metabolic process","termid":"GO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate phosphorylation","termid":"GO:0006009"}


id: GO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hair follicle cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:rph","PMID:16086254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hair follicle cell proliferation","termid":"GO:0071335"}


id: RO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","synonyms":[{"name":"affects","type":"related"}],"termid":"RO:0002418"}


id: PBO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 1","termid":"PBO:0070431"}


id: GO:0033094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: putrescine + 2-oxoglutarate = L-glutamate + 1-pyrroline + H2O. The enzymatic part of the reaction produces 4-aminobutanal that spontaneously cyclizes to form 1-pyrroline.","definition_xrefs":["RHEA:12268","GOC:mlg","EC:2.6.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"putrescine--2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:PUTTRANSAM-RXN"],"synonyms":[{"name":"PAT activity","type":"related"},{"name":"YgjG","type":"related"},{"name":"butane-1,4-diamine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine aminotransferase activity","type":"broad"},{"name":"putrescine transaminase activity","type":"broad"},{"name":"putrescine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"putrescine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine:alpha-ketoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033094"}


id: GO:0043401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by a steroid hormone binding to a receptor.","definition_xrefs":["PMID:12606724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"steroid hormone mediated signaling pathway","synonyms":[{"name":"steroid hormone mediated signalling","type":"exact"}],"termid":"GO:0043401"}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: GO:0032456
data:
  {"annotated_genes":["SJAG_03756","SJAG_04565","SJAG_01809","SJAG_01945","SJAG_02811","SJAG_04509","SJAG_03250","SJAG_02912","SJAG_02177","SJAG_04609","SJAG_04846","SJAG_00379","SJAG_00669","SJAG_02753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72740,74349,78242,78357,110800,110879],"is_not":false,"summary":null,"term":"GO:0032456"},{"annotations":[96619,87924,113565,108016,108236,113936,102727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[83687],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"The directed movement of membrane-bounded vesicles from endosomes back to the plasma membrane, a trafficking pathway that promotes the recycling of internalized transmembrane proteins.","definition_xrefs":["PMID:16473635","PMID:23563491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_00669":null,"SJAG_01809":null,"SJAG_01945":null,"SJAG_02177":null,"SJAG_02753":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04509":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:1990126"],"synonyms":[{"name":"retrograde transport of endocytic vesicles","type":"related"},{"name":"retrograde transport, endosome to plasma membrane","type":"exact"}],"termid":"GO:0032456","terms_by_termid":{"GO:0032456":null,"GO:0099638":null,"GO:2001135":null}}


id: PBO:0078909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 18-1","termid":"PBO:0078909"}


id: GO:0003954
data:
  {"annotated_genes":["SJAG_04152","SJAG_01539","SJAG_00235"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113837],"is_not":false,"summary":null,"term":"GO:0003954"},{"annotations":[92290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[108091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.","definition_xrefs":["RHEA:11356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_01539":null,"SJAG_04152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADH dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DPNH diaphorase activity","type":"related"},{"name":"NADH diaphorase activity","type":"related"},{"name":"NADH hydrogenase activity","type":"related"},{"name":"NADH oxidoreductase activity","type":"related"},{"name":"NADH-menadione oxidoreductase activity","type":"narrow"},{"name":"NADH2 dehydrogenase activity","type":"related"},{"name":"NADH:(acceptor) oxidoreductase activity","type":"related"},{"name":"NADH:acceptor oxidoreductase activity","type":"related"},{"name":"NADH:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"beta-NADH dehydrogenase dinucleotide activity","type":"related"},{"name":"cytochrome c reductase activity","type":"related"},{"name":"diaphorase activity","type":"broad"},{"name":"dihydrocodehydrogenase I dehydrogenase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide dehydrogenase activity","type":"related"},{"name":"diphosphopyridine diaphorase activity","type":"related"},{"name":"diphosphopyrinase activity","type":"related"},{"name":"reduced diphosphopyridine nucleotide diaphorase activity","type":"related"},{"name":"type 1 dehydrogenase activity","type":"related"},{"name":"type I dehydrogenase activity","type":"related"}],"termid":"GO:0003954","terms_by_termid":{"GO:0003954":null,"GO:0008137":null,"GO:0050136":null}}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["PMID:11909533","RHEA:70287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855169","MetaCyc:RXN-10984"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: PBO:0039867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene","termid":"PBO:0039867"}


id: GO:1900068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alkalinity.","definition_xrefs":["GOC:TermGenie","PMID:17023428","GOC:dgf","PMID:12509465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to alkaline pH","termid":"GO:1900067"},{"relation_name":"negatively_regulates","term_name":"cellular response to alkaline pH","termid":"GO:0071469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to alkaline pH","synonyms":[{"name":"down regulation of cellular response to alkaline pH","type":"exact"},{"name":"down regulation of cellular response to alkalinity","type":"related"},{"name":"down regulation of cellular response to basic pH","type":"exact"},{"name":"down-regulation of cellular response to alkaline pH","type":"exact"},{"name":"down-regulation of cellular response to alkalinity","type":"related"},{"name":"down-regulation of cellular response to basic pH","type":"exact"},{"name":"downregulation of cellular response to alkaline pH","type":"exact"},{"name":"downregulation of cellular response to alkalinity","type":"related"},{"name":"downregulation of cellular response to basic pH","type":"exact"},{"name":"inhibition of cellular response to alkaline pH","type":"narrow"},{"name":"inhibition of cellular response to alkalinity","type":"narrow"},{"name":"inhibition of cellular response to basic pH","type":"narrow"},{"name":"negative regulation of cellular response to alkalinity","type":"broad"},{"name":"negative regulation of cellular response to basic pH","type":"exact"}],"termid":"GO:1900068"}


id: PATO:0000671
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000671 water value (obsolete PATO:0000671)","termid":"PATO:0000671"}


id: GO:0006463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.","definition_xrefs":["GOC:jl","Wikipedia:Steroid_hormone_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"steroid hormone receptor complex assembly","termid":"GO:0006463"}


id: GO:0032768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monooxygenase activity","termid":"GO:0032768"}


id: PR:Q9P7L0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21C3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.14c","synonyms":[{"name":"Spom972h-SPBC21C3.14c","type":"exact"}],"termid":"PR:Q9P7L0"}


id: GO:0015638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a microcin from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"microcin transmembrane transporter activity","synonyms":[{"name":"microcin uptake permease activity","type":"exact"}],"termid":"GO:0015638"}


id: GO:0006973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of glycerol within a cell, for example by increased glycerol biosynthesis combined with decreased permeability of the cell membrane to glycerol, in response to the detection of a hyperosmotic environment.","definition_xrefs":["PMID:11752666","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"},{"relation_name":"part_of","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular accumulation of glycerol","termid":"GO:0006973"}


id: RO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetically_interacts_with","termid":"RO:0002435"}


id: PR:O13883
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol glycan anchor biosynthesis class U protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02066","PANTHER:PTHR13121:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component GAB1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.01","secondary_identifiers":["UniProtKB:O13883"],"synonyms":[{"name":"Spom972h-PIGU","type":"exact"}],"termid":"PR:O13883"}


id: GO:0043574
data:
  {"annotated_genes":["SJAG_02693","SJAG_02034","SJAG_02797","SJAG_05315","SJAG_01165","SJAG_02619","SJAG_00702","SJAG_03324","SJAG_00326","SJAG_00891","SJAG_02997","SJAG_03440","SJAG_01854","SJAG_04763","SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70911,73126,63521,92040,106651,100630,70328,72130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[73290,92520,70938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[112426,96792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[91011,86132,106652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04763":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peroxisomal transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0043574","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: FYPO:0002505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein palmitoylation","synonyms":[{"name":"reduced protein palmitoylation","type":"exact"}],"termid":"FYPO:0002505"}


id: GO:0044265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a macromolecule, any large molecule including proteins, nucleic acids and carbohydrates, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular macromolecule catabolic process (obsolete GO:0044265)","synonyms":[{"name":"cellular biopolymer catabolic process","type":"exact"},{"name":"cellular macromolecule breakdown","type":"exact"},{"name":"cellular macromolecule catabolism","type":"exact"},{"name":"cellular macromolecule degradation","type":"exact"}],"termid":"GO:0044265"}


id: PBO:0052697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16 pseudogene 5","termid":"PBO:0052697"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: PBO:0082849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper chaperone for superoxide dismutase Sod1p; involved in oxidative stress protection; Met-X-Cys-X2-Cys motif within N-terminus is involved in insertion of copper into Sod1p under conditions of copper deprivation; required for regulation of yeast copper genes in response to DNA-damaging agents; protein abundance increases in response to DNA replication stress; human homolog CCS can complement yeast ccs1 null mutant","termid":"PBO:0082849"}


id: GO:0004995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a tachykinin neuropeptide and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["Wikipedia:Tachykinin","GOC:ai","PMID:7639617","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"tachykinin receptor activity","termid":"GO:0004995"}


id: GO:0006480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal amino acid of a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid methylation","termid":"GO:0006480"}


id: PBO:0028442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028442"}


id: GO:0032476
data:
  {"annotated_genes":["SJAG_04568","SJAG_01865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87478,108966],"is_not":false,"summary":null,"term":"GO:0032476"}]},"cv_name":"cellular_component","definition":"A complex that possesses di-trans,poly-cis-decaprenylcistransferase activity; involved in ubiquinone biosynthesis.","definition_xrefs":["PMID:14519123","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01865":null,"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decaprenyl diphosphate synthase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032476","terms_by_termid":{"GO:0032476":null}}


id: PBO:0061847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OLA1 pseudogene 1","termid":"PBO:0061847"}


id: PBO:0089746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved triglyceride mobilization ICE2 family","termid":"PBO:0089746"}


id: PBO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 95","termid":"PBO:0042863"}


id: PBO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 239 member C","termid":"PBO:0047252"}


id: PBO:0056703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 1","termid":"PBO:0056703"}


id: PBO:0057448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 568","termid":"PBO:0057448"}


id: SO:0000712
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a transcript that has a translational frameshift.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"translationally_frameshifted","termid":"SO:0000887"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_transcript_with_translational_frameshift","synonyms":[{"name":"gene with transcript with translational frameshift","type":"exact"}],"termid":"SO:0000712"}


id: MOD:00379
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine microcin E492 siderophore ester.","definition_xrefs":["Unimod:448#C-term","PubMed:15102848","RESID:AA0374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine microcin E492 siderophore ester","synonyms":[{"name":"L-serine microcin E492 siderophore ester","type":"exact"},{"name":"MOD_RES Serine microcin E492 siderophore ester","type":"exact"},{"name":"Microcin","type":"related"},{"name":"N-[5-(6-O-seryl-beta-glucosyl)-2,3-dihydroxybenzoyl]-O-[N-(2,3-dihydroxybenzoyl)-O-[N-(2,3-dihydroxybenzoyl)seryl]seryl]serine","type":"exact"},{"name":"microcin E492 siderophore ester from serine","type":"related"}],"termid":"MOD:00379"}


id: GO:2000458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"}


id: GO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene transport","termid":"GO:0071716"},{"relation_name":"is_a","term_name":"sodium-independent icosanoid transport","termid":"GO:0071718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-independent leukotriene transport","termid":"GO:0071719"}


id: GO:0098608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylselenol + H2O => H2Se + CH3OH.","definition_xrefs":["PMID:17451884","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylselenol demethylase activity","secondary_identifiers":["Reactome:R-HSA-2408530"],"termid":"GO:0098608"}


id: GO:0042336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Synthesis and deposition of a protein-based noncellular, hardened, or membranous secretion from an epithelial sheet, occurring as part of the molting cycle. Examples of this process are found in invertebrate species.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete cuticle development involved in protein-based cuticle molting cycle (obsolete GO:0042336)","synonyms":[{"name":"cuticle anabolism during molting","type":"broad"},{"name":"cuticle biosynthetic process during molting","type":"broad"},{"name":"cuticle development involved in protein-based cuticle molting cycle","type":"exact"},{"name":"cuticle formation during molting","type":"broad"},{"name":"cuticle synthesis during molting","type":"broad"}],"termid":"GO:0042336"}


id: FYPO:0000483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mitotic recombination is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic recombination","termid":"FYPO:0000481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic recombination","synonyms":[{"name":"increased rate of mitotic recombination during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic recombination during vegetative growth","type":"exact"},{"name":"mitotic recombination: increased rate","type":"related"}],"termid":"FYPO:0000483"}


id: PBO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 4, pseudogene","termid":"PBO:0044490"}


id: FYPO:0001590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during vegetative growth","termid":"FYPO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased lysine import during vegetative growth","synonyms":[{"name":"decreased L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-lysine import during vegetative growth","type":"exact"},{"name":"decreased lysine import during mitotic cell cycle","type":"related"},{"name":"decreased lysine import into cell during vegetative growth","type":"exact"},{"name":"decreased lysine uptake during vegetative growth","type":"exact"},{"name":"reduced lysine import during vegetative growth","type":"exact"}],"termid":"FYPO:0001590"}


id: PBO:0089617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane beta-glucan biosynthesis protein","termid":"PBO:0089617"}


id: PBO:0012823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-required_for","termid":"PBO:0012823"}


id: PR:O13777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1610.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.01","synonyms":[{"name":"Spom972h-saf5","type":"exact"}],"termid":"PR:O13777"}


id: GO:2000967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"negatively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"negative regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000967"}


id: GO:0016432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA uridine = 5'-methylthioadenosine + tRNA 3-(3-amino-3-carboxypropyl)-uridine.","definition_xrefs":["EC:2.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0016765","GO:0003674","GO:0003824","GO:0140101"],"is_obsolete":false,"name":"tRNA-uridine aminocarboxypropyltransferase activity","secondary_identifiers":["MetaCyc:2.5.1.25-RXN","RHEA:12300"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA-uridine 3-(3-amino-3-carboxypropyl)transferase activity","type":"related"}],"termid":"GO:0016432"}


id: PBO:0064182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XI, pseudogene","termid":"PBO:0064182"}


id: GO:1900303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of laminaritriose transport","termid":"GO:1900303"}


id: GO:0035846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the oviduct epithelium over time from its initial formation to the mature structure. An oviduct is a tube through which an ova passes from the ovary to the uterus, or from the ovary to the outside of the organism. The oviduct epithelium is the specialized epithelium that lines the oviduct.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"oviduct development","termid":"GO:0060066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oviduct epithelium development","synonyms":[{"name":"fallopian tube epithelium development","type":"narrow"}],"termid":"GO:0035846"}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: MOD:00305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues, an L-serine residue and a eight-iron seven-sulfur cluster to hexakis-L-cysteinyl L-serinyl octairon heptasulfide.","definition_xrefs":["PubMed:12215645","PubMed:10525412","PubMed:9063865","RESID:AA0300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","synonyms":[{"name":"Cys6Ser-[8Fe7S]","type":"exact"},{"name":"METAL Iron-sulfur (8Fe-7S)","type":"exact"},{"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","type":"exact"},{"name":"nitrogenase P-cluster","type":"exact"}],"termid":"MOD:00305"}


id: PR:P87050
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"Spom972h-cdr2","type":"exact"}],"termid":"PR:P87050"}


id: PBO:0058898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12116","termid":"PBO:0058898"}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: FYPO:0002392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein acetylation during vegetative growth","synonyms":[{"name":"abnormal protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002392"}


id: PBO:0064542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 3, pseudogene","termid":"PBO:0064542"}


id: RO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A child nucleus relationship in which the cells are part of a hermaphroditic organism","direct_ancestors":[{"relation_name":"is_a","term_name":"child_nucleus_of","termid":"RO:0002476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"child_nucleus_of_in_hermaphrodite","termid":"RO:0002477"}


id: PBO:0083611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious ORF that overlaps YDR520C; mutant increases expression of PIS1 and RPL3 in glycerol","termid":"PBO:0083611"}


id: PBO:0069310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 566, pseudogene","termid":"PBO:0069310"}


id: GO:0098542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to other organism","secondary_identifiers":["GO:0009814"],"synonyms":[{"name":"defence response incompatible interaction","type":"narrow"},{"name":"defence response to pathogen, incompatible interaction","type":"narrow"},{"name":"defense response, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogen","type":"narrow"}],"termid":"GO:0098542"}


id: PBO:0041707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 2","termid":"PBO:0041707"}


id: PBO:0051656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 11","termid":"PBO:0051656"}


id: GO:0009735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokinin","synonyms":[{"name":"response to cytokinin stimulus","type":"exact"}],"termid":"GO:0009735"}


id: PR:O13619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP22H7.03 gene.","definition_xrefs":["UniProtKB:O13619","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P22H7.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP22H7.03","synonyms":[{"name":"Spom972h-SPBP22H7.03","type":"exact"}],"termid":"PR:O13619"}


id: SO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified methionine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_methionine","secondary_identifiers":["MOD:00913"],"synonyms":[{"name":"ModMet","type":"exact"},{"name":"modified L methionine","type":"exact"},{"name":"modified L-methionine","type":"exact"}],"termid":"SO:0001395"}


id: GO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of salicylic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salicylic acid metabolic process","termid":"GO:0010337"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"regulates","term_name":"salicylic acid biosynthetic process","termid":"GO:0009697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of salicylic acid biosynthetic process","termid":"GO:0080142"}


id: PBO:0054125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1491","termid":"PBO:0054125"}


id: GO:0032035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the tail region of a myosin II heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin tail binding","termid":"GO:0032029"},{"relation_name":"is_a","term_name":"myosin II heavy chain binding","termid":"GO:0032038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin II tail binding","termid":"GO:0032035"}


id: GO:0035489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/G mispair.","definition_xrefs":["GOC:jh","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"guanine/guanine mispair binding","synonyms":[{"name":"G/G mispair binding","type":"exact"}],"termid":"GO:0035489"}


id: PBO:0030778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercaptoethanol","termid":"PBO:0030778"}


id: GO:1902670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to carbon dioxide.","definition_xrefs":["GO_REF:0000067","PMID:15491402","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carbon dioxide binding","synonyms":[{"name":"CO2 binding","type":"exact"}],"termid":"GO:1902670"}


id: PBO:0059336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S7 pseudogene 1","termid":"PBO:0059336"}


id: PBO:0084537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p14.5 protein family; functionally complements Mmf1p function when targeted to mitochondria; heat shock inducible; high-dosage growth inhibitor; forms a homotrimer in vitro; HMF1 has a paralog, MMF1, that arose from the whole genome duplication","termid":"PBO:0084537"}


id: PBO:0027519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_meiotic_interphase","termid":"PBO:0027519"}


id: PBO:0071997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 26","termid":"PBO:0071997"}


id: PBO:0057703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1290","termid":"PBO:0057703"}


id: PBO:0110377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL9R pseudogene 3","termid":"PBO:0110377"}


id: GO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a dense core granule membrane to the plasma membrane.","definition_xrefs":["GOC:PARL","PMID:26575293","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"},{"relation_name":"part_of","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0051179","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"dense core granule docking","termid":"GO:0061790"}


id: GO:0016483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Increases the activity of the enzyme tryptophase hydroxylase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"tryptophan hydroxylase activator activity","termid":"GO:0016483"}


id: PBO:0029813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization_during_mitotic_interphase","termid":"PBO:0029813"}


id: PBO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin family member 5, pseudogene","termid":"PBO:0061855"}


id: PR:000027556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated form in which the phosphorylation occurs at the Ser or Thr residue within the LLPKx[ST] motif by the mitotic checkpoint serine/threonine-protein kinase BUB1. Example: UniProtKB:P04910, Ser-122, MOD:00046.","definition_xrefs":["PRO:CNA","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2 phosphorylated form","termid":"PR:000027552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated 2","synonyms":[{"name":"HTA2/Phos:2","type":"exact"}],"termid":"PR:000027556"}


id: PBO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0005697"}


id: PBO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A6, pseudogene","termid":"PBO:0046881"}


id: GO:0033175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All non-F1 subunits of the chloroplast hydrogen-transporting ATP synthase, including integral and peripheral chloroplast thylakoid membrane proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"chloroplast proton-transporting ATP synthase complex","termid":"GO:0045320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(o)","synonyms":[{"name":"chloroplast proton-transporting ATP synthase complex, coupling factor CF(0)","type":"exact"},{"name":"chloroplast proton-transporting F-type ATPase complex, coupling factor CF(o)","type":"exact"}],"termid":"GO:0033175"}


id: PBO:0059535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Phe (UUU/C)","termid":"PBO:0059535"}


id: GO:0097062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a dendritic spine in a stable functional or structural state. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["PMID:20410104","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"dendritic spine organization","termid":"GO:0097061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine maintenance","termid":"GO:0097062"}


id: PBO:0090916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone","termid":"PBO:0090916"}


id: PBO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_anatomical_entity","termid":"PBO:0006173"}


id: MOD:00392
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-decanoyl-L-threonine.","definition_xrefs":["RESID:AA0387","Unimod:449#T","PubMed:11546772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-decanoylated residue","termid":"MOD:00668"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-decanoyl-L-threonine","synonyms":[{"name":"(2S)-2-amino-3-(decanoyloxy)propanoic acid","type":"exact"},{"name":"Decanoyl","type":"related"},{"name":"L-threonine decanoate ester","type":"exact"},{"name":"LIPID O-decanoyl threonine","type":"exact"},{"name":"O-decanoyl-L-threonine","type":"exact"},{"name":"O-decanoylated L-threonine","type":"exact"},{"name":"O3-decanoyl-L-threonine","type":"exact"},{"name":"ODecThr","type":"exact"},{"name":"lipid","type":"related"}],"termid":"MOD:00392"}


id: PBO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Cut12","termid":"PBO:0003238"}


id: PBO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructosamine 3 kinase related protein","termid":"PBO:0047729"}


id: PBO:0000787
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q deficiency","termid":"PBO:0000787"}


id: PBO:0005549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA reductase Hmg1","termid":"PBO:0005549"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: GO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of phosphate ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["PMID:25287933","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal phosphate excretion","synonyms":[{"name":"renal phosphate ion excretion","type":"exact"}],"termid":"GO:0044722"}


id: FYPO:0001842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylyl cyclase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal adenylyl cyclase activity","termid":"FYPO:0001841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased adenylyl cyclase activity","synonyms":[{"name":"increased adenylate cyclase activity","type":"exact"}],"termid":"FYPO:0001842"}


id: PBO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 9","termid":"PBO:0060573"}


id: GO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"B cell receptor signaling pathway","synonyms":[{"name":"B cell receptor signalling pathway","type":"exact"},{"name":"B lymphocyte receptor signaling pathway","type":"exact"},{"name":"B lymphocyte receptor signalling pathway","type":"exact"},{"name":"B-cell receptor signaling pathway","type":"exact"},{"name":"B-cell receptor signalling pathway","type":"exact"},{"name":"B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050853"}


id: PBO:0054112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1477","termid":"PBO:0054112"}


id: PBO:0038854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 1","termid":"PBO:0038854"}


id: PBO:0028447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity,_glutathione_synthetase_to_homoglutathione_synthetase_activity","termid":"PBO:0028447"}


id: FYPO:0005975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lithium ion export from the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal lithium export","synonyms":[{"name":"normal lithium export during mitotic cell cycle","type":"related"},{"name":"normal lithium export during vegetative growth","type":"exact"},{"name":"normal lithium export from cell","type":"exact"},{"name":"normal lithium ion export from cell","type":"exact"}],"termid":"FYPO:0005975"}


id: PBO:0085872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; HVG1 has a paralog, VRG4, that arose from the whole genome duplication","termid":"PBO:0085872"}


id: PR:O13800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rdl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rdl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.03c","synonyms":[{"name":"RAD51D-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rdl1","type":"exact"}],"termid":"PR:O13800"}


id: PR:Q9C0X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB8E5.07c","synonyms":[{"name":"Spom972h-rrp12","type":"exact"}],"termid":"PR:Q9C0X8"}


id: PBO:0075546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1L-ADORA2A readthrough (NMD candidate)","termid":"PBO:0075546"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GOC:bhm","PMID:18790874","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: PBO:0015677
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAt1 Compensation","termid":"PBO:0015677"}


id: GO:0071018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that contains the U12, U5 and U6atac snRNPs bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the U12, U5 and U6atac snRNPs.","definition_xrefs":["GOC:krc","ISBN:0879695897","ISBN:0879697393","GOC:ab","GOC:mah","PMID:16201866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U12-type spliceosomal complex","termid":"GO:0005689"},{"relation_name":"is_a","term_name":"catalytic step 2 spliceosome","termid":"GO:0071013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U12-type catalytic step 2 spliceosome","synonyms":[{"name":"AT-AC catalytic step 2 spliceosome","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C","type":"narrow"},{"name":"mammalian U12-type spliceosomal complex C1","type":"narrow"},{"name":"minor catalytic step 2 spliceosome","type":"exact"},{"name":"yeast U12-type spliceosomal complex A2-2","type":"narrow"}],"termid":"GO:0071018"}


id: PBO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1 (predicted)","termid":"PBO:0015253"}


id: PBO:0045451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase like 4","termid":"PBO:0045451"}


id: PBO:0044115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1B","termid":"PBO:0044115"}


id: FYPO:0001217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear import is abnormal. Nuclear import is the directed movement of any substance out of the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport during vegetative growth","termid":"FYPO:0000518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear import","synonyms":[{"name":"abnormal nuclear import during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear import during vegetative growth","type":"exact"}],"termid":"FYPO:0001217"}


id: FYPO:0007406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature long non-coding RNA (lncRNA) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature ncRNA level","termid":"FYPO:0006466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased lncRNA level","synonyms":[{"name":"decreased lncRNA accumulation","type":"related"},{"name":"decreased lncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased lncRNA level during vegetative growth","type":"exact"},{"name":"decreased lncRNA transcript level","type":"broad"},{"name":"decreased long non-coding RNA level","type":"exact"},{"name":"decreased mature lncRNA level","type":"exact"},{"name":"reduced lncRNA level","type":"exact"}],"termid":"FYPO:0007406"}


id: PBO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_nucleation_from_eMTOC","termid":"PBO:0035757"}


id: GO:0051266
data:
  {"annotated_genes":["SJAG_01786"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93350],"is_not":false,"summary":null,"term":"GO:0051266"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: siroheme + 2 H+ = Fe(2+) + sirohydrochlorin.","definition_xrefs":["RHEA:24360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferrochelatase activity","termid":"GO:0004325"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sirohydrochlorin ferrochelatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.99.1.4","KEGG_REACTION:R02864","MetaCyc:SIROHEME-FERROCHELAT-RXN"],"synonyms":[{"name":"siroheme ferro-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"siroheme synthase activity","type":"broad"},{"name":"sirohydrochlorin ferro-lyase activity","type":"exact"}],"termid":"GO:0051266","terms_by_termid":{"GO:0051266":null}}


id: PBO:0029614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_stubby_vegetative_cell","termid":"PBO:0029614"}


id: GO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to protozoan","secondary_identifiers":["GO:0042833"],"synonyms":[{"name":"resistance to pathogenic protozoa","type":"related"},{"name":"response to protozoa","type":"exact"},{"name":"response to protozoon","type":"exact"}],"termid":"GO:0001562"}


id: GO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis by symbiont of host cells (obsolete GO:0001898)","synonyms":[{"name":"regulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001898"}


id: PBO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Cysteine","termid":"PBO:0000963"}


id: GO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-epi-isozizaene + diphosphate.","definition_xrefs":["RHEA:25992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"epi-isozizaene synthase activity","secondary_identifiers":["KEGG_REACTION:R07830","EC:4.2.3.37","MetaCyc:RXN-9349"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(+)-epi-isozizaene-forming] activity","type":"exact"}],"termid":"GO:0052680"}


id: SO:1000124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000124 sequence_variant_causing_partial_loss_of_function_of_polypeptide (obsolete SO:1000124)","synonyms":[{"name":"mutation causing partial loss of function of polypeptide","type":"related"},{"name":"partial loss of function of polypeptide","type":"exact"},{"name":"sequence variant causing partial loss of function of polypeptide","type":"exact"}],"termid":"SO:1000124"}


id: PBO:0059571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1 pseudogene 3","termid":"PBO:0059571"}


id: PBO:0053264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1","termid":"PBO:0053264"}


id: GO:1901439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toluene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of toluene metabolic process","termid":"GO:1901437"},{"relation_name":"positively_regulates","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of toluene metabolic process","synonyms":[{"name":"activation of methylbenzene metabolic process","type":"exact"},{"name":"activation of methylbenzene metabolism","type":"exact"},{"name":"activation of toluene metabolic process","type":"narrow"},{"name":"activation of toluene metabolism","type":"exact"},{"name":"positive regulation of methylbenzene metabolic process","type":"exact"},{"name":"positive regulation of methylbenzene metabolism","type":"exact"},{"name":"positive regulation of toluene metabolism","type":"exact"},{"name":"up regulation of methylbenzene metabolic process","type":"exact"},{"name":"up regulation of methylbenzene metabolism","type":"exact"},{"name":"up regulation of toluene metabolic process","type":"exact"},{"name":"up regulation of toluene metabolism","type":"exact"},{"name":"up-regulation of methylbenzene metabolic process","type":"exact"},{"name":"up-regulation of methylbenzene metabolism","type":"exact"},{"name":"up-regulation of toluene metabolic process","type":"exact"},{"name":"up-regulation of toluene metabolism","type":"exact"},{"name":"upregulation of methylbenzene metabolic process","type":"exact"},{"name":"upregulation of methylbenzene metabolism","type":"exact"},{"name":"upregulation of toluene metabolic process","type":"exact"},{"name":"upregulation of toluene metabolism","type":"exact"}],"termid":"GO:1901439"}


id: GO:0007209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by tachykinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"tachykinin receptor signaling pathway","termid":"GO:0007217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating tachykinin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by tachykinin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by tachykinin receptor signalling pathway","type":"related"},{"name":"tachykinin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007209"}


id: FYPO:0001542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of nickel ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular nickel level","synonyms":[{"name":"normal cellular nickel accumulation","type":"related"},{"name":"normal cellular nickel ion level","type":"exact"},{"name":"normal cellular nickel level during mitotic cell cycle","type":"related"},{"name":"normal cellular nickel level during vegetative growth","type":"exact"}],"termid":"FYPO:0001542"}


id: PBO:0043316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 6","termid":"PBO:0043316"}


id: PBO:0053977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1289","termid":"PBO:0053977"}


id: GO:0140111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the activation of choline trimethylamine-lyase by generation of an organic free radical on a glycine residue via a homolytic cleavage of S-adenosyl-L-methionine (SAM).","definition_xrefs":["PMID:24854437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-radical enzyme activating activity","termid":"GO:0043364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"[choline trimethylamine-lyase]-activating enzyme activity","secondary_identifiers":["MetaCyc:RXN-16470"],"termid":"GO:0140111"}


id: SO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-translated 93 nt antisense RNA that binds its target ompF mRNA and regulates ompF expression by inhibiting translation and inducing degradation of the message.","direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MicF_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/MicF_RNA"],"synonyms":[{"name":"MicF RNA","type":"exact"}],"termid":"SO:0000383"}


id: GO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052206)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052206"}


id: GO:0042009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-15.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-15 binding","synonyms":[{"name":"IL-15 binding","type":"exact"}],"termid":"GO:0042009"}


id: PR:O74372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- duo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit duo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.08c","synonyms":[{"name":"Spom972h-duo1","type":"exact"},{"name":"outer kinetochore protein duo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74372"}


id: GO:0031499
data:
  {"annotated_genes":["SJAG_03984","SJAG_16455","SJAG_02725","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70351,75449,77132,95111],"is_not":false,"summary":null,"term":"GO:0031499"}]},"cv_name":"cellular_component","definition":"A multiprotein complex having distributive polyadenylation activity of a variety of RNA substrates including hypomodified and incorrectly folded tRNAs, pre-snRNAs, pre-snoRNAs, incorrectly spliced or processed pre-mRNAs, cryptic unstable transcripts (CUTs), pre-rRNAs and rRNA fragments released as part of rRNA processing. In S. cerevisiae, the complex consists of either Pap2 (also known as Trf4) or Trf5, Air1 or Air2, and Mtr4, and is involved in RNA 3'-end processing and in RNA surveillance and quality control.","definition_xrefs":["PMID:16374505","PMID:15935758","PMID:16373491","PMID:16431988","PMID:15828860","PMID:15935759","PMID:16973437","PMID:17410208","PMID:17652137","PMID:15173578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_02725":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"TRAMP complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:TRAMP_complex"],"synonyms":[{"name":"TRAMP4 complex","type":"narrow"},{"name":"TRAMP5 complex","type":"narrow"},{"name":"Trf4 complex","type":"narrow"},{"name":"Trf4 poly(A) polymerase complex","type":"narrow"},{"name":"Trf4p-Air2p-Mtr4p polyadenylation complex","type":"narrow"}],"termid":"GO:0031499","terms_by_termid":{"GO:0031499":null}}


id: PBO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein Mzt1 (predicted)","termid":"PBO:0001268"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: GO:0071322
data:
  {"annotated_genes":["SJAG_02444","SJAG_00574","SJAG_01754","SJAG_01254","SJAG_04026","SJAG_04312","SJAG_00472","SJAG_01699","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97314,102216,111714,101291,110691,104838,89836,101870,104338],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"},{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbohydrate stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071322","terms_by_termid":{"GO:0010619":null}}


id: GO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell differentiation","termid":"GO:0060374"}


id: PATO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A luminous flux quality inhering in a bearer by virtue of the bearer's emitting longer wavelength light following the absorption of shorter wavelength radiation; fluorescence is common with aromatic compounds with several rings joined together.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescence","termid":"PATO:0000018"}


id: PBO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 3","termid":"PBO:0045257"}


id: PBO:0089054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2","termid":"PBO:0089054"}


id: PBO:0055764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA TGF-beta/SMAD3 pathway interacting","termid":"PBO:0055764"}


id: GO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates meiotic nuclear division.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100023)","termid":"GO:0100023"}


id: GO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine/serine/threonine phosphatase activity","termid":"GO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016788","GO:0016787","GO:0003674","GO:0004721"],"is_obsolete":false,"name":"JUN kinase phosphatase activity","termid":"GO:0008579"}


id: PBO:0045714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 2","termid":"PBO:0045714"}


id: PBO:0083444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified essential ORF SPC110/YDR356W","termid":"PBO:0083444"}


id: PBO:0079157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 16","termid":"PBO:0079157"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: PBO:0046126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 5","termid":"PBO:0046126"}


id: GO:0048235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a haploid sperm cell within the plant gametophyte.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","CL:0000366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen sperm cell differentiation","secondary_identifiers":["GO:0048234"],"synonyms":[{"name":"male gamete generation","type":"broad"},{"name":"male gametophyte sperm cell differentiation","type":"exact"},{"name":"sperm cell differentiation","type":"broad"}],"termid":"GO:0048235"}


id: FYPO:0003361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal superoxide dismutase activity","termid":"FYPO:0003361"}


id: GO:1904193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24498161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte apoptotic process","termid":"GO:1904192"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte apoptotic process","synonyms":[{"name":"down regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"down-regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"down-regulation of cholangiocyte apoptotic process","type":"exact"},{"name":"down-regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"down-regulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"downregulation of cholangiocyte apoptosis","type":"narrow"},{"name":"downregulation of cholangiocyte apoptotic process","type":"exact"},{"name":"downregulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"downregulation of epithelial cell of bile duct apoptotic process","type":"exact"},{"name":"inhibition of cholangiocyte apoptosis","type":"narrow"},{"name":"inhibition of cholangiocyte apoptotic process","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"inhibition of epithelial cell of bile duct apoptotic process","type":"narrow"},{"name":"negative regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"negative regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904193"}


