# terms

id: FYPO:0000342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cellular respiration is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular respiration","synonyms":[{"name":"decreased cellular respiration during mitotic cell cycle","type":"related"},{"name":"decreased cellular respiration during vegetative growth","type":"exact"},{"name":"decreased respiration","type":"broad"},{"name":"decreased respiratory metabolism","type":"exact"},{"name":"reduced cellular respiration","type":"exact"},{"name":"respiratory metabolism: decreased","type":"related"}],"termid":"FYPO:0000342"}


id: FYPO:0005360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the RTS1 replication termination site prevents replication fork movement in the opposite of normal direction. Normally, RTS1 acts as a barrier to replication forks moving in the cenII-distal direction.","definition_xrefs":["PMID:18723894","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"reversed RTS1 barrier polarity","synonyms":[{"name":"reversed RTS1 barrier polarity during mitotic cell cycle","type":"related"},{"name":"reversed RTS1 barrier polarity during vegetative growth","type":"exact"}],"termid":"FYPO:0005360"}


id: GO:0102035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-methylpropanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = (2E)-2-methylpropenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:3988734","RHEA:44180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-methylpropanoyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.5","MetaCyc:MEPROPCOA-FAD-RXN"],"synonyms":[{"name":"isobutyryl-CoA:FAD oxidoreductase activity","type":"exact"}],"termid":"GO:0102035"}


id: FYPO:0003592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to the anaphase-promoting complex (APC) occurs to a greater extent than normal. The protein whose binding to the APC may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"increased anaphase-promoting complex binding","termid":"FYPO:0003592"}


id: GO:1901104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracenomycin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetracenomycin C metabolic process","synonyms":[{"name":"tetracenomycin C metabolism","type":"exact"}],"termid":"GO:1901104"}


id: MOD:01546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N'-derivatized histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01546"}


id: PBO:0039906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF7 antisense RNA 1","termid":"PBO:0039906"}


id: PR:Q09820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of nonsense transcripts 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10887:SF26","OMA:SCHPO00313","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase upf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16C9.06c","secondary_identifiers":["UniProtKB:Q09820"],"synonyms":[{"name":"Spom972h-UPF1","type":"exact"},{"name":"nonsense-mediated mRNA decay protein upf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"regulator of nonsense transcripts 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"up-frameshift suppressor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09820"}


id: PBO:0005053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf4","termid":"PBO:0005053"}


id: PBO:0087525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes the oxidation of isocitrate to alpha-ketoglutarate in the TCA cycle","termid":"PBO:0087525"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: PBO:0049462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 2","termid":"PBO:0049462"}


id: GO:1990346
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BID-BCL-xl complex","termid":"GO:1990346"}


id: GO:0009127
data:
  {"annotated_genes":["SJAG_01814","SJAG_02850","SJAG_06634","SJAG_02364","SJAG_01661","SJAG_01070","SJAG_04681","SJAG_01081","SJAG_03355","SJAG_03140","SJAG_01298","SJAG_04634","SJAG_00964","SJAG_04123","SJAG_01859","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76078,77592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[105517,95042,93328,98820,71565,76120,70134,109677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[111946,73569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[103585,59248,74126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[74747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[97254,74748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[74749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate biosynthetic process","termid":"GO:0009124"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine nucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"purine nucleoside monophosphate anabolism","type":"exact"},{"name":"purine nucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine nucleoside monophosphate formation","type":"exact"},{"name":"purine nucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009127","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: PBO:0083683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal SNARE related to mammalian syntaxin 8","termid":"PBO:0083683"}


id: GO:0120254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound metabolic process","synonyms":[{"name":"alkene substituted compound metabolic process","type":"exact"},{"name":"alkene substituted compound metabolism","type":"exact"}],"termid":"GO:0120254"}


id: MOD:01840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-allo-isoleucine.","definition_xrefs":["RESID:AA0546","ChEBI:43433","PubMed:20805503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-allo-isoleucine","synonyms":[{"name":"(2S,3R)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"L-allo-isoleucine","type":"exact"},{"name":"L-threo-isoleucine","type":"exact"},{"name":"MOD_RES L-allo-isoleucine","type":"exact"},{"name":"allo-L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:01840"}


id: PBO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 8 (pseudogene)","termid":"PBO:0060160"}


id: PBO:0058927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7f-1","termid":"PBO:0058927"}


id: FYPO:0002937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased pre-mRNA level","synonyms":[{"name":"decreased accumulation of pre-mRNA transcripts","type":"related"},{"name":"decreased pre-mRNA accumulation","type":"related"},{"name":"decreased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"decreased pre-mRNA level during vegetative growth","type":"exact"},{"name":"decreased pre-mRNA transcript level","type":"exact"},{"name":"reduced pre-mRNA level","type":"exact"}],"termid":"FYPO:0002937"}


id: GO:0071517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in preserving the structure of a stable single-strand DNA lesion that triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["PMID:18723894","GOC:mah","PMID:14765111"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of imprinting at mating-type locus (obsolete GO:0071517)","synonyms":[{"name":"mating type determination, maintenance of imprinting","type":"exact"}],"termid":"GO:0071517"}


id: GO:0030699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl phosphate + H2O + NH4 + thioredoxin disulfide = glycine + H+ + phosphate + thioredoxin.","definition_xrefs":["EC:1.21.4.2","RHEA:12232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycine reductase activity","secondary_identifiers":["KEGG_REACTION:R07226","MetaCyc:RXN-7566"],"synonyms":[{"name":"acetyl-phosphate ammonia:thioredoxin disulfide oxidoreductase (glycine-forming)","type":"related"}],"termid":"GO:0030699"}


id: PBO:0073340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 2","termid":"PBO:0073340"}


id: PBO:0080724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 associated protein","termid":"PBO:0080724"}


id: GO:0098656
data:
  {"annotated_genes":["SJAG_01168","SJAG_01973","SJAG_01941","SJAG_02463","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61803,65935,85206],"is_not":false,"summary":null,"term":"GO:0098656"},{"annotations":[70528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902476"},{"annotations":[108931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140116"}]},"cv_name":"biological_process","definition":"The process in which a monoatomic anion is transported across a membrane. Monatomic anions (also called simple anions) are negatively charged ions consisting of exactly one atom.","definition_xrefs":["GOC:dos","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transport","termid":"GO:0006820"},{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"monoatomic anion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["GO:0099133"],"synonyms":[{"name":"ATP hydrolysis coupled anion transmembrane transport","type":"narrow"},{"name":"anion transmembrane transport","type":"exact"}],"termid":"GO:0098656","terms_by_termid":{"GO:0098656":null,"GO:0140116":null,"GO:1902476":null}}


id: PBO:0077243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 4","termid":"PBO:0077243"}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: GO:0007060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"male meiosis chromosome segregation","termid":"GO:0007060"}


id: PBO:0040146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asialoglycoprotein receptor 1","termid":"PBO:0040146"}


id: PBO:0018281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med17","termid":"PBO:0018281"}


id: PBO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-4","termid":"PBO:0075041"}


id: GO:2001070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to starch.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"starch binding","synonyms":[{"name":"amidon binding","type":"related"},{"name":"amylum binding","type":"related"}],"termid":"GO:2001070"}


id: GO:0103102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 8-methylthiooctylhydroximate = H+ + 7-methylthioheptyldesulfoglucosinolate + UDP.","definition_xrefs":["EC:2.4.1.195","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4327"],"termid":"GO:0103102"}


id: PBO:0017494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght3","termid":"PBO:0017494"}


id: PBO:0027834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_septum_edging_catabolic_process","termid":"PBO:0027834"}


id: PBO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0035953"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: FYPO:0001734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which duplicated mitotic spindle pole bodies do not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0000641","FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitotic spindle pole body separation","synonyms":[{"name":"abolished spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"clustered mitotic spindle pole bodies","type":"related"},{"name":"mitotic SPB separation abolished","type":"exact"},{"name":"mitotic spindle pole body separation abolished","type":"exact"},{"name":"spindle pole body separation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001734"}


id: SO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site considered part of the normal chromosomal structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_fragile_site","termid":"SO:0002350"}


id: GO:2001074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metanephros development","termid":"GO:0072215"},{"relation_name":"regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"}


id: PBO:0070987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 11","termid":"PBO:0070987"}


id: SO:0000428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U5 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U5_LTR_region","termid":"SO:0000422"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5_five_prime_LTR_region","synonyms":[{"name":"U5 5' long terminal repeat region","type":"exact"},{"name":"U5 five prime LTR region","type":"exact"}],"termid":"SO:0000428"}


id: _global:participates_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a continuant and a process, in which the continuant is somehow involved in the process","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in","secondary_identifiers":["RO:0000056"],"termid":"_global:participates_in"}


id: PATO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A depth quality which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"depth","termid":"PATO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased depth","secondary_identifiers":["PATO:0001666"],"synonyms":[{"name":"deep","type":"exact"}],"termid":"PATO:0001596"}


id: PBO:0078144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 23/delta variable 6","termid":"PBO:0078144"}


id: PBO:0030899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_regulation_phenotype_during_vegetative_growth","termid":"PBO:0030899"}


id: PBO:0056225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E1","termid":"PBO:0056225"}


id: GO:0061267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast development","termid":"GO:0072141"},{"relation_name":"part_of","term_name":"mesonephric interstitial fibroblast differentiation","termid":"GO:0061266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast development","synonyms":[{"name":"mesonephros interstitial cell development","type":"exact"}],"termid":"GO:0061267"}


id: GO:1900997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene biosynthetic process","synonyms":[{"name":"benzene anabolism","type":"exact"},{"name":"benzene biosynthesis","type":"exact"},{"name":"benzene formation","type":"exact"},{"name":"benzene synthesis","type":"exact"}],"termid":"GO:1900997"}


id: PBO:0074429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 29","termid":"PBO:0074429"}


id: GO:0005350
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyrimidine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"pyrimidine nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base transmembrane transporter activity","type":"exact"},{"name":"pyrimidine transmembrane transporter activity","type":"related"}],"termid":"GO:0005350","terms_by_termid":{"GO:0015505":null}}


id: GO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving raffinose.","definition_xrefs":["PMID:19211694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of raffinose metabolic process","termid":"GO:0080091"}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: PATO:0002178
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position around a central point or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised radially","termid":"PATO:0002178"}


id: PBO:0028425
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_fluoride","termid":"PBO:0028425"}


id: GO:0052750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reactive black 5 + hydrogen peroxide = oxidized reactive black 5 + 2 H2O.","definition_xrefs":["KEGG_REACTION:R07612","MetaCyc:RXN-8666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reactive-black-5:hydrogen-peroxide oxidoreductase activity","secondary_identifiers":["EC:1.11.1.16","RHEA:22396"],"synonyms":[{"name":"versatile peroxidase activity","type":"broad"}],"termid":"GO:0052750"}


id: PR:O74920
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph2 gene.","definition_xrefs":["UniProtKB:O74920","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vph2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.10","synonyms":[{"name":"Spom972h-vph2","type":"exact"}],"termid":"PR:O74920"}


id: GO:0140061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-hydroxymethylcytosine + 2-oxoglutarate + O2 = 5-formylcytosine + succinate + CO2.","definition_xrefs":["PMID:27918559"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-hydroxymethylcytosine dioxygenase activity (obsolete GO:0140061)","synonyms":[{"name":"5hmC dioxygenase","type":"exact"}],"termid":"GO:0140061"}


id: PBO:0028370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GU_repeat_RNA_binding","termid":"PBO:0028370"}


id: PR:O74745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anp1 gene.","definition_xrefs":["UniProtKB:O74745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan polymerase II complex anp1 subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.04","synonyms":[{"name":"M-Pol II subunit anp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anp1","type":"exact"}],"termid":"PR:O74745"}


id: FYPO:0002686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of trehalose measured in a spore is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose level","termid":"FYPO:0002685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose level in spore","synonyms":[{"name":"increased trehalose accumulation in spore","type":"related"}],"termid":"FYPO:0002686"}


id: PBO:0057131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 215","termid":"PBO:0057131"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: GO:0051842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either active or passive, by which an organism avoids the effects of the symbiont organism's immune response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont immune response (obsolete GO:0051842)","synonyms":[{"name":"evasion or tolerance of symbiont immune response","type":"exact"},{"name":"immune evasion","type":"broad"}],"termid":"GO:0051842"}


id: PBO:0080537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 2","termid":"PBO:0080537"}


id: PBO:0056393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein RP/EB family member 1","termid":"PBO:0056393"}


id: PBO:0015683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic1","termid":"PBO:0015683"}


id: PBO:0051656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 11","termid":"PBO:0051656"}


id: PBO:0109133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 6","termid":"PBO:0109133"}


id: PBO:0078181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-5","termid":"PBO:0078181"}


id: PBO:0027510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_following_spore_germination,_single_cell_division,_unequal_chromosome_segregation","termid":"PBO:0027510"}


id: PBO:0028734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_L-selenoneine_level_during_vegetative_growth","termid":"PBO:0028734"}


id: PBO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_for","termid":"PBO:0034322"}


id: FYPO:0007992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during metaphase.","definition_xrefs":["PomBase:mlr","PMID:35286199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during metaphase","type":"exact"}],"termid":"FYPO:0007992"}


id: GO:0072488
data:
  {"annotated_genes":["SJAG_04731","SJAG_04136"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70249,74772],"is_not":false,"summary":null,"term":"GO:0072488"}]},"cv_name":"biological_process","definition":"The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04136":null,"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"ammonium transmembrane transport","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0015696"],"synonyms":[{"name":"ammonium membrane transport","type":"exact"},{"name":"ammonium transport","type":"broad"},{"name":"ammonia transport","type":"broad"}],"termid":"GO:0072488","terms_by_termid":{"GO:0072488":null}}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: PBQ:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G2 due to glucose limitation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence","termid":"PBQ:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G2 arrest due to glucose limitation","synonyms":[{"name":"cellular quiescence following G2 arrest due to glucose limitation","type":"exact"},{"name":"quiescence following G2 arrest due to glucose limitation","type":"broad"}],"termid":"PBQ:0000004"}


id: PBO:0028430
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyridoxine_import","termid":"PBO:0028430"}


id: GO:0006035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cuticle chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues, found in cuticles.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin biosynthetic process","termid":"GO:0006031"},{"relation_name":"is_a","term_name":"cuticle chitin metabolic process","termid":"GO:0006034"},{"relation_name":"part_of","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle chitin biosynthetic process","synonyms":[{"name":"cuticle chitin anabolism","type":"exact"},{"name":"cuticle chitin biosynthesis","type":"exact"},{"name":"cuticle chitin formation","type":"exact"},{"name":"cuticle chitin synthesis","type":"exact"}],"termid":"GO:0006035"}


id: PBO:0055952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 61","termid":"PBO:0055952"}


id: GO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of exogen","termid":"GO:0051887"},{"relation_name":"positively_regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of exogen","synonyms":[{"name":"activation of exogen","type":"narrow"},{"name":"positive regulation of exogen","type":"related"},{"name":"stimulation of exogen","type":"narrow"},{"name":"up regulation of exogen","type":"related"},{"name":"up-regulation of exogen","type":"related"},{"name":"upregulation of exogen","type":"related"}],"termid":"GO:0051888"}


id: PBO:0061405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide S","termid":"PBO:0061405"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: GO:0042428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"ammonium ion metabolic process","termid":"GO:0097164"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin metabolic process","synonyms":[{"name":"serotonin metabolism","type":"exact"}],"termid":"GO:0042428"}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["PomBase:mah","GO:0006915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0047984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2","termid":"PBO:0047984"}


id: FYPO:0004021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form polar microtubules that are longer than normal. Polar microtubules are the spindle microtubules that come from each pole and overlap at the spindle midzone.","definition_xrefs":["PomBase:mah","GO:0005827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"long polar microtubules","synonyms":[{"name":"elongated polar microtubules","type":"exact"},{"name":"long polar microtubules during mitotic cell cycle","type":"related"},{"name":"long polar microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004021"}


id: PBO:0029689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins","termid":"PBO:0029689"}


id: PBO:0027467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_endocytosis_during_meiotic_cell_cycle","termid":"PBO:0027467"}


id: GO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of preserving the structure and function of mature myelin. This includes maintaining the compact structure of myelin necessary for its electrical insulating characteristics as well as the structure of non-compact regions such as Schmidt-Lantermann clefts and paranodal loops. This does not include processes responsible for maintaining the nodes of Ranvier, which are not part of the myelin sheath.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"part_of","term_name":"myelination","termid":"GO:0042552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"myelin maintenance","synonyms":[{"name":"myelin sheath maintenance","type":"exact"}],"termid":"GO:0043217"}


id: PBO:0055972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and IQ motif containing 1","termid":"PBO:0055972"}


id: GO:0098555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the lumen.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of endoplasmic reticulum membrane","termid":"GO:0098553"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"lumenal side of rough endoplasmic reticulum membrane","termid":"GO:0098555"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: GO:0039018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephrostome over time, from its formation to the mature structure. The nephrostome is the opening of the pronephros into the body cavity.","definition_xrefs":["PMID:15647339","XAO:0000062","PMID:14686690","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrostome development","termid":"GO:0039018"}


id: PBO:0063173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide biosynthesis domain containing 1","termid":"PBO:0063173"}


id: RO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.\\n","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculates_with","termid":"RO:0002101"}


id: PBO:0053768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1013","termid":"PBO:0053768"}


id: PBO:0084113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p","termid":"PBO:0084113"}


id: GO:0085017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The invasion by a symbiont of a cell of a host organism, forming a vacuole in which the symbiont resides. The vacuole membrane is formed from lipids and proteins derived from both host and symbiont. Begins when the symbiont attaches on to the host cell membrane which invaginates and deepens as the symbiont enters, and ends when the host cell membrane closes behind the newly-formed vacuole.","definition_xrefs":["GOC:jl","PMID:18665841","PMID:8690024","PMID:9580555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into host cell by a symbiont-containing vacuole","secondary_identifiers":["GO:0052370"],"synonyms":[{"name":"symbiont entry into host cell forming a parasitophorous vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a pathogen-containing vacuole","type":"exact"},{"name":"symbiont entry into host cell forming a symbiont-containing vacuole","type":"related"}],"termid":"GO:0085017"}


id: GO:0046816
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle used to transport the partial or complete virion between cellular compartments.","definition_xrefs":["PMID:7933124","GOC:vesicles"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular vesicle","termid":"GO:0097708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion transport vesicle","termid":"GO:0046816"}


id: PBO:0074683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63E","termid":"PBO:0074683"}


id: PBO:0068256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal 3","termid":"PBO:0068256"}


id: PR:000037316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein Crb2 (Schizosaccharomyces pombe) that is phosphorylated in two Thr residues within CDK consensus TP motifs, and a Thr within the sequence VPETV. Example: UniProtKB:P87074-1, Thr-187/Thr-215/Thr-235, MOD:00047.","definition_xrefs":["PMID:24074952","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crb2/Phos:(T187,T215,T235)","pombase_gene_id":"SPBC342.05","synonyms":[{"name":"Crb2 phosphorylated","type":"related"},{"name":"DNA repair protein rhp9 phosphorylated 1 (Schizosaccharomyces pombe)","type":"related"},{"name":"crb2/Phos:(T187,T215,T235)","type":"exact"}],"termid":"PR:000037316"}


id: GO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the stereospecific transfer of asparagine or glutamine across a biological membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete asparagine/glutamine permease activity (obsolete GO:0015331)","synonyms":[{"name":"asparagine/glutamine permease activity","type":"exact"}],"termid":"GO:0015331"}


id: GO:0042399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ectoine (1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid), a tetrahydropyrimidine commonly synthesized by halophilic bacteria.","definition_xrefs":["PMID:11823218","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ectoine metabolic process","synonyms":[{"name":"ectoine metabolism","type":"exact"}],"termid":"GO:0042399"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PMID:24081329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: GO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl sulfoxide, DMSO (C2H6OS), an alkyl sulfoxide that is practically odorless in its purified form. As a highly polar organic liquid, it is a powerful solvent. Its biological activities include the ability to penetrate plant and animal tissues and to preserve living cells during freezing.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"dimethyl sulfoxide metabolic process","secondary_identifiers":["UM-BBD_pathwayID:sulf"],"synonyms":[{"name":"DMSO metabolic process","type":"exact"},{"name":"DMSO metabolism","type":"exact"},{"name":"dimethyl sulfoxide metabolism","type":"exact"},{"name":"dimethyl sulphoxide metabolic process","type":"exact"},{"name":"dimethyl sulphoxide metabolism","type":"exact"}],"termid":"GO:0018907"}


id: GO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of immune complex clearance by erythrocytes. The process often starts with binding of complement receptor 1 (CR1) on the surface of erythrocytes to a complement coated immune complex. The complex bound to erythrocyte CR1 is then transported to the liver or spleen where it is presented to phagocytes. The process ends when the complex is removed from CR1, allowing the erythrocyte to return to general circulation.","definition_xrefs":["PMID:24022490","GOC:add","PMID:11414352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex clearance","termid":"GO:0002434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance by erythrocytes","secondary_identifiers":["Wikipedia:Immune_complex"],"synonyms":[{"name":"immune complex clearance by RBCs","type":"exact"},{"name":"immune complex clearance by red blood cells","type":"exact"}],"termid":"GO:0002435"}


id: PBO:0085091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0085091"}


id: PBO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 115","termid":"PBO:0044828"}


id: GO:1990436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a MAP kinase cascade activated by oxidative stress relays one or more of the signals, MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase. Just FYI in pombe the osmotic stress and oxidative stress MAPK cascade involve many of the same proteins, but the pathways are slightly different, therefore Im req this term.","definition_xrefs":["PMID:10398679"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in oxidative stress signaling pathway (obsolete GO:1990436)","synonyms":[{"name":"MAPK cascade involved in oxidative stress signaling pathway","type":"exact"}],"termid":"GO:1990436"}


id: PBO:0054723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2132","termid":"PBO:0054723"}


id: GO:0070597
data:
  {"annotated_genes":["SJAG_04666","SJAG_01028","SJAG_00424","SJAG_02278","SJAG_04184","SJAG_02916","SJAG_00610","SJAG_04236","SJAG_03057"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72925,70801,71586,73108,77575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[90504,85156,88038,98264],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070597","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: GO:0120062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any gastric emptying process, the process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of gastric emptying","termid":"GO:0120060"},{"relation_name":"positively_regulates","term_name":"gastric emptying","termid":"GO:0035483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastric emptying","termid":"GO:0120062"}


id: PBO:0063876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 2","termid":"PBO:0063876"}


id: PBO:0029697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0029697"}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: PBO:0031837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_morphology","termid":"PBO:0031837"}


id: PBO:0074462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 4 pseudogene 2","termid":"PBO:0074462"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: PBO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana XCT","termid":"PBO:0016577"}


id: GO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-2B adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-2B adrenergic receptor binding","synonyms":[{"name":"alpha-2B adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031695"}


id: PR:000044735
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 12 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-20, Thr-22, Ser-64, Thr-95, Thr-151 and Ser-463 of the amino acid sequence represented by UniProtKB:Q10059. Example: UniProtKB:Q10059, Thr-20/Thr-22/Thr-95/Thr-151, MOD:00047|Ser-64/Ser-463, MOD:00046.","definition_xrefs":["PMID:29343550","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 12 (Schizosaccharomyces pombe)","termid":"PR:000044734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc12/Phos:(T20,T22,S64,T95,T151,S463)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"Spom-cdc12/Phos:1","type":"exact"},{"name":"UniProtKB:Q10059, Thr-20/Thr-22/Thr-95/Thr-151, MOD:00047|Ser-64/Ser-463, MOD:00046","type":"narrow"},{"name":"cdc12/Phos:(T20,T22,S64,T95,T151,S463)","type":"exact"}],"termid":"PR:000044735"}


id: GO:0008147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of bone","termid":"GO:0008147"}


id: PR:Q9USX7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.09","synonyms":[{"name":"Spom972h-ppk22","type":"exact"}],"termid":"PR:Q9USX7"}


id: GO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GOC:dgh","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination","secondary_identifiers":["Wikipedia:Myelin"],"synonyms":[{"name":"myelinogenesis","type":"related"}],"termid":"GO:0042552"}


id: PBO:0062925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y12","termid":"PBO:0062925"}


id: PBO:0046549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 3","termid":"PBO:0046549"}


id: PR:P0CT59
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2202 gene.","definition_xrefs":["UniProtKB:P0CT59","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S22-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.01","synonyms":[{"name":"Spom972h-rps2202","type":"exact"}],"termid":"PR:P0CT59"}


id: GO:0047947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + L-glutamine = CoA + alpha-N-phenylacetyl-L-glutamine.","definition_xrefs":["MetaCyc:GLUTAMINE-N-PHENYLACETYLTRANSFERASE-RXN","EC:2.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"glutamine N-phenylacetyltransferase activity","secondary_identifiers":["RHEA:21844"],"synonyms":[{"name":"glutamine phenylacetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine N-acetyltransferase activity","type":"related"},{"name":"phenylacetyl-CoA:L-glutamine alpha-N-phenylacetyltransferase activity","type":"related"}],"termid":"GO:0047947"}


id: PBO:0088334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates","termid":"PBO:0088334"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + polyprenylpyrophosphate = dimethylmenaquinone + diphosphate + CO2.","definition_xrefs":["RHEA:30099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenyltransferase activity","termid":"GO:0002094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate octaprenyltransferase activity","secondary_identifiers":["MetaCyc:DMK-RXN","EC:2.5.1.74"],"synonyms":[{"name":"1,4-Dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: PBO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1B2, pseudogene","termid":"PBO:0043025"}


id: PBO:0076516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 18 pseudogene","termid":"PBO:0076516"}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: GO:0102982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + NAD = H+ + UDP-3-keto-alpha-D-glucose + NADH.","definition_xrefs":["PMID:11278540","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"UDP-3-dehydro-alpha-D-glucose dehydrogenase activity","secondary_identifiers":["RHEA:35755","MetaCyc:RXN-9578"],"termid":"GO:0102982"}


id: PomGeneEx:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PomGeneEx:0000005"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein present","synonyms":[{"name":"protein expression present","type":"exact"}],"termid":"PomGeneEx:0000021"}


id: GO:0036058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a filtration diaphragm, a specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"filtration diaphragm assembly","termid":"GO:0036058"}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: PBO:0039692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid P component, serum","termid":"PBO:0039692"}


id: PBO:0066365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 8","termid":"PBO:0066365"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: PBO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine phosphatase Pyp2","termid":"PBO:0002880"}


id: PBO:0050106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 16","termid":"PBO:0050106"}


id: GO:0004487
data:
  {"annotated_genes":["SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70625],"is_not":false,"summary":null,"term":"GO:0004487"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NAD+ = 5,10-methenyltetrahydrofolate + NADH.","definition_xrefs":["EC:1.5.1.15","RHEA:22892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity","termid":"GO:0004486"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NAD+) activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:1.5.1.15-RXN","KEGG_REACTION:R01218","Reactome:R-HSA-6801462"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate dehydrogenase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:NAD+ oxidoreductase","type":"related"}],"termid":"GO:0004487","terms_by_termid":{"GO:0004487":null}}


id: PBO:0065460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 6","termid":"PBO:0065460"}


id: PBO:0058166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4460","termid":"PBO:0058166"}


id: PBO:0068899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 141, pseudogene","termid":"PBO:0068899"}


id: GO:0005177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A class of ligands for neurexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete neuroligin (obsolete GO:0005177)","synonyms":[{"name":"neuroligin","type":"exact"}],"termid":"GO:0005177"}


id: PBO:0058617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6749","termid":"PBO:0058617"}


id: GO:0102262
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104922],"is_not":false,"summary":null,"term":"GO:0102262"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil16 in tRNA + NAD(P) = H+ + a uracil16 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016491","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA-dihydrouridine16 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12454","EC:1.3.1.88"],"termid":"GO:0102262","terms_by_termid":{"GO:0102262":null}}


id: PBO:0042587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDR2 divergent transcript","termid":"PBO:0042587"}


id: PBO:0061384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 44","termid":"PBO:0061384"}


id: GO:0061591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a population of galactosylceramide molecules from one leaflet of the plasma membrane bilayer to the opposite leaflet as a result of a calcium stimulus.","definition_xrefs":["PMID:23532839","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium activated phospholipid scrambling","termid":"GO:0061588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"calcium activated galactosylceramide scrambling","termid":"GO:0061591"}


id: PBO:0077435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 169","termid":"PBO:0077435"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: PBO:0039216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C7, pseudogene","termid":"PBO:0039216"}


id: PBO:0004613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor (predicted)","termid":"PBO:0004613"}


id: GO:0036361
data:
  {"annotated_genes":["SJAG_00036","SJAG_04298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88073,112443],"is_not":false,"summary":null,"term":"GO:0036361"}]},"cv_name":"molecular_function","definition":"Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on amino acids and derivatives","termid":"GO:0016855"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"racemase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036361","terms_by_termid":{"GO:0036361":null}}


id: FYECO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which egtazic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ egtazic acid","synonyms":[{"name":"+ EGTA","type":"exact"},{"name":"EGTA added","type":"exact"},{"name":"egtazic acid added","type":"exact"}],"termid":"FYECO:0000411"}


id: GO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron; the series of U12-type spliceosomal complexes is involved in the splicing of the majority of introns that contain atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site.","definition_xrefs":["GOC:krc","PMID:11971955","PMID:11574683","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U12-type spliceosomal complex","secondary_identifiers":["Wikipedia:Minor_spliceosome"],"synonyms":[{"name":"AT-AC spliceosomal complex","type":"narrow"},{"name":"minor (U12-type) spliceosomal complex","type":"exact"},{"name":"minor spliceosomal complex","type":"exact"}],"termid":"GO:0005689"}


id: PBO:0045003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIM1 rRNA methyltransferase and ribosome maturation factor","termid":"PBO:0045003"}


id: PBO:0046859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor family member 2","termid":"PBO:0046859"}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: PBO:0084594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL012C-A was originally annotated as an independent ORF but due to a sequence change was merged with an adjacent ORF into a single reading frame, designated YJL012C/VTC4","termid":"PBO:0084594"}


id: PBO:0087056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27A; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27A has a paralog, RPL27B, that arose from the whole genome duplication","termid":"PBO:0087056"}


id: MOD:00171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-seryl-glycosylphosphatidylinositolethanolamine.","definition_xrefs":["PubMed:2111324","RESID:AA0162","PubMed:8448158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylphosphatidylinositolated residue","termid":"MOD:00818"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-seryl-glycosylphosphatidylinositolethanolamine","synonyms":[{"name":"GPISer","type":"exact"},{"name":"LIPID GPI-anchor amidated serine","type":"exact"},{"name":"N-seryl-glycosylphosphatidylinositolethanolamine","type":"exact"}],"termid":"MOD:00171"}


id: PBO:0068143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 450","termid":"PBO:0068143"}


id: PBO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine transporter (predicted)","termid":"PBO:0002594"}


id: PBO:0041221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 1","termid":"PBO:0041221"}


id: PBO:0028577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_farnesyltransferase_activity","termid":"PBO:0028577"}


id: GO:0022023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a radial glial cell in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"},{"relation_name":"part_of","term_name":"forebrain radial glial cell differentiation","termid":"GO:0021861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell fate commitment in forebrain","termid":"GO:0022023"}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: PBO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein 35","termid":"PBO:0050904"}


id: GO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to a host cell via adhesion molecules, general stickiness etc., either directly or indirectly.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell","termid":"GO:0044650"}


id: PR:Q9C103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eme1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease eme1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1E7.06c","synonyms":[{"name":"Spom972h-eme1","type":"exact"},{"name":"essential meiotic endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C103"}


id: PBO:0065163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion locus lncRNA, testis expressed","termid":"PBO:0065163"}


id: PBO:0079600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E3 divergent transcript","termid":"PBO:0079600"}


id: PBO:0034616
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiotic_recombination_double-strand_break_repair","termid":"PBO:0034616"}


id: PBO:0079934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional SNARE in the ER 1","termid":"PBO:0079934"}


id: FYPO:0006021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:28366642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0007536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006021"}


id: PBO:0064679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 15","termid":"PBO:0064679"}


id: GO:0009062
data:
  {"annotated_genes":["SJAG_00413","SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"cellular lipid catabolic process","termid":"GO:0044242"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0044248"],"is_obsolete":false,"name":"fatty acid catabolic process","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Fatty_acid_degradation"],"synonyms":[{"name":"fatty acid breakdown","type":"exact"},{"name":"fatty acid catabolism","type":"exact"},{"name":"fatty acid degradation","type":"exact"}],"termid":"GO:0009062","terms_by_termid":{"GO:0001561":null,"GO:0006635":null}}


id: PBO:0054814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2227","termid":"PBO:0054814"}


id: PBO:0086850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme; regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation","termid":"PBO:0086850"}


id: GO:0050693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's ligand binding domain (LBD) domain, found in nuclear receptors. In general, the LBDs consist of three layers comprised of twelve alpha-helices and several beta-strands that are organized around a lipophilic ligand-binding pocket.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"LBD domain binding","synonyms":[{"name":"ligand binding domain binding","type":"exact"}],"termid":"GO:0050693"}


id: FYPO:0000553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pseudohyphal growth is increased during a cellular hyperosmotic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased pseudohyphal growth","termid":"FYPO:0003776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased pseudohyphal growth during cellular hyperosmotic response","secondary_identifiers":["FYPO:0000438"],"synonyms":[{"name":"increased filamentous growth during cellular hyperosmotic response","type":"broad"}],"termid":"FYPO:0000553"}


id: GO:0031522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex involved in the translocation of proteins across the cytoplasmic membrane. In Gram-negative bacteria, Sec-translocated proteins are subsequently secreted via the type II, IV, or V secretion systems. Sec complex components include SecA, D, E, F, G, Y and YajC.","definition_xrefs":["GOC:mtg_sensu","PMID:15223057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cell envelope Sec protein transport complex","synonyms":[{"name":"Sec complex","type":"broad"},{"name":"Sec secretion complex","type":"narrow"},{"name":"Sec translocation complex","type":"narrow"},{"name":"plasma membrane Sec complex","type":"related"}],"termid":"GO:0031522"}


id: GO:1900649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dehydroaustinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"dehydroaustinol biosynthetic process","termid":"GO:1900563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of dehydroaustinol biosynthetic process","synonyms":[{"name":"regulation of dehydroaustinol anabolism","type":"exact"},{"name":"regulation of dehydroaustinol biosynthesis","type":"exact"},{"name":"regulation of dehydroaustinol formation","type":"exact"},{"name":"regulation of dehydroaustinol synthesis","type":"exact"}],"termid":"GO:1900649"}


id: PBO:0071646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 10","termid":"PBO:0071646"}


id: PBO:0074313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 divergent transcript","termid":"PBO:0074313"}


id: PBO:0053092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 2D","termid":"PBO:0053092"}


id: GO:0060608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of the neural tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"},{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"}


id: GO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of mercury (Hg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"},{"relation_name":"part_of","term_name":"detoxification of mercury ion","termid":"GO:0050787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mercury ion transport","synonyms":[{"name":"mercuric ion transport","type":"narrow"},{"name":"mercury transport","type":"exact"}],"termid":"GO:0015694"}


id: GO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK activity (obsolete GO:0000186)","synonyms":[{"name":"activation of MAP kinase kinase activity","type":"exact"},{"name":"activation of MAP/ERK kinase kinase","type":"exact"},{"name":"activation of MAP2K activity","type":"exact"},{"name":"activation of MAPKK activity during sporulation","type":"narrow"},{"name":"positive regulation of MAPKK activity","type":"broad"}],"termid":"GO:0000186"}


id: PBO:0055572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3008","termid":"PBO:0055572"}


id: GO:0014818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a skeletal muscle satellite cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:ef","PMID:16607119","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate determination","termid":"GO:0048867"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell commitment","termid":"GO:0014813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell fate determination","termid":"GO:0014818"}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: GO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"positive regulation of lamellipodium organization","termid":"GO:1902745"},{"relation_name":"positively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of lamellipodium assembly","synonyms":[{"name":"positive regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010592"}


id: GO:0103002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-hydroxypalmitate + NADP = H+ + 16-oxo-palmitate + NADPH.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16-hydroxypalmitate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9802"],"termid":"GO:0103002"}


id: GO:0010536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["GOC:dph","PMID:9135582","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of Janus kinase activity","termid":"GO:0010533"},{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"positively_regulates","term_name":"activation of Janus kinase activity","termid":"GO:0042976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of Janus kinase activity","secondary_identifiers":["GO:0010535","GO:0010537"],"synonyms":[{"name":"positive regulation of activation of JAK protein","type":"exact"},{"name":"positive regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK1 protein","type":"narrow"},{"name":"positive regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"positive regulation of activation of JAK2 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"positive regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"positive regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010536"}


id: PBO:0034314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_bound_by_sequence_of","termid":"PBO:0034314"}


id: PBO:0013079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisD","termid":"PBO:0013079"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: GO:0097538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located on the cilium membrane in the ciliary transition zone; it is connected to the cilium axoneme via Y-shaped links.","definition_xrefs":["GOC:cilia","PMID:22653444","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"ciliary membrane","termid":"GO:0060170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"ciliary necklace","synonyms":[{"name":"cilial necklace","type":"exact"},{"name":"cilium necklace","type":"exact"}],"termid":"GO:0097538"}


id: PBO:0079192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 21, pseudogene","termid":"PBO:0079192"}


id: GO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenanthrene-1,2-oxide + H2O = trans-1,2-dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenanthrene-1,2-epoxide hydrolase activity","termid":"GO:0018747"}


id: RO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x starts ends with y if and only if the time point at which x starts is equivalent to the time point at which y starts. Formally: x existence starts with y iff α(x) = α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_starts_during","termid":"RO:0002488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_starts_with","termid":"RO:0002489"}


id: GO:1904991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting dopamine receptor signaling pathway.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:26554819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:1904990"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","termid":"GO:0007195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"down regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"down-regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"down-regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"downregulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"downregulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"},{"name":"inhibition of adenylate cyclase-inhibiting dopamine receptor signaling pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylate cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"narrow"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"narrow"},{"name":"negative regulation of dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"negative regulation of inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:1904991"}


id: GO:0007132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase I, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis I.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"metaphase","termid":"GO:0051323"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051327","GO:0008150"],"is_obsolete":false,"name":"meiotic metaphase I","termid":"GO:0007132"}


id: PBO:0043259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 17","termid":"PBO:0043259"}


id: PBO:0029930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029930"}


id: GO:1990863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of acinar cells, resulting in the expansion of a cell population. An acinar cell is a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini (singular acinus).","definition_xrefs":["PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acinar cell proliferation","synonyms":[{"name":"acinic cell proliferation","type":"exact"},{"name":"acinous cell proliferation","type":"exact"}],"termid":"GO:1990863"}


id: GO:1902106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of leukocyte differentiation.","definition_xrefs":["GOC:add","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"is_a","term_name":"negative regulation of hemopoiesis","termid":"GO:1903707"},{"relation_name":"negatively_regulates","term_name":"leukocyte differentiation","termid":"GO:0002521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte differentiation","synonyms":[{"name":"down regulation of immune cell differentiation","type":"exact"},{"name":"down regulation of leucocyte differentiation","type":"exact"},{"name":"down regulation of leukocyte differentiation","type":"exact"},{"name":"down-regulation of immune cell differentiation","type":"exact"},{"name":"down-regulation of leucocyte differentiation","type":"exact"},{"name":"down-regulation of leukocyte differentiation","type":"exact"},{"name":"downregulation of immune cell differentiation","type":"exact"},{"name":"downregulation of leucocyte differentiation","type":"exact"},{"name":"downregulation of leukocyte differentiation","type":"exact"},{"name":"inhibition of immune cell differentiation","type":"narrow"},{"name":"inhibition of leucocyte differentiation","type":"narrow"},{"name":"inhibition of leukocyte differentiation","type":"narrow"},{"name":"negative regulation of immune cell differentiation","type":"exact"},{"name":"negative regulation of leucocyte differentiation","type":"exact"}],"termid":"GO:1902106"}


id: PBO:0029028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_interphase","termid":"PBO:0029028"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: GO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myosin light-chain phosphate + H2O = myosin light chain + phosphate.","definition_xrefs":["EC:3.1.3.53","MetaCyc:MYOSIN-LIGHT-CHAIN-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824","GO:0004721","GO:0140096"],"is_obsolete":false,"name":"myosin-light-chain-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-419232"],"synonyms":[{"name":"[Myosin light-chain]-phosphatase activity","type":"exact"},{"name":"myosin light chain kinase phosphatase activity","type":"related"},{"name":"myosin light-chain kinase phosphatase activity","type":"related"},{"name":"myosin-light-chain phosphatase activity","type":"related"},{"name":"myosin-light-chain-phosphate phosphohydrolase activity","type":"related"},{"name":"protein phosphatase 2A","type":"related"}],"termid":"GO:0050115"}


id: PBO:0070876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 7","termid":"PBO:0070876"}


id: GO:1901702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salt from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"salt transmembrane transporter activity","termid":"GO:1901702"}


id: GO:0051496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament bundle assembly","termid":"GO:0032233"},{"relation_name":"is_a","term_name":"regulation of stress fiber assembly","termid":"GO:0051492"},{"relation_name":"positively_regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0030036"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of stress fiber assembly","synonyms":[{"name":"activation of stress fiber formation","type":"narrow"},{"name":"positive regulation of stress fibre biosynthesis","type":"related"},{"name":"positive regulation of stress fibre formation","type":"related"},{"name":"stimulation of stress fiber formation","type":"narrow"},{"name":"up regulation of stress fiber formation","type":"related"},{"name":"up-regulation of stress fiber formation","type":"exact"},{"name":"upregulation of stress fiber formation","type":"related"}],"termid":"GO:0051496"}


id: PBO:0028514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028514"}


id: SO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the inactivation of a ligand binding site with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_loss_of_function_variant","termid":"SO:0001559"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive_ligand_binding_site","synonyms":[{"name":"inactive ligand binding site","type":"exact"}],"termid":"SO:0001560"}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73206],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motogenic signaling initiating cell movement in cerebral cortex","termid":"GO:0021807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: PBO:0005209
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae PET127","termid":"PBO:0005209"}


id: PBO:0038574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABRA C-terminal like","termid":"PBO:0038574"}


id: PBO:0078975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 3-1","termid":"PBO:0078975"}


id: GO:0014877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity","termid":"GO:0014870"},{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: PBO:0086826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL165W is not an essential gene","termid":"PBO:0086826"}


id: PR:Q9USK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp3 gene.","definition_xrefs":["UniProtKB:Q9USK6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBP3-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.17","synonyms":[{"name":"Spom972h-cbp3","type":"exact"}],"termid":"PR:Q9USK6"}


id: GO:0030711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of border follicle cell delamination","synonyms":[{"name":"activation of border follicle cell delamination","type":"narrow"},{"name":"positive regulation of border cell delamination","type":"broad"},{"name":"stimulation of border follicle cell delamination","type":"narrow"},{"name":"up regulation of border follicle cell delamination","type":"exact"},{"name":"up-regulation of border follicle cell delamination","type":"exact"},{"name":"upregulation of border follicle cell delamination","type":"exact"}],"termid":"GO:0030711"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: GO:1901857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular respiration.","definition_xrefs":["PMID:23150719","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"positively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of cellular respiration","synonyms":[{"name":"activation of cellular respiration","type":"narrow"},{"name":"activation of oxidative metabolic process","type":"exact"},{"name":"activation of oxidative metabolism","type":"exact"},{"name":"activation of respiration","type":"broad"},{"name":"positive regulation of oxidative metabolic process","type":"exact"},{"name":"positive regulation of oxidative metabolism","type":"exact"},{"name":"positive regulation of respiration","type":"broad"},{"name":"up regulation of cellular respiration","type":"exact"},{"name":"up regulation of oxidative metabolic process","type":"exact"},{"name":"up regulation of oxidative metabolism","type":"exact"},{"name":"up regulation of respiration","type":"broad"},{"name":"up-regulation of cellular respiration","type":"exact"},{"name":"up-regulation of oxidative metabolic process","type":"exact"},{"name":"up-regulation of oxidative metabolism","type":"exact"},{"name":"up-regulation of respiration","type":"broad"},{"name":"upregulation of cellular respiration","type":"exact"},{"name":"upregulation of oxidative metabolic process","type":"exact"},{"name":"upregulation of oxidative metabolism","type":"exact"},{"name":"upregulation of respiration","type":"broad"}],"termid":"GO:1901857"}


id: PBO:0029779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated_vegetative_cell","termid":"PBO:0029779"}


id: PBO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf22","termid":"PBO:0005787"}


id: PBO:0069468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 733, pseudogene","termid":"PBO:0069468"}


id: MOD:01091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-phenylalanine residue with one chlorine atom.","definition_xrefs":["DeltaMass:233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-phenylalanine","synonyms":[{"name":"Cl1Phe","type":"exact"}],"termid":"MOD:01091"}


id: PBO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5","termid":"PBO:0000840"}


id: GO:0045677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of R7cell differentiation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"is_a","term_name":"negative regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110118"},{"relation_name":"negatively_regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of R7 cell differentiation","synonyms":[{"name":"down regulation of R7 differentiation","type":"exact"},{"name":"down-regulation of R7 differentiation","type":"exact"},{"name":"downregulation of R7 differentiation","type":"exact"},{"name":"inhibition of R7 differentiation","type":"narrow"},{"name":"negative regulation of R7 differentiation","type":"exact"}],"termid":"GO:0045677"}


id: PBO:0079287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 6","termid":"PBO:0079287"}


id: GO:0042120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alginic acid metabolic process","synonyms":[{"name":"alginate metabolic process","type":"exact"},{"name":"alginate metabolism","type":"exact"},{"name":"alginic acid metabolism","type":"exact"}],"termid":"GO:0042120"}


id: GO:1990456
data:
  {"annotated_genes":["SJAG_04370","SJAG_03416","SJAG_01305","SJAG_01929","SJAG_03710"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70257,78503,102860,102991,111727],"is_not":false,"summary":null,"term":"GO:1990456"}]},"cv_name":"biological_process","definition":"The attachment of a mitochondrion and an endoplasmic reticulum via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_01929":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0140056","GO:0051179"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tethering","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"mitochondrion-ER attachment","type":"exact"},{"name":"mitochondrion-ER membrane tethering","type":"exact"},{"name":"mitochondrion-ER tethering","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum attachment","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum tethering","type":"exact"}],"termid":"GO:1990456","terms_by_termid":{"GO:1990456":null}}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: GO:0018040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glutamic acid amide by hydrolysis and oxidation of an interior Glu-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0087"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glutamic acid amidation (obsolete GO:0018040)","termid":"GO:0018040"}


id: PBO:0085489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source","termid":"PBO:0085489"}


id: GO:0035448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a thylakoid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of membrane","termid":"GO:0019898"},{"relation_name":"part_of","term_name":"thylakoid membrane","termid":"GO:0042651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of thylakoid membrane","synonyms":[{"name":"extrinsic to thylakoid membrane","type":"narrow"},{"name":"peripheral to thylakoid membrane","type":"exact"}],"termid":"GO:0035448"}


id: FYPO:0006907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type) when the cell re-enters the mitotic cell cycle following nitrogen starvation-induced arrest in G1 phase. A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PMID:872890","GO:0031568","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G1 cell size control checkpoint","termid":"FYPO:0006905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000257","FYPO:0001312","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase","synonyms":[{"name":"normal G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during mitotic cell cycle","type":"related"},{"name":"normal mitotic G1 cell size control checkpoint activation following nitrogen starvation-induced arrest in G1 phase","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint following nitrogen starvation-induced arrest in G1 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006907"}


id: GO:0098775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assembly of curli, extracellular fibers produced by enteric bacteria. This process occurs outside the cell, where it is coupled to secretion across the cell outer membrane via nucleation by elements of the transporter complex.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"curli assembly","termid":"GO:0098775"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: PBO:0049658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 12","termid":"PBO:0049658"}


id: PBO:0041222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1GALT1 pseudogene 2","termid":"PBO:0041222"}


id: SO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"RNA secondary structure that affects the stability of an RNA molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001957 RNA_stability_element (obsolete SO:0001957)","synonyms":[{"name":"rna stability element","type":"related"}],"termid":"SO:0001957"}


id: GO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADPH + H+ + O2 = 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-HSA hydroxylase activity","secondary_identifiers":["EC:1.14.13.-"],"termid":"GO:0034819"}


id: GO:0042440
data:
  {"annotated_genes":["SJAG_01155","SJAG_03173","SJAG_05283","SJAG_02896","SJAG_04944","SJAG_03862","SJAG_00097","SJAG_00366","SJAG_04109","SJAG_01372","SJAG_04397","SJAG_01786","SJAG_03961","SJAG_02876","SJAG_01192","SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77181,78576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[73940,100550,109065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[101952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[78492,67700,86635,87960,91334,112079,90020,91917],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[75877,71522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pigment metabolism","type":"exact"}],"termid":"GO:0042440","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0055785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 5","termid":"PBO:0055785"}


id: PBO:0057775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2278","termid":"PBO:0057775"}


id: GO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-fructose + NADH.","definition_xrefs":["MetaCyc:MANNITOL-2-DEHYDROGENASE-RXN","EC:1.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12084"],"synonyms":[{"name":"D-mannitol dehydrogenase activity","type":"related"},{"name":"D-mannitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050086"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: PBO:0040875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP2 inducible kinase","termid":"PBO:0040875"}


id: GO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ferrous ions (Fe2+) are oxidized to ferric ions (Fe3+) to generate energy, coupled to the reduction of carbon dioxide.","definition_xrefs":["ISBN:3131084111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using ferrous ions as electron donor","termid":"GO:0019411"}


id: PBO:0055714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMCD1 antisense RNA 1","termid":"PBO:0055714"}


id: SO:0000866
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift caused by deleting one base.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift","termid":"SO:0000865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_frameshift","synonyms":[{"name":"minus 1 frameshift","type":"exact"}],"termid":"SO:0000866"}


id: PBO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 6","termid":"PBO:0048237"}


id: PBO:0075839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 homolog, RNA polymerase II CTD phosphatase","termid":"PBO:0075839"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: PBO:0063366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 6","termid":"PBO:0063366"}


id: GO:0031524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving menthol, the monoterpene 2-isopropyl-5-methylcyclohexanol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"menthol metabolic process","synonyms":[{"name":"menthol metabolism","type":"exact"}],"termid":"GO:0031524"}


id: PBO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2475","termid":"PBO:0055059"}


id: GO:0035075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ecdysone stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ecdysone","termid":"GO:0035075"}


id: GO:0102713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A25 + 2-oxoglutarate(2-) + O2 = gibberellin A46 + succinate(2-) + carbon dioxide.","definition_xrefs":["EC:1.14.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gibberellin A25 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-6543"],"termid":"GO:0102713"}


id: GO:0047892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-apiose + 7-O-beta-D-glucosyl-5,7,4'-trihydroxyflavone = UDP + 7-O-(beta-D-apiofuranosyl-1,2-beta-D-glucosyl)-5,7,4'-trihydroxyflavone.","definition_xrefs":["MetaCyc:FLAVONE-APIOSYLTRANSFERASE-RXN","EC:2.4.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"flavone apiosyltransferase activity","secondary_identifiers":["RHEA:19153"],"synonyms":[{"name":"UDP-apiose:5,4'-dihydroxyflavone 7-O-beta-D-glucoside 2''-O-beta-D-apiofuranosyltransferase activity","type":"related"},{"name":"UDP-apiose:7-O-(beta-D-glucosyl)-flavone apiosyltransferase activity","type":"related"},{"name":"uridine diphosphoapiose-flavone apiosyltransferase activity","type":"related"}],"termid":"GO:0047892"}


id: GO:1903085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["PMID:11080161","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of sinapate ester biosynthetic process","synonyms":[{"name":"regulation of sinapate ester anabolism","type":"exact"},{"name":"regulation of sinapate ester biosynthesis","type":"exact"},{"name":"regulation of sinapate ester formation","type":"exact"},{"name":"regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903085"}


id: PBO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress activated MAP kinase interacting protein Sin1","termid":"PBO:0002666"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: PBO:0043998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone like 1","termid":"PBO:0043998"}


id: PBO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase (predicted)","termid":"PBO:0000864"}


id: PBO:0039294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 intronic transcript 1","termid":"PBO:0039294"}


id: GO:0072171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric tubule are generated and organized. A mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"},{"relation_name":"part_of","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric tubule morphogenesis","termid":"GO:0072171"}


id: PBO:0087439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit F of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087439"}


id: PR:Q09911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC30D11.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C30D11.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.14c","synonyms":[{"name":"Spom972h-SPAC30D11.14c","type":"exact"}],"termid":"PR:Q09911"}


id: PBO:0063154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator pseudogene 2","termid":"PBO:0063154"}


id: PBO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type zinc finger protein","termid":"PBO:0004656"}


id: PBO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone","termid":"PBO:0002269"}


id: PATO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001060 absolute efficiency (obsolete PATO:0001060)","termid":"PATO:0001060"}


id: PBO:0072509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 38","termid":"PBO:0072509"}


id: MOD:00048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-phospho-L-tyrosine.","definition_xrefs":["Unimod:21#Y","DeltaMass:0","OMSSA:8","PubMed:10226369","PubMed:1725475","RESID:AA0039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O4'-phospho-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-phosphonooxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(4-hydroxyphenyl)propanoic acid 4'-phosphate","type":"exact"},{"name":"2-azanyl-3-(4-phosphonooxyphenyl)propanoic acid","type":"exact"},{"name":"MOD_RES Phosphotyrosine","type":"exact"},{"name":"O4'-phospho-L-tyrosine","type":"exact"},{"name":"O4'-phosphorylated L-tyrosine","type":"exact"},{"name":"O4-phosphotyrosine","type":"exact"},{"name":"OPTyr","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Tyrosinyl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylationy","type":"exact"},{"name":"tyrosine phosphate","type":"exact"}],"termid":"MOD:00048"}


id: GO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-5 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-5 receptor activity","synonyms":[{"name":"IL-5 receptor activity","type":"exact"},{"name":"IL-5R","type":"exact"}],"termid":"GO:0004914"}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: GO:0055008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of cardiac muscle tissue are generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"},{"relation_name":"part_of","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue morphogenesis","synonyms":[{"name":"heart muscle morphogenesis","type":"exact"},{"name":"myocardium morphogenesis","type":"broad"}],"termid":"GO:0055008"}


id: GO:0106377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-ATP + H2O = 2-hydroxy-AMP + H+ + diphosphate.","definition_xrefs":["PMID:11139615","RHEA:67392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2-hydroxy-ATP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2395872"],"termid":"GO:0106377"}


id: PBO:0025433
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae Spt5","termid":"PBO:0025433"}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: PBO:0066165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding fox-1 homolog 2","termid":"PBO:0066165"}


id: PBO:0053730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 944","termid":"PBO:0053730"}


id: MOD:01698
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an amino group with a trimethylaminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated protonated-residue","termid":"MOD:00711"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino trimethylated protonated-residue","synonyms":[{"name":"N2Me3+Res","type":"exact"},{"name":"Trimethyl","type":"related"},{"name":"tri-Methylation","type":"related"}],"termid":"MOD:01698"}


id: GO:0044496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism decreases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of blood pressure in another organism","termid":"GO:0044495"},{"relation_name":"is_a","term_name":"negative regulation of blood pressure","termid":"GO:0045776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood pressure in another organism","synonyms":[{"name":"negative regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044496"}


id: GO:0018326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient acetylation of peptidyl-cysteine to form S-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0056"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via S-acetyl-L-cysteine (obsolete GO:0018326)","termid":"GO:0018326"}


id: GO:0047012
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105362],"is_not":false,"summary":null,"term":"GO:0047012"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one.","definition_xrefs":["MetaCyc:1.1.1.170-RXN","EC:1.1.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3-beta-hydroxy-4-alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity","type":"exact"},{"name":"3-beta-hydroxy-4-beta-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating) activity","type":"related"},{"name":"3-beta-hydroxy-4-beta-methylcholestenoate dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-4alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating)","type":"related"},{"name":"sterol 4-alpha-carboxylic decarboxylase activity","type":"related"}],"termid":"GO:0047012","terms_by_termid":{"GO:0047012":null}}


id: PBO:0057943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3667 host gene","termid":"PBO:0057943"}


id: PBO:0044904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 1","termid":"PBO:0044904"}


id: PR:O14224
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho GDP-dissociation inhibitor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho GDP-dissociation inhibitor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.06","secondary_identifiers":["UniProtKB:O14224"],"synonyms":[{"name":"Spom972h-ARHGDIG","type":"exact"},{"name":"rho GDI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14224"}


id: PBO:0063913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3CA divergent transcript","termid":"PBO:0063913"}


id: SO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001053 nested_transposon (obsolete SO:0001053)","termid":"SO:0001053"}


id: PBO:0052954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KTN1 antisense RNA 1","termid":"PBO:0052954"}


id: GO:0050589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leucocyanidin + 2-oxoglutarate + O2 = cis- or trans-dihydroquercetin + succinate + CO2 + 2 H2O.","definition_xrefs":["MetaCyc:1.14.11.19-RXN","EC:1.14.20.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leucocyanidin oxygenase activity","secondary_identifiers":["MetaCyc:RXN-602","GO:0045432"],"synonyms":[{"name":"anthocyanidin synthase activity","type":"related"},{"name":"leucoanthocyanidin dioxygenase activity","type":"related"},{"name":"leucoanthocyanidin hydroxylase","type":"related"},{"name":"leucocyanidin,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050589"}


id: GO:0004618
data:
  {"annotated_genes":["SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98786],"is_not":false,"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glycerate + ATP = 3-phospho-D-glyceroyl phosphate + ADP + H+.","definition_xrefs":["EC:2.7.2.3","RHEA:14801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphoglycerate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01512","Reactome:R-HSA-71850","MetaCyc:PHOSGLYPHOS-RXN","Reactome:R-HSA-70486"],"synonyms":[{"name":"3-PGK","type":"related"},{"name":"3-phosphoglycerate kinase activity","type":"related"},{"name":"3-phosphoglycerate phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric acid kinase activity","type":"related"},{"name":"3-phosphoglyceric acid phosphokinase activity","type":"related"},{"name":"3-phosphoglyceric kinase activity","type":"related"},{"name":"ATP-3-phospho-D-glycerate-1-phosphotransferase activity","type":"related"},{"name":"ATP:3-phospho-D-glycerate 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-3-phosphoglycerate 1-phosphotransferase activity","type":"related"},{"name":"PGK","type":"related"},{"name":"glycerate 3-phosphate kinase activity","type":"related"},{"name":"glycerophosphate kinase activity","type":"related"},{"name":"phosphoglyceric acid kinase activity","type":"related"},{"name":"phosphoglyceric kinase activity","type":"related"},{"name":"phosphoglycerokinase activity","type":"related"}],"termid":"GO:0004618","terms_by_termid":{"GO:0004618":null}}


id: GO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"guanosine pentaphosphate biosynthetic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine pentaphosphate anabolism","type":"exact"},{"name":"guanosine pentaphosphate biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate formation","type":"exact"},{"name":"guanosine pentaphosphate synthesis","type":"exact"}],"termid":"GO:0015973"}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: GO:0018775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxymuconate semialdehyde + H2O = formate + 2-oxopent-4-enoate.","definition_xrefs":["EC:3.7.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxymuconate-semialdehyde hydrolase activity","secondary_identifiers":["RHEA:14549","UM-BBD_enzymeID:e0139","MetaCyc:3.7.1.9-RXN"],"synonyms":[{"name":"2-hydroxymuconate-semialdehyde formylhydrolase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde hydrolase activity","type":"related"},{"name":"HMSH","type":"related"},{"name":"HOD hydrolase activity","type":"related"}],"termid":"GO:0018775"}


id: PBO:0080990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 21","termid":"PBO:0080990"}


id: PBO:0078162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 39","termid":"PBO:0078162"}


id: PBO:0080562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 2","termid":"PBO:0080562"}


id: PBO:0041864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 9","termid":"PBO:0041864"}


id: PBO:0080985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 1","termid":"PBO:0080985"}


id: GO:0044632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the rate of complement activation by the lectin pathway, in a different organism.","definition_xrefs":["PMID:20837040","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, lectin pathway in another organism (obsolete GO:0044632)","synonyms":[{"name":"negative regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044632"}


id: PBO:0013030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu66","termid":"PBO:0013030"}


id: PBO:0017461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_pathogen","termid":"PBO:0017461"}


id: GO:0000109
data:
  {"annotated_genes":["SJAG_03454","SJAG_02828","SJAG_02556","SJAG_00995","SJAG_04147","SJAG_00500","SJAG_01480","SJAG_01887","SJAG_03613","SJAG_04540","SJAG_00901","SJAG_03618","SJAG_00512","SJAG_02334","SJAG_01049","SJAG_03206","SJAG_03612"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[111796,111797,111818],"is_not":false,"summary":null,"term":"GO:0000109"},{"annotations":[86529,106387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070912"},{"annotations":[84111,86530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070913"},{"annotations":[106070,70205,74385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000110"},{"annotations":[72185,72565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000111"},{"annotations":[87783,98552,85945,107310,85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000112"},{"annotations":[106479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000113"},{"annotations":[72186,72566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"Any complex formed of proteins that act in nucleotide-excision repair.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_00512":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01049":null,"SJAG_01480":null,"SJAG_01887":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_03206":null,"SJAG_03454":null,"SJAG_03612":null,"SJAG_03613":null,"SJAG_03618":null,"SJAG_04147":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"UvrB-UvrC complex","type":"narrow"},{"name":"UvrBC complex","type":"narrow"}],"termid":"GO:0000109","terms_by_termid":{"GO:0000109":null,"GO:0000110":null,"GO:0000111":null,"GO:0000112":null,"GO:0000113":null,"GO:0070912":null,"GO:0070913":null,"GO:0071942":null}}


id: GO:0015116
data:
  {"annotated_genes":["SJAG_00671","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73539,84168],"is_not":false,"summary":null,"term":"GO:0015116"},{"annotations":[105400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"}]},"cv_name":"molecular_function","definition":"Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-3560789","Reactome:R-HSA-8875871","RHEA:34983","Reactome:R-HSA-427555"],"synonyms":[{"name":"sulfate permease activity","type":"related"},{"name":"sulphate transporter activity","type":"exact"}],"termid":"GO:0015116","terms_by_termid":{"GO:0008271":null,"GO:0015116":null}}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: PBO:0041461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 90","termid":"PBO:0041461"}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: PBO:0042898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 2","termid":"PBO:0042898"}


id: PBO:0035835
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_dimethylation_during_vegetative_growth","termid":"PBO:0035835"}


id: PBO:0059230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L2","termid":"PBO:0059230"}


id: PBO:0091441
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not appear to be the ortholog of S. cerevisiae CYB2, missing the N-term cytochrome B2 domain","termid":"PBO:0091441"}


id: GO:1901687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutathione derivative.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"glutathione derivative biosynthetic process","synonyms":[{"name":"glutathione derivative anabolism","type":"exact"},{"name":"glutathione derivative biosynthesis","type":"exact"},{"name":"glutathione derivative formation","type":"exact"},{"name":"glutathione derivative synthesis","type":"exact"}],"termid":"GO:1901687"}


id: GO:1905787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8692859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"regulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905787"}


id: FYPO:0000384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of macroautophagy is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased macroautophagy","synonyms":[{"name":"autophagy: increased","type":"broad"}],"termid":"FYPO:0000384"}


id: PBO:0083825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; phosphorylated during the cell cycle by cyclin-dependent kinases; sumoylated in an Mms21p-dependent manner; protein abundance increases in response to DNA replication stress","termid":"PBO:0083825"}


id: GO:1903060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein lipidation.","definition_xrefs":["GOC:TermGenie","GOC:rph","PMID:21909394","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"negative regulation of lipoprotein metabolic process","termid":"GO:0050748"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"negatively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein lipidation","synonyms":[{"name":"down regulation of lipid:protein modification","type":"exact"},{"name":"down regulation of protein amino acid lipidation","type":"exact"},{"name":"down regulation of protein lipidation","type":"exact"},{"name":"down-regulation of lipid:protein modification","type":"exact"},{"name":"down-regulation of protein amino acid lipidation","type":"exact"},{"name":"down-regulation of protein lipidation","type":"exact"},{"name":"downregulation of lipid:protein modification","type":"exact"},{"name":"downregulation of protein amino acid lipidation","type":"exact"},{"name":"downregulation of protein lipidation","type":"exact"},{"name":"inhibition of lipid:protein modification","type":"narrow"},{"name":"inhibition of protein amino acid lipidation","type":"narrow"},{"name":"inhibition of protein lipidation","type":"narrow"},{"name":"negative regulation of lipid:protein modification","type":"exact"},{"name":"negative regulation of protein amino acid lipidation","type":"exact"}],"termid":"GO:1903060"}


id: SO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uORF beginning with a codon other than AUG.","definition_xrefs":["PMID:27313038","PMID:26684391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uORF","termid":"SO:0002027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_AUG_initiated_uORF","synonyms":[{"name":"non AUG initiated uORF","type":"exact"}],"termid":"SO:0002151"}


id: PBO:0049950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1A antisense RNA 3","termid":"PBO:0049950"}


id: GO:0140208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that occurs as a result of mitochondrial fragmentation.","definition_xrefs":["PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process in response to mitochondrial fragmentation","synonyms":[{"name":"apoptosis in response to mitochondrial fragmentation","type":"exact"}],"termid":"GO:0140208"}


id: SO:0001379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_taurinomethyl_2_thiouridineis a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_taurinomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:099"],"synonyms":[{"name":"5-taurinomethyl-2-thiouridine","type":"exact"},{"name":"five taurinomethyl two thiouridine","type":"exact"},{"name":"tm5s2U","type":"exact"}],"termid":"SO:0001379"}


id: GO:0052574
data:
  {"annotated_genes":["SJAG_03818","SJAG_01784","SJAG_02954","SJAG_02950","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104882,108902,108909,108910,108920],"is_not":false,"summary":null,"term":"GO:0052574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galactose, a substance composed of D-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galactose metabolic process","termid":"GO:0052573"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"UDP-galactose biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP-D-galactopyranose biosynthesis","type":"exact"},{"name":"UDP-D-galactopyranose biosynthetic process","type":"exact"},{"name":"UDP-D-galactose biosynthesis","type":"exact"},{"name":"UDP-D-galactose biosynthetic process","type":"exact"},{"name":"UDP-galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthetic process","type":"exact"}],"termid":"GO:0052574","terms_by_termid":{"GO:0052574":null}}


id: PBO:0029823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_vegetative_cell","termid":"PBO:0029823"}


id: GO:0009272
data:
  {"annotated_genes":["SJAG_04878","SJAG_01029","SJAG_03705","SJAG_04666","SJAG_02278","SJAG_00876","SJAG_01321","SJAG_03723","SJAG_04850","SJAG_04771","SJAG_02684","SJAG_04238","SJAG_04184","SJAG_04236","SJAG_03587","SJAG_01453","SJAG_01426","SJAG_04073","SJAG_01290","SJAG_00218","SJAG_03646","SJAG_01835","SJAG_00610","SJAG_04868","SJAG_03123","SJAG_05272","SJAG_00096","SJAG_02727","SJAG_03483","SJAG_05285","SJAG_04789","SJAG_02192","SJAG_00974","SJAG_01028","SJAG_00978","SJAG_02222","SJAG_01171","SJAG_01963","SJAG_04728","SJAG_04668","SJAG_04851","SJAG_00310","SJAG_04483","SJAG_03057","SJAG_01288","SJAG_03013","SJAG_02916","SJAG_00424","SJAG_05001","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70464,70647,70797,71620,74388,78129,88930,89650,90812,96078,97881,99404,103924,112966,113371],"is_not":false,"summary":null,"term":"GO:0009272"},{"annotations":[90048],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87399,83965,85939,112844,109260],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[104596],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[99574,104370,112854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[84445],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034217"},{"annotations":[70801,72925,77575,73108,71586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[110941,101459,87219,83830,108360,103110,104598,87228],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[98057],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[97382,90665,103394,97383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[72139,71028,77064],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034221"},{"annotations":[88032,83284],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88038,90504,98264,85156],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[95647,88315],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a fungal-type cell wall. The fungal-type cell wall contains beta-glucan and may contain chitin.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"is_a","term_name":"fungal-type cell wall organization or biogenesis","termid":"GO:0071852"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00218":null,"SJAG_00310":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00876":null,"SJAG_00974":null,"SJAG_00978":null,"SJAG_01028":null,"SJAG_01029":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_02727":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_03723":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04728":null,"SJAG_04771":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04868":null,"SJAG_04878":null,"SJAG_05001":null,"SJAG_05272":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"fungal-type cell wall biogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"chitin- and beta-glucan-containing cell wall biogenesis","type":"narrow"},{"name":"fungal-type cell wall anabolism","type":"related"},{"name":"fungal-type cell wall biosynthetic process","type":"related"},{"name":"fungal-type cell wall formation","type":"related"},{"name":"fungal-type cell wall synthesis","type":"related"}],"termid":"GO:0009272","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0032995":null,"GO:0034217":null,"GO:0034221":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: GO:0033580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid at the surface of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation at cell surface (obsolete GO:0033580)","synonyms":[{"name":"protein amino acid galactosylation at cell surface","type":"exact"}],"termid":"GO:0033580"}


id: MOD:01037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two chlorine atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated tyrosine","termid":"MOD:00987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dichlorinated tyrosine","synonyms":[{"name":"Cl2Tyr","type":"exact"}],"termid":"MOD:01037"}


id: FYPO:0009050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of hydroxyurea and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hydroxyurea and methyl methanesulfonate","synonyms":[{"name":"resistance to hydroxyurea and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to hydroxyurea and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to hydroxyurea and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to hydroxyurea and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009050"}


id: PBO:0079732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 9 (pseudogene)","termid":"PBO:0079732"}


id: PBO:0050757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 19","termid":"PBO:0050757"}


id: FYPO:0002427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable spore with abnormal shape","synonyms":[{"name":"lethal; spore with abnormal shape","type":"exact"}],"termid":"FYPO:0002427"}


id: GO:0008866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannonate + NAD+ = D-fructuronate + H+ + NADH.","definition_xrefs":["EC:1.1.1.57","RHEA:15729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"fructuronate reductase activity","secondary_identifiers":["KEGG_REACTION:R02454","MetaCyc:MANNONOXIDOREDUCT-RXN"],"synonyms":[{"name":"D-mannonate dehydrogenase activity","type":"related"},{"name":"D-mannonate oxidoreductase activity","type":"related"},{"name":"D-mannonate:NAD oxidoreductase activity","type":"related"},{"name":"D-mannonate:NAD+ 5-oxidoreductase activity","type":"related"},{"name":"mannonate oxidoreductase activity","type":"related"},{"name":"mannonic dehydrogenase activity","type":"related"}],"termid":"GO:0008866"}


id: GO:2001190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"positively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"positive regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001190"}


id: PBO:0040736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 2","termid":"PBO:0040736"}


id: PR:P09202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fructose-1,6-bisphosphatase class 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.14c","secondary_identifiers":["UniProtKB:P09202"],"synonyms":[{"name":"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FBPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1198.14c","type":"related"},{"name":"Spom972h-fbp","type":"exact"}],"termid":"PR:P09202"}


id: GO:0046555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the deacetylation of xylans and xylo-oligosaccharides.","definition_xrefs":["EC:3.1.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"acetylxylan esterase activity","secondary_identifiers":["MetaCyc:3.1.1.72-RXN"],"termid":"GO:0046555"}


id: PBO:0003970
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mental retardation","termid":"PBO:0003970"}


id: PR:P40903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- isp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative subtilase-type proteinase isp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.04","synonyms":[{"name":"Spom972h-isp6","type":"exact"}],"termid":"PR:P40903"}


id: GO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of iron ion transport","synonyms":[{"name":"activation of iron ion transport","type":"narrow"},{"name":"positive regulation of iron transport","type":"exact"},{"name":"stimulation of iron ion transport","type":"narrow"},{"name":"up regulation of iron ion transport","type":"exact"},{"name":"up-regulation of iron ion transport","type":"exact"},{"name":"upregulation of iron ion transport","type":"exact"}],"termid":"GO:0034758"}


id: PBO:0045539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 1","termid":"PBO:0045539"}


id: PATO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased life span","synonyms":[{"name":"high life span","type":"exact"}],"termid":"PATO:0001603"}


id: PBO:0045024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 1","termid":"PBO:0045024"}


id: GO:1903649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoplasmic transport (obsolete GO:1903649)","synonyms":[{"name":"regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903649"}


id: GO:0023017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via a diffusible molecule.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via diffusible molecule (obsolete GO:0023017)","synonyms":[{"name":"signal transmission via diffusible molecule","type":"exact"},{"name":"signaling via diffusible mediator","type":"exact"}],"termid":"GO:0023017"}


id: PBO:0050252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 30","termid":"PBO:0050252"}


id: PBO:0062502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 2 pseudogene","termid":"PBO:0062502"}


id: PBO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 41","termid":"PBO:0061381"}


id: PBO:0054450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1847","termid":"PBO:0054450"}


id: GO:0010589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process within a leaf by which specific areas of cell differentiation are determined along a proximal/distal axis.","definition_xrefs":["PMID:18398054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf proximal/distal pattern formation","termid":"GO:0010589"}


id: PBO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi membrane protein 2","termid":"PBO:0048929"}


id: GO:0072174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"metanephric tubule morphogenesis","termid":"GO:0072173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule formation","termid":"GO:0072174"}


id: GO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extraocular skeletal muscle development","termid":"GO:0014727"}


id: PBO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF, N-terminal (4F5-like)","termid":"PBO:0090664"}


id: PBO:0002974
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K(m)=63 microM","termid":"PBO:0002974"}


id: GO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A projection from a cell or tissue that penetrates the host's cell wall and invaginates the host cell membrane.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"haustorium","termid":"GO:0085035"}


id: PBO:0051307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR1-1 (pseudogene)","termid":"PBO:0051307"}


id: PBO:0061750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative expression of androgen receptor regulating lncRNA","termid":"PBO:0061750"}


id: PBO:0109916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Gls1","termid":"PBO:0109916"}


id: PBO:0069823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1109, pseudogene","termid":"PBO:0069823"}


id: GO:1902932
data:
  {"annotated_genes":["SJAG_03538","SJAG_04018","SJAG_02406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[84763,108873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["PMID:23332010","GOC:TermGenie","GO_REF:0000058","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"positively_regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02406":null,"SJAG_03538":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of alcohol anabolism","type":"narrow"},{"name":"activation of alcohol biosynthesis","type":"narrow"},{"name":"activation of alcohol biosynthetic process","type":"narrow"},{"name":"activation of alcohol formation","type":"narrow"},{"name":"activation of alcohol synthesis","type":"narrow"},{"name":"positive regulation of alcohol anabolism","type":"exact"},{"name":"positive regulation of alcohol biosynthesis","type":"exact"},{"name":"positive regulation of alcohol formation","type":"exact"},{"name":"positive regulation of alcohol synthesis","type":"exact"},{"name":"positive regulation of solventogenesis","type":"broad"},{"name":"up regulation of alcohol anabolism","type":"exact"},{"name":"up regulation of alcohol biosynthesis","type":"exact"},{"name":"up regulation of alcohol biosynthetic process","type":"exact"},{"name":"up regulation of alcohol formation","type":"exact"},{"name":"up regulation of alcohol synthesis","type":"exact"},{"name":"up-regulation of alcohol anabolism","type":"exact"},{"name":"up-regulation of alcohol biosynthesis","type":"exact"},{"name":"up-regulation of alcohol biosynthetic process","type":"exact"},{"name":"up-regulation of alcohol formation","type":"exact"},{"name":"up-regulation of alcohol synthesis","type":"exact"},{"name":"upregulation of alcohol anabolism","type":"exact"},{"name":"upregulation of alcohol biosynthesis","type":"exact"},{"name":"upregulation of alcohol biosynthetic process","type":"exact"},{"name":"upregulation of alcohol formation","type":"exact"},{"name":"upregulation of alcohol synthesis","type":"exact"}],"termid":"GO:1902932","terms_by_termid":{"GO:0070452":null,"GO:0090180":null}}


id: PBO:0003626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucan synthesis-associated protein (predicted)","termid":"PBO:0003626"}


id: PBO:0089851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Pcc1","termid":"PBO:0089851"}


id: PBO:0081526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 436","termid":"PBO:0081526"}


id: GO:0102660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoylshikimate + coenzyme A = caffeoyl-CoA + shikimate.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA:shikimate O-(hydroxycinnamoyl)transferase activity","secondary_identifiers":["MetaCyc:RXN-2621"],"termid":"GO:0102660"}


id: PBO:0076509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 9","termid":"PBO:0076509"}


id: GO:0034565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-nitro-1,2-dihydro-1,3,5-triazine + 2 H2O = 1-nitro-1,3,5-triazinane-2,4-diol.","definition_xrefs":["UM-BBD_reactionID:r0872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1-nitro-1,2-dihydro-1,3,5-triazine hydrolase activity","secondary_identifiers":["EC:3.5.99.-"],"termid":"GO:0034565"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: PBO:0083516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MES1/YGR264C, which encodes methionyl-tRNA synthetase","termid":"PBO:0083516"}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: PBO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 9","termid":"PBO:0045651"}


id: PBO:0089856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent chromatin remodeller Ino80","termid":"PBO:0089856"}


id: PBO:0089533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase Ser3","termid":"PBO:0089533"}


id: FYPO:0006542
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during mitosis is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased RNA level during mitosis","synonyms":[{"name":"increased RNA accumulation during mitosis","type":"related"},{"name":"increased RNA level during M phase of mitotic cell cycle","type":"related"},{"name":"increased RNA level during mitosis during vegetative growth","type":"exact"},{"name":"increased RNA level during mitotic M phase","type":"related"},{"name":"increased mRNA level during mitosis","type":"narrow"},{"name":"increased transcript level during mitosis","type":"exact"}],"termid":"FYPO:0006542"}


id: PBO:0015699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3101","termid":"PBO:0015699"}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: PBO:0041029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain PHD finger transcription factor","termid":"PBO:0041029"}


id: PBO:0084203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; homolog of human GEN1; similar to S. cerevisiae endonuclease Rth1p","termid":"PBO:0084203"}


id: PBO:0064282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing M3","termid":"PBO:0064282"}


id: PBO:0055978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 1","termid":"PBO:0055978"}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: PBO:0029719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_lariat_intron_level","termid":"PBO:0029719"}


id: PR:O94673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C776.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.05","synonyms":[{"name":"Spom972h-SPBC776.05","type":"exact"}],"termid":"PR:O94673"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: PBO:0051690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex ATPase subunit","termid":"PBO:0051690"}


id: GO:1990516
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93637],"is_not":false,"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"The pathway by which a ribonucleotide is removed from DNA and replaced by a deoxyribonucleotide. The ribonucleotide is incised by RNase H2, and further excised by an endonuclease. The resulting 1 nt gap is then repaired by DNA polymerase and DNA ligase.","definition_xrefs":["PMID:12475934","PMID:22864116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication","termid":"GO:0070716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"ribonucleotide excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990516","terms_by_termid":{"GO:1990516":null}}


id: PBO:0017508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein associated with stress granule","termid":"PBO:0017508"}


id: GO:0033543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to trans-2-enoyl-CoA by 2,4-dienoyl-CoA reductase and delta3-delta2-enoyl-CoA isomerase; trans-2-enoyl-CoA returns to the core beta-oxidation pathway for further degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway","termid":"GO:0033543"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: GO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transforming growth factor beta binding","synonyms":[{"name":"TGF-beta binding","type":"exact"},{"name":"TGFbeta binding","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"}],"termid":"GO:0050431"}


id: PATO:0002243
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a fluid (liquid or gas) by virtue of the amount of fluid which passes through a given surface per unit time.","direct_ancestors":[{"relation_name":"is_a","term_name":"flow rate","termid":"PATO:0001574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluid flow rate","synonyms":[{"name":"volume flow rate","type":"exact"},{"name":"volumetric flow rate","type":"exact"}],"termid":"PATO:0002243"}


id: GO:0140584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA translocase activity that folds chromosomal DNA and catalytically extends the newly formed loop, driven by ATP hydrolysis.","definition_xrefs":["PMID:23074191","PMID:26499245","PMID:27210764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA translocase activity","termid":"GO:0015616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chromatin extrusion motor activity","synonyms":[{"name":"chromatin extrusion activity","type":"exact"}],"termid":"GO:0140584"}


id: PBO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 15","termid":"PBO:0071512"}


id: PBO:0084060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for yeast Rab family members; involved in ER to Golgi trafficking; exhibits GAP activity toward Ypt1p that is stimulated by Gyl1p, also acts on Sec4p; interacts with Gyl1p, Rvs161p and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; relocalizes from bud neck to cytoplasm upon DNA replication stress; GYP5 has a paralog, GYL1, that arose from the whole genome duplication","termid":"PBO:0084060"}


id: PBO:0053598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 626","termid":"PBO:0053598"}


id: GO:0060762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of branching involved in mammary gland duct morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of branching involved in mammary gland duct morphogenesis","termid":"GO:0060762"}


id: PBO:0057070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 151a","termid":"PBO:0057070"}


id: PBO:0030669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_18S_rRNA_level","termid":"PBO:0030669"}


id: GO:0032934
data:
  {"annotated_genes":["SJAG_02323","SJAG_00054","SJAG_02375","SJAG_01590","SJAG_00355","SJAG_01407","SJAG_01722","SJAG_03718","SJAG_01329","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76029,86107,97125,105135],"is_not":false,"summary":null,"term":"GO:0032934"},{"annotations":[106566,111350,70994,89832,103525,72028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to a sterol, a steroid containing a hydroxy group in the 3 position, closely related to cholestan-3-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"sterol binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0005498"],"synonyms":[{"name":"sterol carrier activity","type":"related"}],"termid":"GO:0032934","terms_by_termid":{"GO:0008142":null,"GO:0032934":null}}


id: PBO:0085756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in cell proliferation in response to nutrients; glucose-repressible; involved in signal transduction during cell proliferation in response to nutrients, specifically the establishment of stationary phase; identified as a regulator of IME2; phosphorylates Igo1p and Igo2p; substrate of Pho80p-Pho85p kinase","termid":"PBO:0085756"}


id: PBO:0081324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF114 antisense RNA 1","termid":"PBO:0081324"}


id: PBO:0088234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein","termid":"PBO:0088234"}


id: GO:0009403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"toxin biosynthetic process","synonyms":[{"name":"toxin anabolism","type":"exact"},{"name":"toxin biosynthesis","type":"exact"},{"name":"toxin formation","type":"exact"},{"name":"toxin synthesis","type":"exact"}],"termid":"GO:0009403"}


id: GO:2000793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in heart valve development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart valve development","synonyms":[{"name":"cell proliferation of cardiac valve development","type":"exact"},{"name":"cell proliferation of heart valve development","type":"exact"}],"termid":"GO:2000793"}


id: PBO:0028076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0028076"}


id: GO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-23 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-23 receptor binding","synonyms":[{"name":"IL-23","type":"narrow"},{"name":"interleukin-23 receptor ligand","type":"narrow"}],"termid":"GO:0045519"}


id: FYPO:0006568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic mismatch repair is abnormal. Meiotic mismatch repair is the identification and correction of base-base mismatches, small insertion-deletion loops, and regions of heterology that are present in duplex DNA formed with strands from two recombining molecules.","definition_xrefs":["PomBase:mah","GO:0000710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal DNA repair","termid":"FYPO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic mismatch repair","termid":"FYPO:0006568"}


id: PR:P50519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein hsp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.04c","synonyms":[{"name":"Spom972h-hsp9","type":"exact"}],"termid":"PR:P50519"}


id: PBO:0036125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_processing_during_vegetative_growth","termid":"PBO:0036125"}


id: GO:0045901
data:
  {"annotated_genes":["SJAG_02812","SJAG_02189"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66787,68560],"is_not":false,"summary":null,"term":"GO:0045901"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"positively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02189":null,"SJAG_02812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational elongation","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"activation of translational elongation","type":"narrow"},{"name":"stimulation of translational elongation","type":"narrow"},{"name":"up regulation of translational elongation","type":"exact"},{"name":"up-regulation of translational elongation","type":"exact"},{"name":"upregulation of translational elongation","type":"exact"}],"termid":"GO:0045901","terms_by_termid":{"GO:0045901":null}}


id: GO:0043652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the apoptotic cell by phagocytosis, by a neighboring cell or by a phagocyte.","definition_xrefs":["PMID:15536015","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis, engulfment","termid":"GO:0006911"},{"relation_name":"part_of","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"engulfment of apoptotic cell","synonyms":[{"name":"engulfment of apoptotic cell corpse","type":"exact"},{"name":"engulfment of cell corpse","type":"exact"}],"termid":"GO:0043652"}


id: PBO:0027686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_elongated_cell","termid":"PBO:0027686"}


id: GO:0021953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system neuron differentiation","termid":"GO:0021953"}


id: GO:0052113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the osmotic conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host osmotic environment (obsolete GO:0052113)","synonyms":[{"name":"adaptation to host osmotic environment","type":"exact"},{"name":"osmotic tolerance to host environment","type":"exact"}],"termid":"GO:0052113"}


id: PBO:0078995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 2-2","termid":"PBO:0078995"}


id: GO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the mitotic spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate layer of spindle pole body","termid":"GO:0005821"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"intermediate layer of mitotic spindle pole body","termid":"GO:0061498"}


id: GO:0097711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The docking of a cytosolic centriole/basal body to the plasma membrane via the ciliary transition fibers. In some species this may happen via an intermediate step, by first docking to the ciliary vesicle via the ciliary transition fibers. The basal body-ciliary vesicle then relocates to the plasma membrane, followed by the ciliary vesicle fusing with the plasma membrane, effectively attaching the basal body to the plasma membrane.","definition_xrefs":["PMID:13978319","PMID:23348840","PMID:23530209","PMID:25686250","PMID:26981235","Reactome:R-HSA-5620912.1","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0140056","GO:0051179"],"is_obsolete":false,"name":"ciliary basal body-plasma membrane docking","synonyms":[{"name":"anchoring of the basal body to the plasma membrane","type":"related"},{"name":"ciliary basal body docking","type":"exact"}],"termid":"GO:0097711"}


id: PBO:0040779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein","termid":"PBO:0040779"}


id: GO:0017000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic biosynthetic process","synonyms":[{"name":"antibiotic anabolism","type":"exact"},{"name":"antibiotic biosynthesis","type":"exact"},{"name":"antibiotic formation","type":"exact"},{"name":"antibiotic synthesis","type":"exact"}],"termid":"GO:0017000"}


id: GO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide) within a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular nucleoside transmembrane transporter activity (obsolete GO:0000259)","synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"exact"}],"termid":"GO:0000259"}


id: GO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction","secondary_identifiers":["NIF_Subcellular:sao1124888485","Wikipedia:Neuromuscular_junction"],"synonyms":[{"name":"NMJ","type":"related"},{"name":"motor endplate","type":"related"}],"termid":"GO:0031594"}


id: PBO:0090039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, implicated in vesicle-mediated transport","termid":"PBO:0090039"}


id: GO:0006121
data:
  {"annotated_genes":["SJAG_02398","SJAG_03920","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84546,84906,108392,111864],"is_not":false,"summary":null,"term":"GO:0006121"}]},"cv_name":"biological_process","definition":"The transfer of electrons from succinate to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex II.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, succinate to ubiquinone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"complex II (succinate to ubiquinone)","type":"related"},{"name":"mitochondrial electron transport, succinate to coenzyme Q","type":"exact"},{"name":"oxidative phosphorylation, succinate to ubiquinone","type":"exact"}],"termid":"GO:0006121","terms_by_termid":{"GO:0006121":null}}


id: PBO:0075374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 11","termid":"PBO:0075374"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["EC:4.1.1.5","MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0110349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 1","termid":"PBO:0110349"}


id: PBO:0091197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly","termid":"PBO:0091197"}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: GO:0043615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an astrocyte, a class of large neuroglial (macroglial) cells in the central nervous system, the largest and most numerous neuroglial cells in the brain and spinal cord.","definition_xrefs":["GOC:go_curators","CL:0000127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte cell migration","synonyms":[{"name":"astrocyte migration","type":"exact"},{"name":"astrocytic glial cell migration","type":"exact"}],"termid":"GO:0043615"}


id: PBO:0085792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; GFP-fusion protein is localized to the cytoplasm; transcription induced under conditions of zinc deficiency","termid":"PBO:0085792"}


id: PBO:0027068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_metabolic_process","termid":"PBO:0027068"}


id: PBO:0061640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 18","termid":"PBO:0061640"}


id: PR:Q9USV4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mep33 gene.","definition_xrefs":["UniProtKB:Q9USV4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export protein 33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.02","synonyms":[{"name":"Spom972h-mep33","type":"exact"}],"termid":"PR:Q9USV4"}


id: GO:1905182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of urease activity.","definition_xrefs":["PMID:16244137","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of urease activity","termid":"GO:1905181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urease activity","synonyms":[{"name":"activation of urea amidohydrolase activity","type":"narrow"},{"name":"activation of urease activity","type":"narrow"},{"name":"positive regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urease activity","type":"exact"},{"name":"up-regulation of urea amidohydrolase activity","type":"exact"},{"name":"up-regulation of urease activity","type":"exact"},{"name":"upregulation of urea amidohydrolase activity","type":"exact"},{"name":"upregulation of urease activity","type":"exact"}],"termid":"GO:1905182"}


id: PBO:0065968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog B","termid":"PBO:0065968"}


id: PBO:0047476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 3","termid":"PBO:0047476"}


id: GO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tRNA, transfer ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transmembrane transporter activity","termid":"GO:0051033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tRNA transmembrane transporter activity","termid":"GO:0051034"}


id: PBO:0027155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_glutamine_level","termid":"PBO:0027155"}


id: PBO:0027053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_microtubules","termid":"PBO:0027053"}


id: PBO:0065672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type T","termid":"PBO:0065672"}


id: GO:0043737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate.","definition_xrefs":["EC:3.1.21.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"deoxyribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.21.7-RXN"],"synonyms":[{"name":"DNase V activity","type":"related"},{"name":"Escherichia coli endodeoxyribonuclease V activity","type":"narrow"},{"name":"endodeoxyribonuclease V","type":"exact"},{"name":"endonuclease V activity","type":"broad"}],"termid":"GO:0043737"}


id: PBO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis inducing protein Mei3","termid":"PBO:0003305"}


id: PBO:0081907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 865","termid":"PBO:0081907"}


id: PBO:0068126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 433","termid":"PBO:0068126"}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["Unimod:772#P","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: PBO:0073231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SENP3-EIF4A1 readthrough (NMD candidate)","termid":"PBO:0073231"}


id: PBO:0030859
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization","termid":"PBO:0030859"}


id: PBO:0089234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein","termid":"PBO:0089234"}


id: PBO:0040368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 5","termid":"PBO:0040368"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["PomBase:mah","GO:0101017","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: GO:0031027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that in yeast consists of a large and a small subunit. Possesses glutamate synthase (NADH) activity.","definition_xrefs":["GOC:jl","PMID:7047525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase complex","termid":"GO:0031026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex (NADH)","termid":"GO:0031027"}


id: GO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects.","definition_xrefs":["PMID:20065995","ISBN:0781735149","PMID:20200518","PMID:18000958","GOC:add","PMID:18007680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type 2 immune response","synonyms":[{"name":"T-helper 2 type immune response","type":"narrow"},{"name":"Th2 immune response","type":"narrow"}],"termid":"GO:0042092"}


id: GO:0034260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of GTP hydrolysis by a GTPase.","definition_xrefs":["PMID:24335649","GO_REF:0000058","GOC:mah","PMID:16143306","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of GTPase activity","termid":"GO:0043087"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of GTPase activity","secondary_identifiers":["GO:0034259","GO:0034261","GO:1902881","GO:1902264"],"synonyms":[{"name":"down regulation of GTPase activity","type":"exact"},{"name":"down regulation of Rab GTPase activity","type":"narrow"},{"name":"down regulation of Ras GTPase activity","type":"narrow"},{"name":"down regulation of Rho GTPase activity","type":"narrow"},{"name":"down regulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"down-regulation of GTPase activity","type":"exact"},{"name":"down-regulation of Rab GTPase activity","type":"narrow"},{"name":"down-regulation of Ras GTPase activity","type":"narrow"},{"name":"down-regulation of Rho GTPase activity","type":"narrow"},{"name":"down-regulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"downregulation of GTPase activity","type":"exact"},{"name":"downregulation of Rab GTPase activity","type":"narrow"},{"name":"downregulation of Ras GTPase activity","type":"narrow"},{"name":"downregulation of Rho GTPase activity","type":"narrow"},{"name":"downregulation of regulation of Ran GTPase activity","type":"narrow"},{"name":"inhibition of GTPase activity","type":"narrow"},{"name":"inhibition of Rab GTPase activity","type":"narrow"},{"name":"inhibition of Ras GTPase activity","type":"narrow"},{"name":"inhibition of Rho GTPase activity","type":"narrow"},{"name":"inhibition of regulation of Ran GTPase activity","type":"narrow"},{"name":"negative regulation of Rab GTPase activity","type":"narrow"},{"name":"negative regulation of Ran GTPase activity","type":"narrow"},{"name":"negative regulation of Ras GTPase activity","type":"narrow"},{"name":"negative regulation of Rho GTPase activity","type":"narrow"},{"name":"negative regulation of guanosinetriphosphatase activity","type":"exact"}],"termid":"GO:0034260"}


id: PBO:0044452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 31, pseudogene","termid":"PBO:0044452"}


id: GO:0015137
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai","RHEA:33183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transporter activity","termid":"GO:0015142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"citrate transmembrane transporter activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["TC:2.A.29.7.2","Reactome:R-HSA-433104"],"synonyms":[{"name":"tricarboxylate transport protein","type":"related"}],"termid":"GO:0015137","terms_by_termid":{"GO:0071913":null}}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PBO:0074278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIRP. pseudogene 2","termid":"PBO:0074278"}


id: PBO:0078728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 3-2","termid":"PBO:0078728"}


id: PBO:0083388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083388"}


id: GO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}


id: FYPO:0003363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cytogamy does not occur. Cytogamy is the process that creates a single cell from two cells of complementary mating types.","definition_xrefs":["PomBase:mah","GO:0000755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000301","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytogamy","synonyms":[{"name":"conjugation without cellular fusion during mating","type":"related"},{"name":"cytogamy abolished","type":"exact"}],"termid":"FYPO:0003363"}


id: PBO:0073150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24B antisense RNA 1","termid":"PBO:0073150"}


id: GO:0006808
data:
  {"annotated_genes":["SJAG_03319","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70650,109022],"is_not":false,"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen utilization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0006808","terms_by_termid":{"GO:0006808":null}}


id: PBO:0060207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUS81 structure-specific endonuclease subunit","termid":"PBO:0060207"}


id: PBO:0060222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX interactor 1, dimerization protein","termid":"PBO:0060222"}


id: GO:0015158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of raffinose from one side of a membrane to the other. Raffinose occurs in plants almost as commonly as sucrose and is present in cereal grains, cotton seeds, and many legumes. It is synthesized from sucrose by transfer of a galactopyranoside from myo-inositol.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"raffinose transmembrane transporter activity","synonyms":[{"name":"raffinose permease","type":"related"}],"termid":"GO:0015158"}


id: PBO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6 pseudogene 1","termid":"PBO:0075234"}


id: GO:1902798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of snoRNA processing.","definition_xrefs":["GOC:TermGenie","PMID:24210919","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of snoRNA processing","termid":"GO:1902796"},{"relation_name":"is_a","term_name":"positive regulation of snoRNA metabolic process","termid":"GO:1903325"},{"relation_name":"positively_regulates","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016074"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0008150","GO:0016074","GO:0010467"],"is_obsolete":false,"name":"positive regulation of snoRNA processing","synonyms":[{"name":"activation of snoRNA processing","type":"narrow"},{"name":"up regulation of snoRNA processing","type":"exact"},{"name":"up-regulation of snoRNA processing","type":"exact"},{"name":"upregulation of snoRNA processing","type":"exact"}],"termid":"GO:1902798"}


id: GO:0043596
data:
  {"annotated_genes":["SJAG_04791","SJAG_02818","SJAG_01354","SJAG_02800","SJAG_00696","SJAG_01762","SJAG_00884","SJAG_04272","SJAG_05232","SJAG_00874","SJAG_00729","SJAG_01698","SJAG_02182","SJAG_03855","SJAG_04210","SJAG_00618","SJAG_02610","SJAG_02908","SJAG_03451","SJAG_02724","SJAG_04183","SJAG_02348","SJAG_02198","SJAG_02667","SJAG_05301","SJAG_03722","SJAG_03097","SJAG_02439","SJAG_01823","SJAG_00814","SJAG_02172","SJAG_00857","SJAG_01267","SJAG_02394","SJAG_04994","SJAG_03927","SJAG_04190","SJAG_04877","SJAG_02074","SJAG_00399","SJAG_02627","SJAG_03898","SJAG_04671","SJAG_04879","SJAG_04150","SJAG_00536","SJAG_00863","SJAG_03128","SJAG_03495","SJAG_00611","SJAG_00327","SJAG_03780","SJAG_00958","SJAG_05197","SJAG_01010","SJAG_04995","SJAG_00272","SJAG_00153","SJAG_00198","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76376,86124,86343,87589,88161,88585,90394,90634,91561,92856,94797,94908,96062,98290,98365,98718,99386,99551,99618,101777,102581,102677,103066,103166,103373,105221,105489,106503,106620,106876,107130,107938,108350,108371,108750,110254,110413,110530,113220],"is_not":false,"summary":null,"term":"GO:0043596"},{"annotations":[72689,70610,92949,74645],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005658"},{"annotations":[98241,75982,71085,74583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043625"},{"annotations":[110641,111372,106781],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005662"},{"annotations":[108027,76823,72498,102327,76188,75491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043599"},{"annotations":[107722],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043601"},{"annotations":[78740,94846,77130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031298"}]},"cv_name":"cellular_component","definition":"The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00198":null,"SJAG_00272":null,"SJAG_00327":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00611":null,"SJAG_00618":null,"SJAG_00696":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00857":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_00958":null,"SJAG_01010":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01698":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02172":null,"SJAG_02182":null,"SJAG_02198":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02439":null,"SJAG_02610":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02724":null,"SJAG_02800":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03097":null,"SJAG_03128":null,"SJAG_03451":null,"SJAG_03495":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04272":null,"SJAG_04671":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"nuclear replication fork","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0043596","terms_by_termid":{"GO:0005658":null,"GO:0005662":null,"GO:0031298":null,"GO:0043596":null,"GO:0043599":null,"GO:0043601":null,"GO:0043625":null}}


id: PBO:0043977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 3","termid":"PBO:0043977"}


id: PBO:0029171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_rapamycin","termid":"PBO:0029171"}


id: PBO:0109220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6S antisense RNA 1","termid":"PBO:0109220"}


id: PBO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 13","termid":"PBO:0060112"}


id: GO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an ergot alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"ergot alkaloid metabolic process","termid":"GO:0035836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"ergot alkaloid biosynthetic process","synonyms":[{"name":"ergot alkaloid anabolism","type":"exact"},{"name":"ergot alkaloid biosynthesis","type":"exact"},{"name":"ergot alkaloid formation","type":"exact"},{"name":"ergot alkaloid synthesis","type":"exact"}],"termid":"GO:0035837"}


id: GO:0010042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese ion","synonyms":[{"name":"response to manganese","type":"exact"}],"termid":"GO:0010042"}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


id: PBO:0052071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1","termid":"PBO:0052071"}


id: GO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell proliferation","synonyms":[{"name":"regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046640"}


id: PBO:0049726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 7","termid":"PBO:0049726"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: GO:0106024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of onset of pupariation.","definition_xrefs":["PMID:26510564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"negatively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pupariation","termid":"GO:0106024"}


id: GO:0022603
data:
  {"annotated_genes":["SJAG_02022","SJAG_02169","SJAG_00596","SJAG_03793","SJAG_00855","SJAG_00028","SJAG_03486","SJAG_04522","SJAG_01456","SJAG_00244","SJAG_03581","SJAG_04322","SJAG_00333","SJAG_04203","SJAG_02392","SJAG_00661","SJAG_03637","SJAG_04462","SJAG_01458","SJAG_03705","SJAG_02536","SJAG_01212","SJAG_00514","SJAG_00304","SJAG_01799","SJAG_00216","SJAG_00610","SJAG_03631","SJAG_04724","SJAG_00845","SJAG_00236","SJAG_04461","SJAG_02838","SJAG_04509","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91403,90162,85565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[112964,102200,106018,98887,83815,95207,111598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"},{"annotations":[86403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[98870,111427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[101803,97475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"},{"annotations":[102951,111697],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[99103,95643,100716,89336],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[104181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"},{"annotations":[110200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"},{"annotations":[108556,113604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022604"},{"annotations":[114298,114299,100702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008360"},{"annotations":[99928,86796,108252,91224,90168,113806],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000100"},{"annotations":[98263,88037,83666],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:2000769"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anatomical structure morphogenesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00216":null,"SJAG_00236":null,"SJAG_00244":null,"SJAG_00304":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_00855":null,"SJAG_01212":null,"SJAG_01456":null,"SJAG_01458":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02536":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_03793":null,"SJAG_04203":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anatomical structure morphogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:30664646":null},"synonyms":[{"name":"regulation of morphogenesis","type":"exact"}],"termid":"GO:0022603","terms_by_termid":{"GO:0008360":null,"GO:0010637":null,"GO:0022604":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0090141":null,"GO:0090258":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0057313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518a-1","termid":"PBO:0057313"}


id: PBO:0091759
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2108180_2108181insA","termid":"PBO:0091759"}


id: PBO:0065931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 5","termid":"PBO:0065931"}


id: GO:0097474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.","definition_xrefs":["GOC:jc","CL:0000573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron apoptotic process","termid":"GO:0051402"},{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell apoptotic process","synonyms":[{"name":"cone photoreceptor apoptotic process","type":"exact"}],"termid":"GO:0097474"}


id: PBO:0004353
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia","termid":"PBO:0004353"}


id: PBO:0090929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ferrous iron/manganese transmembrane transporter Pcl1","termid":"PBO:0090929"}


id: SO:0001784
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structural sequence alteration or rearrangement encompassing one or more genome fragments, with 4 or more breakpoints.","definition_xrefs":["NCBI:th","SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"},{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_structural_alteration","secondary_identifiers":["SO:1000146"],"synonyms":[{"name":"complex","type":"related"},{"name":"complex chromosomal mutation","type":"exact"},{"name":"complex_chromosomal_mutation","type":"exact"}],"termid":"SO:0001784"}


id: PBO:0039330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3","termid":"PBO:0039330"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: FYPO:0007837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at subtelomeric regions. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:31837996","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased nucleosome occupancy at subtelomere","synonyms":[{"name":"decreased nucleosome occupancy at subtelomere during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at subtelomere during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at subtelomere","type":"exact"}],"termid":"FYPO:0007837"}


id: GO:0043456
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75433],"is_not":false,"summary":null,"term":"GO:0043456"},{"annotations":[85399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the pentose-phosphate shunt, the process in which glucose is oxidized, coupled to NADPH synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of NADP metabolic process","termid":"GO:1902031"},{"relation_name":"regulates","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"regulation of pentose-phosphate shunt","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of pentose phosphate pathway","type":"exact"},{"name":"regulation of pentose phosphate shunt","type":"exact"},{"name":"regulation of pentose-phosphate pathway","type":"exact"}],"termid":"GO:0043456","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: GO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7R)-7-(5-carboxylato-5-oxopentanamido)deacetylcephalosporanate + D-glutamate = 2-oxoglutarate + cephalosporin C.","definition_xrefs":["EC:2.6.1.74","RHEA:14553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cephalosporin-C transaminase activity","secondary_identifiers":["MetaCyc:CEPHALOSPORIN-C-TRANSAMINASE-RXN","KEGG_REACTION:R03063"],"synonyms":[{"name":"L-alanine:cephalosporin-C aminotransferase activity","type":"related"},{"name":"cephalosporin C aminotransferase activity","type":"related"},{"name":"cephalosporin-C:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0047740"}


id: GO:0140366
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-stoichiometric protein complex formed by several galectins crosslinking glycosylated ligands to form a dynamic lattice. The galectin lattice modulates receptor kinase signaling and the functionality of membrane receptors, by regulating the diffusion, compartmentalization and endocytosis of plasma membrane glycoproteins and glycolipids.","definition_xrefs":["PMID:26092931","PMID:19021578","PMID:28893908","PMID:30951647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"galectin lattice","termid":"GO:0140366"}


id: PBO:0059114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 3","termid":"PBO:0059114"}


id: GO:1900441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900742"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"}],"termid":"GO:1900441"}


id: GO:0015951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine ribonucleotide is synthesized from another purine ribonucleotide.","definition_xrefs":["ISBN:0306444747","GOC:mah","ISBN:0471394831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine nucleotide interconversion","termid":"GO:0015950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleotide interconversion","termid":"GO:0015951"}


id: GO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative transcription elongation factor activity (obsolete GO:0008148)","synonyms":[{"name":"negative transcription elongation factor activity","type":"exact"}],"termid":"GO:0008148"}


id: GO:0035116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. The hindlimbs are the posterior limbs of an animal.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"hindlimb morphogenesis","termid":"GO:0035137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hindlimb morphogenesis","termid":"GO:0035116"}


id: PBO:0074472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 1","termid":"PBO:0074472"}


id: CHEBI:142517
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of (−)-borneol. A metabolite isolated from Ferula dissecta.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tschimganine","termid":"CHEBI:142517"}


id: FYPO:0002861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase (poly(U) polymerase) activity is decreased.","definition_xrefs":["PMID:17449726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal poly(U) polymerase activity","termid":"FYPO:0002860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(U) polymerase activity","synonyms":[{"name":"decreased RNA uridylyltransferase activity","type":"exact"},{"name":"decreased polynucleotide uridylyltransferase activity","type":"exact"},{"name":"reduced poly(U) polymerase activity","type":"exact"}],"termid":"FYPO:0002861"}


id: GO:0061086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of histone H3-K27 methylation. Histone H3-K27 methylation is the modification of histone H3 by addition of a methyl group to lysine at position 27 of the histone.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 methylation (obsolete GO:0061086)","termid":"GO:0061086"}


id: PBO:0045590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 1 (pseudogene)","termid":"PBO:0045590"}


id: GO:0140199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071878"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0140199"}


id: GO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ether","termid":"GO:0045472"}


id: PBO:0030431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_eisosome_filament","termid":"PBO:0030431"}


id: PBO:0057174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR325 host gene","termid":"PBO:0057174"}


id: PBO:0087537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprises Nat1p, Ard1p, Nat5p; acetylates many proteins to influence telomeric silencing, cell cycle, heat-shock resistance, mating, sporulation, early stages of mitophagy; protein abundance increases under DNA replication stress; mutations in human homolog X-linked NAA10 lead to Ogden syndrome (S37P) and intellectual disability (R116W); expression of human NAA10 and NAA15 can complement ard1 nat1 double mutant","termid":"PBO:0087537"}


id: PBO:0068587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 38, pseudogene","termid":"PBO:0068587"}


id: PBO:0088623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt2","termid":"PBO:0088623"}


id: FYPO:0003457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of homocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular homocysteine level","synonyms":[{"name":"increased cellular homocysteine level during mitotic cell cycle","type":"related"},{"name":"increased cellular homocysteine level during vegetative growth","type":"exact"},{"name":"increased homocysteine accumulation","type":"related"}],"termid":"FYPO:0003457"}


id: GO:0042854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"eugenol metabolic process","synonyms":[{"name":"4-allyl-2-methoxyphenol metabolic process","type":"exact"},{"name":"4-allyl-2-methoxyphenol metabolism","type":"exact"},{"name":"eugenic acid metabolic process","type":"exact"},{"name":"eugenic acid metabolism","type":"exact"},{"name":"eugenol metabolism","type":"exact"}],"termid":"GO:0042854"}


id: PBO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 53","termid":"PBO:0048342"}


id: PBO:0073664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal-induced proliferation-associated 1","termid":"PBO:0073664"}


id: PBO:0060910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurite extension and migration factor","termid":"PBO:0060910"}


id: FYPO:0004936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter that contains a pombe cell cycle box (PCB) by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["GO:0000978","SO:0001871","PMID:12411492","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","termid":"FYPO:0002003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished DNA binding at PCB","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished at PCB","type":"exact"},{"name":"abolished DNA binding at pombe cell cycle box","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at PCB","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at pombe cell cycle box","type":"exact"},{"name":"abolished transcription factor binding to PCB-containing promoter region","type":"related"}],"termid":"FYPO:0004936"}


id: PBO:0069074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 321, pseudogene","termid":"PBO:0069074"}


id: _global:has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a relation between a process and a continuant, in which the continuant is somehow involved in the process","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_participant","secondary_identifiers":["RO:0000057"],"termid":"_global:has_participant"}


id: PBO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 34","termid":"PBO:0070499"}


id: PBO:0040228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4","termid":"PBO:0040228"}


id: GO:0140461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The organization of chromatin into heterochromatin at the subtelomeric region of a chromosome.","definition_xrefs":["PMID:26744419"],"gene_count":0,"genotype_count":0,"name":"obsolete subtelomeric heterochromatin organization (obsolete GO:0140461)","termid":"GO:0140461"}


id: PBO:0073579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 1","termid":"PBO:0073579"}


id: SO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that can be substituted for a related gene at a different site in the genome.","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene_cassette"],"synonyms":[{"name":"gene cassette","type":"exact"}],"termid":"SO:0005853"}


id: PR:Q09196
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light polypeptide 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin regulatory light chain cdc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.08","secondary_identifiers":["UniProtKB:Q09196"],"synonyms":[{"name":"Spom972h-MYL6","type":"exact"}],"termid":"PR:Q09196"}


id: GO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cleavage within ITS2 to generate the mature 5'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"generation of mature 5'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at C1","type":"narrow"}],"termid":"GO:0000477"}


id: PBO:0055460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2893","termid":"PBO:0055460"}


id: PBO:0084693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0084693"}


id: PBO:0091376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 2","termid":"PBO:0091376"}


id: GO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cellular spore derived from the products of mitosis. A cellular spore is a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and dessication resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"},{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a cellular spore","synonyms":[{"name":"asexual reproduction resulting in the formation of a cellular spore","type":"exact"},{"name":"asexual sporulation resulting in the formation of a viable spore","type":"broad"}],"termid":"GO:0043936"}


id: GO:0060818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on the paternal X-chromosome in the XX sex by genomic imprinting.","definition_xrefs":["PMID:18425126","PMID:23578369","GOC:dph","PMID:16789828","GOC:tb","PMID:11743158","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"},{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"inactivation of paternal X chromosome by genomic imprinting","synonyms":[{"name":"iXCI","type":"related"},{"name":"inactivation of paternal X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060818"}


id: GO:0033323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate CDP-choline.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via CDP-choline","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism via CDP-choline","type":"exact"},{"name":"choline biosynthesis via CDP-choline","type":"exact"},{"name":"choline formation via CDP-choline","type":"exact"},{"name":"choline synthesis via CDP-choline","type":"exact"}],"termid":"GO:0033323"}


id: GO:0097346
data:
  {"annotated_genes":["SJAG_03033","SJAG_02872","SJAG_03839","SJAG_03579","SJAG_02303","SJAG_00873","SJAG_05020","SJAG_04989","SJAG_05282","SJAG_02385","SJAG_02798","SJAG_01611","SJAG_04097","SJAG_02990","SJAG_02466","SJAG_05192","SJAG_03036","SJAG_01465","SJAG_03694","SJAG_03145","SJAG_01016","SJAG_04355","SJAG_02549","SJAG_00045","SJAG_02500","SJAG_02571","SJAG_04596","SJAG_00746","SJAG_00735"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104353,104863,97013,89708,84599,97139,108341,94638,72206,107458,72474,89602,94878,109394,70211,83570,110525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[76064,94465,108505,93750,78681,104361,97141,103210,107460,112528,92194,83741,109871,87989,108344,73371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A chromatin remodeling protein complex initially purified from S. cerevisiae and containing more than 10 subunits, including the SWR1-related complexes. INO80 (inositol requiring 80)-type complexes have diverse functions, including promoting transcriptional activation and DNA repair.","definition_xrefs":["GOC:rb","PMID:19355820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00735":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_01016":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03839":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"INO80-type complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0097346","terms_by_termid":{"GO:0000812":null,"GO:0031011":null}}


id: GO:0140931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral L-amino acid(out) + Na+(out) + Cl-(out) = neutral L-amino acid(in) + Na+(in)+ Cl-(in).","definition_xrefs":["PMID:19478081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"neutral L-amino acid:sodium:chloride symporter activity","synonyms":[{"name":"neutral amino acid:sodium:chloride symporter activity","type":"exact"}],"termid":"GO:0140931"}


id: GO:0140683
data:
  {"annotated_genes":["SJAG_03997","SJAG_02401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89676,98632],"is_not":false,"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a di or a monomethyl-lysine residue at position 9 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16603238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3K9 demethylase activity","termid":"GO:0032454"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674","GO:0032452","GO:0140096"],"is_obsolete":false,"name":"histone H3K9me/H3K9me2 demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:60188","EC:1.14.11.65"],"synonyms":[{"name":"histone H3-di/monomethyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone H3K9me demethylase activity","type":"broad"},{"name":"histone H3K9me2 demethylase activity","type":"broad"}],"termid":"GO:0140683","terms_by_termid":{"GO:0140683":null}}


id: PR:Q9USW4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-coenzyme A transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21B10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.09","secondary_identifiers":["UniProtKB:Q9USW4"],"synonyms":[{"name":"Spom972h-SLC33A1","type":"exact"}],"termid":"PR:Q9USW4"}


id: GO:0047628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + thymidine = AMP + thymidine 5'-phosphate.","definition_xrefs":["EC:2.7.1.118","MetaCyc:ADP--THYMIDINE-KINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ADP-thymidine kinase activity","secondary_identifiers":["RHEA:13413"],"synonyms":[{"name":"ADP:dThd phosphotransferase activity","type":"related"},{"name":"ADP:thymidine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine diphosphate-thymidine phosphotransferase activity","type":"related"}],"termid":"GO:0047628"}


id: RO:0002009
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that applies between a cell(c) and a gene(g) , where the process of 'transcription, DNA templated (GO_0006351)' is occuring in in cell c and that process has input gene g.","direct_ancestors":[{"relation_name":"is_a","term_name":"expresses","termid":"RO:0002292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell_expresses","termid":"RO:0002009"}


id: FYPO:0000225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a spore assumes a snowman shape, having two connected parts, roughly spherical, of different sizes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"snowman-shaped spore","synonyms":[{"name":"cell morphology, snowman during sporulation","type":"related"},{"name":"snowman during sporulation","type":"related"}],"termid":"FYPO:0000225"}


id: PBO:0082844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat protein required for ER transport vesicle budding; essential factor in endoplasmic reticulum exit site (ERES) formation, as well as in COPII-mediated ER-to-Golgi traffic; bound to periphery of ER membranes and may act to stabilize initial COPII complexes; interacts with Sec23p, Sec24p and Sec31p","termid":"PBO:0082844"}


id: PBO:0039265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 16 family member A1","termid":"PBO:0039265"}


id: GO:0009050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycopeptides, a compound in which carbohydrate is covalently attached to an oligopeptide composed of residues of L and/or D-amino acids. The term usually denotes a product of proteolytic degradation of a glycoprotein but includes glycated peptide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"glycopeptide catabolic process","synonyms":[{"name":"glycopeptide breakdown","type":"exact"},{"name":"glycopeptide catabolism","type":"exact"},{"name":"glycopeptide degradation","type":"exact"}],"termid":"GO:0009050"}


id: PBO:0086014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP fusion protein localizes to endoplasmic reticulum (ER) while mCherry fusion localizes to both ER and vacuole","termid":"PBO:0086014"}


id: PATO:0002360
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition that can be compared on a linear scale - that is that it can be increased or decreased.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disposition","termid":"PATO:0001727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendency","termid":"PATO:0002360"}


id: GO:0046506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfolipid, a compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.","definition_xrefs":["PMID:9751667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"sulfolipid metabolic process","termid":"GO:0046505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sulfolipid biosynthetic process","synonyms":[{"name":"sulfolipid anabolism","type":"exact"},{"name":"sulfolipid biosynthesis","type":"exact"},{"name":"sulfolipid formation","type":"exact"},{"name":"sulfolipid synthesis","type":"exact"},{"name":"sulpholipid biosynthesis","type":"exact"},{"name":"sulpholipid biosynthetic process","type":"exact"}],"termid":"GO:0046506"}


id: GO:0042594
data:
  {"annotated_genes":["SJAG_03256","SJAG_00233","SJAG_04067","SJAG_00781","SJAG_03486","SJAG_04725","SJAG_00380","SJAG_03048","SJAG_04031","SJAG_03309","SJAG_00169","SJAG_04873","SJAG_02380","SJAG_04743","SJAG_02973","SJAG_02026","SJAG_01245","SJAG_00209","SJAG_04032","SJAG_01970","SJAG_03519","SJAG_00534","SJAG_01509","SJAG_02699","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75191,90256,90782,104955,71648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[95902,75255,75352,111599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[99190,89701,89693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[71926,108529,102915,108530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[77193,76140,90210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[110705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[99238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[98219,99241],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[83619,96843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[97815],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02699":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04725":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to starvation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0042594","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1901481":null,"GO:1901482":null,"GO:1904547":null,"GO:1905287":null}}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: PBO:0079055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 11-1","termid":"PBO:0079055"}


id: PBO:0068086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 392","termid":"PBO:0068086"}


id: GO:0035591
data:
  {"annotated_genes":["SJAG_04259","SJAG_01047","SJAG_03625","SJAG_02332","SJAG_00317","SJAG_04943","SJAG_01199","SJAG_04666","SJAG_02098","SJAG_03342","SJAG_03602","SJAG_00117","SJAG_03081","SJAG_00209","SJAG_01605","SJAG_04671","SJAG_04509","SJAG_01464","SJAG_01188","SJAG_04503"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75189,83674,84966,88044,88453,89541,93948,94691,94859,97204,102437,106673,107688,108979,110598,112219],"is_not":false,"summary":null,"term":"GO:0035591"},{"annotations":[112453,95440,70389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005078"},{"annotations":[104314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030159"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two or more molecules in a signaling pathway, permitting those molecules to function in a coordinated way. Adaptor molecules themselves do not have catalytic activity.","definition_xrefs":["PMID:19104498","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00209":null,"SJAG_00317":null,"SJAG_01047":null,"SJAG_01188":null,"SJAG_01199":null,"SJAG_01464":null,"SJAG_01605":null,"SJAG_02098":null,"SJAG_02332":null,"SJAG_03081":null,"SJAG_03342":null,"SJAG_03602":null,"SJAG_03625":null,"SJAG_04259":null,"SJAG_04503":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04671":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"signaling adaptor activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"signaling protein recruiting activity","type":"exact"},{"name":"signaling scaffold activity","type":"related"},{"name":"signalling adaptor activity","type":"exact"}],"termid":"GO:0035591","terms_by_termid":{"GO:0005078":null,"GO:0030159":null,"GO:0035591":null}}


id: PBO:0062726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 5","termid":"PBO:0062726"}


id: PBO:0091436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091436"}


id: PBO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by stress","termid":"PBO:0001412"}


id: GO:0045474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of an insect (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ether stimulus.","definition_xrefs":["GOC:jid","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete response to ether (sensu Insecta) (obsolete GO:0045474)","synonyms":[{"name":"response to ether (sensu Insecta)","type":"exact"}],"termid":"GO:0045474"}


id: PBO:0014592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-tethered transcription factor Sre2","termid":"PBO:0014592"}


id: FYPO:0000069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of thiabendazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to thiabendazole","synonyms":[{"name":"resistance to TBZ","type":"exact"},{"name":"resistance to thiabendazole during mitotic cell cycle","type":"related"},{"name":"resistance to thiabendazole during vegetative growth","type":"exact"},{"name":"resistant to TBZ","type":"exact"},{"name":"resistant to thiabendazole","type":"exact"}],"termid":"FYPO:0000069"}


id: PBO:0027184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_F-actin_level_in_actomyosin_contractile_ring_during_anaphase_B","termid":"PBO:0027184"}


id: PBO:0004736
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.17","termid":"PBO:0004736"}


id: PBO:0061901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor kappa 1","termid":"PBO:0061901"}


id: GO:0030617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators.","definition_xrefs":["PMID:9759503"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor, inhibitory cytoplasmic mediator activity (obsolete GO:0030617)","synonyms":[{"name":"TGF-beta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"TGFbeta receptor, inhibitory cytoplasmic mediator activity","type":"exact"},{"name":"inhibitory SMAD protein","type":"related"}],"termid":"GO:0030617"}


id: GO:0038006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to contribute to the directed movement of a motile cell towards a higher concentration of netrin.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"netrin receptor activity","termid":"GO:0005042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"netrin receptor activity involved in chemoattraction","synonyms":[{"name":"attractive netrin receptor activity","type":"exact"},{"name":"netrin receptor activity involved in positive chemotaxis","type":"exact"}],"termid":"GO:0038006"}


id: GO:0031908
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a glyoxysome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glyoxysomal lumen","termid":"GO:0031908"}


id: GO:1903966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monounsaturated fatty acid.","definition_xrefs":["GOC:hjd","GO_REF:0000068","GOC:TermGenie","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monounsaturated fatty acid biosynthetic process","synonyms":[{"name":"monounsaturated fatty acid anabolism","type":"exact"},{"name":"monounsaturated fatty acid biosynthesis","type":"exact"},{"name":"monounsaturated fatty acid formation","type":"exact"},{"name":"monounsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:1903966"}


id: PBO:0073303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine active site containing 1","termid":"PBO:0073303"}


id: SO:1000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000112 sequence_variant_causing_no_3D_structural_change (obsolete SO:1000112)","synonyms":[{"name":"mutation causing no 3D structural change","type":"related"},{"name":"sequence variant causing no 3D structural change","type":"exact"}],"termid":"SO:1000112"}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: PBO:0074098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 1","termid":"PBO:0074098"}


id: GO:0033116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["GOC:mah","PMID:16723730","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116"}


id: PBO:0043702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 8","termid":"PBO:0043702"}


id: PBO:0064459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with ZNF domain","termid":"PBO:0064459"}


id: GO:1900865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any RNA modification that takes place in chloroplast.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast RNA modification","synonyms":[{"name":"RNA editing in chloroplast","type":"narrow"}],"termid":"GO:1900865"}


id: GO:0033309
data:
  {"annotated_genes":["SJAG_03845","SJAG_02810","SJAG_00987","SJAG_00693"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75067,76396,76451,107322],"is_not":false,"summary":null,"term":"GO:0033309"}]},"cv_name":"cellular_component","definition":"A protein complex that binds to the Swi4/6 cell cycle box (SCB) promoter element, consensus sequence CRCGAAA, and activates transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Swi4p and the activator Swi6p, and is associated with additional proteins known as Whi5p and Msa1p.","definition_xrefs":["PMID:19150335","PMID:11206552","PMID:7917338","GOC:mah","PMID:18160399","PMID:15838511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00693":null,"SJAG_00987":null,"SJAG_02810":null,"SJAG_03845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"SBF transcription complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"SBF complex","type":"exact"}],"termid":"GO:0033309","terms_by_termid":{"GO:0033309":null}}


id: PBO:0072003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 5","termid":"PBO:0072003"}


id: GO:0031891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoactive intestinal polypeptide receptor binding","termid":"GO:0031890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 1 vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"type 1 vasoactive intestinal polypeptide receptor ligand","type":"narrow"},{"name":"type 2 PACAP receptor binding","type":"exact"}],"termid":"GO:0031891"}


id: GO:0034525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-naphthaldehyde + NAD+ + H2O = 1-naphthoic acid + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r0787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-naphthaldehyde dehydrogenase activity","termid":"GO:0034525"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: GO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during mitosis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear mitotic chromosome (obsolete GO:0000230)","synonyms":[{"name":"nuclear mitotic chromosome","type":"exact"}],"termid":"GO:0000230"}


id: GO:1904338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","PMID:15522889","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"}


id: PBO:0074882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 61","termid":"PBO:0074882"}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: FYPO:0006824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:12479804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle pole body","synonyms":[{"name":"advanced protein localization to mitotic spindle pole body","type":"exact"},{"name":"precocious protein localization to mitotic spindle pole body","type":"related"},{"name":"premature protein localisation to mitotic spindle pole body","type":"exact"},{"name":"premature protein localization to mitotic SPB","type":"exact"},{"name":"premature protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006824"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: FYPO:0005033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abnormal protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen depletion","type":"exact"},{"name":"abnormal protein phosphorylation during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0005033"}


id: PBO:0081924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 962, pseudogene","termid":"PBO:0081924"}


id: PBO:0088465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation HECT-type ubiquitin-protein ligase E3 Ipa1","termid":"PBO:0088465"}


id: GO:2000479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of AMPK","type":"related"},{"name":"regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"regulation of PKA","type":"related"},{"name":"regulation of PKA C","type":"related"},{"name":"regulation of STK22","type":"related"},{"name":"regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000479"}


id: GO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one monocyte to one or more other monocytes via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte aggregation","termid":"GO:0070486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"monocyte aggregation","synonyms":[{"name":"mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:0070487"}


id: PBO:0044838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 126","termid":"PBO:0044838"}


id: GO:1904541
data:
  {"annotated_genes":["SJAG_03444","SJAG_00667","SJAG_01171","SJAG_02718","SJAG_01888","SJAG_01017","SJAG_05001","SJAG_03646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84033,84821,89619,95612,97384,97385,103395,106552],"is_not":false,"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"Any fungal-type cell wall disassembly that is involved in conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:25825517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization involved in conjugation with cellular fusion","termid":"GO:0070871"},{"relation_name":"is_a","term_name":"fungal-type cell wall disassembly","termid":"GO:0071853"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"fungal-type cell wall disassembly involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall disassembly involved in cell fusion","type":"related"},{"name":"fungal-type cell wall disassembly involved in mating","type":"related"}],"termid":"GO:1904541","terms_by_termid":{"GO:1904541":null}}


id: PR:000050397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the cut12 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"SPBC649.05","type":"related"},{"name":"Spom-cut12","type":"exact"},{"name":"cell untimely torn protein 12 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cut12","type":"related"},{"name":"stf1","type":"related"}],"termid":"PR:000050397"}


id: PBO:0043042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrolectin","termid":"PBO:0043042"}


id: GO:1901164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophoblast cell migration","synonyms":[{"name":"down regulation of trophoblast cell migration","type":"exact"},{"name":"down-regulation of trophoblast cell migration","type":"exact"},{"name":"downregulation of trophoblast cell migration","type":"exact"},{"name":"inhibition of trophoblast cell migration","type":"narrow"}],"termid":"GO:1901164"}


id: PBO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2230","termid":"PBO:0054817"}


id: RO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"RO:0002336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","termid":"RO:0002015"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: GO:0042587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface.","definition_xrefs":["PMID:12179957","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"glycogen granule","secondary_identifiers":["NIF_Subcellular:sao1081228141"],"synonyms":[{"name":"glycogen particle","type":"exact"}],"termid":"GO:0042587"}


id: PBO:0067486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 620, pseudogene","termid":"PBO:0067486"}


id: GO:0072523
data:
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