# terms

id: GO:0110133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a CRISPR-cas system.","definition_xrefs":["PMID:30190308","PMID:30190307"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CRISPR-cas system (obsolete GO:0110133)","termid":"GO:0110133"}


id: PBO:0034523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_subtelomeric_chromatin_knob_formation","termid":"PBO:0034523"}


id: FYPO:0007618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus begins later than normal. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus during vegetative growth","termid":"FYPO:0000345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein export from nucleus","synonyms":[{"name":"delayed onset of protein export from nucleus during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein export from nucleus during vegetative growth","type":"exact"},{"name":"delayed protein export from nucleus","type":"exact"}],"termid":"FYPO:0007618"}


id: PBO:0068281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 2","termid":"PBO:0068281"}


id: GO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung attaining its shape.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060501"}


id: PBO:0057996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3920","termid":"PBO:0057996"}


id: PBO:0062904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-ACP synthase, mitochondrial","termid":"PBO:0062904"}


id: GO:1990835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The appearance of an insulin-like growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:21993393"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin-like growth factor production (obsolete GO:1990835)","synonyms":[{"name":"IGF production","type":"related"}],"termid":"GO:1990835"}


id: GO:0102945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + soyasapogenol B = UDP(3-) + a soyasapogenol B monoglucoside.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"soyasapogenol B UDP-glucosyl transferase activity","secondary_identifiers":["MetaCyc:RXN-9037"],"termid":"GO:0102945"}


id: PBO:0041420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 putative open reading frame 17","termid":"PBO:0041420"}


id: GO:0035566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a metanephric kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney size","termid":"GO:0035564"},{"relation_name":"part_of","term_name":"metanephros morphogenesis","termid":"GO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephros size","synonyms":[{"name":"regulation of metanephric kidney size","type":"exact"}],"termid":"GO:0035566"}


id: GO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-iditol + NAD+ = D-sorbose + NADH.","definition_xrefs":["MetaCyc:D-IDITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"},{"relation_name":"is_a","term_name":"hexitol dehydrogenase activity","termid":"GO:0031320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-iditol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12725"],"termid":"GO:0047824"}


id: PBO:0034098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-realized_in","termid":"PBO:0034098"}


id: GO:0090156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of sphingolipids within a cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular sphingolipid homeostasis","synonyms":[{"name":"cellular sphingolipid homeostasis","type":"exact"}],"termid":"GO:0090156"}


id: GO:0018244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via peptidyl-tryptophan, 1'-glycosyl-L-tryptophan; results in the formation of an (S)-2-amino-3-(1-D-mannopyranosyloxy-1H-indol-3-yl)propanoic acid residue.","definition_xrefs":["RESID:AA0156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein N-linked glycosylation","termid":"GO:0006487"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein N-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid N-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018244"}


id: PATO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilicity","termid":"PATO:0001886"}


id: PR:O74891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ret3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit zeta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.07","synonyms":[{"name":"Spom972h-ret3","type":"exact"},{"name":"zeta-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"zeta-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74891"}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: PBO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein, expressed during meiotic cell cycle, possibly related to metazoan RAB11FIP4 family","termid":"PBO:0090089"}


id: GO:0102379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: PBO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA family member 4, pseudogene","termid":"PBO:0060433"}


id: PBO:0041314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69","termid":"PBO:0041314"}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: GO:0070570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection regeneration","termid":"GO:0070570"}


id: PBO:0072535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 65","termid":"PBO:0072535"}


id: PBO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 21","termid":"PBO:0070889"}


id: PBO:0059976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 21","termid":"PBO:0059976"}


id: PBO:0038989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 3","termid":"PBO:0038989"}


id: FYPO:0004324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation at centromere central core during vegetative growth","termid":"FYPO:0003415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004324"}


id: PBO:0039039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL1 antisense RNA 1","termid":"PBO:0039039"}


id: GO:0034344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["PMID:16734557","ISBN:0126896631","GOC:add","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of type III interferon production","synonyms":[{"name":"regulation of type III IFN production","type":"exact"}],"termid":"GO:0034344"}


id: GO:0032501
data:
  {"annotated_genes":["SJAG_01633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045056"}]},"cv_name":"biological_process","definition":"Any biological process, occurring at the level of a multicellular organism, pertinent to its function.","definition_xrefs":["GOC:curators","GOC:dph","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01633":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal process","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0050874","GO:0044707"],"synonyms":[{"name":"organismal physiological process","type":"exact"},{"name":"single-multicellular organism process","type":"related"}],"termid":"GO:0032501","terms_by_termid":{"GO:0045056":null}}


id: PBO:0043000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase 3 like 1","termid":"PBO:0043000"}


id: PBO:0042825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylesterase 4A","termid":"PBO:0042825"}


id: PBO:0068805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 42, pseudogene","termid":"PBO:0068805"}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: PATO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's having branches.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched","synonyms":[{"name":"ramified","type":"exact"},{"name":"ramiform","type":"exact"}],"termid":"PATO:0000402"}


id: PR:O42706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.08","synonyms":[{"name":"Spom972h-rpl2102","type":"exact"}],"termid":"PR:O42706"}


id: PBO:0079218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 3","termid":"PBO:0079218"}


id: PATO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001108 relative amplitude value (obsolete PATO:0001108)","termid":"PATO:0001108"}


id: GO:0038116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL21 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 signaling pathway","synonyms":[{"name":"C-C chemokine receptor type 7 signaling pathway","type":"related"},{"name":"CCL21-mediated signaling pathway","type":"exact"},{"name":"chemokine (C-C motif) ligand 21 signalling pathway","type":"exact"}],"termid":"GO:0038116"}


id: GO:0080076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a caffeoyl CoA molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity","termid":"GO:0080076"}


id: GO:0072151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell fate commitment","termid":"GO:0072151"}


id: PBO:0030872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_process_during_vegetative_growth","termid":"PBO:0030872"}


id: PBO:0052373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18B pseudogene 1","termid":"PBO:0052373"}


id: PBO:0002839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanol-hypersensitive mutant protein Etd1","termid":"PBO:0002839"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0001288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ras1","termid":"PBO:0001288"}


id: PBO:0062400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 23 pseudogene","termid":"PBO:0062400"}


id: GO:0050133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-hydroxy-L-lysine + acetyl-CoA = N(6)-acetyl-N(6)-hydroxy-L-lysine + CoA.","definition_xrefs":["RHEA:22388","EC:2.3.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"N6-hydroxylysine O-acetyltransferase activity","secondary_identifiers":["MetaCyc:N6-HYDROXYLYSINE-O-ACETYLTRANSFERASE-RXN","KEGG_REACTION:R03168"],"synonyms":[{"name":"N(6)-hydroxylysine acetylase activity","type":"related"},{"name":"N6-hydroxylysine acetylase activity","type":"related"},{"name":"N6-hydroxylysine:acetyl CoA N6-transacetylase activity","type":"related"},{"name":"acetyl-CoA:6-N-hydroxy-L-lysine 6-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N6-hydroxy-L-lysine 6-acetyltransferase activity","type":"related"}],"termid":"GO:0050133"}


id: PBO:0006273
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id: GO:0007079
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id: PBO:0003239
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id: PBO:0052705
data:
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id: GO:0075272
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id: GO:0035783
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id: FYPO:0007093
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id: GO:1905502
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id: PBO:0080572
data:
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id: PBO:0091075
data:
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id: PBO:0089486
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2","termid":"PBO:0089486"}


id: PBO:0050308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 10","termid":"PBO:0050308"}


id: GO:0098796
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id: PR:Q9USZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transportin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11G11.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.07","secondary_identifiers":["UniProtKB:Q9USZ2"],"synonyms":[{"name":"Spom972h-TNPO3","type":"exact"}],"termid":"PR:Q9USZ2"}


id: GO:0015498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: pantothenate(out) + Na+(out) = pantothenate(in) + Na+(in).","definition_xrefs":["TC:2.A.21.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"pantothenate:sodium symporter activity","termid":"GO:0015498"}


id: GO:0010589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process within a leaf by which specific areas of cell differentiation are determined along a proximal/distal axis.","definition_xrefs":["PMID:18398054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf proximal/distal pattern formation","termid":"GO:0010589"}


id: GO:1990442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["PMID:23985028","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrosative stress","termid":"GO:0071500"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","synonyms":[{"name":"nitrosative stress-induced apoptosis","type":"related"},{"name":"nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:1990442"}


id: PBO:0062936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 2","termid":"PBO:0062936"}


id: PR:O94289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin homeostasis protein lub1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.04c","synonyms":[{"name":"Spom972h-lub1","type":"exact"}],"termid":"PR:O94289"}


id: GO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an antigenic stimulus, which can be include any number of T cell or B cell epitopes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}


id: PBO:0028381
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_uracil_DNA_N-glycosylase_activity","termid":"PBO:0028381"}


id: GO:1901205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901205)","synonyms":[{"name":"down regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"downregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"inhibition of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901205"}


id: GO:0098862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part consisting of multiple, closely packed actin-based cell projections.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cluster of actin-based cell projections","termid":"GO:0098862"}


id: PBO:0047946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(16)(q22.1)","termid":"PBO:0047946"}


id: PBO:0084436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA; recycles glyoxylate generated during allantoin degradation; SWAT-GFP and mCherry fusion proteins localize to the cytosol; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0084436"}


id: PBO:0059331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6","termid":"PBO:0059331"}


id: PBO:0079004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 4-1","termid":"PBO:0079004"}


id: GO:0070796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cleistothecium development, a process that leads to the formation of a cleistothecium. The cleistothecium is a closed sexual fruiting body that contains ascospores in linear asci, characteristic of some filamentous Ascomycete fungi such as members of the genera Aspergillus and Emericella.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"regulates","term_name":"cleistothecium development","termid":"GO:0070791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cleistothecium development","termid":"GO:0070796"}


id: PBO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 19","termid":"PBO:0071990"}


id: GO:0009512
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.","definition_xrefs":["PMID:16352458","ISBN:0943088399","PMID:16228398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome b6f complex","secondary_identifiers":["Wikipedia:Cytochrome_b6f_complex"],"synonyms":[{"name":"cyt b(6)f complex","type":"exact"},{"name":"cyt b6-f complex","type":"exact"},{"name":"cyt b6/f complex","type":"exact"},{"name":"cyt b6f complex","type":"exact"},{"name":"cytochrome b(6)f complex","type":"exact"},{"name":"cytochrome b6-f complex","type":"exact"},{"name":"cytochrome b6/f complex","type":"exact"}],"termid":"GO:0009512"}


id: PBO:0067970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 272","termid":"PBO:0067970"}


id: PBO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication pre-initiation complex subunit Sld3","termid":"PBO:0000386"}


id: GO:1904296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of osmolarity-sensing cation channel activity","termid":"GO:1904295"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of osmolarity-sensing cation channel activity","synonyms":[{"name":"down regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"down-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"downregulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"inhibition of osmolarity-sensing cation channel activity","type":"narrow"}],"termid":"GO:1904296"}


id: PATO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilaginous","termid":"PATO:0001449"}


id: GO:0016623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor","secondary_identifiers":["EC:1.2.3.-"],"termid":"GO:0016623"}


id: PBO:0066879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 179","termid":"PBO:0066879"}


id: GO:0042286
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-4-amino-5-oxopentanoate = 5-aminolevulinate.","definition_xrefs":["EC:5.4.3.8","RHEA:14265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R02272","MetaCyc:GSAAMINOTRANS-RXN"],"synonyms":[{"name":"(S)-4-amino-5-oxopentanoate 4,5-aminomutase activity","type":"related"},{"name":"glutamate-1-semialdehyde aminotransferase activity","type":"related"}],"termid":"GO:0042286"}


id: PBO:0012525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_division_of","termid":"PBO:0012525"}


id: GO:1902967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a mitotic spindle midzone.","definition_xrefs":["GOC:TermGenie","PMID:16824200","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to mitotic spindle","termid":"GO:1902480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to mitotic spindle midzone","synonyms":[{"name":"protein localisation in mitotic spindle midzone","type":"exact"},{"name":"protein localisation to mitotic spindle midzone","type":"exact"},{"name":"protein localization in mitotic spindle midzone","type":"exact"}],"termid":"GO:1902967"}


id: PBO:0052272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4F","termid":"PBO:0052272"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: PBO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2A1 antisense RNA 1","termid":"PBO:0061949"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently wih ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: PBO:0059102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 2","termid":"PBO:0059102"}


id: PBO:0038927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL1 antisense RNA 1","termid":"PBO:0038927"}


id: PR:O94270
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ER lumen protein-retaining receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER lumen protein-retaining receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.22","secondary_identifiers":["UniProtKB:O94270"],"synonyms":[{"name":"SPBP8B7.22","type":"related"},{"name":"Spom972h-KDELR1","type":"exact"}],"termid":"PR:O94270"}


id: PBO:0091756
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2049892delT","termid":"PBO:0091756"}


id: GO:0120291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of mitotic recombination-dependent replication fork processing. Suppression of recombination at replication forks is necessary to prevent template switching.","definition_xrefs":["GOC:mah","GOC:krc","PMID:28586299","PMID:31149897","PMID:30667359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitotic recombination-dependent replication fork processing","termid":"GO:1903221"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of mitotic recombination-dependent replication fork processing","synonyms":[{"name":"maintenance of template fidelity during replication fork processing","type":"exact"},{"name":"negative regulation of mitotic recombination involved in replication fork processing","type":"related"},{"name":"negative regulation of template switch recombination involved in replication fork processing","type":"exact"},{"name":"suppression of template switching during replication fork processing","type":"exact"}],"termid":"GO:0120291"}


id: GO:0009235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"cobalamin metabolic process","synonyms":[{"name":"cobalamin metabolism","type":"exact"},{"name":"vitamin B12 metabolic process","type":"exact"},{"name":"vitamin B12 metabolism","type":"exact"},{"name":"vitamin B12 reduction","type":"narrow"}],"termid":"GO:0009235"}


id: PBO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Vps3 (predicted)","termid":"PBO:0005152"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:22995177","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase activity","termid":"GO:0045859"},{"relation_name":"is_a","term_name":"regulation of cell cycle","termid":"GO:0051726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of cyclin-dependent protein kinase activity","termid":"GO:1904029"}


id: PBO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor","termid":"PBO:0060875"}


id: PBO:0060285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 2","termid":"PBO:0060285"}


id: PBO:0057274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mir-497-195 cluster host gene","termid":"PBO:0057274"}


id: PBO:0005286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ipi1 (predicted)","termid":"PBO:0005286"}


id: PBO:0067202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 267, pseudogene","termid":"PBO:0067202"}


id: PBO:0082716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA4 histone acetyltransferase complex; acts as a platform for assembly of NuA4 subunits into the native complex; required for initiation of pre-meiotic DNA replication, likely due to its requirement for expression of IME1","termid":"PBO:0082716"}


id: PBO:0083566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF DNF2/YDR093W","termid":"PBO:0083566"}


id: PBO:0080363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 18 pseudogene","termid":"PBO:0080363"}


id: PBO:0054901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2315","termid":"PBO:0054901"}


id: GO:0035958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the glyoxylate cycle by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:11024040","PMID:17875938","PMID:19686338","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glyoxylate cycle by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035958)","synonyms":[{"name":"regulation of glyoxylate bypass by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glyoxylate bypass by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glyoxylate cycle by regulation of transcription from Pol II promoter","type":"related"}],"termid":"GO:0035958"}


id: GO:0006956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation","synonyms":[{"name":"complement activity","type":"related"},{"name":"complement cascade","type":"exact"},{"name":"complement response","type":"exact"}],"termid":"GO:0006956"}


id: GO:0030272
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72463],"is_not":false,"summary":null,"term":"GO:0030272"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formyltetrahydrofolate + ATP = 5,10-methenyltetrahydrofolate + ADP + H+ + phosphate.","definition_xrefs":["EC:6.3.3.2","RHEA:10488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0019006","KEGG_REACTION:R02301","MetaCyc:5-FORMYL-THF-CYCLO-LIGASE-RXN","Reactome:R-HSA-6801342"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase activity","type":"related"},{"name":"5-Formyltetrahydrofolate cyclodehydrase activity","type":"related"},{"name":"5-formyltetrahydrofolate cyclo-ligase (ADP-forming)","type":"related"},{"name":"5-formyltetrahydrofolate cyclodehydrase","type":"broad"},{"name":"formyltetrahydrofolic cyclodehydrase activity","type":"related"},{"name":"methenyl-THF synthetase activity","type":"related"}],"termid":"GO:0030272","terms_by_termid":{"GO:0030272":null}}


id: PBO:0038399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of,_negative_effect","termid":"PBO:0038399"}


id: FYPO:0001715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of succinate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal succinate import","synonyms":[{"name":"abnormal succinate import across plasma membrane","type":"exact"},{"name":"abnormal succinate import during mitotic cell cycle","type":"related"},{"name":"abnormal succinate import during vegetative growth","type":"exact"},{"name":"abnormal succinate import into cell","type":"exact"},{"name":"abnormal succinate uptake","type":"exact"},{"name":"abnormal succinic acid import","type":"related"}],"termid":"FYPO:0001715"}


id: GO:0070150
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72729],"is_not":false,"summary":null,"term":"GO:0070150"}]},"cv_name":"biological_process","definition":"The process of coupling glycine to glycyl-tRNA in a mitochondrion, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycyl-tRNA aminoacylation","termid":"GO:0006426"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0010467","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"mitochondrial glycyl-tRNA aminoacylation","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0070150","terms_by_termid":{"GO:0070150":null}}


id: PBO:0053452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 400","termid":"PBO:0053452"}


id: GO:2000278
data:
  {"annotated_genes":["SJAG_02194","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[75996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of DNA anabolism","type":"exact"},{"name":"regulation of DNA biosynthesis","type":"exact"},{"name":"regulation of DNA formation","type":"exact"},{"name":"regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000278","terms_by_termid":{"GO:0032210":null,"GO:1904332":null}}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: PBO:0044692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDRGK domain containing 1","termid":"PBO:0044692"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: GO:0102990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(pentadeca-8,11,14-trien-1-yl)resorcinol + S-adenosyl-L-methionine = H+ + 5-(pentadeca-8,11,14-trien-1-yl)resorcinol monomethyl ether + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"5-n-alk(en)ylresorcinol O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9619","RHEA:26325"],"termid":"GO:0102990"}


id: PBO:0030516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_4-nitroquinoline_N-oxide","termid":"PBO:0030516"}


id: PBO:0002849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halotolerence protein 4","termid":"PBO:0002849"}


id: PBO:0054014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1344","termid":"PBO:0054014"}


id: PR:Q92340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C1F8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.02c","synonyms":[{"name":"Spom972h-shu1","type":"exact"}],"termid":"PR:Q92340"}


id: FYPO:0002473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to double-strand break site","synonyms":[{"name":"abnormal protein localisation to double-strand break site","type":"exact"},{"name":"abnormal protein localization to DSB site","type":"exact"},{"name":"abnormal protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"abnormal protein localization to site of double-strand break","type":"exact"}],"termid":"FYPO:0002473"}


id: PBO:0075076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 126","termid":"PBO:0075076"}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: PBO:0042986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 1","termid":"PBO:0042986"}


id: PBO:0059514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded minor H-strand promoter","termid":"PBO:0059514"}


id: GO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal DNA.","definition_xrefs":["PMID:11898023"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation (obsolete GO:0010216)","synonyms":[{"name":"maintenance of DNA methylation","type":"broad"}],"termid":"GO:0010216"}


id: GO:0050284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + sinapate = UDP + 1-sinapoyl-D-glucose.","definition_xrefs":["EC:2.4.1.120","MetaCyc:SINAPATE-1-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sinapate 1-glucosyltransferase activity","secondary_identifiers":["RHEA:13305"],"synonyms":[{"name":"UDP-glucose:sinapate D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:sinapate D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:sinapic acid glucosyltransferase activity","type":"related"},{"name":"uridine 5'-diphosphoglucose-hydroxycinnamic acid acylglucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-sinapate glucosyltransferase activity","type":"related"}],"termid":"GO:0050284"}


id: GO:1901378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of organic heteropentacyclic compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic heteropentacyclic compound metabolic process","termid":"GO:1901376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic heteropentacyclic compound biosynthetic process","synonyms":[{"name":"organic heteropentacyclic compound anabolism","type":"exact"},{"name":"organic heteropentacyclic compound biosynthesis","type":"exact"},{"name":"organic heteropentacyclic compound formation","type":"exact"},{"name":"organic heteropentacyclic compound synthesis","type":"exact"}],"termid":"GO:1901378"}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: PBO:0071605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 23","termid":"PBO:0071605"}


id: PBO:0072273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 2","termid":"PBO:0072273"}


id: GO:0034787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydro-1,1a-dihydroxy-9-fluorenone + H2O = 2,3-dihydroxy-2'-carboxybiphenyl + 3 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1-hydro-1,1a-dihydroxy-9-fluorenone dehydrogenase activity","termid":"GO:0034787"}


id: GO:0007363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes encoding transcription factors at the anterior and posterior ends of an insect embryo by a combination of maternal regulatory signals and interactions among themselves; exemplified by the activation of expression of the Drosophila tailless and huckebein genes.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of terminal gap gene transcription (obsolete GO:0007363)","synonyms":[{"name":"activation of terminal gap gene","type":"broad"},{"name":"activation of terminal gap gene transcription","type":"narrow"},{"name":"stimulation of terminal gap gene transcription","type":"narrow"},{"name":"up regulation of terminal gap gene transcription","type":"exact"},{"name":"up-regulation of terminal gap gene transcription","type":"exact"},{"name":"upregulation of terminal gap gene transcription","type":"exact"}],"termid":"GO:0007363"}


id: PBO:0026893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_nitrogen_starvation","termid":"PBO:0026893"}


id: PBO:0085189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0085189"}


id: GO:0000196
data:
  {"annotated_genes":["SJAG_02392","SJAG_01114","SJAG_03753","SJAG_01181","SJAG_04825","SJAG_04551","SJAG_05000","SJAG_04522","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87902,97604,106249],"is_not":false,"summary":null,"term":"GO:0000196"},{"annotations":[99237,102973,113385,91432,102412,94951],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"}]},"cv_name":"biological_process","definition":"A MAPK cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["PMID:9561267","PMID:15944456","PMID:26945038","PMID:17604854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stress-activated MAPK cascade","termid":"GO:0051403"},{"relation_name":"part_of","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_01181":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03753":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0071554"],"is_obsolete":false,"name":"cell wall integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"Mpk1 cascade","type":"narrow"},{"name":"PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"Slt2 cascade","type":"narrow"},{"name":"cell integrity MAPK pathway","type":"exact"},{"name":"cell wall biogenesis, MAPKKK cascade","type":"exact"}],"termid":"GO:0000196","terms_by_termid":{"GO:0000196":null,"GO:1903138":null}}


id: PATO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000800 muscle strength value (obsolete PATO:0000800)","termid":"PATO:0000800"}


id: GO:0043145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The endonucleolytic cleavage of snoRNA 3' ends, which is required for mature snoRNAs to be functional.","definition_xrefs":["PMID:12773397","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016074"],"is_obsolete":false,"name":"sno(s)RNA 3'-end cleavage","synonyms":[{"name":"sRNA 3'-end cleavage","type":"narrow"},{"name":"sno(s)RNA 3' end cleavage","type":"exact"},{"name":"snoRNA 3'-end cleavage","type":"narrow"}],"termid":"GO:0043145"}


id: GO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneocyte over time, from its formation to the mature structure. A corneocyte is the last stage of development of a keratinocyte where the keratinocyte flattens, loses its nucleus and eventually delaminates from the epidermis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"keratinocyte development","termid":"GO:0003334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneocyte development","termid":"GO:0003335"}


id: PBO:0072883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF1 pseudogene 2","termid":"PBO:0072883"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_03844","SJAG_01987","SJAG_05351","SJAG_02618","SJAG_02276","SJAG_00811","SJAG_03775","SJAG_01416","SJAG_00476","SJAG_00581","SJAG_02721","SJAG_04467","SJAG_05287","SJAG_00392","SJAG_00691","SJAG_01075","SJAG_03227","SJAG_01231","SJAG_00450","SJAG_04939","SJAG_02766","SJAG_04186","SJAG_04039","SJAG_00964","SJAG_03013","SJAG_03627"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84294,106709],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[109886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[73943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004067"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[106349,77319,89051,76471,105703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[107365,99624,104789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[99625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[104790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[104791,92782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[59267,95832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043864"},{"annotations":[70791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[85777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[109631,99629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[76348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[104933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[72206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[100146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[77686,67757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[77688,77419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[87428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01075":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null,"SJAG_05351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:3.5.1.-","Reactome:R-HSA-9673054","Reactome:R-HSA-9673053"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004067":null,"GO:0004099":null,"GO:0004359":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0043864":null,"GO:0046969":null,"GO:0046970":null,"GO:0050152":null,"GO:0070773":null,"GO:1990162":null}}


id: GO:0061300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature development","termid":"GO:0061300"}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: GO:2000063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"positively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ureter smooth muscle cell differentiation","termid":"GO:2000063"}


id: PBO:0076274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 2","termid":"PBO:0076274"}


id: GO:0009419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pointed extremity furthest from the cell of a pilus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pilus tip","synonyms":[{"name":"fimbrial tip","type":"exact"}],"termid":"GO:0009419"}


id: PATO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000483 tactile hyperresponsive (obsolete PATO:0000483)","termid":"PATO:0000483"}


id: PBO:0043334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR like membrane protein","termid":"PBO:0043334"}


id: PBO:0029364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methylation","termid":"PBO:0029364"}


id: GO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.","definition_xrefs":["EC:5.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"steroid delta-isomerase activity","secondary_identifiers":["Reactome:R-HSA-193073","RHEA:14709","Reactome:R-HSA-6807052","Reactome:R-HSA-193052","Reactome:R-HSA-193961","Reactome:R-HSA-195690","MetaCyc:STEROID-DELTA-ISOMERASE-RXN"],"synonyms":[{"name":"3-oxosteroid delta5-delta4-isomerase activity","type":"related"},{"name":"3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-keto steroid isomerase activity","type":"related"},{"name":"delta(5)-3-ketosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-steroid isomerase activity","type":"related"},{"name":"delta5(or delta4)-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-ketosteroid isomerase activity","type":"related"},{"name":"delta5-3-oxosteroid isomerase activity","type":"related"},{"name":"delta5-ketosteroid isomerase activity","type":"related"},{"name":"delta5-steroid isomerase activity","type":"related"},{"name":"hydroxysteroid isomerase activity","type":"related"},{"name":"steroid D-isomerase activity","type":"exact"},{"name":"steroid isomerase activity","type":"related"}],"termid":"GO:0004769"}


id: PBO:0016967
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin Related Protein","termid":"PBO:0016967"}


id: PBO:0068249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N1","termid":"PBO:0068249"}


id: GO:0048203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the trans-Golgi to the endosome.","definition_xrefs":["PMID:10219233","GOC:jid","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"Golgi to endosome transport","termid":"GO:0006895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"vesicle targeting, trans-Golgi to endosome","synonyms":[{"name":"trans-Golgi to endosome targeting","type":"exact"}],"termid":"GO:0048203"}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03491","PANTHER:PTHR21528:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: PBO:0073287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 8","termid":"PBO:0073287"}


id: GO:1902173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:TermGenie","PMID:18938133","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte apoptotic process","termid":"GO:1902172"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"negatively_regulates","term_name":"keratinocyte apoptotic process","termid":"GO:0097283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte apoptotic process","synonyms":[{"name":"down regulation of keratinocyte apoptosis","type":"narrow"},{"name":"down regulation of keratinocyte apoptotic process","type":"exact"},{"name":"down-regulation of keratinocyte apoptosis","type":"narrow"},{"name":"down-regulation of keratinocyte apoptotic process","type":"exact"},{"name":"downregulation of keratinocyte apoptosis","type":"narrow"},{"name":"downregulation of keratinocyte apoptotic process","type":"exact"},{"name":"inhibition of keratinocyte apoptosis","type":"narrow"},{"name":"inhibition of keratinocyte apoptotic process","type":"narrow"},{"name":"negative regulation of keratinocyte apoptosis","type":"narrow"}],"termid":"GO:1902173"}


id: PBO:0056528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 5 receptor","termid":"PBO:0056528"}


id: PBO:0054354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1747","termid":"PBO:0054354"}


id: PBO:0063236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 1","termid":"PBO:0063236"}


id: GO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont organism modulates the frequency, rate or extent of vacuole organization in its host organism.","definition_xrefs":["PMID:25139904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host vacuole organization","synonyms":[{"name":"modulation by symbiont of host vacuole biogenesis","type":"related"},{"name":"modulation by symbiont of host vacuole organisation","type":"exact"},{"name":"modulation by symbiont of host vacuole organization","type":"exact"},{"name":"modulation of host vacuole organization by symbiont","type":"exact"},{"name":"regulation by symbiont of host vacuole organization","type":"exact"}],"termid":"GO:0044075"}


id: FYPO:0007927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to dihydrocoumarin. Cells stop growing (and may die) at a concentration of dihydrocoumarin that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to dihydrocoumarin","synonyms":[{"name":"sensitive to dihydrocoumarin during vegetative growth","type":"exact"}],"termid":"FYPO:0007927"}


id: PBO:0031396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_localization","termid":"PBO:0031396"}


id: PBO:0040248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4C cysteine peptidase","termid":"PBO:0040248"}


id: PBO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 14","termid":"PBO:0050390"}


id: PBO:0028192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_DNA_replication_initiation","termid":"PBO:0028192"}


id: PBO:0017627
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not a DNA polymerase delta subunit as initially detected in PMID:9326594","termid":"PBO:0017627"}


id: GO:0019845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of a toxin formed by a microorganism and secreted into the surrounding medium.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete exotoxin activity (obsolete GO:0019845)","synonyms":[{"name":"exotoxin activity","type":"exact"}],"termid":"GO:0019845"}


id: PBO:0031044
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_substance_in_growth_medium","termid":"PBO:0031044"}


id: GO:0061627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-L-methionine + L-homocysteine = 2 L-methionine + H+.","definition_xrefs":["EC:2.1.1.10","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"S-methylmethionine-homocysteine S-methyltransferase activity","secondary_identifiers":["MetaCyc:MMUM-RXN","Reactome:R-HSA-5696838","RHEA:26337"],"synonyms":[{"name":"S-methylmethionine homocysteine transmethylase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"},{"name":"methylmethionine:homocysteine methyltransferase activity","type":"related"}],"termid":"GO:0061627"}


id: PBO:0034043
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-allelopath_of","termid":"PBO:0034043"}


id: PBO:0039948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 1","termid":"PBO:0039948"}


id: GO:0062059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a FACT complex.","definition_xrefs":["PMID:10682845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FACT complex binding","termid":"GO:0062059"}


id: PBO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ACN9 family protein (predicted)","termid":"PBO:0003851"}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: GO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a pyramidal cell, that carries efferent (outgoing) action potentials from the cell body in cerebral cortex layer V towards target cells in the gray matter of the spinal cord. This axonal process is a member of those that make up the corticospinal tract.","definition_xrefs":["PMID:9878731","GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal tract morphogenesis","synonyms":[{"name":"CST axonogenesis","type":"exact"},{"name":"corticospinal tract axonogenesis","type":"exact"}],"termid":"GO:0021957"}


id: GO:1905272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GO_REF:0000059","GOC:als","GOC:TermGenie","PMID:21106936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ligase activity","termid":"GO:0051352"},{"relation_name":"is_a","term_name":"regulation of proton-transporting ATP synthase activity, rotational mechanism","termid":"GO:1905271"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"down regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"down-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"down-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"down-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"down-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"downregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"downregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"downregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"downregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"inhibition of H+-transporting ATP synthase activity","type":"narrow"},{"name":"inhibition of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"inhibition of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"inhibition of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"inhibition of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"negative regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"negative regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"negative regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"negative regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"}],"termid":"GO:1905272"}


id: PBO:0086185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; essential for cell wall remodeling during growth; localized to sites of polarized growth and the mother-daughter bud neck; homolog of the alpha, beta, and gamma isoforms of mammalian protein kinase C (PKC)","termid":"PBO:0086185"}


id: GO:0036455
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112952],"is_not":false,"summary":null,"term":"GO:0036455"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a iron-sulfur cluster from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring sulphur-containing groups","termid":"GO:0016782"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"iron-sulfur transferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2564828"],"synonyms":[{"name":"Fe-S transferase activity","type":"exact"}],"termid":"GO:0036455","terms_by_termid":{"GO:0036455":null}}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: GO:0031117
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97318],"is_not":false,"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of microtubule depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of microtubule polymerization or depolymerization","termid":"GO:0031112"},{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"microtubule depolymerization","termid":"GO:0007019"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of microtubule depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of microtubule depolymerization","type":"narrow"},{"name":"microtubule destabilization","type":"exact"},{"name":"positive regulation of microtubule catastrophe","type":"narrow"},{"name":"positive regulation of microtubule disassembly","type":"exact"},{"name":"stimulation of microtubule depolymerization","type":"narrow"},{"name":"up regulation of microtubule depolymerization","type":"exact"},{"name":"up-regulation of microtubule depolymerization","type":"exact"},{"name":"upregulation of microtubule depolymerization","type":"exact"}],"termid":"GO:0031117","terms_by_termid":{"GO:0031117":null}}


id: PBO:0084967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase; plays a catalytic role in oxidation of cytoplasmic one-carbon units; expression is regulated by Bas1p and Bas2p, repressed by adenine, and may be induced by inositol and choline","termid":"PBO:0084967"}


id: PBO:0064622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 2","termid":"PBO:0064622"}


id: GO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The net movement of nuclei towards one another, leading to the bilateral transfer of genetic material in organisms undergoing conjugation without cellular fusion.","definition_xrefs":["GOC:mah","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"karyogamy involved in conjugation with mutual genetic exchange","termid":"GO:0000744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with mutual genetic exchange","synonyms":[{"name":"nuclear exchange during conjugation without cellular fusion","type":"related"},{"name":"nuclear migration involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000745"}


id: PBO:0110347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5RAP3 pseudogene 1","termid":"PBO:0110347"}


id: SO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of TNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"TNA","termid":"SO:0001190"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Threose_nucleic_acid"],"synonyms":[{"name":"TNA oligo","type":"exact"},{"name":"threose nucleic acid","type":"exact"}],"termid":"SO:0001191"}


id: PBO:0004822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase complex subunit Mak10 (predicted)","termid":"PBO:0004822"}


id: GO:0034462
data:
  {"annotated_genes":["SJAG_04524","SJAG_01169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72778,108303],"is_not":false,"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a small-subunit processome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic small ribosomal subunit assembly","termid":"GO:0180025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"small-subunit processome assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"SSU processome assembly","type":"exact"},{"name":"small subunit processome assembly","type":"exact"}],"termid":"GO:0034462","terms_by_termid":{"GO:0034462":null}}


id: PBO:0059059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A pseudogene 2","termid":"PBO:0059059"}


id: PBO:0090486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1","termid":"PBO:0090486"}


id: PBO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup131","termid":"PBO:0090453"}


id: PBO:0069588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 862, pseudogene","termid":"PBO:0069588"}


id: PBO:0067151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 201, pseudogene","termid":"PBO:0067151"}


id: PBO:0058374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4746","termid":"PBO:0058374"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: PBO:0039245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member B1","termid":"PBO:0039245"}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: PBO:0017994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Mde4","termid":"PBO:0017994"}


id: GO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"testosterone biosynthetic process","termid":"GO:0061370"}


id: FYPO:0001340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which a cellular response to oxidative stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to oxidative stress during vegetative growth","synonyms":[{"name":"abnormal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"abnormal oxidative stress response during vegetative growth","type":"exact"}],"termid":"FYPO:0001340"}


id: PBO:0034325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_before","termid":"PBO:0034325"}


id: FYPO:0007749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the localization of a protein to the spindle is decreased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle during meiosis I","type":"exact"},{"name":"decreased protein localization to meiosis I spindle","type":"exact"},{"name":"decreased protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007749"}


id: PBO:0067677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 862, pseudogene","termid":"PBO:0067677"}


id: PR:Q9P776
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1711.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.15c","synonyms":[{"name":"Spom972h-SPBC1711.15c","type":"exact"}],"termid":"PR:Q9P776"}


id: GO:0030692
data:
  {"annotated_genes":["SJAG_03654","SJAG_00838"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72441,77588],"is_not":false,"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with precursors of the eukaryotic small ribosomal subunit, including the 90S preribosome; involved in small subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, small subunit precursor","termid":"GO:0030688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_03654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0030684"],"is_obsolete":false,"name":"Noc4p-Nop14p complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"Nop7 complex","type":"exact"},{"name":"Nop7 subcomplex","type":"exact"}],"termid":"GO:0030692","terms_by_termid":{"GO:0030692":null}}


id: GO:0102824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: quercetin-7-olate + UDP-L-rhamnose = H+ + quercetin 3-O-rhamnoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-L-rhamnose:quercetin 3-O-rhamnosyltransferase activity","secondary_identifiers":["RHEA:61160","MetaCyc:RXN-8267"],"termid":"GO:0102824"}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: PBO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-destabilized_iron-sulfur_cluster_binding","termid":"PBO:0030494"}


id: PATO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering to a bearer by virtue of the bearer's being at the point or short after birth.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal","termid":"PATO:0002206"}


id: GO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a lipopolysaccharide and transmitting the signal across the cell membrane to initiate an innate immune response. Lipopolysaccharides (LPS) are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["PMID:15379975","PMID:14609719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipopolysaccharide immune receptor activity","synonyms":[{"name":"LPS receptor activity","type":"exact"},{"name":"endotoxin receptor activity","type":"broad"},{"name":"lipopolysaccharide receptor activity","type":"broad"}],"termid":"GO:0001875"}


id: GO:0010424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent transfer of a methyl group to C-5 or N-4 of a cytosine located within a CG sequence in a DNA molecule.","definition_xrefs":["GOC:tb","GOC:dph","PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA methylation on cytosine","termid":"GO:0032776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA methylation on cytosine within a CG sequence","synonyms":[{"name":"cytosine methylation within a CG sequence","type":"exact"}],"termid":"GO:0010424"}


id: GO:0010684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tricyclic triterpenoid compounds, terpenoids with six isoprene units and 3 rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid catabolic process","synonyms":[{"name":"tricyclic triterpenoid catabolism","type":"exact"}],"termid":"GO:0010684"}


id: PATO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red","termid":"PATO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated red","synonyms":[{"name":"pale red","type":"exact"}],"termid":"PATO:0001284"}


id: GO:0000379
data:
  {"annotated_genes":["SJAG_04907","SJAG_01260","SJAG_00754","SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71584,72608,73584,77719],"is_not":false,"summary":null,"term":"GO:0000379"}]},"cv_name":"biological_process","definition":"RNA processing that begins when the tertiary structure of a tRNA type intron is recognized, and ends when the endonucleolytic cleavage of the RNA at both the 5' and 3' splice sites occurs.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA processing","termid":"GO:0034470"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA-type intron splice site recognition and cleavage","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000379","terms_by_termid":{"GO:0000379":null}}


id: PBO:0043898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 2","termid":"PBO:0043898"}


id: GO:0032238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of adenosine, adenine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"adenosine transport","termid":"GO:0032238"}


id: PBO:0081066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DBF-type containing 2","termid":"PBO:0081066"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["UniProtKB:Q9P3U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: PBO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 5, Pup2 (predicted)","termid":"PBO:0002284"}


id: PBO:0044711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 2","termid":"PBO:0044711"}


id: PBO:0090057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 regulatory subunit Glc8","termid":"PBO:0090057"}


id: PBO:0070576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 42","termid":"PBO:0070576"}


id: FYECO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Pantothenate was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate absent","termid":"FYECO:0000187"}


id: GO:0005249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity","secondary_identifiers":["Reactome:R-HSA-9659554","Reactome:R-HSA-9667761","Reactome:R-HSA-1296127"],"synonyms":[{"name":"voltage gated potassium channel activity","type":"exact"},{"name":"voltage-dependent potassium channel activity","type":"exact"},{"name":"voltage-gated potassium ion channel activity","type":"exact"},{"name":"voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:0005249"}


id: PBO:0025453
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast cancer","termid":"PBO:0025453"}


id: FYPO:0007225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is normal (i.e. indistinguishable from wild type). Small RNA-mediated heterochromatin assembly results in transcriptional silencing.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal heterochromatin assembly by small RNA","synonyms":[{"name":"normal RNAi-mediated chromatin silencing","type":"exact"},{"name":"normal chromatin silencing by small RNA","type":"exact"},{"name":"normal heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly by small RNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007225"}


id: GO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gonadotropin-releasing hormone to initiate a change in cell activity. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor activity","synonyms":[{"name":"GnRH receptor activity","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor activity","type":"exact"}],"termid":"GO:0004968"}


id: MOD:00923
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cy5 CyDye DIGE Fluor saturation dye","synonyms":[{"name":"Cy5 CyDye DIGE Fluor saturation dye","type":"related"},{"name":"CyDye-Cy5","type":"related"}],"termid":"MOD:00923"}


id: SO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_right_left_motif","secondary_identifiers":["BS:00225"],"synonyms":[{"name":"nest_right_left","type":"exact"},{"name":"nest_rl","type":"exact"},{"name":"polypeptide nest right left motif","type":"exact"}],"termid":"SO:0001122"}


id: PBO:0072070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12","termid":"PBO:0072070"}


id: PBO:0064399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide kinase 3'-phosphatase","termid":"PBO:0064399"}


id: FYPO:0007443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and the protein is present in the cytosol instead.","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localization to ER membrane, with protein mislocalized to cytosol","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0007443"}


id: GO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tRNA exon ligation process in which the splice junction phosphate is derived from exogenous GTP. This type of ligation to rejoin the 5' and 3' exons of a tRNA is observed in the yeast Saccharomyces cerevisiae where the ligation reaction also produces a 2'-phosphate at the splice junction which is subsequently removed as part of the ligation process.","definition_xrefs":["GOC:krc","PMID:18217203","PMID:9299409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA exon ligation","termid":"GO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA exon ligation utilizing GTP as source of linkage phosphate","termid":"GO:0000970"}


id: PBO:0073640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 27, pseudogene","termid":"PBO:0073640"}


id: PBO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1","termid":"PBO:0052049"}


id: PBO:0053349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 239","termid":"PBO:0053349"}


id: PBO:0076467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1","termid":"PBO:0076467"}


id: PBO:0012546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 4 (predicted)","termid":"PBO:0012546"}


id: FYPO:0004460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of mitotic cell cycle RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Regulation of mitotic cell cycle RNAs are transcribed from genes whose products are involved in regulation of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of mitotic cell cycle regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased regulation of mitotic cell cycle gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004460"}


id: PATO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female receptivity","synonyms":[{"name":"high female receptivity","type":"exact"}],"termid":"PATO:0001723"}


id: PBO:0064948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PML-RARA regulated adaptor molecule 1","termid":"PBO:0064948"}


id: PBO:0065085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated catalytic subunit alpha 2","termid":"PBO:0065085"}


id: GO:1904280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24726328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase V","synonyms":[{"name":"down regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"downregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"inhibition of transcription from RNA pol V promoter","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904280"}


id: GO:0006553
data:
  {"annotated_genes":["SJAG_01574","SJAG_00234","SJAG_01630","SJAG_00502","SJAG_03163","SJAG_00869","SJAG_04688","SJAG_01061","SJAG_01955","SJAG_00881","SJAG_03312","SJAG_02388"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033512"},{"annotations":[75534,74399,76482,91925,96688,75751,92246,70447,108672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[73307,110939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009089"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lysine, 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00502":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02388":null,"SJAG_03163":null,"SJAG_03312":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lysine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Lysine"],"synonyms":[{"name":"lysine metabolism","type":"exact"}],"termid":"GO:0006553","terms_by_termid":{"GO:0009089":null,"GO:0019878":null,"GO:0033512":null}}


id: PBO:0040986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOK antisense RNA 1","termid":"PBO:0040986"}


id: GO:0009715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chalcone, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"chalcone metabolic process","termid":"GO:0009714"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"chalcone biosynthetic process","synonyms":[{"name":"chalcone anabolism","type":"exact"},{"name":"chalcone biosynthesis","type":"exact"},{"name":"chalcone formation","type":"exact"},{"name":"chalcone synthesis","type":"exact"}],"termid":"GO:0009715"}


id: GO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vasoconstriction that is triggered by vasomotor excitation resulting from the detection of high carbon dioxide levels in the vasomotor center of the central nervous system.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"},{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by ischemic conditions","termid":"GO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure","termid":"GO:0002014"}


id: PBO:0086239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes primarily to the plasma membrane; also found at the nuclear envelope; long-lived protein that is asymmetrically retained in the plasma membrane of mother cells; the authentic, non-tagged protein is detected in mitochondria in a phosphorylated state; null mutation confers sensitivity to acetic acid","termid":"PBO:0086239"}


id: GO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to laminin 5.","definition_xrefs":["GOC:mah","PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha6-beta4 integrin-laminin 5 complex","synonyms":[{"name":"ITGA6-ITGB4-LAMA5 complex","type":"narrow"},{"name":"alpha6-beta4 integrin-laminin-332 complex","type":"exact"}],"termid":"GO:0070334"}


id: PBO:0064165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVC","termid":"PBO:0064165"}


id: PBO:0091652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amf1","termid":"PBO:0091652"}


id: GO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transport","synonyms":[{"name":"glucosylglycerol transport","type":"broad"}],"termid":"GO:0051475"}


id: PBO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mde7","termid":"PBO:0005030"}


id: PBO:0075470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 20 pseudogene 1","termid":"PBO:0075470"}


id: PBO:0053580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 603","termid":"PBO:0053580"}


id: PBO:0052478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 4","termid":"PBO:0052478"}


id: GO:0001906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism that results in the killing of its own cells or those of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell killing","synonyms":[{"name":"necrosis","type":"related"}],"termid":"GO:0001906"}


id: PBO:0030264
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N,N'-(p-xylylidene)bis-aminoguanidine_2HCl","termid":"PBO:0030264"}


id: GO:0106355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:19473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NADH] activity","termid":"GO:0106355"}


id: PBO:0091570
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Light Intermediate chain","termid":"PBO:0091570"}


id: PBO:0030968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030968"}


id: PBO:0041062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain testis associated pseudogene 1","termid":"PBO:0041062"}


id: PBO:0048988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 1","termid":"PBO:0048988"}


id: PBO:0071746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 2","termid":"PBO:0071746"}


id: GO:0048627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast development","termid":"GO:0048627"}


id: GO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a iC3b product of the complement cascade.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin binding","termid":"GO:0001846"},{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"complement component iC3b binding","termid":"GO:0001852"}


id: GO:0065010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Organized structure of distinctive morphology and function, bounded by a lipid bilayer membrane and occurring outside the cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"extracellular organelle","termid":"GO:0043230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"extracellular membrane-bounded organelle","synonyms":[{"name":"extracellular membrane-enclosed organelle","type":"exact"}],"termid":"GO:0065010"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: PBO:0084458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase, involved in N-linked glycosylation; catalyzes the transfer of both the seventh mannose residue on B-arm and ninth mannose residue on the C-arm from Dol-P-Man to lipid-linked oligosaccharides; human homolog ALG9 can complement yeast null mutant; mutation of human homolog causes type 1 congenital disorders of glycosylation","termid":"PBO:0084458"}


id: PBO:0057892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3196","termid":"PBO:0057892"}


id: GO:0042903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate.","definition_xrefs":["PMID:12024216","PMID:12486003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"protein lysine deacetylase activity","termid":"GO:0033558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0140096","GO:0016810","GO:0016787","GO:0019213","GO:0003674","GO:0033558","GO:0003824"],"is_obsolete":false,"name":"tubulin deacetylase activity","secondary_identifiers":["Reactome:R-HSA-5618331"],"termid":"GO:0042903"}


id: PBO:0063958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 beta","termid":"PBO:0063958"}


id: GO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acyl-carrier protein.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-carrier-protein biosynthetic process (obsolete GO:0042967)","synonyms":[{"name":"ACP biosynthesis","type":"exact"},{"name":"ACP biosynthetic process","type":"exact"},{"name":"acyl carrier protein biosynthesis","type":"exact"},{"name":"acyl carrier protein biosynthetic process","type":"exact"},{"name":"acyl-carrier protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein anabolism","type":"exact"},{"name":"acyl-carrier-protein biosynthesis","type":"exact"},{"name":"acyl-carrier-protein formation","type":"exact"},{"name":"acyl-carrier-protein synthesis","type":"exact"}],"termid":"GO:0042967"}


id: PBO:0077448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 181","termid":"PBO:0077448"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PBO:0091709
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ask2 is the name which was given to the spurious ORF on the opposite strand","termid":"PBO:0091709"}


id: GO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving galactose that modulates the frequency, rate or extent or transcription.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"regulation of transcription by galactose","termid":"GO:0000409"}


id: PBO:0070565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 31","termid":"PBO:0070565"}


id: PBO:0017986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid transmembrane transporter Fnx1","termid":"PBO:0017986"}


id: PBO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase (predicted)","termid":"PBO:0001802"}


id: GO:0075298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygospore formation, a process in which a thick-walled spore of some algae and fungi is formed by union of two similar sexual cells, usually serves as a resting spore, and produces the sporophytic phase.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"regulates","term_name":"zygospore formation","termid":"GO:0034296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of zygospore formation","termid":"GO:0075298"}


id: GO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O.","definition_xrefs":["PMID:14653780","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4,4-dimethyl-9beta,19-cyclopropylsterol oxidation","synonyms":[{"name":"4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080064"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: GO:0061908
data:
  {"annotated_genes":["SJAG_00059","SJAG_03851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103975,105942],"is_not":false,"summary":null,"term":"GO:0061908"}]},"cv_name":"cellular_component","definition":"A disk-like structure that expands, rounds up into a cup-shaped structure, and eventually closes around its cargo (for example cytoplasmic components) to become an autophagosome or Cvt vesicle.","definition_xrefs":["PMID:22664348","PMID:24201109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_03851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phagophore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isolation membrane","type":"related"}],"termid":"GO:0061908","terms_by_termid":{"GO:0061908":null}}


id: GO:0018570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: p-cumate + NADH + H+ + O2 = NAD+ + cis-2,3-dihydroxy-2,3-dihydro-p-cumate.","definition_xrefs":["RHEA:42344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"p-cumate 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:RXN-664","UM-BBD_reactionID:r0395","EC:1.14.12.25"],"termid":"GO:0018570"}


id: PBO:0044070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin A","termid":"PBO:0044070"}


id: PATO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The frequency of transmitted vibrations.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound frequency","termid":"PATO:0001520"}


id: PBO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein Spo15","termid":"PBO:0000492"}


id: PBO:0073764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 3 member 2","termid":"PBO:0073764"}


id: GO:0090310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterochromatin formation","termid":"GO:0031452"},{"relation_name":"is_a","term_name":"regulation of DNA methylation-dependent heterochromatin formation","termid":"GO:0090308"},{"relation_name":"negatively_regulates","term_name":"DNA methylation-dependent heterochromatin formation","termid":"GO:0006346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA methylation-dependent heterochromatin formation","synonyms":[{"name":"negative regulation of DNA methylation-dependent heterochromatin assembly","type":"exact"},{"name":"negative regulation of methylation-dependent chromatin silencing","type":"broad"}],"termid":"GO:0090310"}


id: GO:0048483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands.","definition_xrefs":["GOC:jid","FMA:9905","GOC:sr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"autonomic nervous system development","termid":"GO:0048483"}


id: PATO:0000826
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000826 visual acuity value (obsolete PATO:0000826)","termid":"PATO:0000826"}


id: PBO:0038286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"average_residue_weight","termid":"PBO:0038286"}


id: GO:0071521
data:
  {"annotated_genes":["SJAG_04509","SJAG_00596","SJAG_01794","SJAG_00845","SJAG_03453","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83663,85571,86520,89096,99122,99945],"is_not":false,"summary":null,"term":"GO:0071521"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of the small GTPase Cdc42 with additional proteins. In Schizosaccharomyces the complex contains the Cdc42, Ras1, Scd1, Scd2, andShk1 proteins, and functions in the Ras1-Scd GTPase signaling pathway.","definition_xrefs":["PMID:8943016","GOC:vw","GOC:mah","PMID:10567532","PMID:7923372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_00596":null,"SJAG_00845":null,"SJAG_01794":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cdc42 GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ras1-Scd1-Scd2-Cdc42-Shk1 complex","type":"exact"}],"termid":"GO:0071521","terms_by_termid":{"GO:0071521":null}}


id: FYPO:0007501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, arrangement of constituent parts, or disassembly of the horsetail-astral microtubule array is abnormal.","definition_xrefs":["PomBase:mah","GO:0032118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during meiotic cell cycle","termid":"FYPO:0007113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal horsetail-astral microtubule organization","synonyms":[{"name":"abnormal horsetail-astral microtubule array organization","type":"exact"},{"name":"abnormal horsetail-astral microtubule organisation","type":"exact"},{"name":"abnormal horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"FYPO:0007501"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: PBO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein K","termid":"PBO:0042733"}


id: GO:0051678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan catabolic process","termid":"GO:0051678"}


id: GO:0016979
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100626],"is_not":false,"summary":null,"term":"GO:0016979"}]},"cv_name":"molecular_function","definition":"Catalysis of the lipoylation of a protein in two steps: ATP + (R)-lipoate + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP + diphosphate (overall reaction): (1) ATP + (R)-lipoate = lipoyl-AMP + diphosphate; (2) lipoyl-AMP + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP.","definition_xrefs":["PMID:17570395","RHEA:49288","PMID:16141198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016779","GO:0003674","GO:0016740","GO:0016874"],"is_obsolete":false,"name":"lipoate-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8654","GO:0008916","EC:6.3.1.20","GO:0102315","MetaCyc:RXN-13039","GO:0016978","MetaCyc:RXN0-1141","MetaCyc:RXN-8655"],"synonyms":[{"name":"lipoate-protein ligase A activity","type":"narrow"},{"name":"lipoate-protein ligase B activity","type":"narrow"},{"name":"lipoate-protein ligase activity (lipoylation of glycine cleavage complex)","type":"narrow"}],"termid":"GO:0016979","terms_by_termid":{"GO:0016979":null}}


id: GO:0019243
data:
  {"annotated_genes":["SJAG_01596","SJAG_04674","SJAG_02988","SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72524,74062,95814,98240],"is_not":false,"summary":null,"term":"GO:0019243"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.","definition_xrefs":["PMID:2198020","GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal catabolic process to lactate","termid":"GO:0061727"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02988":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PWY-5386"],"synonyms":[{"name":"D-lactate biosynthesis from methylglyoxal","type":"broad"},{"name":"D-lactate biosynthetic process from methylglyoxal","type":"broad"},{"name":"glyoxalase system","type":"related"},{"name":"methylglyoxal breakdown to D-lactate","type":"broad"},{"name":"methylglyoxal catabolism to D-lactate via S-lactoyl-glutathione","type":"exact"},{"name":"methylglyoxal degradation to D-lactate","type":"broad"},{"name":"methylglyoxal detoxification","type":"related"}],"termid":"GO:0019243","terms_by_termid":{"GO:0019243":null}}


id: GO:0003960
data:
  {"annotated_genes":["SJAG_03476"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73773],"is_not":false,"summary":null,"term":"GO:0003960"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone.","definition_xrefs":["EC:1.6.5.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor","termid":"GO:0016655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03476":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH:quinone reductase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:QOR-RXN","RHEA:14269","Reactome:R-HSA-6799722"],"synonyms":[{"name":"NADPH:quinone oxidoreductase activity","type":"related"},{"name":"quinone oxidoreductase activity","type":"broad"},{"name":"zeta-crystallin activity","type":"narrow"}],"termid":"GO:0003960","terms_by_termid":{"GO:0003960":null}}


id: PR:O74751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1734.10c gene.","definition_xrefs":["UniProtKB:O74751","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1734.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.10c","synonyms":[{"name":"Spom972h-SPBC1734.10c","type":"exact"}],"termid":"PR:O74751"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: GO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"},{"relation_name":"is_a","term_name":"organonitrogen compound catabolic process","termid":"GO:1901565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"alkaloid catabolic process","synonyms":[{"name":"alkaloid breakdown","type":"exact"},{"name":"alkaloid catabolism","type":"exact"},{"name":"alkaloid degradation","type":"exact"}],"termid":"GO:0009822"}


id: FYPO:0006604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at abnormal replication fork arrest at sites within the eukaryotic tRNA transcription unit occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"decreased replication fork arrest at tRNA locus","synonyms":[{"name":"decreased replication fork arrest at tRNA genes","type":"exact"},{"name":"decreased replication fork arrest at tRNA locus during mitotic cell cycle","type":"related"},{"name":"decreased replication fork arrest at tRNA locus during vegetative growth","type":"exact"},{"name":"reduced replication fork arrest at tRNA locus","type":"exact"}],"termid":"FYPO:0006604"}


id: PBO:0074853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 42A","termid":"PBO:0074853"}


id: GO:1904584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:20805360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to polyamine macromolecule","termid":"GO:1904583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to polyamine macromolecule","synonyms":[{"name":"cellular response to polyamine","type":"exact"},{"name":"cellular response to polyamines","type":"exact"}],"termid":"GO:1904584"}


id: GO:0044646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation in the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:20837040","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation in another organism (obsolete GO:0044646)","synonyms":[{"name":"envenomation resulting in modulation of complement activation in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation in other organism","type":"exact"}],"termid":"GO:0044646"}


id: GO:0060898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neurectodermal cells to cells of the eye field and their capacity to differentiate into eye field cells. Eye field cells are neurectodermal cells that will form the optic placode.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"},{"relation_name":"part_of","term_name":"lens placode formation involved in camera-type eye formation","termid":"GO:0046619"},{"relation_name":"part_of","term_name":"neural plate regionalization","termid":"GO:0060897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye field cell fate commitment involved in camera-type eye formation","termid":"GO:0060898"}


id: PBO:0058915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12133","termid":"PBO:0058915"}


id: PBO:0004143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase Fab1","termid":"PBO:0004143"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01455","PRO:DNx","PANTHER:PTHR15139:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: GO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA biosynthetic process that is involved in mitochondrial DNA replication.","definition_xrefs":["PMID:29931097","PMID:28408491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"},{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"},{"relation_name":"part_of","term_name":"mitochondrial DNA replication","termid":"GO:0006264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007005","GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA synthesis involved in mitochondrial DNA replication","synonyms":[{"name":"DNA biosynthetic process involved in mitochondrial DNA replication","type":"exact"}],"termid":"GO:0110166"}


id: GO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond by a metallopeptidase mechanism to release a C-terminal amino acid.","definition_xrefs":["GOC:mah","EC:3.4.17.16"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X metallocarboxypeptidase activity (obsolete GO:0031368)","synonyms":[{"name":"Pro-X metallocarboxypeptidase activity","type":"exact"},{"name":"carboxypeptidase P activity","type":"narrow"},{"name":"membrane Pro-X carboxypeptidase activity","type":"narrow"},{"name":"membrane Pro-Xaa carboxypeptidase","type":"narrow"},{"name":"microsomal carboxypeptidase activity","type":"narrow"}],"termid":"GO:0031368"}


id: PBO:0046611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K11 member 1","termid":"PBO:0046611"}


id: MOD:01207
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01207"}


id: GO:0030151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdenum ion (Mo).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"molybdenum ion binding","synonyms":[{"name":"Mo ion binding","type":"exact"},{"name":"molybdenum binding","type":"exact"}],"termid":"GO:0030151"}


id: GO:0031893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"vasopressin receptor binding","synonyms":[{"name":"vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031893"}


id: PBO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 21","termid":"PBO:0052729"}


id: PBO:0085878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; induced by ketoconazole; promoter region contains sterol regulatory element motif, which has been identified as a Upc2p-binding site; overexpression complements function of Nce102p in NCE102 deletion strain; FHN1 has a paralog, NCE102, that arose from the whole genome duplication","termid":"PBO:0085878"}


id: GO:0140500
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"reticulophagy","termid":"GO:0061709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"regulation of reticulophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ER autophagy","type":"exact"},{"name":"regulation of ER degradation","type":"related"},{"name":"regulation of ER-phagy","type":"exact"},{"name":"regulation of autophagy of the ER","type":"exact"},{"name":"regulation of autophagy of the endoplasmic reticulum","type":"exact"},{"name":"regulation of endoplasmic reticulum autophagy","type":"exact"},{"name":"regulation of endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0140500","terms_by_termid":{"GO:0140501":null}}


id: GO:0140915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a zymogen granule.","definition_xrefs":["PMID:20133611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into zymogen granule","termid":"GO:0140915"}


id: FYPO:0000452
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to chromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to chromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000452","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: PR:000050488
data:
  {"annotation_feature_type":"gene","cv_name":"protein","direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC20G8.05c","termid":"PR:000050488"}


id: PBO:0089355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-diphospho-sugar transferase, unknown specificity","termid":"PBO:0089355"}


id: PBO:0069787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1073, pseudogene","termid":"PBO:0069787"}


id: PBO:0067183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 241, pseudogene","termid":"PBO:0067183"}


id: GO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small membranous protrusion, often ending in a bulbous head and attached to the neuron by a narrow stalk or neck.","definition_xrefs":["NIF_Subcellular:sao1145756102","ISBN:0198504888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron spine","synonyms":[{"name":"spine","type":"broad"}],"termid":"GO:0044309"}


id: PBO:0055970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 2","termid":"PBO:0055970"}


id: PBO:0055636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3075","termid":"PBO:0055636"}


id: GO:1990642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a castration stimulus, deprivation of gonads.","definition_xrefs":["PMID:11255226"],"gene_count":0,"genotype_count":0,"name":"obsolete response to castration (obsolete GO:1990642)","synonyms":[{"name":"response to castration","type":"exact"}],"termid":"GO:1990642"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: GO:0018855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetate + ATP + CoA = AMP + diphosphate + 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA synthetase activity","secondary_identifiers":["RHEA:33419","EC:6.2.1.38"],"termid":"GO:0018855"}


id: GO:0048219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from one Golgi cisterna to another, mediated by small transport vesicles.","definition_xrefs":["GOC:jid","GOC:mah","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-Golgi vesicle-mediated transport","termid":"GO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"inter-Golgi cisterna vesicle-mediated transport","synonyms":[{"name":"inter-Golgi cisterna transport","type":"exact"}],"termid":"GO:0048219"}


id: PBO:0066988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 291","termid":"PBO:0066988"}


id: GO:1903679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-independent translational initiation.","definition_xrefs":["GOC:PARL","PMID:11959995","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-independent translational initiation","termid":"GO:1903677"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cap-independent translational initiation","synonyms":[{"name":"activation of cap-independent translational initiation","type":"narrow"},{"name":"up regulation of cap-independent translational initiation","type":"exact"},{"name":"up-regulation of cap-independent translational initiation","type":"exact"},{"name":"upregulation of cap-independent translational initiation","type":"exact"}],"termid":"GO:1903679"}


id: GO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of nematode larval development, the process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:kmv","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of nematode larval development","termid":"GO:0061062"},{"relation_name":"negatively_regulates","term_name":"nematode larval development","termid":"GO:0002119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development","termid":"GO:0061064"}


id: PBO:0058751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6875","termid":"PBO:0058751"}


id: SO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transgene that is floxed.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"floxed","termid":"SO:0000359"},{"relation_name":"is_a","term_name":"transgene","termid":"SO:0000902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"floxed_gene","synonyms":[{"name":"floxed gene","type":"exact"}],"termid":"SO:0000363"}


id: GO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).","definition_xrefs":["PMID:11030750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' GDP-L-fucose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-66"],"synonyms":[{"name":"'de novo' GDP-L-fucose anabolism","type":"exact"},{"name":"'de novo' GDP-L-fucose biosynthesis","type":"exact"},{"name":"'de novo' GDP-L-fucose formation","type":"exact"},{"name":"'de novo' GDP-L-fucose synthesis","type":"exact"},{"name":"GDP-L-fucose biosynthesis, de novo pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, de novo pathway","type":"exact"}],"termid":"GO:0042351"}


id: GO:0102684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + 2 NADPH + 2 O2 + 2 H+ = (E)-phenylacetaldehyde oxime + 2 NADP + 3 H2O + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.14.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-phenylalanine N-monooxygenase activity","secondary_identifiers":["RHEA:33263","MetaCyc:RXN-4602"],"termid":"GO:0102684"}


id: GO:1904869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to Cajal body.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:TermGenie","GOC:nc","PMID:25467444","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"regulates","term_name":"protein localization to Cajal body","termid":"GO:1904867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to Cajal body","synonyms":[{"name":"regulation of protein localisation in Cajal body","type":"exact"},{"name":"regulation of protein localisation to Cajal body","type":"exact"},{"name":"regulation of protein localization in Cajal body","type":"exact"}],"termid":"GO:1904869"}


id: PBO:0028006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_contraction","termid":"PBO:0028006"}


id: PBO:0047895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p22)","termid":"PBO:0047895"}


id: FYPO:0006984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript synthesized on a DNA template by RNA polymerase III is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcriptional readthrough","termid":"FYPO:0003049"},{"relation_name":"output_of","term_name":"abnormal termination of RNA polymerase III transcription","termid":"FYPO:0006983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"}],"interesting_parent_ids":["FYPO:0003048","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased transcriptional readthrough at RNA polymerase III-transcribed genes","synonyms":[{"name":"3'-extended transcript at RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length by 3' extension of RNA polymerase III-transcribed genes","type":"related"},{"name":"increased transcript length due to transcriptional readthrough at RNA polymerase III-transcribed genes","type":"exact"},{"name":"poly(A) readthrough at RNA polymerase III-transcribed genes","type":"related"}],"termid":"FYPO:0006984"}


id: PBO:0091447
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-Glucan Synthase","termid":"PBO:0091447"}


id: PR:Q7Z9I1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C188.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.09c","synonyms":[{"name":"Spom972h-pfl4","type":"exact"}],"termid":"PR:Q7Z9I1"}


id: PBO:0041997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 43","termid":"PBO:0041997"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PBO:0076427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 3","termid":"PBO:0076427"}


id: PBO:0071082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 84","termid":"PBO:0071082"}


id: GO:0075046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium formation for nutrient acquisition from host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of formation of structure involved in a symbiotic process","termid":"GO:0044149"},{"relation_name":"is_a","term_name":"regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075045"},{"relation_name":"positively_regulates","term_name":"formation of haustorium for nutrient acquisition","termid":"GO:0052094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation by symbiont of haustorium for nutrient acquisition from host","termid":"GO:0075046"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["PMID:12941942","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: PBO:0018025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDK7","termid":"PBO:0018025"}


id: GO:0003316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an myocardial progenitor cell that contributes to the formation of the heart rudiment.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"heart rudiment formation","termid":"GO:0003315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of myocardial progenitor cell apical/basal polarity","synonyms":[{"name":"myocardial progenitor epithelial polarization","type":"exact"}],"termid":"GO:0003316"}


id: PBO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint kinase Cds1","termid":"PBO:0090613"}


id: PBO:0076214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 1","termid":"PBO:0076214"}


id: GO:1905611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:bc","PMID:23409027","GOC:PARL","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of mRNA cap binding","termid":"GO:1905610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA cap binding","synonyms":[{"name":"down regulation of mRNA cap binding","type":"exact"},{"name":"down-regulation of mRNA cap binding","type":"exact"},{"name":"downregulation of mRNA cap binding","type":"exact"},{"name":"inhibition of mRNA cap binding","type":"narrow"}],"termid":"GO:1905611"}


id: GO:1903154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any glucose transmembrane transporter activity that is involved in glucose import into cell.","definition_xrefs":["GO_REF:0000061","ISBN:0-8249-3695-6","GOC:TermGenie","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose transmembrane transporter activity involved in glucose import into cell (obsolete GO:1903154)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity involved in glucose import into cell","type":"related"},{"name":"glucose permease activity involved in glucose import into cell","type":"exact"},{"name":"glucose transmembrane transporter activity involved in glucose import into cell","type":"exact"},{"name":"lactose/glucose efflux transporter activity involved in glucose import into cell","type":"narrow"}],"termid":"GO:1903154"}


id: PBO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 48","termid":"PBO:0071909"}


id: PBO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 19","termid":"PBO:0075207"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: PR:P40373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.05c","secondary_identifiers":["UniProtKB:P40373"],"synonyms":[{"name":"ATP-PRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ATP-PRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hisG","type":"exact"}],"termid":"PR:P40373"}


id: GO:0051802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the cytolysis by that organism of cells in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytolysis in other organism involved in symbiotic interaction (obsolete GO:0051802)","synonyms":[{"name":"regulation of cytolysis of cells in other organism during symbiotic interaction","type":"related"},{"name":"regulation of cytolysis of cells in other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0051802"}


id: PBO:0086745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; potential Cdc28p substrate","termid":"PBO:0086745"}


id: SO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of vegetative replication in plasmids and phages.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriV","synonyms":[{"name":"origin of vegetative replication","type":"exact"}],"termid":"SO:0000952"}


id: PBO:0083187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YFR011C; identified by expression profiling and mass spectrometry","termid":"PBO:0083187"}


id: PBO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin 1","termid":"PBO:0075344"}


id: GO:0072277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a metanephric glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular capillary formation","termid":"GO:0072104"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature morphogenesis","termid":"GO:0072276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular capillary formation","termid":"GO:0072277"}


id: PBO:0053158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLR antisense RNA 1","termid":"PBO:0053158"}


id: PBO:0076270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntabulin","termid":"PBO:0076270"}


id: PBO:0044075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2 tau variant","termid":"PBO:0044075"}


id: PR:O74384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A palmitoyltransferase ZDHHC18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03034","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase erf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.09","secondary_identifiers":["UniProtKB:O74384"],"synonyms":[{"name":"DHHC cysteine-rich domain-containing protein erf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZDHHC18","type":"exact"},{"name":"meiotically up-regulated gene 142 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ras protein acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74384"}


id: GO:1901172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytoene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00799","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytoene metabolic process","synonyms":[{"name":"phytoene metabolism","type":"exact"}],"termid":"GO:1901172"}


id: FYPO:0000213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which vesicle-mediated transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal vesicle-mediated transport during vegetative growth","synonyms":[{"name":"abnormal vesicle-mediated protein transport during vegetative growth","type":"narrow"},{"name":"abnormal vesicle-mediated transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000213"}


id: PBO:0076251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 2","termid":"PBO:0076251"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: PBO:0053999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1323","termid":"PBO:0053999"}


id: GO:0044019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 72) = CoA + histone H3 N6-acetyl-L-lysine (position 72).","definition_xrefs":["EC:2.3.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0140096","GO:0003674","GO:0003824","GO:0034212"],"is_obsolete":false,"name":"histone H3K72 acetyltransferase activity","synonyms":[{"name":"histone H3-K72 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K72 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K72 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K72 specific)","type":"exact"}],"termid":"GO:0044019"}


id: PBO:0054043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1381","termid":"PBO:0054043"}


id: PBO:0108969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 2A","termid":"PBO:0108969"}


id: PBO:0038493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 4","termid":"PBO:0038493"}


id: GO:0006749
data:
  {"annotated_genes":["SJAG_03494","SJAG_03316","SJAG_01162","SJAG_04858","SJAG_00903","SJAG_00988","SJAG_05181","SJAG_02599","SJAG_04726","SJAG_01995","SJAG_01612","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76103,77847,94793,98239],"is_not":false,"summary":null,"term":"GO:0006749"},{"annotations":[76467,77566,92577,103767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[97716,75787,94723,93909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00903":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_01612":null,"SJAG_01995":null,"SJAG_02599":null,"SJAG_03316":null,"SJAG_03494":null,"SJAG_04726":null,"SJAG_04858":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glutathione metabolism","type":"exact"},{"name":"oxidized glutathione reduction","type":"narrow"}],"termid":"GO:0006749","terms_by_termid":{"GO:0006749":null,"GO:0006750":null,"GO:0006751":null}}


id: PBO:0031279
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_chromosome_segregation","termid":"PBO:0031279"}


id: GO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains Grb2 and the adaptor protein Shc, and is involved in linking epidermal growth factor receptor (EGFR) activation to the p21-Ras pathway.","definition_xrefs":["PMID:7798267","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Grb2-Shc complex","synonyms":[{"name":"Grb2-Shc complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070437"}


id: PBO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 associated regulatory protein","termid":"PBO:0039642"}


id: PBO:0064343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A1","termid":"PBO:0064343"}


id: PR:O94570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A valine--pyruvate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic amino acid aminotransferase C1773.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.13","secondary_identifiers":["UniProtKB:O94570"],"synonyms":[{"name":"Spom972h-avtA","type":"exact"}],"termid":"PR:O94570"}


id: GO:0140469
data:
  {"annotated_genes":["SJAG_00169","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94950,104983],"is_not":false,"summary":null,"term":"GO:0140469"}]},"cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via GCN2 (also known as EIF2AK4), an intracellular protein kinase that is activated by stress signals, such as amino acid starvation.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GCN2-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0060733"],"synonyms":[{"name":"EIF2AK4-mediated signaling","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by amino acid starvation","type":"narrow"}],"termid":"GO:0140469","terms_by_termid":{"GO:0140469":null}}


id: GO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonuclease activity","termid":"GO:0060700"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: FYECO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which potassium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ K ions","synonyms":[{"name":"potassium ions added","type":"exact"}],"termid":"FYECO:0000031"}


id: GO:1905672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosome organization.","definition_xrefs":["GO_REF:0000058","PMID:25561470","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"negatively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysosome organization","synonyms":[{"name":"down regulation of lysosome organisation","type":"exact"},{"name":"down regulation of lysosome organization","type":"exact"},{"name":"down regulation of lysosome organization and biogenesis","type":"related"},{"name":"down-regulation of lysosome organisation","type":"exact"},{"name":"down-regulation of lysosome organization","type":"exact"},{"name":"down-regulation of lysosome organization and biogenesis","type":"related"},{"name":"downregulation of lysosome organisation","type":"exact"},{"name":"downregulation of lysosome organization","type":"exact"},{"name":"downregulation of lysosome organization and biogenesis","type":"related"},{"name":"inhibition of lysosome organisation","type":"narrow"},{"name":"inhibition of lysosome organization","type":"narrow"},{"name":"inhibition of lysosome organization and biogenesis","type":"related"},{"name":"negative regulation of lysosome organisation","type":"exact"},{"name":"negative regulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905672"}


id: PBO:0053277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B3","termid":"PBO:0053277"}


id: PBO:0073142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog C, vesicle trafficking protein","termid":"PBO:0073142"}


id: GO:1903057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of melanosome organization.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:24769727","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"negatively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of melanosome organization","synonyms":[{"name":"down regulation of melanosome organisation","type":"exact"},{"name":"down regulation of melanosome organization","type":"exact"},{"name":"down regulation of melanosome organization and biogenesis","type":"related"},{"name":"down-regulation of melanosome organisation","type":"exact"},{"name":"down-regulation of melanosome organization","type":"exact"},{"name":"down-regulation of melanosome organization and biogenesis","type":"related"},{"name":"downregulation of melanosome organisation","type":"exact"},{"name":"downregulation of melanosome organization","type":"exact"},{"name":"downregulation of melanosome organization and biogenesis","type":"related"},{"name":"inhibition of melanosome organisation","type":"narrow"},{"name":"inhibition of melanosome organization","type":"narrow"},{"name":"inhibition of melanosome organization and biogenesis","type":"related"},{"name":"negative regulation of melanosome organisation","type":"exact"},{"name":"negative regulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903057"}


id: PBO:0074672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58","termid":"PBO:0074672"}


id: PBO:0073860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A8","termid":"PBO:0073860"}


id: PBO:0078082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 2B","termid":"PBO:0078082"}


id: GO:1904586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:20805360","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"response to putrescine","termid":"GO:1904585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to putrescine","synonyms":[{"name":"cellular response to 1,4-Butanediamine","type":"exact"},{"name":"cellular response to 1,4-Diaminobutane","type":"exact"},{"name":"cellular response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904586"}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: PBO:0090752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Stt4","termid":"PBO:0090752"}


id: PBO:0063362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 1 inhibitor","termid":"PBO:0063362"}


id: GO:0061240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric nephron tubule are generated and organized. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["GO_REF:0000093","GOC:TermGenie","PMID:18727018","GOC:mengo_curators","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"},{"relation_name":"is_a","term_name":"propan-2-ol metabolic process","termid":"GO:1902639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentose catabolic process to propan-2-ol","secondary_identifiers":["GO:1990291"],"synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: FYPO:0001680
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the round of DNA replication that precedes meiosis I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin during premeiotic DNA replication","synonyms":[{"name":"abolished protein localisation to chromatin during premeiotic DNA replication","type":"exact"},{"name":"protein localization to chromatin during premeiotic DNA replication abolished","type":"exact"}],"termid":"FYPO:0001680"}


id: PBO:0002567
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the sequence previously referred to as SPAC27D7.10c was a duplication caused by missassembly of the cosmid","termid":"PBO:0002567"}


id: PBO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 3","termid":"PBO:0046022"}


id: PBO:0049295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTCD antisense RNA 1","termid":"PBO:0049295"}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PBO:0029980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trifluoperazine","termid":"PBO:0029980"}


id: GO:0044569
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microbial enzyme complex which contains nickel and iron in its active site. In Acetomicrobium flavidum it is an alpha 2 beta 2 tetramer.","definition_xrefs":["GOC:mengo_curators","PMID:8936309","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"[Ni-Fe] hydrogenase complex","synonyms":[{"name":"Ni-Fe hydrogenase complex","type":"exact"},{"name":"nickel-iron hydrogenase complex","type":"exact"}],"termid":"GO:0044569"}


id: PBO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 8","termid":"PBO:0044062"}


id: PBO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase","termid":"PBO:0004988"}


id: GO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-sn-glycerol + H+ + phosphocholine.","definition_xrefs":["RHEA:10604","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylcholine phospholipase C activity","secondary_identifiers":["MetaCyc:PHOSPHOLIPASE-C-RXN","EC:3.1.4.3","Reactome:R-HSA-9680388"],"synonyms":[{"name":"Clostridium oedematiens beta- and gamma-toxins activity","type":"narrow"},{"name":"Clostridium welchii alpha-toxin activity","type":"narrow"},{"name":"heat-labile hemolysin","type":"narrow"},{"name":"lipophosphodiesterase I activity","type":"related"},{"name":"phosphatidylcholine cholinephosphohydrolase activity","type":"related"},{"name":"phospholipase C, acting on phosphatidylcholine","type":"exact"}],"termid":"GO:0034480"}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:22582262","SO:0000673","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000294","FYPO:0003048"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: FYECO:0000035
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cu ions","synonyms":[{"name":"copper ions added","type":"exact"}],"termid":"FYECO:0000035"}


id: PBO:0043359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 1","termid":"PBO:0043359"}


id: PBO:0070538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 4","termid":"PBO:0070538"}


id: PBO:0078846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 2 (pseudogene)","termid":"PBO:0078846"}


id: PBO:0056896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 1","termid":"PBO:0056896"}


id: SO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which decreases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_translational_product_level","synonyms":[{"name":"decrease translational product level","type":"exact"}],"termid":"SO:0001555"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: PBO:0054788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2201","termid":"PBO:0054788"}


id: PBO:0043446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 7","termid":"PBO:0043446"}


id: FYPO:0003188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is abnormal. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein import into nucleus during vegetative growth","synonyms":[{"name":"abnormal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003188"}


id: GO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of L-phenylalanine into other compounds, including phosphoenolpyruvate.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete L-phenylalanine catabolic process to phosphoenolpyruvate (obsolete GO:0019562)","secondary_identifiers":["MetaCyc:PHENYLALANINE-DEG1-PWY"],"synonyms":[{"name":"phenylalanine breakdown to phosphoenolpyruvate","type":"exact"},{"name":"phenylalanine degradation to phosphoenolpyruvate","type":"exact"}],"termid":"GO:0019562"}


id: GO:0085014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into a dormant state of the symbiont within the host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dormancy entry of symbiont in host","termid":"GO:0085014"}


id: PBO:0076608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D26 antisense RNA 1","termid":"PBO:0076608"}


id: FYPO:0001461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases normally immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001461"}


id: GO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer of extracellular matrix deposited onto the surface of the pollen wall upon disintegration of the tapetal layer of the anther wall in the late stages of pollen development. The composition of this material is highly heterogeneous and includes waxes, lipid droplets, small aromatic molecules, and proteins. The pollen coat is proposed to have many functions, such as holding pollen in the anther until dispersal, facilitation of pollen dispersal, protection of pollen from water loss and UV radiation, and facilitation of adhesion of pollen to the stigma.","definition_xrefs":["GOC:rph","PMID:12930826","PMID:15012271","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen coat","synonyms":[{"name":"pollenkitt","type":"exact"},{"name":"tryphine","type":"exact"}],"termid":"GO:0070505"}


id: GO:0098793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the presynaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynapse","synonyms":[{"name":"presynaptic terminal","type":"exact"}],"termid":"GO:0098793"}


id: PBO:0058663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6791","termid":"PBO:0058663"}


id: FYECO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mating pheromone (M factor and P factor) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ mating pheromone","termid":"FYECO:0000058"}


id: PBO:0051126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR16-4 (pseudogene)","termid":"PBO:0051126"}


id: PBO:0069402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 662, pseudogene","termid":"PBO:0069402"}


id: PBO:0069196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 450, pseudogene","termid":"PBO:0069196"}


id: PBO:0066330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCAN family member 3","termid":"PBO:0066330"}


id: PBO:0084643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein involved in microtubule organization; involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins","termid":"PBO:0084643"}


id: PBO:0031179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe","termid":"PBO:0031179"}


id: GO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to a beta-type platelet-derived growth factor receptor (PDGFbeta) on the surface of a signal-receiving cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf","GOC:yaf","PMID:10372961","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"PDGF receptor-beta signaling pathway","type":"exact"},{"name":"PDGFR-beta signaling pathway","type":"exact"},{"name":"betaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:0035791"}


id: PBO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3, unknown biological role (predicted)","termid":"PBO:0016554"}


id: PBO:0086592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; overexpression causes a cell cycle delay or arrest; non-essential gene; YIR016W has a paralog, YOL036W, that arose from the whole genome duplication","termid":"PBO:0086592"}


id: PBO:0061925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily H member 1 pseudogene","termid":"PBO:0061925"}


id: PBO:0012578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7 (predicted)","termid":"PBO:0012578"}


id: PBO:0031563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_binding","termid":"PBO:0031563"}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_06135","SJAG_07008","SJAG_01838","SJAG_01503","SJAG_04899"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84791,73630,105037,77009,73107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null}}


id: SO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified asparagine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_asparagine","secondary_identifiers":["MOD:00903"],"synonyms":[{"name":"ModAsn","type":"exact"},{"name":"modified L asparagine","type":"exact"},{"name":"modified L-asparagine","type":"exact"}],"termid":"SO:0001388"}


id: GO:0070716
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"A mismatch repair process that corrects errors introduced that ensures the accuracy of DNA replication.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair","termid":"GO:0006298"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mismatch repair involved in maintenance of fidelity during DNA-dependent DNA replication","type":"related"}],"termid":"GO:0070716","terms_by_termid":{"GO:1990516":null}}


id: PBO:0061928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 2","termid":"PBO:0061928"}


id: MOD:00615
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because entry Unimod:261 site N-term R was abandoned. Remap to MOD:00584","definition_xrefs":["PubMed:14689565","Unimod:261"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00615 4-sulfophenyl isothiocyante modification to N-term R (obsolete MOD:00615)","termid":"MOD:00615"}


id: GO:0042870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-glucarate, the D-enantiomer of glucarate, is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"D-glucarate transmembrane transport","synonyms":[{"name":"D-glucarate transport","type":"related"}],"termid":"GO:0042870"}


id: GO:0017109
data:
  {"annotated_genes":["SJAG_00988","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76465,77565],"is_not":false,"summary":null,"term":"GO:0017109"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine.","definition_xrefs":["PMID:9675072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glutamate-cysteine ligase complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"gamma-glutamylcysteine synthetase complex","type":"exact"}],"termid":"GO:0017109","terms_by_termid":{"GO:0017109":null}}


id: GO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation of body hairs, projections from the surface of an organism, such that the hairs all point in a uniform direction along the surface.","definition_xrefs":["GOC:jid","GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of body hair or bristle planar orientation","termid":"GO:0048104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of body hair planar orientation","termid":"GO:0048105"}


id: PBO:0047552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 10","termid":"PBO:0047552"}


id: PBO:0082453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-3 sterol dehydrogenase; catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; human homolog NSDHL implicated in CK syndrome, and can complement yeast null mutant; molecular target of natural product and antifungal compound FR171456","termid":"PBO:0082453"}


id: GO:1904157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN4 thymocyte. A DN4 thymocyte is a CD4-,CD8- thymocyte that is also CD44-,CD25-.","definition_xrefs":["GOC:dph","GO_REF:0000086","GOC:TermGenie","PMID:25398325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN4 thymocyte differentiation","termid":"GO:1904157"}


id: PBO:0068671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 52, pseudogene","termid":"PBO:0068671"}


id: PATO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000338 compatability value (obsolete PATO:0000338)","termid":"PATO:0000338"}


id: GO:0016673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.8.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016673"}


id: GO:0052797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [X]-4-O-methyl-D-glucuronic acid + H2O = [X]-OH + methyl-D-glucuronic acid. This reaction is the hydrolysis of the ester linkage between 4-O-methyl-D-glucuronic acid (MeGlcA) and an alcohol (-OH) group attached to a molecule, denoted here as [X].","definition_xrefs":["PMID:16876163","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"4-O-methyl-glucuronoyl methylesterase activity","synonyms":[{"name":"glucuronoyl esterase activity","type":"broad"}],"termid":"GO:0052797"}


id: PBO:0076109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX16-NPEPL1 readthrough (NMD candidate)","termid":"PBO:0076109"}


id: PBO:0004850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop14 (predicted)","termid":"PBO:0004850"}


id: PBO:0041923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-synthase","termid":"PBO:0041923"}


id: PBO:0056351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 antisense RNA 1","termid":"PBO:0056351"}


id: GO:0050944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthophore differentiation","termid":"GO:0050938"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of xanthophore differentiation","synonyms":[{"name":"down regulation of xanthophore differentiation","type":"exact"},{"name":"down-regulation of xanthophore differentiation","type":"exact"},{"name":"downregulation of xanthophore differentiation","type":"exact"},{"name":"inhibition of xanthophore differentiation","type":"narrow"}],"termid":"GO:0050944"}


id: GO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2).","definition_xrefs":["PMID:8566699","PMID:1504073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"formate dehydrogenase complex","termid":"GO:0009326"}


id: PBO:0084135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity Ca2+/Mn2+ P-type ATPase; required for Ca2+ and Mn2+ transport into Golgi; involved in Ca2+ dependent protein sorting, processing; D53A mutant (Mn2+ transporting) is rapamycin sensitive, Q783A mutant (Ca2+ transporting) is rapamycin resistant; Mn2+ transport into Golgi lumen required for rapamycin sensitivity; mutations in human homolog ATP2C1 cause acantholytic skin condition Hailey-Hailey disease; human ATP2C1 can complement yeast null mutant","termid":"PBO:0084135"}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["PMID:11700298","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PBO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase inhibitor, endosulfine Igo1","termid":"PBO:0090078"}


id: GO:2000192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"negatively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of fatty acid transport","termid":"GO:2000192"}


id: PBO:0089311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid8","termid":"PBO:0089311"}


id: PBO:0016079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane organization protein Fhn1","termid":"PBO:0016079"}


id: FYPO:0007071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during anaphase a.","definition_xrefs":["PMID:31427431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0000337","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation during anaphase A","synonyms":[{"name":"increased rate of mitotic spindle elongation during anaphase A during vegetative growth","type":"exact"},{"name":"increased rate of mitotic spindle elongation during mitotic anaphase A","type":"exact"},{"name":"increased rate of mitotic spindle extension during anaphase A","type":"exact"},{"name":"increased rate of spindle elongation during anaphase A of mitosis","type":"exact"}],"termid":"FYPO:0007071"}


id: MOD:00019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-isoleucine.","definition_xrefs":["DeltaMass:0","RESID:AA0010","PubMed:6692818","ChEBI:30009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoleucine residue","synonyms":[{"name":"(2S,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"Ile","type":"exact"},{"name":"Isoleucyl","type":"exact"},{"name":"L-erythro-isoleucine","type":"exact"},{"name":"L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00019"}


id: GO:0070475
data:
  {"annotated_genes":["SJAG_01958","SJAG_03008","SJAG_02281","SJAG_04890","SJAG_02024","SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74884,77144,77585,77593,78256],"is_not":false,"summary":null,"term":"GO:0070475"},{"annotations":[78588,74834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to an atom in the nucleoside base portion of a nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01958":null,"SJAG_02024":null,"SJAG_02281":null,"SJAG_02417":null,"SJAG_03008":null,"SJAG_03877":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"rRNA base methylation","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0070475","terms_by_termid":{"GO:0070475":null,"GO:0070476":null}}


id: PBO:0083249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by fungal homology and RT-PCR","termid":"PBO:0083249"}


id: PATO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the molecular attraction exerted between two atoms or compounds.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affinity","termid":"PATO:0002070"}


id: GO:0003755
data:
  {"annotated_genes":["SJAG_04155","SJAG_00950","SJAG_02308","SJAG_01270","SJAG_02620","SJAG_03238","SJAG_04352","SJAG_02413","SJAG_03601","SJAG_01246","SJAG_00078","SJAG_03905","SJAG_01005","SJAG_00470","SJAG_00602","SJAG_02551","SJAG_01714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57747,70490,71681,72015,72604,74734,74752,75112,75308,75478,76864,76869,76939,78616,88403,99909,100781],"is_not":false,"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).","definition_xrefs":["EC:5.2.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RHEA:16237","GO:0042028","Reactome:R-HSA-2022073","MetaCyc:PEPTIDYLPROLYL-ISOMERASE-RXN","Reactome:R-HSA-9626816","GO:0004752"],"synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"narrow"},{"name":"PPIase activity","type":"related"},{"name":"cis-trans proline isomerase activity","type":"exact"},{"name":"cyclophilin activity","type":"related"},{"name":"cyclophilin-type peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"immunophilin","type":"related"},{"name":"juglone-sensitive cis-trans proline isomerase activity","type":"narrow"},{"name":"juglone-sensitive peptidyl-prolyl cis-trans isomerase activity","type":"narrow"},{"name":"parvulin","type":"related"},{"name":"peptide bond isomerase activity","type":"related"},{"name":"peptidyl-prolyl isomerase B reaction","type":"related"},{"name":"peptidylproline cis-trans-isomerase activity","type":"related"},{"name":"peptidylprolyl cis-trans isomerase activity","type":"related"},{"name":"peptidylprolyl isomerase activity","type":"related"},{"name":"rotamase activity","type":"related"}],"termid":"GO:0003755","terms_by_termid":{"GO:0003755":null}}


id: PBO:0084621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; involved in the response to oxidative stress; protects iron-sulfur clusters from oxidative inactivation along with MXR1; involved in the regulation of lifespan","termid":"PBO:0084621"}


id: GO:0030046
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103482,111347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"}]},"cv_name":"biological_process","definition":"Assembly of actin filament bundles in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"parallel actin filament bundle assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030046","terms_by_termid":{"GO:0070649":null}}


id: PBO:0027100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rDNA_antisense_small_RNA_level","termid":"PBO:0027100"}


id: PBO:0089095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp12","termid":"PBO:0089095"}


id: PBO:0048188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABA type A receptor associated protein like 3 pseudogene","termid":"PBO:0048188"}


id: PBO:0091896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive poison Wtf4","termid":"PBO:0091896"}


id: PBO:0087778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes","termid":"PBO:0087778"}


id: PBO:0017486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actively_participates_in","termid":"PBO:0017486"}


id: GO:0008892
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77658],"is_not":false,"summary":null,"term":"GO:0008892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanine + H2O = xanthine + NH3.","definition_xrefs":["EC:3.5.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"guanine deaminase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:GUANINE-DEAMINASE-RXN","RHEA:14665","Reactome:R-HSA-74255"],"synonyms":[{"name":"GAH activity","type":"related"},{"name":"guanase activity","type":"related"},{"name":"guanine aminase activity","type":"related"},{"name":"guanine aminohydrolase activity","type":"related"}],"termid":"GO:0008892","terms_by_termid":{"GO:0008892":null}}


id: GO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3a product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"complement component C3a binding","termid":"GO:0001850"}


id: FYPO:0001376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular calcium level during cellular response to salt stress","synonyms":[{"name":"normal cellular calcium accumulation during cellular response to salt stress","type":"related"},{"name":"normal cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"normal cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001376"}


id: GO:1905867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an epididymis over time, from its formation to the mature structure.","definition_xrefs":["PMID:12388089","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epididymis development","synonyms":[{"name":"epididymus development","type":"exact"}],"termid":"GO:1905867"}


id: PBO:0086298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in the ubiquitin-proteasome pathway; interacts with ubiquitinated protein, Cdc48p and the proteasomal regulatory particle; may protect cells from trivalent metalloid induced proteotoxicity; contains a PACE promoter element and is co-regulated with proteasome subunit genes; AN1-type zinc finger protein, with DHHC and ubiquitin-like domains (UBL); ortholog of ZFAND1, a human gene linked to cancer; protein abundance increases under DNA replication stress","termid":"PBO:0086298"}


id: PBO:0029276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_origin_recognition_complex_assembly","termid":"PBO:0029276"}


id: FYPO:0004427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of the ribosomal small subunit protein S6 begins later than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:24247430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","synonyms":[{"name":"delayed onset of dephosphorylation of ribosomal S6 during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of ribosomal S6 dephosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004427"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: PBO:0040903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 7","termid":"PBO:0040903"}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["Pfam:PF00017","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: GO:0007175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"},{"relation_name":"is_a","term_name":"negative regulation of signaling receptor activity","termid":"GO:2000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor-activated receptor activity","secondary_identifiers":["GO:0007177"],"synonyms":[{"name":"EGF receptor downregulation","type":"exact"},{"name":"down regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"downregulation of epidermal growth factor receptor activity","type":"exact"},{"name":"inhibition of epidermal growth factor receptor activity","type":"narrow"},{"name":"negative regulation of EGF receptor activity","type":"exact"},{"name":"negative regulation of EGFR activity","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0007175"}


id: GO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ferric triacetylfusarinine C into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"},{"relation_name":"is_a","term_name":"organic substance transport","termid":"GO:0071702"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"ferric triacetylfusarinine C import into cell","synonyms":[{"name":"ferric triacetylfusarinine C transport","type":"broad"}],"termid":"GO:0015686"}


id: SO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene_member_region that encodes sequence that directly contributes to the molecular function of its gene or gene product.","definition_xrefs":["Clingen:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_gene_region","synonyms":[{"name":"functional gene region","type":"exact"}],"termid":"SO:0002188"}


id: GO:0120249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lateral wall of an outer hair cell (OHC) is a unique trilaminate composite consisting of the plasma membrane, an underlying cytoskeletal network containing an actin-spectrin cortical lattice, and an adjacent system of circumferential lamellar organelles known as the subsurface cisternae.","definition_xrefs":["PMID:9412485","PMID:26352669","GOC:krc","PMID:31920560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral wall of outer hair cell","synonyms":[{"name":"OHC lateral wall","type":"related"},{"name":"lateral wall of OHC","type":"related"},{"name":"outer hair cell lateral wall","type":"exact"}],"termid":"GO:0120249"}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: GO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow acquire the specialized features of T1 stage B cells in the spleen. T1 stage B cells do not express either CD23 or CD21.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitional stage B cell differentiation","termid":"GO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional one stage B cell differentiation","synonyms":[{"name":"T1 stage B cell differentiation","type":"exact"},{"name":"transitional one stage B cell development","type":"related"},{"name":"transitional one stage B lymphocyte differentiation","type":"exact"},{"name":"transitional one stage B-cell differentiation","type":"exact"},{"name":"transitional one stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002333"}


id: PBO:0031457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_N-ethylmaleimide","termid":"PBO:0031457"}


id: PATO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000875 irritable (obsolete PATO:0000875)","termid":"PATO:0000875"}


id: FYPO:0003584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is increased. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"increased double-strand break repair via nonhomologous end joining","synonyms":[{"name":"increased NHEJ","type":"exact"},{"name":"increased double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"increased nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003584"}


id: FYPO:0008080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a heptakisphosphate 5-kinase is decreased.","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008080"}


id: GO:0046911
data:
  {"annotated_genes":["SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88931],"is_not":false,"summary":null,"term":"GO:0046911"}]},"cv_name":"molecular_function","definition":"The formation of bonds from two or more atoms within the same ligand to a metal atom in complexes in which the metal is part of a ring.","definition_xrefs":["ISBN:0198506732","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0046872"],"is_obsolete":false,"name":"metal chelating activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heavy metal chelation","type":"narrow"},{"name":"metal chelation","type":"exact"}],"termid":"GO:0046911","terms_by_termid":{"GO:0046911":null}}


id: PBO:0041339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 33","termid":"PBO:0041339"}


id: PBO:0086754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; proper regulation of expression during heat stress is sphingolipid-dependent; mCherry fusion protein localizes to the vacuole; YOR186W has a paralog, YLR297W, that arose from the whole genome duplication","termid":"PBO:0086754"}


id: PBO:0067462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 587, pseudogene","termid":"PBO:0067462"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0055673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase C, hepatic type","termid":"PBO:0055673"}


id: GO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"negatively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of histamine uptake","synonyms":[{"name":"down regulation of histamine uptake","type":"exact"},{"name":"down-regulation of histamine uptake","type":"exact"},{"name":"downregulation of histamine uptake","type":"exact"},{"name":"negative regulation of histamine import","type":"exact"}],"termid":"GO:0051617"}


id: FYPO:0009090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of sodium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of sodium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to sodium chloride and SDS","type":"exact"},{"name":"hypersensitive to sodium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to sodium chloride and SDS","type":"exact"},{"name":"sensitive to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and SDS in combination","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009090"}


id: GO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular wound healing","termid":"GO:0061043"}


id: GO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker.","definition_xrefs":["PMID:11076968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"part_of","term_name":"centrosome cycle","termid":"GO:0007098"},{"relation_name":"regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"}


id: PBO:0027884
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_methylation","termid":"PBO:0027884"}


id: PBO:0075385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp1 transcription factor","termid":"PBO:0075385"}


id: PBO:0054690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2099","termid":"PBO:0054690"}


id: PBO:0064139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase, membrane associated tyrosine/threonine 1","termid":"PBO:0064139"}


id: SO:1000019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from cytidine to adenine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_to_purine_transversion","termid":"SO:1000018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_to_A_transversion","synonyms":[{"name":"C to A transversion","type":"exact"}],"termid":"SO:1000019"}


id: GO:0022603
data:
  {"annotated_genes":["SJAG_04509","SJAG_00236","SJAG_02022","SJAG_03637","SJAG_02536","SJAG_04724","SJAG_00855","SJAG_00610","SJAG_01456","SJAG_04522","SJAG_02169","SJAG_00661","SJAG_04461","SJAG_00244","SJAG_00028","SJAG_03581","SJAG_04203","SJAG_01799","SJAG_01458","SJAG_00596","SJAG_02838","SJAG_00845","SJAG_00333","SJAG_03631","SJAG_03705","SJAG_03793","SJAG_04322","SJAG_00304","SJAG_01212","SJAG_02392","SJAG_03486","SJAG_04666","SJAG_00216","SJAG_00514","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85585,91428,90187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[83838,112995,106042,111637,102224,98914,95232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[86424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[111466,98897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[97504,101830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[102975,111735],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:2000784"},{"annotations":[95668,100746,99132,89360],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[104208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[110238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[113641,108589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022604"},{"annotations":[114559,114558,100732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[113843,91249,90193,108283,86816,99956],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000100"},{"annotations":[83689,88057,98291],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00304":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_01456":null,"SJAG_01458":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03793":null,"SJAG_04203":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"regulation of morphogenesis","type":"exact"}],"termid":"GO:0022603","terms_by_termid":{"GO:0008360":null,"GO:0010637":null,"GO:0022604":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0090141":null,"GO:0090258":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhizomelic chondrodysplasia punctata (RCDP)","termid":"PBO:0002654"}


id: GO:0072414
data:
  {"annotated_genes":["SJAG_03048","SJAG_01805","SJAG_00082","SJAG_01837","SJAG_04140","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111826,89429,97839,85720,106465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[97849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90155,97850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072455","GO:0072473"],"synonyms":[{"name":"mitotic G2/M transition checkpoint effector process","type":"related"},{"name":"mitotic cell cycle G1/S checkpoint effector process","type":"related"},{"name":"mitotic cell cycle checkpoint effector process","type":"exact"},{"name":"response to mitotic G2/M transition checkpoint signal","type":"related"},{"name":"response to mitotic cell cycle G1/S checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle G1/S checkpoint","type":"related"},{"name":"response to signal involved in mitotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072414","terms_by_termid":{"GO:0072435":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0039806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 2, pseudogene","termid":"PBO:0039806"}


id: PBO:0083518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRM1/YOR201c","termid":"PBO:0083518"}


id: GO:1904257
data:
  {"annotated_genes":["SJAG_03528","SJAG_00328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74148,99740],"is_not":false,"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol across the Golgi membrane into the Golgi lumen.","definition_xrefs":["GO_REF:0000075","PMID:25732056","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"cytosol to Golgi apparatus transport","termid":"GO:0140820"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"zinc ion import into Golgi lumen","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cytosol to Golgi apparatus zinc transport","type":"exact"},{"name":"zinc II ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import across Golgi membrane","type":"exact"},{"name":"zinc ion import into Golgi apparatus","type":"exact"},{"name":"zinc ion import into Golgi membrane","type":"related"},{"name":"zinc(2+) import across Golgi membrane","type":"exact"}],"termid":"GO:1904257","terms_by_termid":{"GO:1904257":null}}


id: PBO:0074007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 8","termid":"PBO:0074007"}


id: GO:0010099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of photomorphogenesis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"photomorphogenesis","termid":"GO:0009640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photomorphogenesis","termid":"GO:0010099"}


id: PBO:0056705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal embryonic leucine zipper kinase","termid":"PBO:0056705"}


id: PBO:0053347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 235","termid":"PBO:0053347"}


id: PBO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paramyloidosis","termid":"PBO:0010228"}


id: PBO:0088993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein","termid":"PBO:0088993"}


id: PBO:0068622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 2","termid":"PBO:0068622"}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: PBO:0028230
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0028230"}


id: GO:0034826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydroxy-1,2,5,6,7,8-hexahydronaphthalene + NAD+ = 1,2-dihydroxy-5,6,7,8-tetrahydronaphthalene + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxy-1,2,5,6,7,8-hexyhadronaphthalene dehydrogenase activity","termid":"GO:0034826"}


id: PBO:0034265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_biological_homology_relationship_with","termid":"PBO:0034265"}


id: PBO:0008140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD3 domain","termid":"PBO:0008140"}


id: PBO:0048127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 8","termid":"PBO:0048127"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: PBO:0059174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor accessory protein","termid":"PBO:0059174"}


id: GO:0031087
data:
  {"annotated_genes":["SJAG_02370","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75207,77730],"is_not":false,"summary":null,"term":"GO:0031087"},{"annotations":[87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that is independent of poly(A) tail shortening.","definition_xrefs":["PMID:15225544","PMID:15225542","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylguanosine-cap decapping","termid":"GO:0110156"},{"relation_name":"part_of","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","termid":"GO:0031086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"deadenylation-independent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"deadenylylation-independent decapping","type":"exact"}],"termid":"GO:0031087","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: PBO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engrailed homeobox 1","termid":"PBO:0046301"}


id: FYPO:0006064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring disassembly is abnormal.","definition_xrefs":["PomBase:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal septin ring disassembly during vegetative growth","synonyms":[{"name":"abnormal septin ring disassembly during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006064"}


id: GO:0005028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete CD40 receptor activity (obsolete GO:0005028)","synonyms":[{"name":"CD40 receptor activity","type":"exact"}],"termid":"GO:0005028"}


id: GO:1900893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane metabolic process","synonyms":[{"name":"regulation of tridecane metabolism","type":"exact"}],"termid":"GO:1900893"}


id: PBO:0075184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F pseudogene 1","termid":"PBO:0075184"}


id: PBO:0041443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C9orf78 pseudogene 2","termid":"PBO:0041443"}


id: GO:0034321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + an alcohol = CoA + an octyl ester.","definition_xrefs":["PMID:16361250","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"O-octanoyltransferase activity","termid":"GO:0016414"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alcohol O-octanoyltransferase activity","termid":"GO:0034321"}


id: PBO:0066926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 228","termid":"PBO:0066926"}


id: GO:0019182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when histamine has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"histamine-gated chloride channel activity","termid":"GO:0019182"}


id: GO:0140368
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that recognizes, binds and sequesters a specific receptor ligand to prevent it from binding to its regular receptor. May be soluble or membrane bound.","definition_xrefs":["GOC:bhm","PMID:30621730","PMID:9168977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"decoy receptor complex","synonyms":[{"name":"osteoclastogenesis inhibitory factor","type":"narrow"},{"name":"osteoprotegerin complex","type":"narrow"}],"termid":"GO:0140368"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["GO:0007005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: PBO:0059321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 6","termid":"PBO:0059321"}


id: PBO:0047477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 4","termid":"PBO:0047477"}


id: PBO:0062807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 7","termid":"PBO:0062807"}


id: PBO:0053478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 449","termid":"PBO:0053478"}


id: GO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone biosynthetic process (obsolete GO:0046212)","synonyms":[{"name":"methyl ethyl ketone anabolism","type":"exact"},{"name":"methyl ethyl ketone biosynthesis","type":"exact"},{"name":"methyl ethyl ketone biosynthetic process","type":"exact"},{"name":"methyl ethyl ketone formation","type":"exact"},{"name":"methyl ethyl ketone synthesis","type":"exact"}],"termid":"GO:0046212"}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: PR:O94637
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA N6-adenosine threonylcarbamoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.03","secondary_identifiers":["UniProtKB:O94637"],"synonyms":[{"name":"N6-L-threonylcarbamoyladenine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-OSGEP","type":"exact"},{"name":"pombe glycoprotease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein kae1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein kae1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94637"}


id: SO:0002138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript feature that has been predicted but is not yet validated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted_transcript","synonyms":[{"name":"predicted transcript","type":"exact"}],"termid":"SO:0002138"}


id: GO:0090249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cell migration involved in somitogenic axis elongation","termid":"GO:0090248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration involved in somitogenic axis elongation","synonyms":[{"name":"regulation of cell motility involved in somitogenic axis elongation","type":"broad"}],"termid":"GO:0090249"}


id: GO:0042597
data:
  {"annotated_genes":["SJAG_02093","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98414],"is_not":false,"summary":null,"term":"GO:0042597"},{"annotations":[108550,108551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030287"}]},"cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria).","definition_xrefs":["GOC:md","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_02093":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"periplasmic space","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005620"],"synonyms":[{"name":"periplasm","type":"exact"}],"termid":"GO:0042597","terms_by_termid":{"GO:0030287":null,"GO:0042597":null}}


id: PBO:0065768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-tRNA synthetase 1","termid":"PBO:0065768"}


id: PBO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase epsilon subunit Ost2 (predicted)","termid":"PBO:0001705"}


id: PBO:0014601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase/mitochondrial ribosomal protein subunit L21, fusion protein (predicted)","termid":"PBO:0014601"}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: FYPO:0000615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic S phase progression","termid":"FYPO:0000610"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic S phase","synonyms":[{"name":"decreased duration of S phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in S phase: increased rate","type":"related"},{"name":"reduced duration of mitotic S phase","type":"exact"}],"termid":"FYPO:0000615"}


id: GO:0031930
data:
  {"annotated_genes":["SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70658],"is_not":false,"summary":null,"term":"GO:0031930"}]},"cv_name":"biological_process","definition":"The series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.","definition_xrefs":["GOC:jh","PMID:15068799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitochondria-nucleus signaling pathway","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"mitochondria-nucleus signal transduction","type":"exact"},{"name":"mitochondrial signaling pathway","type":"exact"},{"name":"mitochondrial signalling pathway","type":"exact"},{"name":"retrograde response","type":"exact"}],"termid":"GO:0031930","terms_by_termid":{"GO:0031930":null}}


id: PBO:0063228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 Y-linked","termid":"PBO:0063228"}


id: PBO:0070596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 63","termid":"PBO:0070596"}


id: GO:0035216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the haltere imaginal disc over time, from its initial formation through to its metamorphosis to form the adult capitellum, pedicel, haltere sclerite, metathoracic spiracle and metanotum.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere disc development","termid":"GO:0035216"}


id: PBO:0015234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in sporulation Dbl4","termid":"PBO:0015234"}


id: GO:0034697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin I","synonyms":[{"name":"response to prostaglandin I stimulus","type":"exact"}],"termid":"GO:0034697"}


id: GO:0140802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal glycine + NAD+ = [protein]-C-terminal O-(ADP-D-ribosyl)-glycine + nicotinamide.","definition_xrefs":["RHEA:58268","PMID:28525742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"NAD+-protein-C-terminal glycine ADP-ribosyltransferase activity","termid":"GO:0140802"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:0097192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["PMID:20816705","GOC:mtg_apoptosis","PMID:15044679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction in absence of ligand","termid":"GO:0038034"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"dependence receptor signaling pathway","type":"related"},{"name":"extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:0097192"}


id: PR:O43017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swd3 gene.","definition_xrefs":["UniProtKB:O43017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.03","synonyms":[{"name":"COMPASS component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-swd3","type":"exact"},{"name":"complex proteins associated with set1 protein swd3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43017"}


id: PBO:0085125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; required for 35S pre-RNA processing and 40S ribosomal subunit biogenesis","termid":"PBO:0085125"}


id: GO:0002850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peripheral tolerance induction","termid":"GO:0002659"},{"relation_name":"is_a","term_name":"negative regulation of T cell tolerance induction","termid":"GO:0002665"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"negatively_regulates","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral T cell tolerance induction","synonyms":[{"name":"down regulation of peripheral T cell tolerance induction","type":"exact"},{"name":"down-regulation of peripheral T cell tolerance induction","type":"exact"},{"name":"downregulation of peripheral T cell tolerance induction","type":"exact"},{"name":"inhibition of peripheral T cell tolerance induction","type":"narrow"}],"termid":"GO:0002850"}


id: GO:0036474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to hydrogen peroxide (H2O2).","definition_xrefs":["GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete cell death in response to hydrogen peroxide (obsolete GO:0036474)","synonyms":[{"name":"cell death in response to H2O2","type":"exact"},{"name":"hydrogen peroxide-mediated cell death","type":"related"}],"termid":"GO:0036474"}


id: GO:0001705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of ectoderm during gastrulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of primary germ layer","termid":"GO:0001704"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectoderm formation","termid":"GO:0001705"}


id: GO:1900717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"negatively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of violaceol II biosynthetic process","synonyms":[{"name":"down regulation of violaceol II anabolism","type":"exact"},{"name":"down regulation of violaceol II biosynthesis","type":"exact"},{"name":"down regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down regulation of violaceol II formation","type":"exact"},{"name":"down regulation of violaceol II synthesis","type":"exact"},{"name":"down-regulation of violaceol II anabolism","type":"exact"},{"name":"down-regulation of violaceol II biosynthesis","type":"exact"},{"name":"down-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"down-regulation of violaceol II formation","type":"exact"},{"name":"down-regulation of violaceol II synthesis","type":"exact"},{"name":"downregulation of violaceol II anabolism","type":"exact"},{"name":"downregulation of violaceol II biosynthesis","type":"exact"},{"name":"downregulation of violaceol II biosynthetic process","type":"exact"},{"name":"downregulation of violaceol II formation","type":"exact"},{"name":"downregulation of violaceol II synthesis","type":"exact"},{"name":"inhibition of violaceol II anabolism","type":"exact"},{"name":"inhibition of violaceol II biosynthesis","type":"exact"},{"name":"inhibition of violaceol II biosynthetic process","type":"narrow"},{"name":"inhibition of violaceol II formation","type":"exact"},{"name":"inhibition of violaceol II synthesis","type":"exact"},{"name":"negative regulation of violaceol II anabolism","type":"exact"},{"name":"negative regulation of violaceol II biosynthesis","type":"exact"},{"name":"negative regulation of violaceol II formation","type":"exact"},{"name":"negative regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900717"}


id: PBO:0075583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 7","termid":"PBO:0075583"}


id: GO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Specification of the borders of posterior gap gene expression mediated largely by the effects of other gap genes; in insects this is exemplified by hunchback and tailless repression of knirps.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of posterior gap gene boundaries (obsolete GO:0007361)","termid":"GO:0007361"}


id: PBO:0040152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 1","termid":"PBO:0040152"}


id: GO:2000543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"positively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrulation","termid":"GO:2000543"}


