# terms

id: PBO:0053116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 2","termid":"PBO:0053116"}


id: PBO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp103 (predicted)","termid":"PBO:0003415"}


id: GO:0055048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart, in the absence of centrosomes. Formation is initiated by the nucleation of microtubules (MTs) in the vicinity of condensed chromatin. MTs then attach to and congress around the chromatin due to activity of microtubule motors. A bipolar spindle is formed by focusing of the terminal ends of the MT array into spindle poles by molecular motors and cross-linking proteins.","definition_xrefs":["GOC:expert_rg","PMID:15034926","GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"anastral spindle assembly","termid":"GO:0055048"}


id: GO:0002574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a thrombocyte, a nucleated cell found in all vertebrates but mammals involved in hemostasis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thrombocyte differentiation","termid":"GO:0002574"}


id: GO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an EP3 subtype prostaglandin E2 receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor binding","termid":"GO:0031862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"EP3 subtype prostaglandin E2 receptor binding","synonyms":[{"name":"EP3 subtype prostaglandin E2 receptor ligand","type":"narrow"},{"name":"prostanoid EP3 receptor binding","type":"exact"}],"termid":"GO:0031866"}


id: RO:0002021
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and a barrier, where the process occurs in a region spanning the barrier. For cellular processes the barrier is typically a membrane. Examples include transport across a membrane and membrane depolarization.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"RO:0002479"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_across","termid":"RO:0002021"}


id: PBO:0064973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 29, pseudogene","termid":"PBO:0064973"}


id: PBO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-24","termid":"PBO:0051330"}


id: PBO:0084821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function involved in lipid homeostasis; integral membrane protein that localizes to the mitochondrial outer membrane; involved in mitochondrial morphology; interacts genetically with MDM10, and other members of the ERMES complex; contains five predicted transmembrane domains","termid":"PBO:0084821"}


id: GO:0045593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of cumulus cell differentiation","termid":"GO:0045592"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cumulus cell differentiation","synonyms":[{"name":"down regulation of cumulus cell differentiation","type":"exact"},{"name":"down-regulation of cumulus cell differentiation","type":"exact"},{"name":"downregulation of cumulus cell differentiation","type":"exact"},{"name":"inhibition of cumulus cell differentiation","type":"narrow"},{"name":"negative regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045593"}


id: GO:0031872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 proteinase activated receptor binding","synonyms":[{"name":"thrombin receptor binding","type":"exact"},{"name":"type 1 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031872"}


id: GO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(L-gamma-glutamylamino)butanoate + H2O = 4-aminobutanoate + L-glutamate.","definition_xrefs":["EC:3.5.1.94","RHEA:19737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"gamma-glutamyl-gamma-aminobutyrate hydrolase activity","secondary_identifiers":["MetaCyc:RXN0-3942","KEGG_REACTION:R07419"],"synonyms":[{"name":"4-(glutamylamino)butanoate amidohydrolase activity","type":"related"},{"name":"PuuD","type":"related"},{"name":"YcjL","type":"related"},{"name":"gamma-glutamyl-GABA hydrolase activity","type":"related"}],"termid":"GO:0033969"}


id: GO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"eugenol catabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol catabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol catabolism","type":"exact"},{"name":"eugenic acid catabolic process","type":"exact"},{"name":"eugenic acid catabolism","type":"exact"},{"name":"eugenol breakdown","type":"exact"},{"name":"eugenol catabolism","type":"exact"},{"name":"eugenol degradation","type":"exact"}],"termid":"GO:0042856"}


id: GO:0022849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0038023","GO:0022857"],"is_obsolete":false,"name":"glutamate-gated calcium ion channel activity","termid":"GO:0022849"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0044248","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: PBO:0065584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha","termid":"PBO:0065584"}


id: GO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a metallo-oxygen cluster.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster (obsolete GO:0030925)","termid":"GO:0030925"}


id: GO:1900827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane depolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1900827"}


id: PR:Q9HDX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.01","synonyms":[{"name":"Spom972h-mfc1","type":"exact"}],"termid":"PR:Q9HDX4"}


id: PBO:0070704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 8","termid":"PBO:0070704"}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: PBO:0040505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis and caspase activation inhibitor","termid":"PBO:0040505"}


id: PBO:0080685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 2","termid":"PBO:0080685"}


id: PBO:0053346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 229","termid":"PBO:0053346"}


id: PBO:0109230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF7 pseudogene 1","termid":"PBO:0109230"}


id: GO:0070054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Splicing of mRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"},{"relation_name":"is_a","term_name":"mRNA processing","termid":"GO:0006397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA splicing, via endonucleolytic cleavage and ligation","secondary_identifiers":["GO:0061012"],"synonyms":[{"name":"cytosolic mRNA splicing","type":"related"}],"termid":"GO:0070054"}


id: PBO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36","termid":"PBO:0004382"}


id: PBO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 neighbor","termid":"PBO:0047725"}


id: GO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pectin + H2O = pectate + acetate. This reaction is the hydrolysis of acetyl esters of pectin, producing pectate, partially esterified pectin.","definition_xrefs":["GOC:mengo_curators","PMID:9218776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"pectin acetylesterase activity","termid":"GO:0052793"}


id: PBO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae POL2","termid":"PBO:0018028"}


id: PBO:0082214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 3 subunit of the 20S proteasome; the only nonessential 20S subunit; may be replaced by the alpha 4 subunit (Pre6p) under stress conditions to create a more active proteasomal isoform","termid":"PBO:0082214"}


id: PBO:0070647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 18","termid":"PBO:0070647"}


id: PBO:0058808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7850","termid":"PBO:0058808"}


id: PBO:0055767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl and cystinyl aminopeptidase","termid":"PBO:0055767"}


id: PBO:0046080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 5","termid":"PBO:0046080"}


id: PBO:0029070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_cellular_response_to_nitric_oxide","termid":"PBO:0029070"}


id: GO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid at sites flanking regions of damaged DNA to which the Uvr ABC excinuclease complexes bind.","definition_xrefs":["GOC:mah","PMID:15192705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"excinuclease ABC activity","termid":"GO:0009381"}


id: SO:0000709
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A trans_splicing_acceptor_site which appends the 22nt SL2 RNA leader sequence to the 5' end of mRNAs. SL2 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_acceptor_site","termid":"SO:0000706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL2_acceptor_site","synonyms":[{"name":"SL2 acceptor site","type":"exact"}],"termid":"SO:0000709"}


id: FYPO:0009002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitochondrion distribution phenotype observed during mitotic interphase in which the length fraction of cytoplasmic microtubules that is bound to mitochondria is increased with respect to the wild type.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased mitochondrial-associated microtubule fraction during mitotic interphase","synonyms":[{"name":"increased microtubule-associated mitochondrial fraction during mitotic interphase","type":"related"}],"termid":"FYPO:0009002"}


id: PBO:0059964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 9","termid":"PBO:0059964"}


id: PBO:0047247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member A","termid":"PBO:0047247"}


id: GO:0010834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and shortening the telomeric DNA.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere maintenance via telomere shortening (obsolete GO:0010834)","synonyms":[{"name":"telomere maintenance via telomere shortening","type":"exact"}],"termid":"GO:0010834"}


id: GO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.","definition_xrefs":["EC:2.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0008276","GO:0016741","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.77-RXN","RHEA:12705","Reactome:R-HSA-5676966"],"synonyms":[{"name":"D-aspartyl/L-isoaspartyl methyltransferase activity","type":"related"},{"name":"L-aspartyl/L-isoaspartyl protein methyltransferase activity","type":"related"},{"name":"L-isoaspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"L-isoaspartyl/D-aspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein (D-aspartate) methyltransferase activity","type":"related"},{"name":"protein D-aspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartyl methyltransferase activity","type":"related"},{"name":"protein O-methyltransferase (L-isoaspartate)","type":"related"},{"name":"protein beta-aspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate(D-aspartate) O-methyltransferase activity","type":"related"},{"name":"protein-beta-aspartate O-methyltransferase activity","type":"related"}],"termid":"GO:0004719"}


id: PATO:0001871
data:
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id: PBO:0056200
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id: RO:0002636
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id: GO:0006681
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id: GO:0019222
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id: FYPO:0004891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation lasts for a longer time than normal during a cellular response to ionizing radiation. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may persist longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein modification during vegetative growth","termid":"FYPO:0000548"},{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of histone H2A phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"prolonged histone H2A phosphorylation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004891"}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: GO:0140394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of azoles, heterocyclic compound found in many biologically important substances, from one side of a membrane to the other according to the reaction: ATP + H2O + azole(in) = ADP + phosphate + azole(out).","definition_xrefs":["RHEA:33503","PMID:31501141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type azole transporter activity","synonyms":[{"name":"ATPase-coupled azole transmembrane transporter activity","type":"related"},{"name":"azole ABC transporter activity","type":"exact"}],"termid":"GO:0140394"}


id: GO:1903615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein tyrosine phosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:11129957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphoprotein phosphatase activity","termid":"GO:0032516"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine phosphatase activity","termid":"GO:1903613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein tyrosine phosphatase activity","synonyms":[{"name":"activation of PPT-phosphatase activity","type":"narrow"},{"name":"activation of PTP-phosphatase activity","type":"narrow"},{"name":"activation of PTPase activity","type":"narrow"},{"name":"activation of [phosphotyrosine]protein phosphatase activity","type":"narrow"},{"name":"activation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"narrow"},{"name":"activation of phosphotyrosine histone phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosine protein phosphatase activity","type":"narrow"},{"name":"activation of phosphotyrosylprotein phosphatase activity","type":"narrow"},{"name":"activation of protein phosphotyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein tyrosine phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphatase activity","type":"narrow"},{"name":"activation of protein-tyrosine-phosphate phosphohydrolase activity","type":"narrow"},{"name":"activation of tyrosine O-phosphate phosphatase activity","type":"narrow"},{"name":"activation of tyrosylprotein phosphatase activity","type":"narrow"},{"name":"positive regulation of PPT-phosphatase activity","type":"exact"},{"name":"positive regulation of PTP-phosphatase activity","type":"exact"},{"name":"positive regulation of PTPase activity","type":"exact"},{"name":"positive regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"positive regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"positive regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"positive regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"positive regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"positive regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"positive regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of PPT-phosphatase activity","type":"exact"},{"name":"up regulation of PTP-phosphatase activity","type":"exact"},{"name":"up regulation of PTPase activity","type":"exact"},{"name":"up regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of PPT-phosphatase activity","type":"exact"},{"name":"up-regulation of PTP-phosphatase activity","type":"exact"},{"name":"up-regulation of PTPase activity","type":"exact"},{"name":"up-regulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"up-regulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"up-regulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"up-regulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"up-regulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"up-regulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"up-regulation of tyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of PPT-phosphatase activity","type":"exact"},{"name":"upregulation of PTP-phosphatase activity","type":"exact"},{"name":"upregulation of PTPase activity","type":"exact"},{"name":"upregulation of [phosphotyrosine]protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphoprotein phosphatase (phosphotyrosine) activity","type":"exact"},{"name":"upregulation of phosphotyrosine histone phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosine protein phosphatase activity","type":"exact"},{"name":"upregulation of phosphotyrosylprotein phosphatase activity","type":"exact"},{"name":"upregulation of protein phosphotyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein tyrosine phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphatase activity","type":"exact"},{"name":"upregulation of protein-tyrosine-phosphate phosphohydrolase activity","type":"exact"},{"name":"upregulation of tyrosine O-phosphate phosphatase activity","type":"exact"},{"name":"upregulation of tyrosylprotein phosphatase activity","type":"exact"}],"termid":"GO:1903615"}


id: PATO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000222 muscle elevation (obsolete PATO:0000222)","termid":"PATO:0000222"}


id: PBO:0040164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipocyte associated metabolic related lncRNA 2","termid":"PBO:0040164"}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: GO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"endoderm development","termid":"GO:0007492"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm development","termid":"GO:0048382"}


id: GO:0097516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments at the core of a microvillus.","definition_xrefs":["GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"microvillus","termid":"GO:0005902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"microvillar actin bundle","termid":"GO:0097516"}


id: MOD:00805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetylaminoglucosyl)-L-serine.","definition_xrefs":["PubMed:3086323","PubMed:8404891","RESID:AA0398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(N-acetylamino)glucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-glucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) serine","type":"exact"},{"name":"CARBOHYD O-linked (HexNAc)","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)glucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-seryl-beta-N-acetylglucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylglucosaminyl)serine","type":"exact"},{"name":"OGlcNAcSer","type":"exact"}],"termid":"MOD:00805"}


id: GO:0051788
data:
  {"annotated_genes":["SJAG_02419","SJAG_04612","SJAG_00054","SJAG_02341","SJAG_01556","SJAG_00219","SJAG_04187","SJAG_03657","SJAG_03815","SJAG_00270","SJAG_00173","SJAG_03345","SJAG_01160","SJAG_00552","SJAG_01737","SJAG_04567","SJAG_05022"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105308,83858,71223,105307,107533,99639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[105622,105056,103351,104953,108841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[98835,85003,108216,83588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[106130,75709],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a misfolded protein stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to topologically incorrect protein","termid":"GO:0035966"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00270":null,"SJAG_00552":null,"SJAG_01160":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_04187":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to misfolded protein","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0051788","terms_by_termid":{"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: PBO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31 (predicted)","termid":"PBO:0017501"}


id: PBO:0029617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029617"}


id: GO:0009619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic bacteria (obsolete GO:0009619)","synonyms":[{"name":"resistance to pathogenic bacteria","type":"exact"}],"termid":"GO:0009619"}


id: PATO:0001390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A trisomy quality inhering in a bearer when part of the bearer's extra chromosome is attached to one of the other chromosomes, or if one of the bearer's chromosomes has two copies of part of its chromosome.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Partial_trisomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy","termid":"PATO:0001389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy","termid":"PATO:0001390"}


id: SO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base in the terminator codon is changed, but the terminator remains.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"synonymous_variant","termid":"SO:0001819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_retained_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"Jannovar:stop_retained_variant","type":"exact"},{"name":"VAAST:stop_retained","type":"exact"},{"name":"VAAST:stop_retained_variant","type":"exact"},{"name":"VEP:stop_retained_variant","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_STOP","type":"exact"},{"name":"snpEff:SYNONYMOUS_STOP","type":"exact"},{"name":"stop retained variant","type":"exact"}],"termid":"SO:0001567"}


id: GO:0061737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by leukotriene binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:21771892","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"leukotriene signaling pathway","termid":"GO:0061737"}


id: PR:Q9UTN9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YbaZ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkyltransferase-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.04c","secondary_identifiers":["UniProtKB:Q9UTN9"],"synonyms":[{"name":"Spom972h-ybaZ","type":"exact"}],"termid":"PR:Q9UTN9"}


id: PBO:0090076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate O-acyltransferase Sct1/Gpt1-like","termid":"PBO:0090076"}


id: FYPO:0002742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron transport RNAs are transcribed from genes whose products are involved in iron transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of iron transport gene mRNA during vegetative growth","synonyms":[{"name":"increased iron transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002742"}


id: PBO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.2.15","termid":"PBO:0001972"}


id: GO:0075288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"negatively_regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangiospore formation","termid":"GO:0075288"}


id: PBO:0082669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the DNA ligase IV complex; this complex mediates nonhomologous end joining in DNA double-strand break repair; sumoylated by Siz1p and Nfi1p SUMO ligases on Lys301; physically interacts with Dnl4p and Nej1p; homologous to mammalian XRCC4 protein","termid":"PBO:0082669"}


id: PBO:0043439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 1","termid":"PBO:0043439"}


id: PBO:0083277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation enhances replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene ELP4","termid":"PBO:0083277"}


id: PBO:0079994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 32","termid":"PBO:0079994"}


id: PBO:0084791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; mutation affects vacuolar protein sorting; putative transporter; member of the sugar porter family; VPS73 has a paralog, YBR241C, that arose from the whole genome duplication","termid":"PBO:0084791"}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_01268","SJAG_02245","SJAG_02228","SJAG_01732","SJAG_04624","SJAG_01964","SJAG_03455","SJAG_04479","SJAG_04100","SJAG_01384","SJAG_02075","SJAG_03086"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85108],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[76780,78371,77684,74312,77158,75677,78499,93469,98183,102524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[74030],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: PBO:0058444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5009","termid":"PBO:0058444"}


id: GO:0070614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tungstate (WO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tungstate is a bivalent oxoanion of tungsten.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tungstate ion transport","termid":"GO:0070614"}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: PBO:0050477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A5","termid":"PBO:0050477"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: GO:0035022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rac protein signal transduction","termid":"GO:0035020"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Rac protein signal transduction","termid":"GO:0016601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Rac protein signal transduction","synonyms":[{"name":"activation of Rac protein signal transduction","type":"narrow"},{"name":"stimulation of Rac protein signal transduction","type":"narrow"},{"name":"up regulation of Rac protein signal transduction","type":"exact"},{"name":"up-regulation of Rac protein signal transduction","type":"exact"},{"name":"upregulation of Rac protein signal transduction","type":"exact"}],"termid":"GO:0035022"}


id: PBO:0003183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn7","termid":"PBO:0003183"}


id: PBO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing G","termid":"PBO:0051790"}


id: PBO:0055766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia NUP98 fusion partner 1","termid":"PBO:0055766"}


id: PBO:0078248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25-1","termid":"PBO:0078248"}


id: PBO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_phase_transition","termid":"PBO:0031018"}


id: PBO:0038621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER2 pseudogene 1","termid":"PBO:0038621"}


id: PBO:0017547
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by E. coli RusA","termid":"PBO:0017547"}


id: GO:0062142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-beta-ethynylserine. L-beta-ethynylserine is an antibiotic produced by Streptomyces bacteria.","definition_xrefs":["PMID:3082841","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound biosynthetic process","termid":"GO:0120237"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-beta-ethynylserine biosynthetic process","termid":"GO:0062142"}


id: PBO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 7","termid":"PBO:0072208"}


id: PBO:0075408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 5B","termid":"PBO:0075408"}


id: GO:0022855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + glucose(out) = protein histidine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0003824","GO:0005215","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-glucose phosphotransferase system transporter activity","synonyms":[{"name":"glucose PTS transporter activity","type":"exact"}],"termid":"GO:0022855"}


id: GO:0098760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-7","synonyms":[{"name":"response to IL-7","type":"exact"}],"termid":"GO:0098760"}


id: FYPO:0000730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0000120"],"is_obsolete":false,"name":"long spindle","synonyms":[{"name":"elongated spindle","type":"exact"},{"name":"increased spindle length","type":"exact"},{"name":"long spindles","type":"exact"}],"termid":"FYPO:0000730"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: PBO:0016917
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIssion yeast Nima","termid":"PBO:0016917"}


id: PBO:0014603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor activator Rep1","termid":"PBO:0014603"}


id: PBO:0054246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1628","termid":"PBO:0054246"}


id: FYPO:0000117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal septum assembly","secondary_identifiers":["FYPO:0000170"],"synonyms":[{"name":"abnormal division septum assembly","type":"exact"},{"name":"abnormal division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal septation","type":"broad"},{"name":"abnormal septum assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septum assembly during vegetative growth","type":"exact"},{"name":"septation defects","type":"broad"},{"name":"septum formation: abnormal","type":"related"}],"termid":"FYPO:0000117"}


id: PBO:0058354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4727","termid":"PBO:0058354"}


id: PBO:0079021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 4-1","termid":"PBO:0079021"}


id: PBO:0069241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 496, pseudogene","termid":"PBO:0069241"}


id: GO:1901222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the non-canonical NF-kappaB signaling cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0042348","GO:0042345"],"synonyms":[{"name":"NF-KB import into nucleus","type":"narrow"},{"name":"NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"regulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901222"}


id: GO:1901616
data:
  {"annotated_genes":["SJAG_03804","SJAG_00244","SJAG_04048","SJAG_03786","SJAG_04320","SJAG_04192","SJAG_00237","SJAG_04954","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[77455,71984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[110235,84475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[78801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[95504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[72844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_03804":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic hydroxy compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null,"GO:1903457":null}}


id: GO:0016884
data:
  {"annotated_genes":["SJAG_03355","SJAG_01577","SJAG_04634","SJAG_02832","SJAG_02618","SJAG_05560","SJAG_00964","SJAG_02721","SJAG_00392","SJAG_00412","SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77967,106075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004066"},{"annotations":[71828,71330,70539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004088"},{"annotations":[113472,71861,74541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050567"},{"annotations":[89052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003922"},{"annotations":[74133],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"},{"annotations":[76470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003952"},{"annotations":[70202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004642"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of the amide nitrogen of glutamine to a substrate. Usually composed of two subunits or domains, one that first hydrolyzes glutamine, and then transfers the resulting ammonia to the second subunit (or domain), where it acts as a source of nitrogen.","definition_xrefs":["PMID:12360532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null,"SJAG_01577":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02832":null,"SJAG_03355":null,"SJAG_04549":null,"SJAG_04634":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0016003","EC:6.3.5.-"],"termid":"GO:0016884","terms_by_termid":{"GO:0003921":null,"GO:0003922":null,"GO:0003952":null,"GO:0004066":null,"GO:0004088":null,"GO:0004642":null,"GO:0050567":null}}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR12542:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: PBO:0028257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ornithine_carbamoyltransferase_activity","termid":"PBO:0028257"}


id: PBO:0090796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER flavin-containing N,N-dimethylaniline monooxygenase activity Fmo1","termid":"PBO:0090796"}


id: GO:1900327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mannotriose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"mannotriose transport","termid":"GO:2001095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mannotriose transport","termid":"GO:1900327"}


id: GO:0045196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:bf","PMID:20066083","GOC:mah","GOC:mtg_sensu","PMID:19375318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"asymmetric neuroblast division","termid":"GO:0055059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of neuroblast polarity","secondary_identifiers":["GO:0043339","GO:0043342"],"synonyms":[{"name":"establishment and/or maintenance of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045196"}


id: PBO:0082049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase); required for riboflavin biosynthesis from ribulose-5-phosphate, also has an unrelated function in mitochondrial respiration","termid":"PBO:0082049"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PR:O94660
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nitrilase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase nit2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.02","secondary_identifiers":["UniProtKB:O94660"],"synonyms":[{"name":"Spom972h-NIT1","type":"exact"}],"termid":"PR:O94660"}


id: PBO:0068088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 394","termid":"PBO:0068088"}


id: GO:0009823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytokinins, a class of adenine-derived compounds that can function in plants as plant growth regulators.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytokinin catabolic process","synonyms":[{"name":"cytokinin breakdown","type":"exact"},{"name":"cytokinin catabolism","type":"exact"},{"name":"cytokinin degradation","type":"exact"}],"termid":"GO:0009823"}


id: PBO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein beta","termid":"PBO:0044008"}


id: GO:1990177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing IHF heterodimers (an alpha and a beta chain) bound to DNA. IHF binds to double-stranded DNA in a structure- and sequence-specific manner and bends the DNA into a nucleosome-like structure, the bacterial nucleoid.","definition_xrefs":["PMID:17097674","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"DNA bending complex","termid":"GO:1990104"},{"relation_name":"part_of","term_name":"bacterial nucleoid","termid":"GO:0043590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IHF-DNA complex","synonyms":[{"name":"IHF complex","type":"exact"},{"name":"IHFa-IHFb-DNA complex","type":"exact"}],"termid":"GO:1990177"}


id: GO:0043379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a newly activated T cell acquires specialized features of a memory T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"immunological memory formation process","termid":"GO:0090715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell differentiation","synonyms":[{"name":"memory T cell development","type":"related"},{"name":"memory T lymphocyte differentiation","type":"exact"},{"name":"memory T-cell differentiation","type":"exact"},{"name":"memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043379"}


id: PBO:0069098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 345, pseudogene","termid":"PBO:0069098"}


id: PR:O14120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mvp1 gene.","definition_xrefs":["UniProtKB:O14120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin mvp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.06","synonyms":[{"name":"Spom972h-mvp1","type":"exact"}],"termid":"PR:O14120"}


id: GO:1901774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lincomycin.","definition_xrefs":["GOC:yaf","MetaCyc:PWY-6955","UniPathway:UPA00161","GOC:TermGenie","PMID:8577249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-glycoside biosynthetic process","termid":"GO:0016144"},{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"lincomycin metabolic process","termid":"GO:1901772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin biosynthetic process","synonyms":[{"name":"lincomycin anabolism","type":"exact"},{"name":"lincomycin biosynthesis","type":"exact"},{"name":"lincomycin formation","type":"exact"},{"name":"lincomycin synthesis","type":"exact"}],"termid":"GO:1901774"}


id: GO:0044597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving daunorubicin, a chemotherapeutic of the anthracycline family that is given as a treatment for some types of cancer.","definition_xrefs":["PMID:20837989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"daunorubicin metabolic process","termid":"GO:0044597"}


id: PBO:0028445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0028445"}


id: GO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lysine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity lysine transmembrane transporter activity","synonyms":[{"name":"high affinity lysine transmembrane transporter activity","type":"exact"},{"name":"high affinity lysine transporter activity","type":"broad"}],"termid":"GO:0005292"}


id: GO:1902155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G1 DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G1 DNA damage checkpoint signaling","termid":"GO:0072432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G1 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of mitotic cell cycle G1/S transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to mitotic cell cycle G1/S transition DNA damage checkpoint signaling","type":"exact"},{"name":"regulation of response to signal involved in mitotic cell cycle G1/S transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902155"}


id: MOD:02063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-phenylalanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-phenylalanine","termid":"MOD:00201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-phenylalanine residue","synonyms":[{"name":"XlnkDPhe","type":"exact"}],"termid":"MOD:02063"}


id: PBO:0039902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF4 antisense RNA 1","termid":"PBO:0039902"}


id: PBO:0047543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 2","termid":"PBO:0047543"}


id: PBO:0062590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 5","termid":"PBO:0062590"}


id: PBO:0057759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1972-2","termid":"PBO:0057759"}


id: PR:P0CT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-2 gene.","definition_xrefs":["UniProtKB:P0CT35","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-2 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.08","synonyms":[{"name":"Spom972h-Tf2-2","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT35"}


id: PBO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 5","termid":"PBO:0070621"}


id: PBO:0063062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate kinase 2","termid":"PBO:0063062"}


id: PATO:0001043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in an entity by virtue of the bearer's propensity to resist an external stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility toward","synonyms":[{"name":"susceptibility","type":"exact"}],"termid":"PATO:0001043"}


id: GO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to heat stress (obsolete GO:0061408)","termid":"GO:0061408"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: GO:0022625
data:
  {"annotated_genes":["SJAG_02840","SJAG_04534","SJAG_03133","SJAG_02243","SJAG_02121","SJAG_02535","SJAG_02802","SJAG_04020","SJAG_01568","SJAG_00537","SJAG_01365","SJAG_01087","SJAG_02597","SJAG_04847","SJAG_00155","SJAG_02890","SJAG_03666","SJAG_02510","SJAG_03922","SJAG_02871","SJAG_03197","SJAG_04478","SJAG_03364","SJAG_01721","SJAG_00166","SJAG_00034","SJAG_03423","SJAG_04414","SJAG_03919","SJAG_01364","SJAG_02207","SJAG_01411","SJAG_01853","SJAG_04176","SJAG_00384","SJAG_00749","SJAG_02546","SJAG_02611","SJAG_00748","SJAG_00220","SJAG_01322","SJAG_03971","SJAG_04897","SJAG_01194","SJAG_04066","SJAG_01676","SJAG_03127","SJAG_01202","SJAG_00629","SJAG_03122","SJAG_07013","SJAG_02081","SJAG_03425","SJAG_01608","SJAG_02531","SJAG_01606","SJAG_05216","SJAG_02891","SJAG_04160","SJAG_00940","SJAG_02312","SJAG_04626","SJAG_03335","SJAG_00765","SJAG_01588","SJAG_03043","SJAG_00726","SJAG_03159","SJAG_03326","SJAG_01128","SJAG_00921","SJAG_06612","SJAG_04304","SJAG_01551","SJAG_02283","SJAG_05248","SJAG_02755","SJAG_03383","SJAG_01565","SJAG_01580","SJAG_07014"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70348,70446,70476,70488,70503,70583,71200,71261,71402,71615,71773,71925,72002,72025,72099,72182,72285,72748,73058,73131,73140,73154,73228,73288,73751,73785,73877,73888,73891,73913,73950,74181,74213,74471,74477,74693,74856,75004,75083,75327,75563,75699,75833,75918,75938,76053,76444,76614,76914,76956,77161,77164,77184,77290,77662,77861,78417,78517,78521,78898,83860,86701,86702,86703,92639,92726,94689,97155,97156,103228,107445,107446,108729,108730,109135,109136,109685,109730,109731,112023,112542],"is_not":false,"summary":null,"term":"GO:0022625"}]},"cv_name":"cellular_component","definition":"The large subunit of a ribosome located in the cytosol.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit","termid":"GO:0015934"},{"relation_name":"part_of","term_name":"cytosolic ribosome","termid":"GO:0022626"}],"gene_count":81,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00384":null,"SJAG_00537":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01411":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01606":null,"SJAG_01608":null,"SJAG_01676":null,"SJAG_01721":null,"SJAG_01853":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02207":null,"SJAG_02243":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02510":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02755":null,"SJAG_02802":null,"SJAG_02840":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_03043":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03197":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03423":null,"SJAG_03425":null,"SJAG_03666":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04020":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04176":null,"SJAG_04304":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04847":null,"SJAG_04897":null,"SJAG_05216":null,"SJAG_05248":null,"SJAG_06612":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0022626"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0022626","GO:0005575"],"is_obsolete":false,"name":"cytosolic large ribosomal subunit","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0030872","GO:0009282","GO:0030498","GO:0005842"],"synonyms":[{"name":"50S ribosomal subunit","type":"narrow"},{"name":"60S ribosomal subunit","type":"narrow"},{"name":"eukaryotic ribosomal LSU","type":"narrow"},{"name":"prokaryotic large ribosomal subunit","type":"narrow"}],"termid":"GO:0022625","terms_by_termid":{"GO:0022625":null}}


id: PBO:0050947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 21","termid":"PBO:0050947"}


id: PBO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.2.2","termid":"PBO:0004215"}


id: PBO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 19, pseudogene","termid":"PBO:0070062"}


id: PBO:0052126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily E regulatory subunit 4","termid":"PBO:0052126"}


id: PBO:0012596
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae DIS2","termid":"PBO:0012596"}


id: PBO:0081921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 890, pseudogene","termid":"PBO:0081921"}


id: GO:0045561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 1.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor 1 biosynthetic process (obsolete GO:0045561)","synonyms":[{"name":"regulation of TRAIL receptor 1 anabolism","type":"exact"},{"name":"regulation of TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor 1 formation","type":"exact"},{"name":"regulation of TRAIL receptor 1 synthesis","type":"exact"}],"termid":"GO:0045561"}


id: PBO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 74","termid":"PBO:0071233"}


id: GO:1901695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tyramine.","definition_xrefs":["PMID:21284755","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tyramine biosynthetic process","synonyms":[{"name":"tyramine anabolism","type":"exact"},{"name":"tyramine biosynthesis","type":"exact"},{"name":"tyramine formation","type":"exact"},{"name":"tyramine synthesis","type":"exact"}],"termid":"GO:1901695"}


id: PBO:0079795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A3","termid":"PBO:0079795"}


id: PBO:0034173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_to_from_or_in","termid":"PBO:0034173"}


id: GO:0050223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + H+ = catechol + CO2.","definition_xrefs":["RHEA:22416","EC:4.1.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"protocatechuate decarboxylase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-DECARBOXYLASE-RXN","KEGG_REACTION:R00822"],"synonyms":[{"name":"3,4-dihydrobenzoate decarboxylase activity","type":"related"},{"name":"3,4-dihydroxybenzoate carboxy-lyase (catechol-forming)","type":"related"},{"name":"3,4-dihydroxybenzoate decarboxylase activity","type":"related"},{"name":"protocatechuate carboxy-lyase activity","type":"related"}],"termid":"GO:0050223"}


id: PBO:0028150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_macromolecular_complex","termid":"PBO:0028150"}


id: GO:0032413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ion transmembrane transporter activity","synonyms":[{"name":"down regulation of ion transporter activity","type":"exact"},{"name":"down-regulation of ion transporter activity","type":"exact"},{"name":"downregulation of ion transporter activity","type":"exact"},{"name":"inhibition of ion transporter activity","type":"narrow"},{"name":"negative regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032413"}


id: PBO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sep1","termid":"PBO:0000955"}


id: PBO:0082127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aconitase; required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy; mutation in human homolog ACO2 is associated with dominant optic nerve atrophy; human homolog ACO2 can complement yeast null mutant","termid":"PBO:0082127"}


id: PBO:0066567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid 5 homolog 2","termid":"PBO:0066567"}


id: PBO:0014593
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA Maintenance","termid":"PBO:0014593"}


id: PBO:0045161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 1","termid":"PBO:0045161"}


id: GO:0120166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing fruiting body precursors, called protoperithecia. Protoperitheicium is a spherical structure that is formed in the sexual phase of ascomycetous fungi such as Neurospora crassa and Sordaria macrospora. Protoperithecium is formed by the enveloping of ascogonia cells by sterile hyphae and it develops into perithecium.","definition_xrefs":["PMID:4410944","PMID:6235211","PMID:125266","PMID:6235212","PMID:25311923","DOI:10.1007/978-3-642-00286-1_2","PMID:20739093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoperithecium formation","termid":"GO:0120166"}


id: PR:000027623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC14-type phosphatase that is a translation product of the Schizosaccharomyces pombe 972h- clp1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PMID:16085489","PMID:18951025","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1","synonyms":[{"name":"CDC14","type":"related"},{"name":"clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14","type":"exact"}],"termid":"PR:000027623"}


id: RO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"transitive form of directly_provides_input_for","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitively_provides_input_for","termid":"RO:0002414"}


id: PBO:0081738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 669","termid":"PBO:0081738"}


id: PBO:0027666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_inner_repeat","termid":"PBO:0027666"}


id: PBO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14C small subunit processome component","termid":"PBO:0080103"}


id: FYPO:0003887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during a meiotic cell cycle. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"localization phenotype during meiotic cell cycle","termid":"FYPO:0006393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished endocytosis during meiotic cell cycle","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic cell cycle","type":"exact"},{"name":"abolished protein internalization during meiotic cell cycle","type":"narrow"},{"name":"absent endocytosis during meiotic cell cycle","type":"exact"},{"name":"endocytosis abolished during meiotic cell cycle","type":"exact"},{"name":"endocytosis: absent during meiotic cell cycle","type":"related"}],"termid":"FYPO:0003887"}


id: GO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"}


id: PBO:0063726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 1","termid":"PBO:0063726"}


id: GO:0034921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-4,5-dihydroxy-4,5-dihydropyrene = 4,5-dihydroxypyrene + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cis-4,5-dihydroxy-4,5-dihydropyrene dehydrogenase activity","termid":"GO:0034921"}


id: GO:0102939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methoxy-5-hydroxytoluene + S-adenosyl-L-methionine = H+ + 3,5-dimethoxytoluene + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-methoxy-5-hydroxytoluene O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9018"],"termid":"GO:0102939"}


id: GO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen bound to a cell surface pattern recognition receptor (PRR).","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation initiated by pattern recognition receptor mediated uptake of antigen","synonyms":[{"name":"antigen processing and presentation initiated by PAMP receptor mediated uptake of antigen","type":"exact"},{"name":"antigen processing and presentation initiated by PRR mediated uptake of antigen","type":"exact"}],"termid":"GO:0002748"}


id: PBO:0053138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A","termid":"PBO:0053138"}


id: PBO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1586","termid":"PBO:0052327"}


id: PR:O13783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A programmed cell death 6-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein-sorting protein bro1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.05c","secondary_identifiers":["UniProtKB:O13783"],"synonyms":[{"name":"BRO domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC17G6.05c","type":"related"},{"name":"Spom972h-PDCD6IP","type":"exact"}],"termid":"PR:O13783"}


id: GO:0045597
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_02392","SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85585,90187,91428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[97745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[86426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell differentiation","type":"narrow"},{"name":"stimulation of cell differentiation","type":"narrow"},{"name":"up regulation of cell differentiation","type":"exact"},{"name":"up-regulation of cell differentiation","type":"exact"},{"name":"upregulation of cell differentiation","type":"exact"}],"termid":"GO:0045597","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: PR:Q9C0Z4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB21F2.02 gene.","definition_xrefs":["UniProtKB:Q9C0Z4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein dopey (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB21F2.02","synonyms":[{"name":"Spom972h-SPAPB21F2.02","type":"exact"}],"termid":"PR:Q9C0Z4"}


id: SO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a fusion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"fusion","termid":"SO:0000806"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion_gene","secondary_identifiers":["http://en.wikipedia.org/wiki/Fusion_gene"],"synonyms":[{"name":"fusion gene","type":"exact"}],"termid":"SO:0000287"}


id: PBO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 1","termid":"PBO:0046453"}


id: PBO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_soma_location","termid":"PBO:0034346"}


id: GO:0031730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR5 chemokine receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR5 chemokine receptor binding","synonyms":[{"name":"CCR5 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0031730"}


id: PBO:0059211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA methyltransferase 3","termid":"PBO:0059211"}


id: PBO:0000520
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low complexity gene free region","termid":"PBO:0000520"}


id: PBO:0061434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group I member 3","termid":"PBO:0061434"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: GO:0047492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xanthan = oligosaccharide with 4-deoxy-alpha-L-threo-hex-4-enuronosyl end + pyruvylate mannose. This reaction is the eliminative cleavage of the terminal beta-D-mannosyl-beta-D-1,4-glucuronosyl linkage of the side-chain of the polysaccharide xanthan, leaving a 4-deoxy-alpha-L-threo-hex-4-enuronosyl group at the terminus of the side-chain.","definition_xrefs":["EC:4.2.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"xanthan lyase activity","secondary_identifiers":["MetaCyc:4.2.2.12-RXN"],"termid":"GO:0047492"}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["EC:1.13.11.55","PMID:1522063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["RHEA:13957","MetaCyc:1.13.11.55-RXN"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: GO:0000947
data:
  {"annotated_genes":["SJAG_02734","SJAG_04842","SJAG_03743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73529,71738,71284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000947","terms_by_termid":{"GO:0000949":null}}


id: GO:0019250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12) in the presence of oxygen.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobalamin biosynthetic process","termid":"GO:0009236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766","GO:0033013"],"is_obsolete":false,"name":"aerobic cobalamin biosynthetic process","secondary_identifiers":["MetaCyc:P381-PWY"],"synonyms":[{"name":"aerobic cobalamin anabolism","type":"exact"},{"name":"aerobic cobalamin biosynthesis","type":"exact"},{"name":"aerobic cobalamin formation","type":"exact"},{"name":"aerobic cobalamin synthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthesis","type":"exact"},{"name":"aerobic vitamin B12 biosynthetic process","type":"exact"},{"name":"cobalamin biosynthesis, aerobic","type":"exact"},{"name":"cobalamin biosynthetic process, aerobic","type":"exact"},{"name":"vitamin B12 biosynthesis, aerobic","type":"exact"},{"name":"vitamin B12 biosynthetic process, aerobic","type":"exact"}],"termid":"GO:0019250"}


id: FYPO:0000328
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114158,114162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114653],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[114152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects protein metabolism in the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal protein metabolic process","termid":"FYPO:0002274"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":5,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein metabolic process during vegetative growth","references_by_uniquename":{"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_04697","SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta","gms1delta","pck2delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cellular protein metabolic process during vegetative growth","type":"exact"},{"name":"abnormal protein metabolic process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000328","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: GO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxy)phenylpropionate metabolic process","synonyms":[{"name":"3-(3-hydroxy)phenylpropionate metabolism","type":"exact"}],"termid":"GO:0046435"}


id: GO:0009848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole-3-acetic acid that occurs through metabolism of L-tryptophan.","definition_xrefs":["GOC:lm","GOC:lr","PMID:10375566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"indoleacetic acid biosynthetic process","termid":"GO:0009684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"indoleacetic acid biosynthetic process via tryptophan","secondary_identifiers":["MetaCyc:PWY-581"],"synonyms":[{"name":"IAA biosynthetic process via tryptophan","type":"exact"},{"name":"indoleacetic acid anabolism via tryptophan","type":"exact"},{"name":"indoleacetic acid formation via tryptophan","type":"exact"},{"name":"indoleacetic acid synthesis via tryptophan","type":"exact"}],"termid":"GO:0009848"}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: SO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose association with a trait is based on the gene's location on a chromosome.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positional_candidate_gene","synonyms":[{"name":"positional candidate gene","type":"exact"},{"name":"positional target gene","type":"related"}],"termid":"SO:0001868"}


id: PBO:0071604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 21","termid":"PBO:0071604"}


id: PBO:0109614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitic acid regulated anti-inflammatory lncRNA","termid":"PBO:0109614"}


id: PBO:0048228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate decarboxylase like 1","termid":"PBO:0048228"}


id: PBO:0073850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3 3' UTR overlapping transcript 1","termid":"PBO:0073850"}


id: PBO:0088220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLLLP motif protein","termid":"PBO:0088220"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: PBO:0072928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 9","termid":"PBO:0072928"}


id: PBO:0041109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 2","termid":"PBO:0041109"}


id: GO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin silencing complex that binds and bridges separate nucleosomal histones resulting in heterochromatin assembly and chromatin looping.","definition_xrefs":["GOC:bhm","GOC:dph","PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin silencing complex","termid":"GO:0005677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chromatin lock complex","synonyms":[{"name":"nucleosome bridging complex","type":"related"}],"termid":"GO:0061793"}


id: PBO:0030421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sterol_binding","termid":"PBO:0030421"}


id: GO:0030759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone + S-adenosyl-L-methionine(1+) = 3',4',5-trihydroxy-3,6,7-trimethoxyflavone + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18717","EC:2.1.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylquercetagetin 6-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04505","MetaCyc:2.1.1.84-RXN"],"synonyms":[{"name":"6-OMT","type":"related"},{"name":"S-adenosyl-L-methionine:3',4',5,6-tetrahydroxy-3,7-dimethoxyflavone 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-O-methyltransferase activity","type":"related"},{"name":"flavonol 6-methyltransferase activity","type":"related"}],"termid":"GO:0030759"}


id: FYECO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using carbendazim (MBC) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBC block and release","termid":"FYECO:0000365"}


id: PBO:0090576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23","termid":"PBO:0090576"}


id: GO:0031713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a B2 bradykinin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bradykinin receptor binding","termid":"GO:0031711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"B2 bradykinin receptor binding","synonyms":[{"name":"B2 bradykinin receptor ligand","type":"narrow"}],"termid":"GO:0031713"}


id: PBO:0087621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the COP9 signalosome (CSN) complex; this complex cleaves the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; plays a role in the mating pheromone response","termid":"PBO:0087621"}


id: MOD:01318
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:12422359","PubMed:12216740","PubMed:11510821","Unimod:178#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation to amine thiol","termid":"MOD:00535"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol - site S","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:01318"}


id: GO:0032241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleobase-containing compound transport","synonyms":[{"name":"activation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"narrow"},{"name":"positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"},{"name":"stimulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"narrow"},{"name":"up regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"up-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"upregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"}],"termid":"GO:0032241"}


id: PBO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 3","termid":"PBO:0050093"}


id: GO:1901296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003308"},{"relation_name":"is_a","term_name":"negative regulation of canonical Wnt signaling pathway","termid":"GO:0090090"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:1901295"},{"relation_name":"negatively_regulates","term_name":"canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","termid":"GO:0061317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment","synonyms":[{"name":"down regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"down-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"downregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"inhibition of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"inhibition of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901296"}


id: GO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex, located in the plasma membrane-derived thylakoid, containing either both large and small subunits or just small subunits. It carries out the activity of producing 3-phosphoglycerate from carbon dioxide and ribulose-1,5-bisphosphate.","definition_xrefs":["GOC:mtg_sensu","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatophore ribulose bisphosphate carboxylase complex","termid":"GO:0048494"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex","synonyms":[{"name":"RubisCO complex","type":"broad"},{"name":"plasma membrane ribulose bisphosphate carboxylase complex","type":"exact"},{"name":"ribulose bisphosphate carboxylase complex","type":"broad"}],"termid":"GO:0048493"}


id: GO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2O = ADP-D-ribose-2-phosphate + nicotinamide.","definition_xrefs":["RHEA:19849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"NADP+ nucleosidase activity","secondary_identifiers":["Reactome:R-HSA-9637699"],"synonyms":[{"name":"NAD(P)+ nucleosidase activity","type":"broad"},{"name":"NADP nucleosidase activity","type":"exact"},{"name":"NADP(+) nucleosidase activity","type":"exact"},{"name":"NADP+ glycohydrolase activity","type":"related"},{"name":"NADPase activity","type":"related"}],"termid":"GO:0050135"}


id: GO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter development","termid":"GO:0072189"}


id: GO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta T cell. An alpha-beta T cell is a T cell that expresses an alpha-beta T cell receptor complex.","definition_xrefs":["GOC:ai","CL:0000789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation","synonyms":[{"name":"alpha-beta T cell development","type":"related"},{"name":"alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta T-cell differentiation","type":"exact"},{"name":"alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046632"}


id: PBO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein kinase beta subunit Amk2","termid":"PBO:0005799"}


id: PBO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1212 family protein","termid":"PBO:0001639"}


id: PBO:0069564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 836, pseudogene","termid":"PBO:0069564"}


id: PBO:0088432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex associated ATPase Bud32","termid":"PBO:0088432"}


id: PBO:0080397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26C pseudogene 1","termid":"PBO:0080397"}


id: PBO:0070273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 8","termid":"PBO:0070273"}


id: PR:O94599
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.11 gene.","definition_xrefs":["UniProtKB:O94599","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMR family protein C622.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.11","synonyms":[{"name":"Spom972h-SPCC622.11","type":"exact"}],"termid":"PR:O94599"}


id: FYPO:0005660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of crossover associated with a gene conversion event during meiotic recombination is decreased.","definition_xrefs":["PomBase:mah","PMID:25414342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal frequency of meiotic crossover associated with gene conversion","termid":"FYPO:0005658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased frequency of meiotic crossover associated with gene conversion","synonyms":[{"name":"decreased levels of meiotic crossover associated with a gene conversion event","type":"exact"},{"name":"reduced frequency of meiotic crossover associated with gene conversion","type":"exact"}],"termid":"FYPO:0005660"}


id: PBO:0068571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 22, pseudogene","termid":"PBO:0068571"}


id: PBO:0040719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL9 like","termid":"PBO:0040719"}


id: GO:2001302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"lipoxin A4 metabolic process","synonyms":[{"name":"LXA4 metabolic process","type":"exact"},{"name":"LXA4 metabolism","type":"exact"},{"name":"lipoxin A4 metabolism","type":"exact"}],"termid":"GO:2001302"}


id: GO:0032622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-19 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-19 production","secondary_identifiers":["GO:0042236","GO:0072617"],"synonyms":[{"name":"IL-19 production","type":"exact"},{"name":"IL-19 secretion","type":"narrow"},{"name":"ZMDA1 secretion","type":"narrow"},{"name":"interleukin-19 biosynthetic process","type":"narrow"},{"name":"interleukin-19 secretion","type":"narrow"}],"termid":"GO:0032622"}


id: GO:0075186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont infection cushion formation on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of infection cushion formation","termid":"GO:0075184"},{"relation_name":"negatively_regulates","term_name":"infection cushion formation","termid":"GO:0075183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of infection cushion formation","synonyms":[{"name":"negative regulation of infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075186"}


id: PBO:0073102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 6","termid":"PBO:0073102"}


id: GO:0047334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fructose-6-phosphate + diphosphate = phosphate + fructose-1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.90","MetaCyc:2.7.1.90-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"diphosphate-fructose-6-phosphate 1-phosphotransferase activity","secondary_identifiers":["RHEA:13613"],"synonyms":[{"name":"6-phosphofructokinase (diphosphate) activity","type":"related"},{"name":"6-phosphofructokinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate-dependent 6-phosphofructose-1-kinase activity","type":"related"},{"name":"diphosphate:D-fructose-6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"inorganic pyrophosphate-dependent phosphofructokinase activity","type":"related"},{"name":"inorganic pyrophosphate-phosphofructokinase activity","type":"related"},{"name":"pyrophosphate--fructose 6-phosphate 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate-dependent 6-phosphofructose-1-kinase activity","type":"related"},{"name":"pyrophosphate-dependent phosphofructo-1-kinase activity","type":"related"},{"name":"pyrophosphate-fructose 6-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047334"}


id: PBO:0030163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylserine_level","termid":"PBO:0030163"}


id: PR:Q9UTA4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleases P/MRP protein subunit POP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22731:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P/MRP protein subunit pop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.16","secondary_identifiers":["UniProtKB:Q9UTA4"],"synonyms":[{"name":"SPAC25B8.16","type":"related"},{"name":"Spom972h-POP1","type":"exact"}],"termid":"PR:Q9UTA4"}


id: PBO:0041703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 1 pseudogene 1","termid":"PBO:0041703"}


id: GO:0140323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion(in) + solute(out) = anion(out) + solute(in).","definition_xrefs":["GOC:pg"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:monoatomic anion antiporter activity (obsolete GO:0140323)","synonyms":[{"name":"solute:anion antiporter activity","type":"exact"}],"termid":"GO:0140323"}


id: PBO:0044316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-245 beta chain","termid":"PBO:0044316"}


id: GO:2000245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Ftsz-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"regulation of FtsZ-dependent cytokinesis","termid":"GO:2000244"},{"relation_name":"negatively_regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"negative regulation of prokaryote-type cytokinesis","type":"related"},{"name":"negative regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000245"}


id: PBO:0050469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA distal transcript antisense RNA","termid":"PBO:0050469"}


id: PBO:0080688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt ligand secretion mediator","termid":"PBO:0080688"}


id: PBO:0086408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative glycoside hydrolase of the mitochondrial intermembrane space","termid":"PBO:0086408"}


id: FYPO:0007595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitophagy, i.e. autophagic degradation of the mitochondria, is increased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mitophagy","termid":"FYPO:0000501"},{"relation_name":"is_a","term_name":"abnormal mitophagy during nitrogen starvation","termid":"FYPO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitophagy during nitrogen starvation","synonyms":[{"name":"increased autophagy of mitochondrion during nitrogen depletion","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen deprivation","type":"exact"},{"name":"increased autophagy of mitochondrion during nitrogen starvation","type":"exact"}],"termid":"FYPO:0007595"}


id: PR:Q9USP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI-anchor transamidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04689","PANTHER:PTHR12000:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchor transamidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.02c","secondary_identifiers":["UniProtKB:Q9USP5"],"synonyms":[{"name":"GPI transamidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PIGK","type":"exact"}],"termid":"PR:Q9USP5"}


id: PBO:0079997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 35","termid":"PBO:0079997"}


id: PBO:0082680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; suppressor of rna1-1 mutation; may be involved in RNA export from nucleus","termid":"PBO:0082680"}


id: GO:0031941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A two-stranded helical polymer of the protein actin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin filament","termid":"GO:0005884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"filamentous actin","secondary_identifiers":["Wikipedia:Actin"],"synonyms":[{"name":"F-actin","type":"exact"}],"termid":"GO:0031941"}


id: PBO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 1","termid":"PBO:0052583"}


id: PBO:0081939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger HIT-type containing 2","termid":"PBO:0081939"}


id: GO:0010473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-L-galactose + myo-inositol 1-phosphate = alpha-L-galactose-1-phosphate + GDP-myoinositol.","definition_xrefs":["PMID:17485667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity","termid":"GO:0010473"}


id: PBO:0088120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Fe2+/Mn2+ transporter; suppresses respiratory deficit of yfh1 mutants, which lack the ortholog of mammalian frataxin, by preventing mitochondrial iron accumulation; relative distribution to the vacuole decreases upon DNA replication stress","termid":"PBO:0088120"}


id: PBO:0052687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRT10 antisense RNA 1","termid":"PBO:0052687"}


id: GO:0051777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-kaurenoate + NADPH + O2 = ent-7-alpha-hydroxykaurenoate + NADP+ + H2O. This is the first of three successive reactions resulting in the oxidation of ent-kaurenoate (ent-kaurenoic acid) to gibberellin 12 (GA12).","definition_xrefs":["EC:1.14.13.79","MetaCyc:RXN1F-159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ent-kaurenoate oxidase activity","secondary_identifiers":["MetaCyc:1.14.13.79-RXN","RHEA:19241"],"synonyms":[{"name":"ent-kaur-16-en-19-oate,NADPH:oxygen oxidoreductase (hydroxylating) activity","type":"related"},{"name":"ent-kaurenoic acid oxidase activity","type":"exact"}],"termid":"GO:0051777"}


id: PBO:0064841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B pseudogene 1","termid":"PBO:0064841"}


id: PBO:0090490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssa-like","termid":"PBO:0090490"}


id: GO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular synthesis of microRNA (miRNA) transcripts. MicroRNA genes are synthesized as primary (pri) miRNA transcripts and subsequently processed to produce the ~22nt miRNAs that function in gene regulation.","definition_xrefs":["GOC:kmv","PMID:18778799","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA metabolic process","termid":"GO:0010586"},{"relation_name":"is_a","term_name":"ncRNA transcription","termid":"GO:0098781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA transcription","synonyms":[{"name":"miRNA gene transcription","type":"exact"},{"name":"microRNA gene transcription","type":"exact"},{"name":"pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"primary miRNA gene transcription","type":"exact"}],"termid":"GO:0061614"}


id: PBO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA","termid":"PBO:0002184"}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: GO:0032141
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93722],"is_not":false,"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single cytosine insertion or a deletion that results in an unpaired cytosine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"single cytosine insertion binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032141","terms_by_termid":{"GO:0032141":null}}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: GO:0048827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a phyllome over time, from its formation to the mature structure. A phyllome is a collective term for all the different types of leaves appearing on plants.","definition_xrefs":["GOC:tb","GOC:devbiol","PO:0006001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phyllome development","termid":"GO:0048827"}


id: PBO:0082629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis","termid":"PBO:0082629"}


id: PBO:0031442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_vegetative_growth","termid":"PBO:0031442"}


id: PBO:0056283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase beta like","termid":"PBO:0056283"}


id: GO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole acetic acid + S-adenosyl-methionine = methyl indole acetic acid ester + S-adenosyl-homocysteine.","definition_xrefs":["PMID:16169896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole acetic acid carboxyl methyltransferase activity","synonyms":[{"name":"IAA carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0051749"}


id: PBO:0085912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may interact with ribosomes, based on co-purification experiments; similar to transcriptional regulators from the zinc cluster (binuclear cluster) family; null mutant is sensitive to caffeine","termid":"PBO:0085912"}


id: GO:0015284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).","definition_xrefs":["TC:2.A.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose uniporter activity","termid":"GO:0015284"}


id: PBO:0084844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth","termid":"PBO:0084844"}


id: PBO:0109120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase Hhy1","termid":"PBO:0109120"}


id: PR:O13921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msh1 gene.","definition_xrefs":["UniProtKB:O13921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutS protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.01c","synonyms":[{"name":"Spom972h-msh1","type":"exact"}],"termid":"PR:O13921"}


id: GO:0032335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of activin secretion","termid":"GO:0032335"}


id: GO:0036280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus. L-canavanine is L-homoserine substituted at oxygen with a guanidino (carbamimidamido) group.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-canavanine","termid":"GO:1901354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-canavanine","termid":"GO:0036280"}


id: GO:1901062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guaiacyl lignin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"},{"relation_name":"is_a","term_name":"guaiacyl lignin metabolic process","termid":"GO:1901061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"guaiacyl lignin catabolic process","synonyms":[{"name":"G-lignin catabolic process","type":"exact"},{"name":"guaiacyl lignin breakdown","type":"exact"},{"name":"guaiacyl lignin catabolism","type":"exact"},{"name":"guaiacyl lignin degradation","type":"exact"}],"termid":"GO:1901062"}


id: GO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized.","definition_xrefs":["ISBN:0140512888","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"},{"relation_name":"part_of","term_name":"male genitalia development","termid":"GO:0030539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"related"}],"termid":"GO:0048808"}


id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: PBO:0036551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary septum 1,6 branched 1,3-beta-glucan synthase catalytic subunit Bgs4","termid":"PBO:0036551"}


id: GO:1900126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of nitrogen compound metabolic process","termid":"GO:0051172"},{"relation_name":"is_a","term_name":"regulation of hyaluronan biosynthetic process","termid":"GO:1900125"},{"relation_name":"negatively_regulates","term_name":"hyaluronan biosynthetic process","termid":"GO:0030213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of hyaluronan biosynthetic process","synonyms":[{"name":"down regulation of hyaluronan anabolism","type":"exact"},{"name":"down regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down regulation of hyaluronan formation","type":"exact"},{"name":"down regulation of hyaluronan synthesis","type":"exact"},{"name":"down-regulation of hyaluronan anabolism","type":"exact"},{"name":"down-regulation of hyaluronan biosynthesis","type":"exact"},{"name":"down-regulation of hyaluronan biosynthetic process","type":"exact"},{"name":"down-regulation of hyaluronan formation","type":"exact"},{"name":"down-regulation of hyaluronan synthesis","type":"exact"},{"name":"downregulation of hyaluronan anabolism","type":"exact"},{"name":"downregulation of hyaluronan biosynthesis","type":"exact"},{"name":"downregulation of hyaluronan biosynthetic process","type":"exact"},{"name":"downregulation of hyaluronan formation","type":"exact"},{"name":"downregulation of hyaluronan synthesis","type":"exact"},{"name":"inhibition of hyaluronan anabolism","type":"exact"},{"name":"inhibition of hyaluronan biosynthesis","type":"exact"},{"name":"inhibition of hyaluronan biosynthetic process","type":"narrow"},{"name":"inhibition of hyaluronan formation","type":"exact"},{"name":"inhibition of hyaluronan synthesis","type":"exact"},{"name":"negative regulation of hyaluronan anabolism","type":"exact"},{"name":"negative regulation of hyaluronan biosynthesis","type":"exact"},{"name":"negative regulation of hyaluronan formation","type":"exact"},{"name":"negative regulation of hyaluronan synthesis","type":"exact"}],"termid":"GO:1900126"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: PBO:0058831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8061","termid":"PBO:0058831"}


id: GO:2000935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellotriose metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellotriose metabolic process","termid":"GO:2000933"},{"relation_name":"positively_regulates","term_name":"cellotriose metabolic process","termid":"GO:2000893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellotriose metabolic process","synonyms":[{"name":"positive regulation of cellotriose metabolism","type":"exact"}],"termid":"GO:2000935"}


id: GO:0097753
data:
  {"annotated_genes":["SJAG_03795","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114391,114397],"is_not":false,"summary":null,"term":"GO:0097753"}]},"cv_name":"biological_process","definition":"A membrane organization process resulting in the bending of a membrane.","definition_xrefs":["GOC:krc","Wikipedia:Membrane_curvature","GOC:vw","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane bending","references_by_uniquename":{"PMID:33495454":null},"synonyms":[{"name":"membrane curvature","type":"related"}],"termid":"GO:0097753","terms_by_termid":{"GO:0097753":null}}


id: PBO:0040186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginase and isoaspartyl peptidase 1","termid":"PBO:0040186"}


id: PBO:0075801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 like 2 pseudogene 2","termid":"PBO:0075801"}


id: GO:0030955
data:
  {"annotated_genes":["SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93811],"is_not":false,"summary":null,"term":"GO:0030955"}]},"cv_name":"molecular_function","definition":"Binding to a potassium ion (K+).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkali metal ion binding","termid":"GO:0031420"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"potassium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"K ion binding","type":"exact"}],"termid":"GO:0030955","terms_by_termid":{"GO:0030955":null}}


id: PBO:0053249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 3","termid":"PBO:0053249"}


id: GO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CHO + reduced FMN + O2 = R-COOH + FMN + H2O + light.","definition_xrefs":["EC:1.14.14.3","MetaCyc:ALKANAL-MONOOXYGENASE-FMN-LINKED-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkanal monooxygenase (FMN-linked) activity","secondary_identifiers":["RHEA:17181"],"synonyms":[{"name":"aldehyde monooxygenase activity","type":"broad"},{"name":"alkanal,reduced-FMN:oxygen oxidoreductase (1-hydroxylating, luminescing)","type":"related"},{"name":"bacterial luciferase activity","type":"related"},{"name":"vibrio fischeri luciferase activity","type":"related"}],"termid":"GO:0047646"}


id: GO:0006618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the signal peptide from a nascent protein during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal peptide processing","termid":"GO:0006465"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0006605","GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, signal sequence processing","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, signal sequence processing","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, signal sequence processing","type":"exact"},{"name":"signal sequence processing during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006618"}


id: PBO:0080937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY2 transcription factor","termid":"PBO:0080937"}


id: GO:0030465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete autophagic death (sensu Fungi) (obsolete GO:0030465)","synonyms":[{"name":"autophagic death (sensu Fungi)","type":"exact"}],"termid":"GO:0030465"}


id: PBO:0052037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumping translocation breakpoint pseudogene 1","termid":"PBO:0052037"}


id: PBO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 35","termid":"PBO:0060088"}


id: GO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the proliferation of neuroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of neuroblast proliferation","termid":"GO:1902692"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast proliferation","synonyms":[{"name":"down regulation of neuroblast proliferation","type":"exact"},{"name":"down-regulation of neuroblast proliferation","type":"exact"},{"name":"downregulation of neuroblast proliferation","type":"exact"},{"name":"inhibition of neuroblast proliferation","type":"narrow"},{"name":"suppression of neuroblast proliferation","type":"exact"}],"termid":"GO:0007406"}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: PBO:0067638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 811, pseudogene","termid":"PBO:0067638"}


id: GO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis on or near host (obsolete GO:0052145)","termid":"GO:0052145"}


id: PBO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase (predicted)","termid":"PBO:0000950"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: PBO:0062796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL1 pseudogene 1","termid":"PBO:0062796"}


id: SO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chloroplast, a photosynthetic plastid.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"chloroplast_sequence","termid":"SO:0000745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA","synonyms":[{"name":"chloroplast DNA","type":"exact"}],"termid":"SO:0001033"}


id: GO:0036225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of vitamin B1 (also called thiamin and thiamine).","definition_xrefs":["GOC:al","Wikipedia:Thiamine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1 starvation","synonyms":[{"name":"cellular response to thiamin starvation","type":"exact"},{"name":"cellular response to vitamin B1 deprivation","type":"exact"}],"termid":"GO:0036225"}


id: PBO:0011450
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.55","termid":"PBO:0011450"}


id: GO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"very long-chain fatty acid catabolic process","synonyms":[{"name":"very-long-chain fatty acid breakdown","type":"exact"},{"name":"very-long-chain fatty acid catabolic process","type":"exact"},{"name":"very-long-chain fatty acid catabolism","type":"exact"},{"name":"very-long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042760"}


id: PBO:0070018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1315, pseudogene","termid":"PBO:0070018"}


id: GO:0060170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a cilium.","definition_xrefs":["GOC:cilia","GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary membrane","secondary_identifiers":["GO:0020017"],"synonyms":[{"name":"cilial membrane","type":"exact"},{"name":"cilium membrane","type":"exact"},{"name":"flagellar membrane","type":"narrow"},{"name":"flagellum membrane","type":"narrow"}],"termid":"GO:0060170"}


id: GO:0046779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that discriminates against and subsequently inhibits host transcripts containing introns, thus allowing only intronless viral mRNA to be fully processed.","definition_xrefs":["PMID:11598019"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of expression of host genes with introns (obsolete GO:0046779)","synonyms":[{"name":"negative regulation by virus of expression of host genes with introns","type":"exact"},{"name":"viral inhibition of expression of host genes with introns","type":"exact"}],"termid":"GO:0046779"}


id: PBO:0050080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1","termid":"PBO:0050080"}


id: GO:0009753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid","synonyms":[{"name":"response to jasmonic acid stimulus","type":"exact"}],"termid":"GO:0009753"}


id: PBO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 6","termid":"PBO:0060709"}


id: PBO:0080435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 19","termid":"PBO:0080435"}


id: GO:0032332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"positive regulation of cartilage development","termid":"GO:0061036"},{"relation_name":"positively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte differentiation","synonyms":[{"name":"activation of chondrocyte differentiation","type":"narrow"},{"name":"stimulation of chondrocyte differentiation","type":"narrow"},{"name":"up regulation of chondrocyte differentiation","type":"exact"},{"name":"up-regulation of chondrocyte differentiation","type":"exact"},{"name":"upregulation of chondrocyte differentiation","type":"exact"}],"termid":"GO:0032332"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: PBO:0030127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_molybdenum_level","termid":"PBO:0030127"}


id: PBO:0056114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYPLAL1 antisense RNA 1","termid":"PBO:0056114"}


id: PBO:0087510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric peroxisomal ABC transport complex, with Pxa1p; required for import of long-chain fatty acids into peroxisomes; similar to human adrenoleukodystrophy transportesr ABCD1 and ABCD2, and ALD-related proteins; mutations in ABCD1 cause X-linked adrenoleukodystrophy (X-ALD), a peroxisomal disorder; human ABCD1 and ABCD2 can each partially complement yeast pxa1 pxa2 double null mutant","termid":"PBO:0087510"}


id: GO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contribute to the progression of the metanephric kidney over time. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in metanephric kidney development (obsolete GO:0061290)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in metanephric kidney development","type":"exact"}],"termid":"GO:0061290"}


id: PBO:0068045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 350","termid":"PBO:0068045"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: GO:1905308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26108447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to miconazole","termid":"GO:1905307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to miconazole","termid":"GO:1905308"}


id: PBO:0011058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_in","termid":"PBO:0011058"}


id: GO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD24, a CD marker and cell adhesion molecule that occurs on many B-lineage cells and mature granulocytes, and is involved in B cell activation and differentiation as well as T cell co-stimulation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD24 biosynthetic process","synonyms":[{"name":"CD24 anabolism","type":"exact"},{"name":"CD24 biosynthesis","type":"exact"},{"name":"CD24 formation","type":"exact"},{"name":"CD24 synthesis","type":"exact"}],"termid":"GO:0035724"}


id: GO:0120043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle.","definition_xrefs":["GOC:krc","PMID:20170899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium shaft","termid":"GO:0120043"}


id: PBO:0056483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrin 3","termid":"PBO:0056483"}


id: PATO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000268 absolute visual threshold (obsolete PATO:0000268)","termid":"PATO:0000268"}


id: GO:0030061
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial inner membrane","termid":"GO:0005743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial crista","secondary_identifiers":["NIF_Subcellular:sao333328131"],"synonyms":[{"name":"cristae","type":"broad"},{"name":"mitochondrial cristae","type":"exact"}],"termid":"GO:0030061"}


id: PBO:0085378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane-associated protein phosphatase; involved in the general stress response and the inactivating dephosphorylation of Mep2p; required along with binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through Msn2p dephosphorylation, and for inhibition of TORC1 in response to limiting amino acids; regulates the sodium ion stress response with Psr2p; member of the HAD family of protein phosphatases","termid":"PBO:0085378"}


id: GO:0070513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a death domain of a protein. The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD bind each other forming oligomers. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB.","definition_xrefs":["GOC:rl","Pfam:PF00531","InterPro:IPR000488","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"death domain binding","termid":"GO:0070513"}


id: PBO:0065660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRJ antisense RNA 1","termid":"PBO:0065660"}


id: PBO:0055081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2499","termid":"PBO:0055081"}


id: PBO:0053065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large tumor suppressor kinase 2","termid":"PBO:0053065"}


id: GO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.","definition_xrefs":["EC:2.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"cyclopropane-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["MetaCyc:2.1.1.79-RXN","RHEA:11988"],"synonyms":[{"name":"CFA synthase activity","type":"related"},{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (cyclizing)","type":"related"},{"name":"cyclopropane fatty acid synthase activity","type":"related"},{"name":"cyclopropane fatty acid synthetase activity","type":"related"},{"name":"cyclopropane synthase activity","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0008825"}


id: FYPO:0005925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during mitosis","synonyms":[{"name":"normal protein accumulation during mitosis","type":"related"},{"name":"normal protein level during mitosis during vegetative growth","type":"exact"},{"name":"normal protein level during mitotic M phase","type":"related"},{"name":"normal protein level during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005925"}


id: GO:0050233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + O2 = 2-dehydro-D-glucose + H2O2.","definition_xrefs":["EC:1.1.3.10","RHEA:10552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyranose oxidase activity","secondary_identifiers":["KEGG_REACTION:R00302","MetaCyc:PYRANOSE-OXIDASE-RXN"],"synonyms":[{"name":"glucose 2-oxidase activity","type":"related"},{"name":"pyranose-2-oxidase activity","type":"related"},{"name":"pyranose:oxygen 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050233"}


id: GO:0070420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonhomologous end joining complex that contains one or more Ku monomers and one or more DNA ligase molecules from the LigC or LigD family, and mediates nonhomologous end joining in bacteria.","definition_xrefs":["GOC:mah","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonhomologous end joining complex","termid":"GO:0070419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Ku-DNA ligase complex","termid":"GO:0070420"}


id: GO:0035884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["GOC:rs","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"arabinan metabolic process","termid":"GO:0031221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan biosynthetic process","termid":"GO:0035884"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["PMID:16482511","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:0045379","GO:1905077"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0069249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 504, pseudogene","termid":"PBO:0069249"}


id: PBO:0061186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Ser (TGA) 1-1","termid":"PBO:0061186"}


id: PR:O59722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fab1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 3-phosphate 5-kinase fab1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.01","synonyms":[{"name":"PIPkin-III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fab1","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphatidylinositol 3-phosphate 5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type III PIP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59722"}


id: PBO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine family member 9","termid":"PBO:0043819"}


id: PBO:0027584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ferrozine","termid":"PBO:0027584"}


id: PBO:0063768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 1","termid":"PBO:0063768"}


id: PBO:0004127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Usp (universal stress protein) family protein","termid":"PBO:0004127"}


id: GO:0033016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a rhoptry.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"rhoptry","termid":"GO:0020008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rhoptry membrane","termid":"GO:0033016"}


id: PBO:0069389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 649, pseudogene","termid":"PBO:0069389"}


id: PBO:0024876
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Xenopus XMog1","termid":"PBO:0024876"}


id: PBO:0064727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 63","termid":"PBO:0064727"}


id: GO:0007158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a neuron to another cell via adhesion molecules.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"neuron cell-cell adhesion","synonyms":[{"name":"neuron adhesion","type":"exact"},{"name":"neuronal cell adhesion","type":"exact"}],"termid":"GO:0007158"}


id: PBO:0059646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 12","termid":"PBO:0059646"}


id: GO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A lipid modification process in which a steroid ester is formed by the combination of a carboxylic acid (often a fatty acid) and a steroid molecule (e.g. cholesterol).","definition_xrefs":["GOC:mah","GOC:rl","GOC:pde","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete steroid esterification (obsolete GO:0034433)","termid":"GO:0034433"}


id: PBO:0091396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6","termid":"PBO:0091396"}


id: PBO:0054804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2217","termid":"PBO:0054804"}


id: PBO:0078525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16","termid":"PBO:0078525"}


id: GO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + dTDP-4-amino-4,6-dideoxy-D-galactose = L-glutamate + dTDP-4-dehydro-6-deoxy-D-galactose.","definition_xrefs":["EC:2.6.1.59","RHEA:10368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxygalactose transaminase activity","secondary_identifiers":["MetaCyc:RFFTRANS-RXN","KEGG_REACTION:R04438"],"synonyms":[{"name":"dTDP-4,6-dideoxy-D-galactose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxygalactose aminotransferase activity","type":"related"},{"name":"dTDP-fucosamine aminotransferase activity","type":"exact"},{"name":"thymidine diphosphate 4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphosphoaminodideoxygalactose aminotransferase activity","type":"related"}],"termid":"GO:0019180"}


id: PBO:0059047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MN1 proto-oncogene, transcriptional regulator","termid":"PBO:0059047"}


id: PBO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 5","termid":"PBO:0045872"}


id: GO:1990785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of water immersion while being held immobile.","definition_xrefs":["PMID:10882227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water-immersion restraint stress","synonyms":[{"name":"response to immobilization stress combined with water immersion","type":"exact"}],"termid":"GO:1990785"}


id: PBO:0071288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 11","termid":"PBO:0071288"}


id: PBO:0070733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 3","termid":"PBO:0070733"}


id: GO:0016355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete DDT susceptibility/resistance (obsolete GO:0016355)","synonyms":[{"name":"DDT susceptibility/resistance","type":"exact"}],"termid":"GO:0016355"}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: PBO:0039187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 17B, pseudogene","termid":"PBO:0039187"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: PBO:0072473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 2","termid":"PBO:0072473"}


id: GO:0047936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H.","definition_xrefs":["EC:1.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose dehydrogenase activity","termid":"GO:0004344"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase [NAD(P)] activity","secondary_identifiers":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-glucose dehydrogenase (NAD(P))","type":"related"},{"name":"beta-D-glucose:NAD(P)+ 1-oxidoreductase activity","type":"related"},{"name":"hexose phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0047936"}


id: FYPO:0003692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"increased protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during oxidative stress response","type":"exact"}],"termid":"FYPO:0003692"}


id: FYPO:0007126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation that takes place as part of mitotic spindle assembly, and which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["GO:0001578","PMID:31615768","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule bundle formation during mitotic spindle assembly","synonyms":[{"name":"abnormal microtubule array formation during mitotic spindle assembly","type":"related"},{"name":"abnormal microtubule bundle formation in spindle during mitotic prophase","type":"related"},{"name":"abnormal microtubule bundle formation involved in mitotic spindle assembly","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during prophase","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during spindle assembly","type":"related"}],"termid":"FYPO:0007126"}


id: PBO:0068424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1","termid":"PBO:0068424"}


id: PR:P31397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P31397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.10c","synonyms":[{"name":"Spom972h-map3","type":"exact"}],"termid":"PR:P31397"}


id: PBO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis14","termid":"PBO:0001891"}


id: PBO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 2","termid":"PBO:0046376"}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["EC:1.12.2.-","GO:0016698"],"termid":"GO:0016697"}


id: PBO:0017094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo TFIIH complex subunit Tfb6","termid":"PBO:0017094"}


id: PBO:0053176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 1","termid":"PBO:0053176"}


id: PBO:0082984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoskeletal protein binding protein; required for assembly of the cortical actin cytoskeleton; interacts with proteins regulating actin dynamics and proteins required for endocytosis; found in the nucleus and cell cortex; has 3 SH3 domains","termid":"PBO:0082984"}


id: GO:0039719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic viral factory derived from the Golgi in which Bunyaviridae replication takes place. Tubes are membranous structures close to the assembly and budding sites, and their function may be to connect viral replication and morphogenesis inside viral factories.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic viral factory","termid":"GO:0039714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tube viral factory","termid":"GO:0039719"}


id: PBO:0074034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20 pseudogene 1","termid":"PBO:0074034"}


id: PBO:0067596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 759, pseudogene","termid":"PBO:0067596"}


id: GO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that controls the frequency, rate or extent of G1 cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031657)","synonyms":[{"name":"G1/S-specific regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031657"}


id: PR:Q9P544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1635.01 gene.","definition_xrefs":["UniProtKB:Q9P544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein porin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1635.01","synonyms":[{"name":"Spom972h-SPAC1635.01","type":"exact"}],"termid":"PR:Q9P544"}


id: GO:1905466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of G-quadruplex DNA unwinding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26503245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA unwinding","termid":"GO:1905465"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"G-quadruplex DNA unwinding","termid":"GO:0044806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of G-quadruplex DNA unwinding","synonyms":[{"name":"down regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"down-regulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"downregulation of G-quadruplex DNA unwinding","type":"exact"},{"name":"inhibition of G-quadruplex DNA unwinding","type":"narrow"}],"termid":"GO:1905466"}


id: PBO:0065881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB31, member RAS oncogene family","termid":"PBO:0065881"}


id: PBO:0067564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 717, pseudogene","termid":"PBO:0067564"}


id: PBO:0034236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tracheates","termid":"PBO:0034236"}


id: GO:0120169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cold stimulus is received and converted into a molecular signal as part of thermoception.","definition_xrefs":["PMID:21335241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus involved in thermoception","termid":"GO:0050960"},{"relation_name":"part_of","term_name":"sensory perception of cold stimulus","termid":"GO:0062035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cold stimulus involved in thermoception","synonyms":[{"name":"sensory detection of cold stimulus during thermoception","type":"exact"},{"name":"sensory transduction of cold stimulus during thermoception","type":"exact"},{"name":"thermoception, sensory detection of cold stimulus","type":"exact"},{"name":"thermoception, sensory transduction of cold stimulus","type":"exact"}],"termid":"GO:0120169"}


id: PBO:0026714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026714"}


id: PBO:0050601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 11-beta dehydrogenase 1","termid":"PBO:0050601"}


id: GO:0050961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus is received and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of temperature stimulus","termid":"GO:0016048"},{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"part_of","term_name":"sensory perception of temperature stimulus","termid":"GO:0050951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory detection of temperature stimulus","type":"exact"},{"name":"sensory detection of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory detection of thermal stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory detection of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory detection of thermal stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of heat stimulus","type":"narrow"},{"name":"sensory perception, sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of thermal stimulus","type":"exact"},{"name":"sensory transduction of heat stimulus during sensory perception","type":"narrow"},{"name":"sensory transduction of temperature stimulus","type":"exact"},{"name":"sensory transduction of temperature stimulus during sensory perception","type":"exact"},{"name":"sensory transduction of thermal stimulus during sensory perception","type":"exact"}],"termid":"GO:0050961"}


id: GO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont undergoes a change in shape or form, within the host's cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete morphogenesis of symbiont in host cell (obsolete GO:0044698)","termid":"GO:0044698"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: GO:0005756
data:
  {"annotated_genes":["SJAG_00915","SJAG_03114","SJAG_00438"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98467,100393,104117],"is_not":false,"summary":null,"term":"GO:0005756"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the mitochondrial membrane-associated F0 proteins; rotates within the catalytic core during catalysis.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, central stalk","termid":"GO:0045269"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","termid":"GO:0000275"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00438":null,"SJAG_00915":null,"SJAG_03114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, central stalk","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005756","terms_by_termid":{"GO:0005756":null}}


id: GO:0035570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal serine of proteins.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}


id: PBO:0060903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 2","termid":"PBO:0060903"}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: PBO:0083176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps TEL07R","termid":"PBO:0083176"}


id: GO:0099602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that directly (via physical interaction or direct modification) activates, inhibits or otherwise modulates the activity of a neurotransmitter receptor. Modulation of activity includes changes in desensitization rate, ligand affinity, ion selectivity and pore-opening/closing.","definition_xrefs":["PMID:18387948","GOC:dos","PMID:12740117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"neurotransmitter receptor regulator activity","termid":"GO:0099602"}


id: GO:2000607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation involved in mesonephros development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in kidney development","termid":"GO:1901723"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in mesonephros development","termid":"GO:2000607"}


id: PBO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_phenotype","termid":"PBO:0034225"}


id: PBO:0034298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_distributary_of","termid":"PBO:0034298"}


id: PBO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2 (predicted)","termid":"PBO:0031889"}


id: PBO:0039889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 44","termid":"PBO:0039889"}


id: GO:0033201
data:
  {"annotated_genes":["SJAG_04236","SJAG_02916"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109592,112889],"is_not":false,"summary":null,"term":"GO:0033201"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RDP-glucose + [alpha-D-glucosyl-(1,4)]n = RDP + [alpha-D-glucosyl-(1,4)]n+1, where RDP is ADP or UDP.","definition_xrefs":["PMID:17472966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02916":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"alpha-1,4-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:18189","EC:2.4.1.21"],"synonyms":[{"name":"1,4-alpha-glucan synthase activity","type":"exact"}],"termid":"GO:0033201","terms_by_termid":{"GO:0033201":null}}


id: GO:1904862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inhibitory synapse.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000079","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"inhibitory synapse assembly","synonyms":[{"name":"inhibitory synapse formation","type":"exact"}],"termid":"GO:1904862"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: GO:1901674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K27 acetylation (obsolete GO:1901674)","synonyms":[{"name":"regulation of histone H3 acetylation at K27","type":"exact"},{"name":"regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901674"}


id: GO:0140700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic G-P(3'-5')A-P(2'-5') (cyclic 3',2' GAMP).","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic GMP-AMP synthase activity","termid":"GO:0140699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP synthase activity","synonyms":[{"name":"3',2' cyclic-GMP-AMP synthase activity","type":"exact"},{"name":"3',2'-cyclic GAMP synthase activity","type":"exact"}],"termid":"GO:0140700"}


id: GO:1902181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of verruculogen.","definition_xrefs":["PMID:23649274","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"diol biosynthetic process","termid":"GO:0034312"},{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"verruculogen metabolic process","termid":"GO:1902179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"verruculogen biosynthetic process","synonyms":[{"name":"verruculogen formation","type":"exact"},{"name":"verruculogen synthesis","type":"exact"},{"name":"verruculogen anabolism","type":"exact"},{"name":"verruculogen biosynthesis","type":"exact"}],"termid":"GO:1902181"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: GO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphate + long-chain-polyphosphate = dolichol-phosphate + long-chain-polyphosphate.","definition_xrefs":["EC:2.7.4.20","MetaCyc:2.7.4.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichyl-diphosphate-polyphosphate phosphotransferase activity","secondary_identifiers":["RHEA:19417"],"synonyms":[{"name":"dolichyl-diphosphate:polyphosphate phosphotransferase activity","type":"related"},{"name":"dolichylpyrophosphate:polyphosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047337"}


id: PBO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx2","termid":"PBO:0002205"}


id: GO:0048401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of intermediate mesodermal cell fate specification","termid":"GO:0048399"},{"relation_name":"negatively_regulates","term_name":"intermediate mesodermal cell fate specification","termid":"GO:0048398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate mesodermal cell fate specification","synonyms":[{"name":"down regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"downregulation of intermediate mesodermal cell fate specification","type":"exact"},{"name":"inhibition of intermediate mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048401"}


id: GO:0004414
data:
  {"annotated_genes":["SJAG_04305","SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75358,75465],"is_not":false,"summary":null,"term":"GO:0004414"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + acetyl-CoA = O-acetyl-L-homoserine + CoA.","definition_xrefs":["EC:2.3.1.31","RHEA:13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"homoserine O-acetyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R01776","MetaCyc:HOMOSERINE-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homoserine O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-homoserine O-acetyltransferase activity","type":"related"},{"name":"homoserine O-trans-acetylase activity","type":"related"},{"name":"homoserine acetyltransferase activity","type":"related"},{"name":"homoserine transacetylase activity","type":"broad"},{"name":"homoserine-O-transacetylase activity","type":"related"}],"termid":"GO:0004414","terms_by_termid":{"GO:0004414":null}}


id: PBO:0073982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 3","termid":"PBO:0073982"}


id: PBO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pfs2","termid":"PBO:0000283"}


id: GO:0043886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a carboxysome shell, an organelle found in all cyanobacteria and some chemoautotrophs, consisting of a proteinaceous coat and enzymes for the fixation of CO2.","definition_xrefs":["PMID:28934381","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of carboxysome shell","synonyms":[{"name":"structural constituent of carboxysome","type":"related"}],"termid":"GO:0043886"}


id: GO:0140351
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90037,93481],"is_not":false,"summary":null,"term":"GO:0140351"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of glycosylceramide from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP. Glycosylceramides are ceramides containing a functional group derived from a sugar.","definition_xrefs":["PMID:30530492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycosylceramide flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactocerebroside flippase activity","type":"narrow"},{"name":"galactosylceramide flippase activity","type":"narrow"},{"name":"glucosylceramide flippase activity","type":"narrow"},{"name":"glycoceramide flippase activity","type":"exact"},{"name":"glycosylceramide flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140351","terms_by_termid":{"GO:0140351":null}}


id: MOD:00383
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and a glycine residue to form 2-imino-glutamic acid 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0378","PubMed:11682051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-imino-glutamic acid 5-imidazolinone glycine","synonyms":[{"name":"2,N-didehydroglutamyl-5-imidazolinone glycine","type":"exact"},{"name":"2-(3-carboxy-1-iminopropyl)-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"2-imino-glutamic acid 5-imidazolinone glycine","type":"exact"},{"name":"2-imino-glutamyl-5-imidazolinone glycine","type":"exact"},{"name":"4-[1-(carboxymethyl)-5-oxo-4,5-dihydro-1H-imidazol-2-yl]-4-iminobutanoic acid","type":"exact"},{"name":"CROSSLNK 2-iminomethyl-5-imidazolinone (Glu-Gly)","type":"exact"},{"name":"[2-(3-carboxy-1-iminopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00383"}


id: GO:1900925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycine import.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of glycine import across plasma membrane","termid":"GO:1900923"},{"relation_name":"positively_regulates","term_name":"glycine import across plasma membrane","termid":"GO:1903804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of glycine import across plasma membrane","synonyms":[{"name":"activation of glycine import","type":"narrow"},{"name":"positive regulation of glycine import","type":"broad"},{"name":"up regulation of glycine import","type":"exact"},{"name":"up-regulation of glycine import","type":"exact"},{"name":"upregulation of glycine import","type":"exact"}],"termid":"GO:1900925"}


id: PBO:0069493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 760, pseudogene","termid":"PBO:0069493"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: PBO:0068492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 76, pseudogene","termid":"PBO:0068492"}


id: GO:0008693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxydecanoyl-[acyl-carrier protein] = 2,3-decenoyl-[acyl-carrier protein] or 3,4-decenoyl-[acyl-carrier protein] + H2O.","definition_xrefs":["PMID:8910376","RHEA:41860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","termid":"GO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(3R)-3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity","secondary_identifiers":["MetaCyc:3-HYDROXYDECANOYL-ACP-DEHYDR-RXN"],"synonyms":[{"name":"(3R)-3-hydroxydecanoyl-acyl-carrier-protein hydro-lyase activity","type":"exact"},{"name":"3-hydroxydecanoyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxydecanoyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity","type":"exact"},{"name":"3-hydroxydecanoyl-acyl carrier protein dehydrase activity","type":"exact"},{"name":"3-hydroxydecanoyl-acyl carrier protein dehydratase activity","type":"exact"},{"name":"3-hydroxydecanoyl-acyl-carrier-protein dehydratase activity","type":"exact"},{"name":"beta-hydroxyacyl-ACP dehydrase activity","type":"exact"},{"name":"beta-hydroxyacyl-acyl carrier protein dehydratase activity","type":"exact"},{"name":"beta-hydroxydecanoate dehydrase activity","type":"exact"},{"name":"beta-hydroxydecanoyl thioester dehydrase activity","type":"exact"}],"termid":"GO:0008693"}


id: PBO:0007873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin microtubule-binding subunit, p150-Glued Ssm4","termid":"PBO:0007873"}


id: GO:0070762
data:
  {"annotated_genes":["SJAG_03200"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114208],"is_not":false,"summary":null,"term":"GO:0070762"}]},"cv_name":"cellular_component","definition":"A subcomplex of the nuclear pore complex (NPC) that spans the nuclear membrane and anchors the NPC to the nuclear envelope. In S. cerevisiae, the transmembrane ring is composed of Pom152p, Pom34p, and Ndc1p. In vertebrates, it is composed of Gp210, Ndc1, and Pom121. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. A single 'spoke', can be isolated and is sometime referred to as the Ndc1 complex.","definition_xrefs":["PMID:19524430","PMID:20947011","PMID:22419078","PMID:18046406","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634","GO:0005643"],"is_obsolete":false,"name":"nuclear pore transmembrane ring","references_by_uniquename":{"PMID:21733045":null},"synonyms":[{"name":"NDC1 complex","type":"exact"},{"name":"NDC1 subcomplex","type":"exact"}],"termid":"GO:0070762","terms_by_termid":{"GO:0070762":null}}


id: PBO:0034473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_saturation","termid":"PBO:0034473"}


id: PBO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB3 regulatory factor","termid":"PBO:0043880"}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["PMID:18007680","ISBN:0781735149","PMID:20200518","PMID:20065995","PMID:18000958","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: GO:0060512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a prostate gland are generated and organized.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prostate gland morphogenesis","termid":"GO:0060512"}


id: GO:0032775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent transfer of a methyl group to N-6 of adenine in a DNA molecule.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation","termid":"GO:0006306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA methylation on adenine","synonyms":[{"name":"adenine methylation","type":"related"}],"termid":"GO:0032775"}


id: PBO:0029435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_abnormal_germ_tube_morphology","termid":"PBO:0029435"}


id: PBO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 1","termid":"PBO:0061229"}


id: GO:0009890
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id: PBO:0077310
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id: PBO:0045190
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id: PBO:0057620
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id: PBO:0071662
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id: GO:0071499
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id: GO:0060958
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id: PBO:0040889
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id: PBO:0044528
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id: PR:O94286
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23418:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.01","secondary_identifiers":["UniProtKB:O94286"],"synonyms":[{"name":"ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Fe-ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.01","type":"related"},{"name":"Spom972h-ADI1","type":"exact"},{"name":"acireductone dioxygenase (Fe(2+)-requiring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94286"}


id: PBO:0031432
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id: GO:0046645
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id: GO:0042547
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id: GO:0010653
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id: GO:2000841
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id: PBO:0070260
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id: PBO:0045845
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id: GO:0090600
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id: PBO:0060897
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id: GO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. In mammals, the proximal tubule is a nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal tubule development","termid":"GO:0072014"}


id: FYPO:0001190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more enzymes that degrades cell wall polysaccharides. Cells stop growing (and may die) at a concentration of such enzymes that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cell wall-degrading enzymes","secondary_identifiers":["FYPO:0001191"],"synonyms":[{"name":"hypersensitive to cell wall-degrading enzymes","type":"exact"},{"name":"sensitive to Lyticase","type":"narrow"},{"name":"sensitive to Novozyme 234","type":"narrow"},{"name":"sensitive to Zymolyase","type":"narrow"},{"name":"sensitive to beta-1,3-glucan laminaripentaohydrolase","type":"narrow"},{"name":"sensitive to cell wall-degrading enzymes during mitotic cell cycle","type":"related"},{"name":"sensitive to cell wall-degrading enzymes during vegetative growth","type":"exact"},{"name":"sensitive to lysing enzymes from Trichoderma harzianum","type":"narrow"}],"termid":"FYPO:0001190"}


id: PBO:0046460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial stromal interaction 1","termid":"PBO:0046460"}


id: PBO:0089572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3e","termid":"PBO:0089572"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: PBO:0050324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 26","termid":"PBO:0050324"}


id: GO:0046001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046001"}


id: GO:0019364
data:
  {"annotated_genes":["SJAG_04495","SJAG_03373","SJAG_03660","SJAG_00633","SJAG_00685","SJAG_04048","SJAG_02945","SJAG_03828","SJAG_02369","SJAG_03852","SJAG_00605","SJAG_03091","SJAG_00027","SJAG_03903","SJAG_02135","SJAG_06622","SJAG_02009","SJAG_04192","SJAG_04334","SJAG_00461","SJAG_00839","SJAG_01310","SJAG_02796","SJAG_05314","SJAG_02107","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90134,100844,104714,76814,104716,100845,111515,99074,93543,93807,101212,104715,100846,104712,104710,101211,104711,104713,98811,90604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[84370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[93727,106838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[72240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[75445,72769],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:pde","GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyridine nucleotide metabolic process","termid":"GO:0019362"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyridine nucleotide breakdown","type":"exact"},{"name":"pyridine nucleotide catabolism","type":"exact"},{"name":"pyridine nucleotide degradation","type":"exact"}],"termid":"GO:0019364","terms_by_termid":{"GO:0006742":null,"GO:0019677":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: PBO:0049587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 5, pseudogene","termid":"PBO:0049587"}


id: PR:O74465
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrr1 gene.","definition_xrefs":["UniProtKB:O74465","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase required for RNAi-mediated heterochromatin assembly 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.03","synonyms":[{"name":"Spom972h-hrr1","type":"exact"}],"termid":"PR:O74465"}


id: GO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain.","definition_xrefs":["EC:2.4.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme activity","secondary_identifiers":["Reactome:R-HSA-3322005","Reactome:R-HSA-3322057","MetaCyc:GLYCOGEN-BRANCH-RXN","Reactome:R-HSA-3322016","Reactome:R-HSA-3878762"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1,4-alpha-D-glucano)-transferase activity","type":"exact"},{"name":"1,4-glucan-6-(1,4-glucano)-transferase activity","type":"exact"},{"name":"Q-enzyme","type":"related"},{"name":"alpha-1,4-glucan:alpha-1,4-glucan-6-glycosyltransferase activity","type":"related"},{"name":"alpha-glucan-branching glycosyltransferase activity","type":"related"},{"name":"amylo-(1,4 to 1,6)transglucosidase activity","type":"related"},{"name":"amylo-(1,4->1,6)-transglycosylase activity","type":"related"},{"name":"amylose isomerase activity","type":"related"},{"name":"branching enzyme activity","type":"related"},{"name":"branching glycosyltransferase activity","type":"related"},{"name":"enzymatic branching factor","type":"related"},{"name":"enzyme Q","type":"related"},{"name":"glucosan transglycosylase activity","type":"related"},{"name":"glycogen branching enzyme activity","type":"related"},{"name":"plant branching enzyme","type":"related"},{"name":"starch branching enzyme","type":"related"}],"termid":"GO:0003844"}


id: MOD:00742
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a copper atom or a cluster containing copper for hydrogen atoms, or that coordinates a copper ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper containing modified residue","synonyms":[{"name":"CuRes","type":"exact"}],"termid":"MOD:00742"}


id: GO:0035421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity involved in innate immune response (obsolete GO:0035421)","termid":"GO:0035421"}


id: PBO:0076130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUB1 pseudogene 1","termid":"PBO:0076130"}


id: FYPO:0004741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of filamentous actin (F-actin) in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type) during mitotic anaphase B.","definition_xrefs":["PomBase:mah","PMID:25688133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring","termid":"FYPO:0004740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal F-actin level in actomyosin contractile ring during anaphase B","synonyms":[{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during mitotic cell cycle","type":"related"},{"name":"normal F-actin level in actomyosin contractile ring during anaphase B during vegetative growth","type":"exact"},{"name":"normal F-actin level in contractile ring during anaphase B","type":"exact"},{"name":"normal F-actin level in cytokinetic contractile ring during anaphase B","type":"exact"},{"name":"normal abundance of actin in actomyosin contractile ring in anaphase B","type":"exact"},{"name":"normal actomyosin contractile ring F-actin level during anaphase B","type":"exact"},{"name":"normal filamentous actin level in actomyosin contractile ring during anaphase B","type":"exact"}],"termid":"FYPO:0004741"}


id: PBO:0073154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC31 homolog B, COPII coat complex component","termid":"PBO:0073154"}


id: GO:0034853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoate + H+ = 2,2-dimethyl-3-pentanone + CO2.","definition_xrefs":["UM-BBD_reactionID:r1278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2,4,4-trimethyl-3-oxopentanoate decarboxylase activity","termid":"GO:0034853"}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: PBO:0003406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl2","termid":"PBO:0003406"}


id: PBO:0083455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene GIM5/YML094W; deletion confers sensitivity to GSAO","termid":"PBO:0083455"}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: PR:G2TRV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRV0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.10","synonyms":[{"name":"Spom972h-wtf8","type":"exact"}],"termid":"PR:G2TRV0"}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: GO:0051231
data:
  {"annotated_genes":["SJAG_00244","SJAG_04597","SJAG_04003","SJAG_04745","SJAG_01215","SJAG_00794","SJAG_00082","SJAG_02624","SJAG_03540","SJAG_02761","SJAG_02336","SJAG_00930","SJAG_04464","SJAG_01224","SJAG_00773","SJAG_04841","SJAG_01613","SJAG_03073","SJAG_02246","SJAG_03048","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90895,74950,76699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[96915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051232"},{"annotations":[96919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903562"},{"annotations":[113728,113226,102785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000022"},{"annotations":[90372,98971,95878],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[103600,95879,96923,94158,99336,95350,92846],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[94752,92847,90374,104183],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[97828],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902845"},{"annotations":[85721,90023],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902846"},{"annotations":[106286],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032888"},{"annotations":[110240],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the distance is lengthened between poles of the spindle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"part_of","term_name":"nuclear chromosome segregation","termid":"GO:0098813"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00930":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"spindle elongation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0051231","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0032888":null,"GO:0051232":null,"GO:0051256":null,"GO:0061804":null,"GO:0061805":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null,"GO:1903562":null}}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: GO:0005483
data:
  {"annotated_genes":["SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75584],"is_not":false,"summary":null,"term":"GO:0005483"}]},"cv_name":"molecular_function","definition":"Binding to both N-ethylmaleimide-sensitive fusion protein (NSF) and a cis-SNARE complex (i.e. a SNARE complex in which all proteins are associated with the same membrane) and increasing the ATPase activity of NSF, thereby allowing ATP hydrolysis by NSF to disassemble the cis-SNARE complex.","definition_xrefs":["PMID:15556857","PMID:14570579","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"soluble NSF attachment protein activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"SNAP","type":"exact"}],"termid":"GO:0005483","terms_by_termid":{"GO:0005483":null}}


id: PBO:0054215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1595","termid":"PBO:0054215"}


id: GO:0102951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-phenylalanine + ATP = H+ + indole-3-acetyl-phenylalanine + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:6.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-phenylalanine synthetase activity","secondary_identifiers":["MetaCyc:RXN-9084"],"termid":"GO:0102951"}


id: PBO:0028841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC3L","termid":"PBO:0028841"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: PBO:0083931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog","termid":"PBO:0083931"}


id: PBO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 4","termid":"PBO:0048623"}


id: PBO:0070322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 11","termid":"PBO:0070322"}


id: GO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin insulator sequence binding (obsolete GO:0006341)","synonyms":[{"name":"chromatin insulator sequence binding","type":"exact"}],"termid":"GO:0006341"}


id: GO:0072201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of mesenchymal cell proliferation. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell proliferation","termid":"GO:0072201"}


id: PBO:0054854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2268","termid":"PBO:0054854"}


id: PBO:0042174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 4","termid":"PBO:0042174"}


id: PBO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase","termid":"PBO:0050534"}


id: PBO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub1","termid":"PBO:0002308"}


id: GO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a collectin, a member of a group of structurally related pattern recognition molecules characterized by having a carbohydrate recognition domain of the C-type lectin family at the C-terminus and a collagenous domain at the N-terminus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"collectin binding","termid":"GO:0001862"}


id: PBO:0087429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase; ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; contributes to the oligomerization of the complex, which in turn determines the shape of inner membrane cristae; phosphorylated","termid":"PBO:0087429"}


id: PBO:0091217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sub-telomeric 5Tm protein family","termid":"PBO:0091217"}


id: PBO:0059024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 13","termid":"PBO:0059024"}


id: GO:0009780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An NADPH regeneration process that contributes to the light reactions of photosynthesis. The light reactions of photosynthesis use energy from photons to generate high-energy electrons. These electrons are used directly to reduce NADP+ to NADPH. NADPH is a relatively stable molecule and can pass on its hydrogen atom to other molecules in chemical reactions.","definition_xrefs":["GOC:jid","ISBN:0716746840","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"photosynthetic NADP+ reduction","termid":"GO:0009780"}


id: PBO:0062012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 1 pseudogene","termid":"PBO:0062012"}


id: PBO:0110381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGAE pseudogene 1","termid":"PBO:0110381"}


id: PBO:0091793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, phosphate responsive","termid":"PBO:0091793"}


id: GO:2000002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"negatively_regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"negative regulation of DNA damage checkpoint","synonyms":[{"name":"negative regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000002"}


id: PBO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1","termid":"PBO:0090634"}


id: PBO:0048093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 14","termid":"PBO:0048093"}


id: GO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the metanephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}


id: PR:Q9HDW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03262","PANTHER:PTHR12586:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP18G5.02","secondary_identifiers":["UniProtKB:Q9HDW1"],"synonyms":[{"name":"PGP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGS1","type":"exact"},{"name":"phosphatidylglycerophosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW1"}


id: GO:0019332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.","definition_xrefs":["MetaCyc:P282-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"},{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using nitrite as electron donor","synonyms":[{"name":"nitrite oxidation","type":"broad"}],"termid":"GO:0019332"}


id: GO:1901449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to butan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of response to butan-1-ol","termid":"GO:1901448"},{"relation_name":"negatively_regulates","term_name":"response to butan-1-ol","termid":"GO:1901422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to butan-1-ol","synonyms":[{"name":"down regulation of response to butan-1-ol","type":"exact"},{"name":"down-regulation of response to butan-1-ol","type":"exact"},{"name":"downregulation of response to butan-1-ol","type":"exact"},{"name":"inhibition of response to butan-1-ol","type":"narrow"}],"termid":"GO:1901449"}


id: GO:0042925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"benzoate transmembrane transporter activity","secondary_identifiers":["RHEA:32811"],"synonyms":[{"name":"benzoate transporter activity","type":"related"}],"termid":"GO:0042925"}


id: GO:1902843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:24004945","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"positively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of netrin-activated signaling pathway","synonyms":[{"name":"activation of netrin signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signal transduction pathway","type":"narrow"},{"name":"activation of netrin-activated signaling pathway","type":"narrow"},{"name":"activation of netrin-activated signalling pathway","type":"narrow"},{"name":"activation of netrin-mediated signaling pathway","type":"narrow"},{"name":"positive regulation of netrin signaling pathway","type":"exact"},{"name":"positive regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"positive regulation of netrin-activated signalling pathway","type":"exact"},{"name":"positive regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up regulation of netrin signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"up-regulation of netrin signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"up-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"up-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"up-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"upregulation of netrin signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"upregulation of netrin-activated signaling pathway","type":"exact"},{"name":"upregulation of netrin-activated signalling pathway","type":"exact"},{"name":"upregulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902843"}


id: PBO:0074248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC66A2 pseudogene 2","termid":"PBO:0074248"}


id: PBO:0041228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 50","termid":"PBO:0041228"}


id: GO:0098708
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112328],"is_not":false,"summary":null,"term":"GO:0098708"}]},"cv_name":"biological_process","definition":"The directed movement of glucose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"},{"relation_name":"is_a","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"glucose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061490","GO:1990821"],"synonyms":[{"name":"glucose import into cell","type":"exact"},{"name":"high affinity glucose import","type":"narrow"}],"termid":"GO:0098708","terms_by_termid":{"GO:0098708":null}}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: PBO:0063725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphate synthase 1","termid":"PBO:0063725"}


id: PBO:0068098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 405","termid":"PBO:0068098"}


id: PBO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavonol reductase/cinnamoyl-CoA reductase family","termid":"PBO:0001801"}


id: GO:0005769
data:
  {"annotated_genes":["SJAG_01112","SJAG_01309","SJAG_04616","SJAG_03250","SJAG_02240","SJAG_01448"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72738,74228,78666,95400,98101],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[91474],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.","definition_xrefs":["PMID:19696797","GOC:mah","NIF_Subcellular:nlx_subcell_20090701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01112":null,"SJAG_01309":null,"SJAG_01448":null,"SJAG_02240":null,"SJAG_03250":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"early endosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005769","terms_by_termid":{"GO:0005769":null,"GO:0031901":null}}


