# terms

id: PBO:0041857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 4","termid":"PBO:0041857"}


id: SO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a vaultRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaultRNA_primary_transcript","synonyms":[{"name":"vaultRNA primary transcript","type":"exact"}],"termid":"SO:0002040"}


id: GO:0010043
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89366,89365],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc","type":"exact"}],"termid":"GO:0010043","terms_by_termid":{"GO:0010312":null}}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: FYPO:0003617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin D. Cells stop growing (and may die) at a concentration of cytochalasin D that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cytochalasin D","synonyms":[{"name":"hypersensitive to cytochalasin D","type":"exact"},{"name":"sensitive to cytochalasin D during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin D during vegetative growth","type":"exact"}],"termid":"FYPO:0003617"}


id: PBO:0083073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dimeric hypoxanthine-guanine phosphoribosyltransferase; catalyzes the transfer of the phosphoribosyl portion of 5-phosphoribosyl-alpha-1-pyrophosphate to a purine base (either guanine or hypoxanthine) to form pyrophosphate and a purine nucleotide (either guanosine monophosphate or inosine monophosphate); mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0083073"}


id: PBO:0043024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP1B antisense RNA 1","termid":"PBO:0043024"}


id: FYPO:0005557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin unloading is decreased during the mitotic cell cycle. Cohesin unloading is the topological unlinking of a cohesin ring complex from chromatin, which negatively regulates sister chromatid cohesion.","definition_xrefs":["GO:0061781","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic cohesin unloading","synonyms":[{"name":"decreased cohesin unloading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin unloading during vegetative growth","type":"exact"},{"name":"reduced cohesin unloading","type":"exact"}],"termid":"FYPO:0005557"}


id: GO:0015862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of uridine, uracil riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"uridine transport","termid":"GO:0015862"}


id: PBO:0046644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 25","termid":"PBO:0046644"}


id: PBO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 1","termid":"PBO:0047735"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PBO:0067288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 371, pseudogene","termid":"PBO:0067288"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: PBO:0049856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT domain E3 ubiquitin protein ligase 4","termid":"PBO:0049856"}


id: PBO:0083709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-membrane protein; subunit of evolutionarily conserved EMC (Endoplasmic Reticulum Membrane Complex) implicated in ERAD (ER-associated degradation) and proper assembly of multi-pass transmembrane (TM) proteins; EMC acts in yeast as an ER-mitochondria tether that interacts with outer membrane protein Tom5 of TOM (Translocase of the Mitochondrial Outer Membrane) complex; suppressor of pma1-7, deletion of SOP4 slows down export of wild-type Pma1p and Pma1-7 from the ER","termid":"PBO:0083709"}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["KEGG_REACTION:R08370","MetaCyc:RXN-8550","EC:4.2.3.38"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: GO:0043178
data:
  {"annotated_genes":["SJAG_03325","SJAG_03362","SJAG_02591","SJAG_00233","SJAG_04131"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98979,71924,96774,86286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000822"},{"annotations":[95006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030975"}]},"cv_name":"molecular_function","definition":"Binding to an alcohol, any of a class of alkyl compounds containing a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_02591":null,"SJAG_03325":null,"SJAG_03362":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alcohol binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0043178","terms_by_termid":{"GO:0000822":null,"GO:0030975":null}}


id: GO:0086103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An G protein-coupled receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["PMID:17376402","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"heart process","termid":"GO:0003015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in heart process","synonyms":[{"name":"G-protein coupled receptor signaling pathway involved in heart process","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in heart process","type":"exact"},{"name":"GPCR signaling pathway involved in cardiac process","type":"exact"},{"name":"GPCR signaling pathway involved in heart process","type":"exact"}],"termid":"GO:0086103"}


id: GO:0019367
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76708,87575],"is_not":false,"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"Elongation of a saturated fatty acid chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation","termid":"GO:0030497"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid elongation, saturated fatty acid","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:FASYN-ELONG-PWY"],"termid":"GO:0019367","terms_by_termid":{"GO:0019367":null}}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: GO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + diphosphate = glycerol 1-phosphate + H+ + phosphate.","definition_xrefs":["RHEA:13689","EC:2.7.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diphosphate-glycerol phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.79-RXN","KEGG_REACTION:R01044"],"synonyms":[{"name":"PPi-glycerol phosphotransferase activity","type":"related"},{"name":"diphosphate:glycerol 1-phosphotransferase activity","type":"related"},{"name":"pyrophosphate--glycerol phosphotransferase activity","type":"related"}],"termid":"GO:0047331"}


id: FYPO:0008020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing leucine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on leucine nitrogen source","synonyms":[{"name":"decreased growth on leucine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on leucine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with leucine nitrogen source","type":"narrow"},{"name":"reduced cell population growth on leucine nitrogen source","type":"exact"},{"name":"slow cell growth on leucine nitrogen source","type":"narrow"}],"termid":"FYPO:0008020"}


id: GO:0003333
data:
  {"annotated_genes":["SJAG_04957","SJAG_00522","SJAG_04983","SJAG_01096","SJAG_02113","SJAG_05342","SJAG_02029","SJAG_03400","SJAG_00543","SJAG_03829","SJAG_02947","SJAG_02716","SJAG_00991","SJAG_03827","SJAG_00015","SJAG_00877","SJAG_04903","SJAG_06598","SJAG_03591","SJAG_02955","SJAG_02133","SJAG_04718","SJAG_04588","SJAG_00051","SJAG_03970","SJAG_02150","SJAG_01994","SJAG_01923","SJAG_04725","SJAG_03256","SJAG_02605","SJAG_04295","SJAG_04296","SJAG_01998","SJAG_01770","SJAG_04135","SJAG_02946","SJAG_02144","SJAG_00149","SJAG_01636","SJAG_04715","SJAG_04984","SJAG_04787","SJAG_01336","SJAG_00626","SJAG_04637","SJAG_05346","SJAG_00019","SJAG_02941","SJAG_03899","SJAG_02062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73026,74761,74885,75428,75894,75915,76641,76657,77473,78498,78709,78858,85412,95494,98925,113287,113288,113289,113290,113291,113292,113293,113294,113481],"is_not":false,"summary":null,"term":"GO:0003333"},{"annotations":[75991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[98217,105299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[92101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015810"},{"annotations":[86086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[90178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[99428,99429,99430,91262,99427,92875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990822"},{"annotations":[114015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[93737,95707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[105300,98218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903714"},{"annotations":[91583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902475"},{"annotations":[95829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[92890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[99237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[63325,94326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[93738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110141"},{"annotations":[99239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[92102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015813"},{"annotations":[92891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[99240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[95830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99241,98219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[92892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[105301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[99243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[99244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[76703,103236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[83848],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[94382,87372,88924,105802],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[88925],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[94383,88926,87373],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[96674,95822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[86299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported across a membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane 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acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"amino acid membrane transport","type":"exact"}],"termid":"GO:0003333","terms_by_termid":{"GO:0003333":null,"GO:0015810":null,"GO:0015813":null,"GO:0032974":null,"GO:0034488":null,"GO:0034490":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0110141":null,"GO:0140300":null,"GO:1901482":null,"GO:1902475":null,"GO:1903712":null,"GO:1903714":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1990575":null,"GO:1990591":null,"GO:1990818":null,"GO:1990822":null}}


id: PBO:0085638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Get4p; required for efficient mating; involved in shmoo formation and nuclear migration in the pre-zygote; associates with ribosomes","termid":"PBO:0085638"}


id: PBO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YJR086W is not functional ortholog","termid":"PBO:0004783"}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: GO:0060692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the salivary gland. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in salivary gland development","termid":"GO:0060692"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: PBO:0071130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 132","termid":"PBO:0071130"}


id: PBO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Gfh1","termid":"PBO:0004702"}


id: PBO:0053576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 597","termid":"PBO:0053576"}


id: PBO:0034235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in_positive_regulation_of","termid":"PBO:0034235"}


id: FYPO:0006915
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[114514,114517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle process normally (i.e. indistinguishably from wild type). A cell cycle process is any of the processes that form part of the cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_04883":null},"genotype_count":3,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle process","references_by_uniquename":{"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_00601","SJAG_01355"],"single_locus_genotype_uniquenames":["ptp4delta","cox6delta","rip1delta"],"termid":"FYPO:0006915","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000590":null,"FYPO:0001007":null}}


id: PBO:0085480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable mitochondrial seryl-tRNA synthetase; mutant displays increased invasive and pseudohyphal growth","termid":"PBO:0085480"}


id: PBO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.19","termid":"PBO:0003979"}


id: PBO:0081403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 251","termid":"PBO:0081403"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: PBO:0053459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 412","termid":"PBO:0053459"}


id: PBO:0056824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14B","termid":"PBO:0056824"}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113346],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467","GO:0044248"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: PBO:0076951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 1 induced transcript 1","termid":"PBO:0076951"}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: PBO:0081685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF606 antisense RNA 1","termid":"PBO:0081685"}


id: GO:0042841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucuronate metabolic process","termid":"GO:0042839"},{"relation_name":"is_a","term_name":"glucuronate biosynthetic process","termid":"GO:0046399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-glucuronate biosynthetic process","synonyms":[{"name":"D-glucuronate anabolism","type":"exact"},{"name":"D-glucuronate biosynthesis","type":"exact"},{"name":"D-glucuronate formation","type":"exact"},{"name":"D-glucuronate synthesis","type":"exact"}],"termid":"GO:0042841"}


id: PBO:0043997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic somatomammotropin hormone 2","termid":"PBO:0043997"}


id: PBO:0026864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation_following_normal_mitosis","termid":"PBO:0026864"}


id: GO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","PMID:15771591","PMID:15224092","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002474"}


id: PBO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 33","termid":"PBO:0039517"}


id: PBO:0026798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_regulatory_particle_binding","termid":"PBO:0026798"}


id: PBO:0028217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation_during_cellular_response_to_salt_stress","termid":"PBO:0028217"}


id: FYPO:0003632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one gene product (RNA or protein) to a ribonucleoprotein complex is abnormal. The gene product whose binding to the ribonucleoprotein complex is affected may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ribonucleoprotein complex binding","synonyms":[{"name":"abnormal RNP binding","type":"exact"}],"termid":"FYPO:0003632"}


id: RO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","termid":"RO:0002429"}


id: GO:0009436
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96491,100449],"is_not":false,"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"glyoxylate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYOXDEG-PWY"],"synonyms":[{"name":"glyoxylate breakdown","type":"exact"},{"name":"glyoxylate catabolism","type":"exact"},{"name":"glyoxylate degradation","type":"exact"}],"termid":"GO:0009436","terms_by_termid":{"GO:0009436":null}}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: PBO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","termid":"PBO:0003093"}


id: PATO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's direction approximating the shape of a circle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circling direction","termid":"PATO:0001904"}


id: PBO:0084205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcriptional repressor; binds Mcm1p and early cell cycle box (ECB) elements of cell cycle regulated genes, thereby restricting ECB-mediated transcription to the M/G1 interval; YHP1 has a paralog, YOX1, that arose from the whole genome duplication","termid":"PBO:0084205"}


id: PBO:0081436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF286A-TBC1D26 readthrough (NMD candidate)","termid":"PBO:0081436"}


id: PBO:0001471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9","termid":"PBO:0001471"}


id: PATO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity toward","synonyms":[{"name":"decreased sensitivity","type":"exact"},{"name":"low sensitivity toward","type":"exact"}],"termid":"PATO:0001550"}


id: PBO:0041304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 6","termid":"PBO:0041304"}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: GO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Insertion of the male copulatory spicules into the hermaphrodite. Spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spicule insertion","termid":"GO:0034609"}


id: PBO:0039047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL5 intronic transcript 1","termid":"PBO:0039047"}


id: PBO:0073459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A2","termid":"PBO:0073459"}


id: GO:0032121
data:
  {"annotated_genes":["SJAG_01777","SJAG_05196","SJAG_03092","SJAG_03287","SJAG_05260"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83171,85465,95387,98236,100464],"is_not":false,"summary":null,"term":"GO:0032121"}]},"cv_name":"biological_process","definition":"The meiotic cell cycle process in which physical connections are formed between telomeric heterochromatin and the spindle pole body, facilitating bouquet formation.","definition_xrefs":["PMID:16615890","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_05196":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"meiotic attachment of telomeric heterochromatin to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to spindle pole body","type":"broad"},{"name":"attachment of telomeric chromatin to spindle pole body","type":"broad"}],"termid":"GO:0032121","terms_by_termid":{"GO:0032121":null}}


id: PBO:0076450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tafazzin, phospholipid-lysophospholipid transacylase","termid":"PBO:0076450"}


id: GO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Mitochondrial complex that possesses alpha-ketoglutarate dehydrogenase activity.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate dehydrogenase complex (obsolete GO:0005947)","synonyms":[{"name":"2-oxoglutarate dehydrogenase complex","type":"broad"}],"termid":"GO:0005947"}


id: GO:1904819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","PMID:15840053","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parietal peritoneum development","synonyms":[{"name":"peritoneal cavity lining development","type":"exact"}],"termid":"GO:1904819"}


id: PBO:0040797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member a15","termid":"PBO:0040797"}


id: GO:0010555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannitol stimulus.","definition_xrefs":["PMID:17999646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannitol","synonyms":[{"name":"response to mannitol stimulus","type":"exact"}],"termid":"GO:0010555"}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: GO:0050984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sulfation of peptidyl-serine to form peptidyl-O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein sulfation","termid":"GO:0006477"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine sulfation","termid":"GO:0050984"}


id: PBO:0053340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 208","termid":"PBO:0053340"}


id: PBO:0055869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 1","termid":"PBO:0055869"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: PBO:0074851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38D","termid":"PBO:0074851"}


id: GO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"negative regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of GABA reuptake","type":"exact"},{"name":"negative regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"}],"termid":"GO:0051949"}


id: PBO:0041574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 58","termid":"PBO:0041574"}


id: PBO:0082596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class I histone deacetylase (HDAC) family member; deacetylates Smc3p on lysine residues at anaphase onset; has sequence similarity to Hda1p, Rpd3p, Hos2p, and Hos3p; interacts with the Tup1p-Ssn6p corepressor complex","termid":"PBO:0082596"}


id: GO:0070884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the calcineurin-NFAT signaling cascade.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcineurin-mediated signaling","termid":"GO:0106056"},{"relation_name":"regulates","term_name":"calcineurin-NFAT signaling cascade","termid":"GO:0033173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcineurin-NFAT signaling cascade","secondary_identifiers":["GO:0051531","GO:0051532"],"synonyms":[{"name":"NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of NFAT protein import into nucleus","type":"narrow"},{"name":"regulation of calcineurin-NFAT signaling pathway","type":"related"},{"name":"regulation of calcineurin-NFAT signalling cascade","type":"exact"}],"termid":"GO:0070884"}


id: PATO:0001172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity quality inhering in a bearer by virtue of the bearer's inability to recover its size and shape after deformation in any way.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elasticity","termid":"PATO:0001031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inelastic","termid":"PATO:0001172"}


id: GO:0035655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-18 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-18","termid":"GO:0071351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-18-mediated signaling pathway","synonyms":[{"name":"interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:0035655"}


id: GO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to and maintained in the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"posterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"posterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060814"}


id: PBO:0073290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 12","termid":"PBO:0073290"}


id: PBO:0057858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3169","termid":"PBO:0057858"}


id: PBO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 3","termid":"PBO:0060683"}


id: PBO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 51","termid":"PBO:0072365"}


id: PBO:0090064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine/spermine/histone N1-acetyltransferase","termid":"PBO:0090064"}


id: PBO:0070036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1333, pseudogene","termid":"PBO:0070036"}


id: GO:0160090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a guanosine in mRNA + S-adenosyl-L-methionine = an N(7)-methylguanosine in mRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:31031084","PMID:37379838","RHEA:60508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"internal mRNA (guanine-N7-)-methyltransferase activity","termid":"GO:0160090"}


id: PBO:0001437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof14","termid":"PBO:0001437"}


id: PBO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BH member 1 pseudogene","termid":"PBO:0062242"}


id: PR:Q09770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphoacetylglucosamine mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.01c","secondary_identifiers":["UniProtKB:Q09770"],"synonyms":[{"name":"N-acetylglucosamine-phosphate mutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PGM3","type":"exact"},{"name":"acetylglucosamine phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09770"}


id: PR:O94424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10445:SF0","PRO:DNx","OMA:SCHPO02358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.13c","secondary_identifiers":["UniProtKB:O94424"],"synonyms":[{"name":"ATP-dependent helicase TFG2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2F2","type":"exact"},{"name":"TFIIF medium subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94424"}


id: PBO:0059630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 2","termid":"PBO:0059630"}


id: PBO:0065352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 2","termid":"PBO:0065352"}


id: GO:0070868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin and contributes to chromatin silencing.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterochromatin organization involved in chromatin silencing (obsolete GO:0070868)","synonyms":[{"name":"heterochromatin organisation involved in chromatin silencing","type":"exact"}],"termid":"GO:0070868"}


id: MOD:01511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-117 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01511"}


id: SO:1000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet changes the stop codon, causing an elongated transcript sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000063 sequence_variant_causing_terminator_codon_change_in_transcript (obsolete SO:1000063)","synonyms":[{"name":"mutation causing terminator codon change in transcript","type":"related"},{"name":"sequence variant causing terminator codon change in transcript","type":"exact"}],"termid":"SO:1000063"}


id: PBO:0050413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 2","termid":"PBO:0050413"}


id: PBO:0080803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA pseudogene 1","termid":"PBO:0080803"}


id: PBO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54","termid":"PBO:0039561"}


id: PBO:0043655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit zeta 1","termid":"PBO:0043655"}


id: PBO:0017787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase Rki1 (predicted)","termid":"PBO:0017787"}


id: GO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the carbon 5 (C5) residue to form peptidyl-5-methyl-L-arginine.","definition_xrefs":["RESID:AA0272","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine C5-methylation (obsolete GO:0018181)","synonyms":[{"name":"peptidyl-arginine 5-methylation","type":"exact"}],"termid":"GO:0018181"}


id: PBO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bipolar_mitotic_spindle","termid":"PBO:0030094"}


id: PBO:0110042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of DNA class I crossover intermediates 1","termid":"PBO:0110042"}


id: GO:0018233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-cysteine to form a 2'-(S-L-cysteinyl)-L-histidine protein cross-link.","definition_xrefs":["RESID:AA0109"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2'-(S-L-cysteinyl)-L-histidine (obsolete GO:0018233)","termid":"GO:0018233"}


id: GO:0072721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic substance","termid":"GO:0071310"},{"relation_name":"is_a","term_name":"response to dithiothreitol","termid":"GO:0072720"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dithiothreitol","synonyms":[{"name":"cellular response to 1,4-dithiothreitol","type":"exact"},{"name":"cellular response to DTT","type":"exact"}],"termid":"GO:0072721"}


id: GO:0052051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type II secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type II secretion system (obsolete GO:0052051)","termid":"GO:0052051"}


id: GO:0043153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synchronization of a circadian rhythm to photoperiod, the intermittent cycle of light (day) and dark (night).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"},{"relation_name":"is_a","term_name":"entrainment of circadian clock","termid":"GO:0009649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entrainment of circadian clock by photoperiod","synonyms":[{"name":"photoentrainment of circadian clock","type":"exact"}],"termid":"GO:0043153"}


id: GO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized hemopoietic precursor cell acquires the specialized features of a plasmacytoid dendritic cell.","definition_xrefs":["GOC:add","PMID:16174108","PMID:15990333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoid dendritic cell activation","termid":"GO:0002270"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell differentiation","termid":"GO:0002273"}


id: PBO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 7","termid":"PBO:0042981"}


id: SO:0000309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000309 computed_feature (obsolete SO:0000309)","termid":"SO:0000309"}


id: PBO:0073525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing 19","termid":"PBO:0073525"}


id: FYPO:0004328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization during mitosis","synonyms":[{"name":"normal cellular protein localization during mitosis","type":"exact"},{"name":"normal protein localisation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic M phase","type":"related"},{"name":"normal protein localization during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004328"}


id: GO:0106093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.","definition_xrefs":["PMID:11574472","GOC:bhm","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"EDS1 disease-resistance complex","synonyms":[{"name":"EDS1-PAD4 complex","type":"narrow"},{"name":"EDS1-PAD4-SAG101 complex","type":"narrow"},{"name":"EDS1-SAG101 complex","type":"narrow"}],"termid":"GO:0106093"}


id: GO:0098973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic actin cytoskeleton","termid":"GO:0098973"}


id: PBO:0064379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 1","termid":"PBO:0064379"}


id: GO:0098992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.","definition_xrefs":["GOC:dos","Wikipedia:Neuropeptide&oldid=713905176","ISBN:978-0-07-181001-2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"neuronal dense core vesicle","termid":"GO:0098992"}


id: GO:0015217
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ADP, adenosine diphosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ADP transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015217","terms_by_termid":{"GO:0005471":null}}


id: PR:Q10327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC32A11.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C32A11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.02c","synonyms":[{"name":"Spom972h-SPAC32A11.02c","type":"exact"}],"termid":"PR:Q10327"}


id: PBO:0110350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 2","termid":"PBO:0110350"}


id: PBO:0042702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF2 antisense RNA 2","termid":"PBO:0042702"}


id: GO:1901637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of presynaptic active zone structure (obsolete GO:1901637)","synonyms":[{"name":"activation of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"positive regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"upregulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901637"}


id: PBO:0066635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 3","termid":"PBO:0066635"}


id: PR:O74431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cation-transporting ATPase 13A3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase C1672.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.11c","secondary_identifiers":["UniProtKB:O74431"],"synonyms":[{"name":"Spom972h-ATP13A3","type":"exact"}],"termid":"PR:O74431"}


id: PBO:0109297
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization decreases protein concentration","termid":"PBO:0109297"}


id: GO:0080084
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a 5S rDNA sequence, encoding ribosomal 5S rRNA, which is individually transcribed by RNA polymerase III, rather than by RNA polymerase I, in species where it exists.","definition_xrefs":["PMID:12711688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA binding","termid":"GO:0000182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"5S rDNA binding","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0080084","terms_by_termid":{"GO:0001002":null}}


id: PBO:0063346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pericentrin","termid":"PBO:0063346"}


id: GO:0004115
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77736],"is_not":false,"summary":null,"term":"GO:0004115"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic AMP + H2O = AMP + H+.","definition_xrefs":["GOC:ai","RHEA:25277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3',5'-cyclic-AMP phosphodiesterase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9629675","MetaCyc:RXN0-5038","Reactome:R-HSA-418553","Reactome:R-HSA-9644869","EC:3.1.4.53","Reactome:R-HSA-111962","Reactome:R-HSA-9705507","Reactome:R-HSA-9708261"],"synonyms":[{"name":"3',5' cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-AMP-specific phosphodiesterase activity","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-specific phosphodiesterase activity","type":"exact"},{"name":"cAMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic AMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0004115","terms_by_termid":{"GO:0004115":null}}


id: PBO:0109278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3113","termid":"PBO:0109278"}


id: PATO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001106 relative strain value (obsolete PATO:0001106)","termid":"PATO:0001106"}


id: GO:0045753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"regulation of acetate catabolic process","termid":"GO:0045734"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of acetate catabolic process","synonyms":[{"name":"down regulation of acetate catabolic process","type":"exact"},{"name":"down-regulation of acetate catabolic process","type":"exact"},{"name":"downregulation of acetate catabolic process","type":"exact"},{"name":"inhibition of acetate catabolic process","type":"narrow"},{"name":"negative regulation of acetate breakdown","type":"exact"},{"name":"negative regulation of acetate catabolism","type":"exact"},{"name":"negative regulation of acetate degradation","type":"exact"}],"termid":"GO:0045753"}


id: GO:0030590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs during the first cell cycle in an embryo, in which anterior cortical contractions culminate in a single partial constriction of the embryo called the pseudocleavage furrow. An example of this process is found in nematode worms.","definition_xrefs":["PMID:7729583","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudocleavage","termid":"GO:0030588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"first cell cycle pseudocleavage","termid":"GO:0030590"}


id: PBO:0057227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 382","termid":"PBO:0057227"}


id: PBO:0049329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 1","termid":"PBO:0049329"}


id: PBO:0064562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 and ZP3 fusion","termid":"PBO:0064562"}


id: PBO:0083737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity","termid":"PBO:0083737"}


id: GO:0001046
data:
  {"annotated_genes":["SJAG_00692","SJAG_02813","SJAG_00421","SJAG_00958","SJAG_00698"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71340],"is_not":false,"summary":null,"term":"GO:0001046"},{"annotations":[104450,75120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001164"},{"annotations":[91140,107118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000979"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of DNA that is part of a core promoter region. The core promoter is composed of the transcription start site and binding sites for the RNA polymerase and the basal transcription machinery. The transcribed region might be described as a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription cis-regulatory region binding","termid":"GO:0000976"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00692":null,"SJAG_00698":null,"SJAG_00958":null,"SJAG_02813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"core promoter sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0000985","GO:0001047"],"synonyms":[{"name":"bacterial-type RNA polymerase core promoter sequence-specific DNA binding","type":"narrow"},{"name":"core promoter binding","type":"related"},{"name":"eubacterial-type RNA polymerase core promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001046","terms_by_termid":{"GO:0000979":null,"GO:0001046":null,"GO:0001164":null}}


id: PBO:0058343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4716","termid":"PBO:0058343"}


id: PBO:0089818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MBF transcription factor complex subunit Cdc10","termid":"PBO:0089818"}


id: PR:G2TRU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.17","synonyms":[{"name":"Spom972h-wtf15","type":"exact"}],"termid":"PR:G2TRU7"}


id: PBO:0069226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 481, pseudogene","termid":"PBO:0069226"}


id: PBO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 9","termid":"PBO:0071781"}


id: FYPO:0003700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of snoRNA primary transcripts measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased snoRNA primary transcript level","synonyms":[{"name":"increased small nucleolar RNA primary transcript level","type":"exact"},{"name":"increased snoRNA primary transcript accumulation","type":"related"},{"name":"increased snoRNA primary transcript level during mitotic cell cycle","type":"related"},{"name":"increased snoRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased snoRNA transcript level","type":"broad"}],"termid":"FYPO:0003700"}


id: PBO:0013051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fhl1","termid":"PBO:0013051"}


id: PBO:0060223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5","termid":"PBO:0060223"}


id: PBO:0088712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk32","termid":"PBO:0088712"}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["GOC:rph","PMID:26586433","GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: MOD:01484
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-glutamic acid residue and an L-lysine residue by an isopeptide bond to form N6-(L-isoglutamyl)-L-lysine and the release of water.","definition_xrefs":["PubMed:19015515","RESID:AA0124#GLU","ChEBI:21863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-(L-isoglutamyl)-L-lysine","termid":"MOD:01630"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoglutamyl)-L-lysine (Glu)","synonyms":[{"name":"(2S)-2-amino-6-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"2-azanyl-6-([4-azanyl-4-carboxybutanoyl]azanyl)hexanoic acid","type":"exact"},{"name":"5-glutamyl N6-lysine","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-lysine","type":"exact"},{"name":"N(epsilon)-(gamma-glutamyl)lysine","type":"exact"},{"name":"N6-(L-isoglutamyl)-L-lysine","type":"exact"}],"termid":"MOD:01484"}


id: GO:0040040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior that is dependent upon the sensation of temperature.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermosensory behavior","synonyms":[{"name":"behavioral response to temperature stimulus","type":"exact"},{"name":"behavioural response to temperature stimulus","type":"exact"},{"name":"thermosensory behaviour","type":"exact"}],"termid":"GO:0040040"}


id: PBO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(13)(q21.2)","termid":"PBO:0047939"}


id: GO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye development","termid":"GO:0043010"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye development","synonyms":[{"name":"embryonic eye development","type":"exact"}],"termid":"GO:0031076"}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: PBO:0043021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1A","termid":"PBO:0043021"}


id: PBO:0086648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086648"}


id: PBO:0055412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2842","termid":"PBO:0055412"}


id: PBO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4","termid":"PBO:0060735"}


id: PBO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNM3 intronic transcript 1","termid":"PBO:0045302"}


id: GO:0035037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An endocytosis process that results in penetration of the egg shell through the micropyle (a specialized anterior opening in the vitelline envelope) and entry of the entire sperm, including the surrounding plasma membrane and the sperm tail, into the egg cytoplasm. This step in fertilization is seen in Drosophila, where a plasma membrane fusion event between the sperm and the egg does not occur.","definition_xrefs":["PMID:9630751","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"sperm entry","termid":"GO:0035037"}


id: PBO:0044943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrodiol dehydrogenase","termid":"PBO:0044943"}


id: FYPO:0007509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PMID:17434129","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0007509"}


id: GO:0003027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by the action of chemoreceptors found in the carotid bodies and their resultant modulation of the vasomotor center. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","synonyms":[{"name":"carotid body chemoreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"carotid body chemoreceptor response to lowering of systemic arterial blood pressure","type":"exact"},{"name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signalling","type":"exact"},{"name":"vagal reflex","type":"broad"}],"termid":"GO:0003027"}


id: GO:1904479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GOC:rl","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:12469120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"negatively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal absorption","synonyms":[{"name":"down regulation of intestinal absorption","type":"exact"},{"name":"down-regulation of intestinal absorption","type":"exact"},{"name":"downregulation of intestinal absorption","type":"exact"},{"name":"inhibition of intestinal absorption","type":"narrow"}],"termid":"GO:1904479"}


id: PBO:0054640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2045","termid":"PBO:0054640"}


id: FYPO:0002705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methionine. Cells stop growing (and may die) at a concentration of methionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to methionine","synonyms":[{"name":"hypersensitive to methionine","type":"exact"},{"name":"methionine inhibited","type":"exact"},{"name":"sensitive to methionine during mitotic cell cycle","type":"related"},{"name":"sensitive to methionine during vegetative growth","type":"exact"}],"termid":"FYPO:0002705"}


id: GO:1905834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["PMID:22065602","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}


id: MOD:01071
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a diphenylmethyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphenylmethyl modified residue","synonyms":[{"name":"Dpm","type":"exact"}],"termid":"MOD:01071"}


id: GO:0045343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MHC class I biosynthetic process","synonyms":[{"name":"regulation of MHC class I anabolism","type":"exact"},{"name":"regulation of MHC class I biosynthesis","type":"exact"},{"name":"regulation of MHC class I formation","type":"exact"},{"name":"regulation of MHC class I synthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045343"}


id: PR:O59801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ski2 gene.","definition_xrefs":["UniProtKB:O59801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase C550.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.03c","synonyms":[{"name":"Spom972h-ski2","type":"exact"}],"termid":"PR:O59801"}


id: PBO:0082357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in meiosis I, and kinetochore release from SPB clusters at meiotic exit; helps maintain condensed chromosomes during anaphase; required for SPB cohesion and prevention of multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; required for inhibition of karyopherin Pse1p upon SAC arrest","termid":"PBO:0082357"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: SO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-acetylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_acetylcytidine","secondary_identifiers":["RNAMOD:024"],"synonyms":[{"name":"N4 acetylcytidine","type":"exact"},{"name":"N4-acetylcytidine","type":"exact"},{"name":"ac4C","type":"exact"}],"termid":"SO:0001285"}


id: PBO:0052313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0825","termid":"PBO:0052313"}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: MOD:01227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to an L-fluorophenylalanine.","definition_xrefs":["DeltaMass:181","OMSSA:46","PubMed:8069568","Unimod:127#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"},{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated L-phenylalanine","synonyms":[{"name":"Fluoro","type":"related"},{"name":"fluorophenylalanine replacement of phenylalanine","type":"related"},{"name":"phef","type":"exact"}],"termid":"MOD:01227"}


id: MOD:01652
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a sulfonyl halide compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}


id: PR:O14154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mde5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase mde5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.09","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mde5","type":"exact"},{"name":"mei4-dependent protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 30 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14154"}


id: PR:P0CT64
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.14","synonyms":[{"name":"Spom972h-rps1601","type":"exact"}],"termid":"PR:P0CT64"}


id: PBO:0058590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-1","termid":"PBO:0058590"}


id: PATO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000580 absolute weight value (obsolete PATO:0000580)","termid":"PATO:0000580"}


id: PBO:0017023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR33","termid":"PBO:0017023"}


id: GO:0006097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"glyoxylate metabolic process","termid":"GO:0046487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glyoxylate cycle","secondary_identifiers":["MetaCyc:GLYOXYLATE-BYPASS","Wikipedia:Glyoxylate_cycle"],"synonyms":[{"name":"glyoxylate bypass","type":"exact"}],"termid":"GO:0006097"}


id: FYPO:0007217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PMID:31260531","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007217"}


id: GO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units.","definition_xrefs":["EC:3.2.1.65","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"levanase activity","secondary_identifiers":["MetaCyc:3.2.1.65-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan fructanohydrolase activity","type":"related"},{"name":"levan hydrolase activity","type":"exact"}],"termid":"GO:0031219"}


id: PR:Q9HDZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PGAP2-interacting protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01302","PANTHER:PTHR14859:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cwh43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.12","secondary_identifiers":["UniProtKB:Q9HDZ2"],"synonyms":[{"name":"Spom972h-CWH43","type":"exact"}],"termid":"PR:Q9HDZ2"}


id: FYPO:0006203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular dATP level","synonyms":[{"name":"decreased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dATP level during vegetative growth","type":"exact"},{"name":"reduced cellular dATP level","type":"exact"}],"termid":"FYPO:0006203"}


id: PBO:0070611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 79","termid":"PBO:0070611"}


id: PBO:0054069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1416","termid":"PBO:0054069"}


id: GO:0090234
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111784,97803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centromere complex assembly","termid":"GO:0090230"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901719"],"synonyms":[{"name":"regulation of NMS complex assembly","type":"narrow"},{"name":"regulation of chromosome-kinetochore attachment","type":"narrow"}],"termid":"GO:0090234","terms_by_termid":{"GO:1905561":null}}


id: SO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7 nucleotide recombination site (e.g. CACAGTG), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"heptamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000561"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_heptamer","synonyms":[{"name":"V heptamer","type":"exact"},{"name":"V-HEPTAMER","type":"exact"}],"termid":"SO:0000533"}


id: PBO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF300 family protein","termid":"PBO:0000779"}


id: PBO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase (predicted)","termid":"PBO:0003474"}


id: GO:0048567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ectodermal digestive tract are generated and organized. The ectodermal digestive tract includes those portions of the digestive tract that are derived from ectoderm.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal digestive tract development","termid":"GO:0007439"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal digestive tract morphogenesis","synonyms":[{"name":"ectodermal gut morphogenesis","type":"related"}],"termid":"GO:0048567"}


id: PBO:0005314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim23 (predicted)","termid":"PBO:0005314"}


id: GO:0006575
data:
  {"annotated_genes":["SJAG_04577","SJAG_01351","SJAG_04858","SJAG_02225","SJAG_01139","SJAG_03914","SJAG_00988","SJAG_01162","SJAG_03856","SJAG_05200","SJAG_00043","SJAG_04481","SJAG_04425","SJAG_01466","SJAG_00832","SJAG_02599","SJAG_00529","SJAG_00106","SJAG_02100","SJAG_04726","SJAG_02408","SJAG_03076","SJAG_03712","SJAG_00815","SJAG_03679","SJAG_01766","SJAG_03224","SJAG_03494","SJAG_01198","SJAG_00903","SJAG_01995","SJAG_05181","SJAG_01612","SJAG_04156","SJAG_03316","SJAG_01233","SJAG_03275","SJAG_03632","SJAG_01126","SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103658,107625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[112145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[70839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[68786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[71128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[61741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140479"},{"annotations":[106773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[101438,107626,103659,100164,108866,100305,85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[73136,71130,72146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[72456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009396"},{"annotations":[76449,77545,103744,92552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[75769,97686,94698,93882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006751"},{"annotations":[98211,94768,76085,77826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006749"},{"annotations":[99026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903253"},{"annotations":[99027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903255"},{"annotations":[99028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052707"},{"annotations":[108563,72266,76505,84621,98170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[109836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[89518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[96871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"},{"annotations":[75594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033528"},{"annotations":[99029,106774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"},{"annotations":[108868,71129,85993,101439,78377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[75050,75702,72457,86944,100167,71001,90071,71803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"},{"annotations":[72178,88541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic 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metabolism","type":"exact"}],"termid":"GO:0006575","terms_by_termid":{"GO:0000053":null,"GO:0006658":null,"GO:0006659":null,"GO:0006660":null,"GO:0006749":null,"GO:0006750":null,"GO:0006751":null,"GO:0006761":null,"GO:0009257":null,"GO:0009396":null,"GO:0015940":null,"GO:0033528":null,"GO:0035999":null,"GO:0046452":null,"GO:0046654":null,"GO:0046655":null,"GO:0046656":null,"GO:0046901":null,"GO:0052699":null,"GO:0052707":null,"GO:0140479":null,"GO:1903253":null,"GO:1903255":null,"GO:1903257":null,"GO:1990181":null}}


id: GO:0070425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"negatively_regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"negative regulation of NOD signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"negative regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070425"}


id: PBO:0080604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 38","termid":"PBO:0080604"}


id: PR:O74416
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome maturation protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12828:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor ump1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.03c","secondary_identifiers":["UniProtKB:O74416"],"synonyms":[{"name":"SPCC14G10.03c","type":"related"},{"name":"Spom972h-POMP","type":"exact"}],"termid":"PR:O74416"}


id: GO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:aruk","GOC:mah","GOC:bc","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction organization","termid":"GO:0045216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction organization","synonyms":[{"name":"adherens junction organisation","type":"exact"}],"termid":"GO:0034332"}


id: PBO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 134","termid":"PBO:0075084"}


id: GO:0050280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-5-O-methyl-myo-inositol + NAD+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADH.","definition_xrefs":["RHEA:11300","EC:1.1.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sequoyitol dehydrogenase activity","secondary_identifiers":["MetaCyc:SEQUOYITOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03497"],"synonyms":[{"name":"5-O-methyl-myo-inositol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050280"}


id: PBO:0056542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L antisense RNA 1","termid":"PBO:0056542"}


id: FYPO:0004596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of the initiation of DNA-dependent DNA replication is abnormal, with replication reinitiating during G2 phase of the mitotic cell cycle and resulting in one or more rounds of rereplication of the entire genome.","definition_xrefs":["PMID:11532929","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase resulting in complete rereplication","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation during G2 phase resulting in complete rereplication during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase during vegetative growth, resulting in complete rereplication","type":"exact"},{"name":"abnormal negative regulation of DNA replication initiation during mitotic G2 phase resulting in complete re-replication","type":"exact"},{"name":"abnormal negative regulation of DNA-dependent DNA replication initiation during mitotic G2 phase resulting in complete rereplication","type":"exact"}],"termid":"FYPO:0004596"}


id: PBO:0087381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol-binding protein that localizes to puncta in the cortical ER; sterol binding occurs via two StART-like domains; one of six StART-like domain-containing proteins in yeast that may be involved in intracellular sterol transfer between membranes; conserved across eukaryotes; has both GRAM and StART-like (VASt) domains; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087381"}


id: GO:1905582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannose stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mannose","termid":"GO:1905582"}


id: PBO:0080354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 9, pseudogene","termid":"PBO:0080354"}


id: PBO:0076499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 2","termid":"PBO:0076499"}


id: GO:0050213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-alpha-pregnan-3,20-dione + NADP+ = progesterone + NADPH.","definition_xrefs":["MetaCyc:PROGESTERONE-5-ALPHA-REDUCTASE-RXN","EC:1.3.1.30"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5-alpha-reductase activity (obsolete GO:0050213)","synonyms":[{"name":"5alpha-pregnan-3,20-dione:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"delta4-steroid 5alpha-reductase (progesterone)","type":"related"},{"name":"progesterone 5a-reductase activity","type":"exact"},{"name":"progesterone 5alpha-reductase activity","type":"related"},{"name":"steroid 5-alpha-reductase activity","type":"broad"}],"termid":"GO:0050213"}


id: PBO:0048163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 8","termid":"PBO:0048163"}


id: GO:0046771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the nucleocapsid evaginates from the host inner nuclear membrane system into the perinuclear space, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from inner nuclear membrane","synonyms":[{"name":"inner nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046771"}


id: PBO:0074870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 53B","termid":"PBO:0074870"}


id: GO:0050506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.","definition_xrefs":["RHEA:19385","EC:2.4.1.219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"vomilenine glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05882","MetaCyc:2.4.1.219-RXN"],"synonyms":[{"name":"UDP-glucose:vomilenine 21-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:vomilenine 21beta-D-glucosyltransferase activity","type":"related"},{"name":"vomilenine-glucosyltransferase activity","type":"related"}],"termid":"GO:0050506"}


id: PBO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetin","termid":"PBO:0072547"}


id: PBO:0030955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030955"}


id: GO:0022832
data:
  {"annotated_genes":["SJAG_00048","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[71613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated channel activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0022832","terms_by_termid":{"GO:0008308":null,"GO:0008331":null}}


id: GO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-cysteine, (S)-2-amino-3-mercaptopropanoic acid, which occurs naturally in firefly luciferin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine metabolic process","termid":"GO:0006534"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-cysteine metabolic process","synonyms":[{"name":"D-cysteine metabolism","type":"exact"}],"termid":"GO:0046438"}


id: MOD:00475
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 2-amino-L-tyrosine.","definition_xrefs":["PubMed:9252331","Unimod:342#Y","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"aminated residue","termid":"MOD:02039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-L-tyrosine","synonyms":[{"name":"Amino","type":"related"},{"name":"Tyrosine oxidation to 2-aminotyrosine","type":"related"}],"termid":"MOD:00475"}


id: GO:0007032
data:
  {"annotated_genes":["SJAG_01448","SJAG_01571","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75636,98077],"is_not":false,"summary":null,"term":"GO:0007032"},{"annotations":[73947],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034496"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of endosomes.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01448":null,"SJAG_01571":null,"SJAG_02100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"endosome organisation","type":"exact"},{"name":"endosome organization and biogenesis","type":"related"}],"termid":"GO:0007032","terms_by_termid":{"GO:0007032":null,"GO:0034496":null}}


id: GO:1901426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a furfural stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to furfural","termid":"GO:1901426"}


id: GO:0072393
data:
  {"annotated_genes":["SJAG_03062","SJAG_01613","SJAG_01546","SJAG_03835","SJAG_03116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[92312,73611,98455,94720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a microtubule organizing center.","definition_xrefs":["GOC:BHF","PMID:19825938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring","termid":"GO:0034453"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"microtubule anchoring at microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"microtubule anchoring at MTOC","type":"exact"},{"name":"microtubule anchoring at microtubule organising centre","type":"exact"}],"termid":"GO:0072393","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rogdi atypical leucine zipper","termid":"PBO:0070383"}


id: PBO:0084695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial elongation factor involved in translational elongation","termid":"PBO:0084695"}


id: GO:0106240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:O2 + peregrinol + reduced [NADPH--hemoprotein reductase] = H+ + H2O + labd-13Z-ene-9,15,16-triol + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:eab","PMID:29315936","RHEA:62192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"labd-13Z-ene-9,15,16-triol synthase activity","termid":"GO:0106240"}


id: GO:1902547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to vascular endothelial growth factor stimulus.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:17895370","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"regulates","term_name":"cellular response to vascular endothelial growth factor stimulus","termid":"GO:0035924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to vascular endothelial growth factor stimulus","synonyms":[{"name":"regulation of cellular response to VEGF","type":"exact"},{"name":"regulation of cellular response to VEGFA","type":"narrow"},{"name":"regulation of cellular response to VEGFB","type":"narrow"},{"name":"regulation of cellular response to vascular endothelial growth factor","type":"exact"}],"termid":"GO:1902547"}


id: PBO:0003290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transporter (predicted)","termid":"PBO:0003290"}


id: PBO:0109321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20/Hsp15.8","termid":"PBO:0109321"}


id: PBO:0073423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 1","termid":"PBO:0073423"}


id: PBO:0057890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3194","termid":"PBO:0057890"}


id: PBO:0041214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 2","termid":"PBO:0041214"}


id: GO:1900448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900448)","termid":"GO:1900448"}


id: PBO:0058918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-1","termid":"PBO:0058918"}


id: GO:0120073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120073"}


id: GO:0046563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + methanol = H2O2 + formaldehyde.","definition_xrefs":["MetaCyc:METHANOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"methanol oxidase activity","secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0046563"}


id: PBO:0041485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 98","termid":"PBO:0041485"}


id: PBO:0009381
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position","termid":"PBO:0009381"}


id: GO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: haloacetate + H2O = glycolate + halide.","definition_xrefs":["EC:3.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"haloacetate dehalogenase activity","secondary_identifiers":["RHEA:11044","MetaCyc:HALOACETATE-DEHALOGENASE-RXN","UM-BBD_enzymeID:e0006"],"synonyms":[{"name":"haloacetate halidohydrolase activity","type":"related"},{"name":"monohaloacetate dehalogenase activity","type":"related"}],"termid":"GO:0018785"}


id: PBO:0060332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IIIB","termid":"PBO:0060332"}


id: FYPO:0001003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during nitrogen starvation","synonyms":[{"name":"fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"small vacuoles present in greater numbers during nitrogen starvation","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen depletion","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen deprivation","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001003"}


id: MOD:00200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to D-methionine.","definition_xrefs":["RESID:AA0193","PubMed:16033333","ChEBI:29984","PubMed:2542051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-methionine","synonyms":[{"name":"(2R)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"D-Met","type":"exact"},{"name":"D-methionine","type":"exact"},{"name":"MOD_RES D-methionine","type":"exact"}],"termid":"MOD:00200"}


id: PBO:0048607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIHCG inhibitor of miR-200b/200a/429 expression","termid":"PBO:0048607"}


id: PBO:0083075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dioxygenase that catalyzes alpha-oxygenation of 2-hydroxy fatty acids; involved in metabolism of phytosphingosine; not an essential gene","termid":"PBO:0083075"}


id: GO:0032118
data:
  {"annotated_genes":["SJAG_00368","SJAG_03073","SJAG_04143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101941,106462],"is_not":false,"summary":null,"term":"GO:0032118"},{"annotations":[96891],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903563"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the horsetail-astral array, a structure of astral microtubules that emanates from the spindle pole body during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"dynein-driven meiotic oscillatory nuclear movement","termid":"GO:0030989"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03073":null,"SJAG_04143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0140013","GO:0006810","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail-astral microtubule array organization","type":"exact"},{"name":"horsetail-astral microtubule organisation","type":"exact"},{"name":"horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0032118","terms_by_termid":{"GO:0032118":null,"GO:1903563":null}}


id: PBO:0031708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_mitotic_cell_cycle_progression","termid":"PBO:0031708"}


id: PBO:0064351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin C1","termid":"PBO:0064351"}


id: GO:0051338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transferase activity","synonyms":[{"name":"transferase regulator","type":"exact"}],"termid":"GO:0051338"}


id: PBO:0066102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS and EF-hand domain containing","termid":"PBO:0066102"}


id: PBO:0047892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(q21)","termid":"PBO:0047892"}


id: GO:0016447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via germline recombination within a single locus","termid":"GO:0002562"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin gene segments","synonyms":[{"name":"somatic recombination of antibody gene segments","type":"exact"}],"termid":"GO:0016447"}


id: PR:Q9URZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC732.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URZ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphatase C732.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC732.02c","synonyms":[{"name":"Spom972h-SPAC732.02c","type":"exact"}],"termid":"PR:Q9URZ7"}


id: GO:0005187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete storage protein (obsolete GO:0005187)","synonyms":[{"name":"storage protein","type":"exact"}],"termid":"GO:0005187"}


id: PBO:0004946
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.23","termid":"PBO:0004946"}


id: PBO:0048452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine C-acetyltransferase pseudogene 1","termid":"PBO:0048452"}


id: GO:0006730
data:
  {"annotated_genes":["SJAG_01616","SJAG_01466","SJAG_06611","SJAG_01126","SJAG_03224","SJAG_03914","SJAG_00106","SJAG_04156","SJAG_03712","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100133,108691],"is_not":false,"summary":null,"term":"GO:0006730"},{"annotations":[71803,100167,75702,86944,75050,71001,90071,72457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.","definition_xrefs":["GOC:pde","GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_01126":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_03224":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"one-carbon metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0019754","UM-BBD_pathwayID:C1cyc","GO:0019753"],"synonyms":[{"name":"one carbon metabolic process","type":"exact"},{"name":"one carbon metabolism","type":"exact"},{"name":"one-carbon metabolism","type":"exact"},{"name":"one-carbon transfer metabolic process","type":"exact"},{"name":"one-carbon transfer metabolism","type":"exact"}],"termid":"GO:0006730","terms_by_termid":{"GO:0006730":null,"GO:0035999":null}}


id: PBO:0045967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eosinophil granule ontogeny transcript","termid":"PBO:0045967"}


id: PBO:0060457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family apoptosis inhibitory protein","termid":"PBO:0060457"}


id: PBO:0073754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 9","termid":"PBO:0073754"}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: PBO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1","termid":"PBO:0044319"}


id: PR:O94653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BMS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12858:SF2","OMA:SCHPO02379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein bms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.06","secondary_identifiers":["UniProtKB:O94653"],"synonyms":[{"name":"Spom972h-BMS1","type":"exact"}],"termid":"PR:O94653"}


id: GO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving cyclic nucleotides.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclic nucleotide metabolic process (obsolete GO:0030800)","synonyms":[{"name":"down regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"down-regulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"downregulation of cyclic nucleotide metabolic process","type":"exact"},{"name":"inhibition of cyclic nucleotide metabolic process","type":"narrow"},{"name":"negative regulation of cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0030800"}


id: PBO:0061034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar pre-rRNA processing protein NIP7","termid":"PBO:0061034"}


id: PBO:0038367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_component_activity","termid":"PBO:0038367"}


id: PR:Q9P3U9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-related modifier 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14986:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-related modifier 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.04","secondary_identifiers":["UniProtKB:Q9P3U9"],"synonyms":[{"name":"SPCC548.04","type":"related"},{"name":"Spom972h-URM1","type":"exact"}],"termid":"PR:Q9P3U9"}


id: PR:Q9P7D5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP4H10.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7D5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P4H10.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.14c","synonyms":[{"name":"Spom972h-SPBP4H10.14c","type":"exact"}],"termid":"PR:Q9P7D5"}


id: GO:0030050
data:
  {"annotated_genes":["SJAG_04001","SJAG_00938","SJAG_03703","SJAG_02431","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70280,71061,73920,75779,78179],"is_not":false,"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"Movement of a vesicle along an actin filament, mediated by motor proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle transport along actin filament","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0030050","terms_by_termid":{"GO:0030050":null}}


id: RO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a  process that regulates a transport process and the entity transported by that process.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_transport_of","termid":"RO:0002011"}


id: PBO:0005875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15S rRNA","termid":"PBO:0005875"}


id: PBO:0052841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-1","termid":"PBO:0052841"}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: PBO:0081431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285","termid":"PBO:0081431"}


id: GO:0090148
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848","SJAG_05261","SJAG_03464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97927,98181,90533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090149"},{"annotations":[95431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099050"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the separation of a single continuous membrane into two membranes.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null,"SJAG_03464":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane scission","type":"exact"}],"termid":"GO:0090148","terms_by_termid":{"GO:0090149":null,"GO:0099050":null}}


id: PBO:0043357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clarin 3","termid":"PBO:0043357"}


id: GO:0030229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a very-low-density lipoprotein particle and delivering the very-low-density lipoprotein into the cell via endocytosis.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"very-low-density lipoprotein particle receptor activity","secondary_identifiers":["Wikipedia:VLDL_receptor"],"synonyms":[{"name":"VLDL receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"related"},{"name":"very-low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:0030229"}


id: PBO:0089178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5","termid":"PBO:0089178"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: PBO:0026789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_heterothallic_h-_cells","termid":"PBO:0026789"}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74457],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["EC:5.4.99.5","RHEA:13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:CHORISMATEMUT-RXN","KEGG_REACTION:R01715"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: PBO:0026805
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiotic_DNA_double-strand_break_formation","termid":"PBO:0026805"}


id: GO:0031873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 proteinase activated receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteinase activated receptor binding","termid":"GO:0031871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 2 proteinase activated receptor binding","synonyms":[{"name":"type 2 proteinase activated receptor ligand","type":"narrow"}],"termid":"GO:0031873"}


id: PR:O94659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.01c","synonyms":[{"name":"Spom972h-nog1","type":"exact"}],"termid":"PR:O94659"}


id: PBO:0085892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in secretion of proteins that lack classical secretory signal sequences; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0085892"}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["MetaCyc:1.1.99.25-RXN","KEGG_REACTION:R01873","EC:1.1.5.8"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: PBO:0013752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1","termid":"PBO:0013752"}


id: PBO:0064018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 52","termid":"PBO:0064018"}


id: PBO:0027444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_VLP_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0027444"}


id: PBO:0084528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the lipid-translocating exporter (LTE) family; present in multiple copies associated with SUC telomeric loci, amplified in yeasts used for industrial biomass or ethanol production with molasses as substrate","termid":"PBO:0084528"}


id: GO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: rhamnose(out) + H+(out) = rhamnose(in) + H+(in).","definition_xrefs":["TC:2.A.7.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"},{"relation_name":"is_a","term_name":"rhamnose transmembrane transporter activity","termid":"GO:0015153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"rhamnose:proton symporter activity","synonyms":[{"name":"rhamnose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015561"}


id: GO:0032079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodeoxyribonuclease activity","synonyms":[{"name":"activation of endodeoxyribonuclease activity","type":"narrow"},{"name":"endodeoxyribonuclease activator","type":"related"},{"name":"stimulation of endodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of endodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0032079"}


id: PBO:0042542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8 pseudogene 1","termid":"PBO:0042542"}


id: PBO:0089298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","termid":"PBO:0089298"}


id: PBO:0068921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 164, pseudogene","termid":"PBO:0068921"}


id: PBO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.10","termid":"PBO:0002323"}


id: GO:1902842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of netrin-activated signaling pathway.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:24004945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of netrin-activated signaling pathway","termid":"GO:1902841"},{"relation_name":"negatively_regulates","term_name":"netrin-activated signaling pathway","termid":"GO:0038007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of netrin-activated signaling pathway","synonyms":[{"name":"down regulation of netrin signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"down-regulation of netrin signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"down-regulation of netrin-activated signaling pathway","type":"exact"},{"name":"down-regulation of netrin-activated signalling pathway","type":"exact"},{"name":"down-regulation of netrin-mediated signaling pathway","type":"exact"},{"name":"downregulation of netrin signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"downregulation of netrin-activated signaling pathway","type":"exact"},{"name":"downregulation of netrin-activated signalling pathway","type":"exact"},{"name":"downregulation of netrin-mediated signaling pathway","type":"exact"},{"name":"inhibition of netrin signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signal transduction pathway","type":"narrow"},{"name":"inhibition of netrin-activated signaling pathway","type":"narrow"},{"name":"inhibition of netrin-activated signalling pathway","type":"narrow"},{"name":"inhibition of netrin-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of netrin signaling pathway","type":"exact"},{"name":"negative regulation of netrin-activated signal transduction pathway","type":"exact"},{"name":"negative regulation of netrin-activated signalling pathway","type":"exact"},{"name":"negative regulation of netrin-mediated signaling pathway","type":"exact"}],"termid":"GO:1902842"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0045683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermis development","synonyms":[{"name":"down regulation of epidermis development","type":"exact"},{"name":"down-regulation of epidermis development","type":"exact"},{"name":"downregulation of epidermis development","type":"exact"},{"name":"inhibition of epidermis development","type":"narrow"},{"name":"negative regulation of epidermal development","type":"exact"},{"name":"negative regulation of hypodermis development","type":"related"}],"termid":"GO:0045683"}


id: GO:0015004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete small blue copper electron carrier (obsolete GO:0015004)","synonyms":[{"name":"small blue copper electron carrier","type":"exact"}],"termid":"GO:0015004"}


id: PBO:0048420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain containing 1","termid":"PBO:0048420"}


id: GO:0006170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dAMP, deoxyadenosine monophosphate (2'-deoxyadenosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dAMP metabolic process","termid":"GO:0046053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dAMP biosynthetic process","synonyms":[{"name":"dAMP anabolism","type":"exact"},{"name":"dAMP biosynthesis","type":"exact"},{"name":"dAMP formation","type":"exact"},{"name":"dAMP synthesis","type":"exact"}],"termid":"GO:0006170"}


id: GO:0022883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a zinc ion or zinc ions from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"},{"relation_name":"is_a","term_name":"monoatomic cation efflux transmembrane transporter activity","termid":"GO:0046583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"zinc efflux transmembrane transporter activity","synonyms":[{"name":"zinc efflux permease activity","type":"exact"}],"termid":"GO:0022883"}


id: PBO:0047923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(11)(q13.3)","termid":"PBO:0047923"}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: PBO:0040115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 2","termid":"PBO:0040115"}


id: PBO:0069820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1106, pseudogene","termid":"PBO:0069820"}


id: GO:0035115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic forelimb morphogenesis","secondary_identifiers":["GO:0035117"],"synonyms":[{"name":"embryonic arm morphogenesis","type":"narrow"}],"termid":"GO:0035115"}


id: GO:1905698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of polysome binding.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bc","GO_REF:0000059","PMID:18426977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of binding","termid":"GO:0051099"},{"relation_name":"is_a","term_name":"regulation of polysome binding","termid":"GO:1905696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of polysome binding","synonyms":[{"name":"activation of polyribosome binding","type":"narrow"},{"name":"activation of polysome binding","type":"narrow"},{"name":"positive regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polyribosome binding","type":"exact"},{"name":"up regulation of polysome binding","type":"exact"},{"name":"up-regulation of polyribosome binding","type":"exact"},{"name":"up-regulation of polysome binding","type":"exact"},{"name":"upregulation of polyribosome binding","type":"exact"},{"name":"upregulation of polysome binding","type":"exact"}],"termid":"GO:1905698"}


id: PR:Q10990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.19c","synonyms":[{"name":"Spom972h-cdt2","type":"exact"}],"termid":"PR:Q10990"}


id: PBO:0013084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, MrpL36/YmL36 (predicted)","termid":"PBO:0013084"}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: PBO:0088988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase Pmt1","termid":"PBO:0088988"}


id: PBO:0057918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3621","termid":"PBO:0057918"}


id: _global:inheres_in
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.","direct_ancestors":[{"relation_name":"is_a","term_name":"inheres_in_part_of","termid":"_global:inheres_in_part_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheres_in","secondary_identifiers":["RO:0000052"],"termid":"_global:inheres_in"}


id: PBO:0079413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 7","termid":"PBO:0079413"}


id: PBO:0049923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homogentisate 1,2-dioxygenase","termid":"PBO:0049923"}


id: GO:0106120
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a sterol biosynthetic process.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:16459310","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"positively_regulates","term_name":"sterol biosynthetic process","termid":"GO:0016126"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of sterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106120","terms_by_termid":{"GO:0070452":null}}


id: FYPO:0000035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize arginine, and therefore requires arginine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for arginine","synonyms":[{"name":"arginine auxotrophy","type":"exact"},{"name":"growth auxotrophic for arginine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for arginine during vegetative growth","type":"exact"}],"termid":"FYPO:0000035"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: PBO:0017700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein Spa2","termid":"PBO:0017700"}


id: GO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-oxygen bond. Enzymes with this activity are 'miscellaneous' carbon-oxygen lyases that cannot be grouped into one of the specific subclasses of the carbon-oxygen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-oxygen lyase activity (obsolete GO:0016839)","synonyms":[{"name":"other carbon-oxygen lyase activity","type":"exact"}],"termid":"GO:0016839"}


id: PBO:0058085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4302","termid":"PBO:0058085"}


id: PBO:0004537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase (predicted)","termid":"PBO:0004537"}


id: PBO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, involved in mitochondrial protein turnover (predicted)","termid":"PBO:0001069"}


id: GO:0071977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Bacterial-type flagellum-dependent cell motility that results in the smooth movement of a cell through a liquid medium.","definition_xrefs":["GOC:cilia","PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"},{"relation_name":"is_a","term_name":"cell swimming","termid":"GO:0071975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum-dependent swimming motility","synonyms":[{"name":"bacterial-type flagellar swimming motility","type":"related"},{"name":"bacterial-type flagellum-mediated cell swimming","type":"exact"}],"termid":"GO:0071977"}


id: PBO:0085721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric silencing; required for quiescent cell telomere hypercluster localization at nuclear membrane vicinity; interacts with PAD4-domain of Sir4p","termid":"PBO:0085721"}


id: GO:0047499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate. This reaction does not require Ca2+.","definition_xrefs":["EC:3.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase A2 activity","termid":"GO:0004623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"calcium-independent phospholipase A2 activity","secondary_identifiers":["Reactome:R-HSA-8952251"],"synonyms":[{"name":"calcium-independent cytosolic phospholipase A2 activity","type":"narrow"}],"termid":"GO:0047499"}


id: PBO:0052261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2B","termid":"PBO:0052261"}


id: GO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdate ion (MoO4 2-).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdate ion binding","synonyms":[{"name":"MoO4 ion binding","type":"exact"}],"termid":"GO:0030973"}


id: PBO:0027330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_transcription","termid":"PBO:0027330"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: GO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a hematopoietic stem cell population by cell division. A hematopoietic stem cell is a stem cell from which all cells of the lymphoid and myeloid lineages develop.","definition_xrefs":["GOC:rl","CL:0000037","GOC:BHF","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell proliferation","termid":"GO:0072089"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell proliferation","synonyms":[{"name":"hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:0071425"}


id: PBO:0062023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 4","termid":"PBO:0062023"}


id: GO:0006223
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87600],"is_not":false,"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates uracil, 2,4-dioxopyrimidine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase salvage","termid":"GO:0043100"},{"relation_name":"is_a","term_name":"uracil biosynthetic process","termid":"GO:0046107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"uracil salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006223","terms_by_termid":{"GO:0006223":null}}


id: PBO:0059575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2 pseudogene 1","termid":"PBO:0059575"}


id: GO:0042700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by luteinizing hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway","synonyms":[{"name":"luteinizing hormone signalling pathway","type":"exact"}],"termid":"GO:0042700"}


id: PBO:0041377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 54","termid":"PBO:0041377"}


id: PR:Q9Y7J8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy2 gene.","definition_xrefs":["UniProtKB:Q9Y7J8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C216.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.01c","synonyms":[{"name":"Spom972h-psy2","type":"exact"}],"termid":"PR:Q9Y7J8"}


id: PBO:0040117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 4","termid":"PBO:0040117"}


id: GO:0003267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A canonical Wnt signaling pathway that contributes to an increase in the frequency, or rate of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation (obsolete GO:0003267)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of secondary heart field cardioblast proliferation","type":"related"}],"termid":"GO:0003267"}


id: GO:0010705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs resulting in double strand break formation and repair through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0140013","GO:0008150","GO:0006310","GO:0006281"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in reciprocal meiotic recombination","termid":"GO:0010705"}


id: GO:0018852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate = 2,4-dichloro-cis,cis-muconate.","definition_xrefs":["EC:5.5.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"dichloromuconate cycloisomerase activity","secondary_identifiers":["MetaCyc:RXN-9856","RHEA:17437","UM-BBD_reactionID:r0277"],"synonyms":[{"name":"2,4-dichloro-2,5-dihydro-5-oxofuran-2-acetate lyase (decyclizing)","type":"related"}],"termid":"GO:0018852"}


id: PBO:0047400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO38 divergent transcript","termid":"PBO:0047400"}


id: PBO:0085162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide pyrophosphatase/phosphodiesterase; mediates extracellular nucleotide phosphate hydrolysis along with Npp1p and Pho5p; activity and expression enhanced during conditions of phosphate starvation; involved in spore wall assembly; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; NPP2 has a paralog, NPP1, that arose from the whole genome duplication; npp1 npp2 double mutant exhibits reduced dityrosine fluorescence relative to single mutants","termid":"PBO:0085162"}


id: PBO:0052547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor B1","termid":"PBO:0052547"}


id: PBO:0087533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133","termid":"PBO:0087533"}


id: PBO:0039228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 2","termid":"PBO:0039228"}


id: GO:0019171
data:
  {"annotated_genes":["SJAG_00305","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74091],"is_not":false,"summary":null,"term":"GO:0019171"},{"annotations":[96201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008659"},{"annotations":[96202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004317"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a (3R)-hydroxyacyl-[acyl-carrier-protein] = a (2E)-enoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["RHEA:13097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:4.2.1.59","MetaCyc:4.2.1.59-RXN"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"related"},{"name":"3-hydroxyacyl-ACP dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier protein] dehydratase activity","type":"exact"},{"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity","type":"broad"}],"termid":"GO:0019171","terms_by_termid":{"GO:0004317":null,"GO:0008659":null,"GO:0019171":null}}


id: FYPO:0007688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome does not occur during metaphase of the first meiotic nuclear division.","definition_xrefs":["PMID:16541024","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to kinetochore during meiosis I","termid":"FYPO:0004763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to kinetochore during meiotic metaphase I","synonyms":[{"name":"abolished protein localisation to kinetochore during meiotic metaphase I","type":"exact"},{"name":"abolished protein localization to kinetochore during meiosis I metaphase","type":"exact"},{"name":"protein localization to kinetochore abolished during meiotic metaphase I","type":"exact"}],"termid":"FYPO:0007688"}


id: GO:0031663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a lipopolysaccharide (LPS) to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Lipopolysaccharides are major components of the outer membrane of Gram-negative bacteria, making them prime targets for recognition by the immune system.","definition_xrefs":["GOC:mah","PMID:15379975","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"cellular response to lipopolysaccharide","termid":"GO:0071222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"LPS-mediated signaling pathway","type":"exact"},{"name":"lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031663"}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_01172","SJAG_04065","SJAG_00319","SJAG_01054","SJAG_02978","SJAG_04754","SJAG_03572","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72691,74932,77319,78800,112258],"is_not":false,"summary":null,"term":"GO:0009982"},{"annotations":[109475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[97917,101587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["RHEA:48348","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01054":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-6786583","GO:0016439","Reactome:R-HSA-6790905","Reactome:R-HSA-6787566","Reactome:R-HSA-8870289","Reactome:R-HSA-6782381"],"termid":"GO:0009982","terms_by_termid":{"GO:0009982":null,"GO:0106029":null,"GO:0106032":null}}


id: GO:0045814
data:
  {"annotated_genes":["SJAG_03689","SJAG_00087","SJAG_01204","SJAG_01878","SJAG_01664","SJAG_02401","SJAG_03255","SJAG_03945","SJAG_03624","SJAG_04879","SJAG_03627","SJAG_04396","SJAG_02416","SJAG_02165","SJAG_03982","SJAG_01511","SJAG_04574","SJAG_00756","SJAG_03193","SJAG_03042","SJAG_04369","SJAG_01540","SJAG_01046","SJAG_03916","SJAG_04030","SJAG_01823","SJAG_01745","SJAG_02119","SJAG_00302","SJAG_02622","SJAG_03394","SJAG_04253","SJAG_01601","SJAG_01579","SJAG_02382","SJAG_00896","SJAG_01836","SJAG_03664","SJAG_01867","SJAG_02594","SJAG_00701","SJAG_00934","SJAG_02908","SJAG_04755","SJAG_04768","SJAG_02381","SJAG_03635","SJAG_02701","SJAG_00335","SJAG_04213","SJAG_03128","SJAG_02621","SJAG_02990","SJAG_01599","SJAG_00436","SJAG_04389","SJAG_03356","SJAG_02723","SJAG_01610","SJAG_00160","SJAG_01331","SJAG_04061","SJAG_04039","SJAG_03745","SJAG_04186","SJAG_02817","SJAG_02725","SJAG_03543","SJAG_03680","SJAG_00341","SJAG_01075","SJAG_01938","SJAG_02778","SJAG_04141","SJAG_02409","SJAG_03844","SJAG_02846","SJAG_03118","SJAG_01926","SJAG_00769","SJAG_03997","SJAG_00676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88797,88831,92754,92864,98522,109321],"is_not":false,"summary":null,"term":"GO:0045814"},{"annotations":[106505,108791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140719"},{"annotations":[98627,111652,89673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140718"},{"annotations":[98461,112819,86430,112211,107822,110394,94625,107823,98628,94647,89674,91711,108257,83913,94408,107824],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033696"},{"annotations":[70555,99592,109173,109296,110533,114273,114274,89934,88208,108485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031507"},{"annotations":[76326,102001],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[103803],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[76325],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061186"},{"annotations":[109591,98196,85752,99497,104619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031508"},{"annotations":[86988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140462"},{"annotations":[94467],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031453"},{"annotations":[107339,109592,99498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[86481,94076],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0031445"},{"annotations":[92725,95770],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090052"},{"annotations":[112820],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[92726,112821,87495,113159,95771],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[100358,107093,96169,104416,103117,108259,102688,99499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031048"},{"annotations":[108860,71571,103483,94631,107340,105749,113831,92274,112764,91080,99500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030466"},{"annotations":[86465,87870,83264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[101661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[86918,109734,113142,113832,111112,89683,109482,84566,110548,108861,84511,94632,106446,107434,95037,112765,92275,105750,113036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[99501,85753,86919,108862,84178,112766,113833,92276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031509"}]},"cv_name":"biological_process","definition":"An epigenetic process that silences gene expression at specific genomic regions through chromatin remodeling either by modifying higher order chromatin fiber structure, nucleosomal histones, or the cytosine DNA methylation.","definition_xrefs":["PMID:22243696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"epigenetic regulation of gene 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regulation of gene expression, epigenetic","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:35226668":null},"synonyms":[{"name":"down regulation of gene expression, epigenetic","type":"exact"},{"name":"down-regulation of gene expression, epigenetic","type":"exact"},{"name":"downregulation of gene expression, epigenetic","type":"exact"},{"name":"gene silencing","type":"related"},{"name":"inhibition of gene expression, epigenetic","type":"narrow"}],"termid":"GO:0045814","terms_by_termid":{"GO:0000183":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0045814":null,"GO:0060906":null,"GO:0061186":null,"GO:0061188":null,"GO:0090052":null,"GO:0140462":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0049870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase with zinc finger 2","termid":"PBO:0049870"}


id: PBO:0003765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa34 (predicted)","termid":"PBO:0003765"}


id: PBO:0079032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-5","termid":"PBO:0079032"}


id: PBO:0059376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 1","termid":"PBO:0059376"}


id: GO:1901359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tungstate.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tungstate binding","termid":"GO:1901359"}


id: PBO:0049922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase for meiosis 1","termid":"PBO:0049922"}


id: FYPO:0001270
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the separation of chromosomes into two distinct unequal masses, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:22711988","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unequal mitotic sister chromatid segregation","termid":"FYPO:0003241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation","synonyms":[{"name":"aneuploidy","type":"related"},{"name":"complete but unequal mitotic chromosome segregation","type":"exact"},{"name":"complete but unequal mitotic sister chromatid separation","type":"related"},{"name":"complete but unequal mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"complete but unequal sister chromatid segregation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001270"}


id: PBO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 2","termid":"PBO:0048808"}


id: PBO:0085616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in early pre-mRNA splicing; component of the pre-mRNA-U1 snRNP complex, the commitment complex; interacts with Msl5p/BBP splicing factor and Sub2p; similar to metazoan splicing factor U2AF65","termid":"PBO:0085616"}


id: GO:0036191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indolin-2-one + NAD(P)H + H+ + O2 = 3-hydroxyindolin-2-one + NAD(P)+ + H2O.","definition_xrefs":["RHEA:31919","EC:1.14.14.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"indolin-2-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07421"],"synonyms":[{"name":"indolin-2-one,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"}],"termid":"GO:0036191"}


id: PBO:0047752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha pseudogene 2","termid":"PBO:0047752"}


id: GO:0016980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatine + H2O = sarcosine + urea.","definition_xrefs":["RHEA:22456","EC:3.5.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"creatinase activity","secondary_identifiers":["KEGG_REACTION:R01566","MetaCyc:CREATINASE-RXN"],"synonyms":[{"name":"creatine amidinohydrolase activity","type":"related"}],"termid":"GO:0016980"}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: PBO:0030468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pantothenate_import","termid":"PBO:0030468"}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["PMID:8631713","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0072999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 1","termid":"PBO:0072999"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00929","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["PMID:21705209","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: GO:0060441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a highly ordered sequence of patterning events generates the branched epithelial tubes of the lung, consisting of reiterated combinations of bud outgrowth, elongation, and dichotomous subdivision of terminal units.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"lung morphogenesis","termid":"GO:0060425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial tube branching involved in lung morphogenesis","synonyms":[{"name":"lung branching morphogenesis","type":"exact"}],"termid":"GO:0060441"}


id: GO:0032769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of a monooxygenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monooxygenase activity","termid":"GO:0032768"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monooxygenase activity","synonyms":[{"name":"down regulation of monooxygenase activity","type":"exact"},{"name":"down-regulation of monooxygenase activity","type":"exact"},{"name":"downregulation of monooxygenase activity","type":"exact"},{"name":"inhibition of monooxygenase activity","type":"narrow"}],"termid":"GO:0032769"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: GO:0008808
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88642],"is_not":false,"summary":null,"term":"GO:0008808"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylglycerol = diphosphatidylglycerol (cardiolipin) + glycerol.","definition_xrefs":["RHEA:31451","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016780","GO:0016740"],"is_obsolete":false,"name":"cardiolipin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043788","MetaCyc:CARDIOLIPSYN-RXN"],"synonyms":[{"name":"cardiolipin synthase 2 activity","type":"related"},{"name":"cardiolipin synthetase 2 activity","type":"related"},{"name":"cardiolipin synthetase activity","type":"broad"},{"name":"diphosphatidylglycerol synthase activity","type":"exact"}],"termid":"GO:0008808","terms_by_termid":{"GO:0008808":null}}


id: FYPO:0004422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation","termid":"FYPO:0004422"}


id: PBO:0017493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase, predicted calcium channel regulator","termid":"PBO:0017493"}


id: PBO:0088876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphopantothenate-cysteine ligase Cab2","termid":"PBO:0088876"}


id: GO:0120170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intraciliary transport particle B (IFT B) complex.","definition_xrefs":["PMID:20889716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"intraciliary transport particle B binding","synonyms":[{"name":"IFT B complex binding","type":"related"},{"name":"intraciliary transport complex B binding","type":"exact"},{"name":"intraflagellar transport complex B binding","type":"exact"},{"name":"intraflagellar transport particle B binding","type":"exact"}],"termid":"GO:0120170"}


id: GO:0031917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["PMID:8658594","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic plasticity","termid":"GO:0031914"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic metaplasticity","synonyms":[{"name":"down regulation of synaptic metaplasticity","type":"exact"},{"name":"down-regulation of synaptic metaplasticity","type":"exact"},{"name":"downregulation of synaptic metaplasticity","type":"exact"},{"name":"inhibition of synaptic metaplasticity","type":"narrow"}],"termid":"GO:0031917"}


id: PBO:0049688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart and neural crest derivatives expressed 1","termid":"PBO:0049688"}


id: PATO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001062 absolute elasticity (obsolete PATO:0001062)","termid":"PATO:0001062"}


id: PBO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A like (without C2 domains)","termid":"PBO:0070437"}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: FYPO:0005594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at a replication fork pausing site within the eukaryotic rDNA repeat spacer is increased.","definition_xrefs":["PomBase:mah","PMID:25965521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at rDNA replication fork barrier","synonyms":[{"name":"increased protein localisation to chromatin at rDNA replication fork barrier","type":"exact"},{"name":"increased protein localization to chromatin at rDNA replication fork barrier during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at rDNA replication fork barrier during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at ribosomal DNA replication fork barrier","type":"exact"}],"termid":"FYPO:0005594"}


id: PBO:0051511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKAROS family zinc finger 1","termid":"PBO:0051511"}


id: PBO:0042875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 141","termid":"PBO:0042875"}


id: PBO:0087562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Snt2C complex, RING finger ubiquitin ligase (E3); physically associates with Ecm5p and Rpd3p; along with Ecm5p, recruits Rpd3p to small number of promoters; colocalizes with Ecm5p, independently of Rpd3p, to promoters of stress response genes upon oxidative stress; involved in ubiquitination, degradation of excess histones; interacts with Ubc4p; role in regulating genes encoding amine transporters; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087562"}


id: GO:0160105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(22) in tRNA + S-adenosyl-L-methionine = H(+) + N(1)-methyladenosine(22) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0140101","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"tRNA (adenine(22)-N1)-methyltransferase activity","secondary_identifiers":["RHEA:43144"],"synonyms":[{"name":"tRNA (adenine(22)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(22)-N(1))-methyltransferase activity","type":"exact"}],"termid":"GO:0160105"}


id: PBO:0075888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 pseudogene 1","termid":"PBO:0075888"}


id: MOD:01634
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-aspartic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid removal","termid":"MOD:01634"}


id: PBO:0035921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K9_specific)_activity","termid":"PBO:0035921"}


id: GO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell differentiation","termid":"GO:0045601"}


id: GO:0106146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sideretin.","definition_xrefs":["GOC:lr","PMID:29581584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"sideretin biosynthesis","termid":"GO:0106146"}


id: GO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation","synonyms":[{"name":"down regulation of epithelial cell differentiation","type":"exact"},{"name":"down-regulation of epithelial cell differentiation","type":"exact"},{"name":"downregulation of epithelial cell differentiation","type":"exact"},{"name":"inhibition of epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030857"}


id: PBO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt5","termid":"PBO:0003220"}


id: PBO:0033767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033767"}


id: PBO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pap1/Caf3","termid":"PBO:0001410"}


id: FYPO:0004593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that shows detectable differences from normal at the level of an individual cell, when the cell is in the vegetative growth phase of the cell cycle, and after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vegetative cell phenotype following normal mitosis","synonyms":[{"name":"abnormal cell phenotype following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and interphase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal mitotic nuclear division","type":"exact"},{"name":"abnormal vegetative cell phenotype following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004593"}


id: GO:0110147
data:
  {"annotated_genes":["SJAG_04679","SJAG_05338","SJAG_04896"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90980,92363,114000],"is_not":false,"summary":null,"term":"GO:0110147"}]},"cv_name":"biological_process","definition":"A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["GOC:al","PMID:24115911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"protein maturation by nickel ion transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110147","terms_by_termid":{"GO:0110147":null}}


id: PBO:0050863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 2","termid":"PBO:0050863"}


id: GO:0099126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex acting as ligand of the transforming growth factor beta receptor complex, typically a homodimer of any of the TFGbeta isoforms. The precursor of TGFbeta proteins is cleaved into mature TGFbeta and the latency-associated peptide (LAP), which remains non-covalently linked to mature TGFbeta rendering it inactive. TGFbeta is activated by dimerization and dissociation of the LAP.","definition_xrefs":["GOC:bhm","PMID:22943793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transforming growth factor beta complex","synonyms":[{"name":"TGF-beta complex","type":"exact"},{"name":"TGF-beta dimer","type":"exact"},{"name":"TGFB complex","type":"exact"},{"name":"TGFB dimer","type":"exact"},{"name":"TGFbeta complex","type":"exact"},{"name":"TGFbeta dimer","type":"exact"}],"termid":"GO:0099126"}


id: GO:0043703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a photoreceptor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate determination","termid":"GO:0048664"},{"relation_name":"part_of","term_name":"photoreceptor cell fate commitment","termid":"GO:0046552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate determination","termid":"GO:0043703"}


id: GO:0034018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-anhydro-4-deoxy-D-glycero-hex-3-en-2-ulose = 1,5-anhydro-4-deoxy-D-glycero-hex-1-en-3-ulose.","definition_xrefs":["EC:5.3.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"ascopyrone tautomerase activity","secondary_identifiers":["MetaCyc:5.3.3.15-RXN","RHEA:22568"],"synonyms":[{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose delta3-delta1-isomerase activity","type":"related"},{"name":"1,5-anhydro-D-glycero-hex-3-en-2-ulose tautomerase activity","type":"related"},{"name":"APM tautomerase activity","type":"related"},{"name":"APTM","type":"related"},{"name":"ascopyrone P tautomerase activity","type":"related"},{"name":"ascopyrone intramolecular oxidoreductase activity","type":"related"},{"name":"ascopyrone isomerase activity","type":"related"}],"termid":"GO:0034018"}


id: GO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclease activity","termid":"GO:0032069"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonuclease activity","termid":"GO:0060700"}


id: PR:000027572
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:20929775","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.2","termid":"PR:000027571"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"SPBC8D2.04, PI060","type":"related"},{"name":"Spom-hht2","type":"exact"}],"termid":"PR:000027572"}


id: FYPO:0002539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002539"}


id: PBO:0072417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 22","termid":"PBO:0072417"}


id: PR:O14096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.13c","synonyms":[{"name":"Spom972h-SPAC2F3.13c","type":"exact"}],"termid":"PR:O14096"}


id: PBO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein Bqt3","termid":"PBO:0005105"}


id: GO:0007257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase (JNK).","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JUN kinase activity (obsolete GO:0007257)","synonyms":[{"name":"activation of SAPK activity","type":"broad"}],"termid":"GO:0007257"}


id: PBO:0044936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyguanosine kinase","termid":"PBO:0044936"}


id: SO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Uridine_5_oxyacetic_acid_methyl_ester is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine_five_oxyacetic_acid_methyl_ester","secondary_identifiers":["RNAMOD:065"],"synonyms":[{"name":"mcmo5U","type":"exact"},{"name":"uridine 5-oxyacetic acid methyl ester","type":"exact"},{"name":"uridine five oxyacetic acid methyl ester","type":"exact"}],"termid":"SO:0001357"}


id: PBO:0080716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN helicase interacting protein 1","termid":"PBO:0080716"}


id: SO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3'-most region of a precursor transcript that is clipped off during processing.","direct_ancestors":[{"relation_name":"is_a","term_name":"clip","termid":"SO:0000303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_clip","synonyms":[{"name":"3'-clip","type":"exact"},{"name":"three prime clip","type":"exact"}],"termid":"SO:0000557"}


id: FYPO:0006893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased inositol hexakisphosphate kinase activity","synonyms":[{"name":"reduced inositol hexakisphosphate kinase activity","type":"exact"}],"termid":"FYPO:0006893"}


id: PBO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 7","termid":"PBO:0048238"}


id: FYPO:0000800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a substance released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"increased concentration of substance in growth medium","synonyms":[{"name":"increased accumulation of substance in growth medium","type":"related"},{"name":"increased level of substance in growth medium","type":"exact"},{"name":"increased release of substance into growth medium","type":"related"}],"termid":"FYPO:0000800"}


id: GO:0090599
data:
  {"annotated_genes":["SJAG_03280","SJAG_02131","SJAG_03824","SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76100],"is_not":false,"summary":null,"term":"GO:0090599"},{"annotations":[97056,97057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032450"},{"annotations":[97059,97058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044654"},{"annotations":[75895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-linked alpha-D-glucose residue with release of alpha-D-glucose.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03280":null,"SJAG_03824":null,"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9036729","EC:3.2.1.20","Reactome:R-HSA-9036727"],"termid":"GO:0090599","terms_by_termid":{"GO:0004575":null,"GO:0032450":null,"GO:0044654":null,"GO:0090599":null}}


id: PBO:0089610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, 5' UTR  of Atp19","termid":"PBO:0089610"}


id: GO:0047493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + ceramide = CMP + H+ + sphingomyelin.","definition_xrefs":["RHEA:16273","EC:2.7.8.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ceramide cholinephosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01891","MetaCyc:CERAMIDE-CHOLINEPHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"CDP-choline:N-acylsphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-ceramide transferase activity","type":"related"}],"termid":"GO:0047493"}


id: PBO:0075622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 3","termid":"PBO:0075622"}


id: SO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Allelic exclusion is a process occurring in diploid organisms, where a gene is inactivated and not expressed in that cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelically_excluded","synonyms":[{"name":"allelically excluded","type":"exact"}],"termid":"SO:0000137"}


id: GO:1902300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galactaric acid anion (galactarate) is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transport","termid":"GO:0042869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"galactarate transmembrane transport","secondary_identifiers":["GO:0042871"],"synonyms":[{"name":"D-galactarate transport","type":"related"},{"name":"galactarate transport","type":"related"},{"name":"galactaric acid anion transport","type":"exact"}],"termid":"GO:1902300"}


id: MOD:00476
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an galactose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosylated residue","termid":"MOD:00434"},{"relation_name":"is_a","term_name":"galactosylated","termid":"MOD:00728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"galactosylated residue","synonyms":[{"name":"GalRes","type":"exact"}],"termid":"MOD:00476"}


id: GO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"proline transport","termid":"GO:0015824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of proline transport","termid":"GO:0070881"}


id: GO:0097103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial stalk cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial stalk cell is a specialized endothelial cell which follows behind the tip cell of an angiogenic sprout.","definition_xrefs":["GOC:dgh","PMID:21521739","CL:0002671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial stalk cell fate specification","synonyms":[{"name":"angiogenic stalk cell fate specification","type":"exact"}],"termid":"GO:0097103"}


id: PBO:0043496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTN4 antisense RNA 1","termid":"PBO:0043496"}


id: GO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of renin into the blood stream by juxtoglomerular cells.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","termid":"GO:0001999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"renin secretion into blood stream","synonyms":[{"name":"renin release into blood stream","type":"exact"}],"termid":"GO:0002001"}


id: PBO:0088406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-7","termid":"PBO:0088406"}


id: GO:0098773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermis development","termid":"GO:0008544"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skin epidermis development","termid":"GO:0098773"}


id: PBO:0062544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily I member 3 pseudogene","termid":"PBO:0062544"}


id: FYPO:0005325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-free translesion synthesis is normal (i.e. indistinguishable from wild type). Error-free translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across from the lesion.","definition_xrefs":["GO:0070987","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal error-free translesion synthesis","synonyms":[{"name":"normal error-free translesion synthesis during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005325"}


id: PBO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035858"}


id: PBO:0070482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 17","termid":"PBO:0070482"}


id: PBO:0039110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor","termid":"PBO:0039110"}


id: GO:0007606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of chemical stimulus","synonyms":[{"name":"chemosensory perception","type":"exact"}],"termid":"GO:0007606"}


id: GO:0032260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus received in the context of the jasmonic acid- and ethylene (ethene)-dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to jasmonic acid","termid":"GO:0009753"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance","synonyms":[{"name":"response to jasmonic acid stimulus during jasmonic acid and ethylene-dependent systemic resistance","type":"related"}],"termid":"GO:0032260"}


id: PR:O13779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.14 gene.","definition_xrefs":["UniProtKB:O13779","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C17A12.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.14","synonyms":[{"name":"Spom972h-SPAC17A2.14","type":"exact"}],"termid":"PR:O13779"}


id: MOD:00505
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:15456300","DeltaMass:0","Unimod:136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benzoyl labeling reagent light form (N-term and K)","synonyms":[{"name":"Benzoyl","type":"related"},{"name":"Benzoyl (Bz)","type":"exact"},{"name":"labeling reagent light form (N-term & K)","type":"related"}],"termid":"MOD:00505"}


id: GO:1900162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid translocation","termid":"GO:0061093"},{"relation_name":"is_a","term_name":"negative regulation of lipid transporter activity","termid":"GO:0110114"},{"relation_name":"is_a","term_name":"regulation of phospholipid scramblase activity","termid":"GO:1900161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of phospholipid scramblase activity","synonyms":[{"name":"down regulation of phospholipid scramblase activity","type":"exact"},{"name":"down-regulation of phospholipid scramblase activity","type":"exact"},{"name":"downregulation of phospholipid scramblase activity","type":"exact"},{"name":"inhibition of phospholipid scramblase activity","type":"narrow"}],"termid":"GO:1900162"}


id: PBO:0088791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC2) subunit Rad15","termid":"PBO:0088791"}


id: PBO:0087829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIB B-related factor; one of three subunits of RNA polymerase III transcription initiation factor TFIIIB, binds TFIIIC and TBP and recruits RNA pol III to promoters, amino-terminal half is homologous to TFIIB; mutations in human homolog are associated with autosomal recessive cerebellar-facial-dental syndrome","termid":"PBO:0087829"}


id: PBO:0050750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 12","termid":"PBO:0050750"}


id: GO:0050423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine + 2 O2 = thiamine acetic acid + 2 H2O2.","definition_xrefs":["MetaCyc:THIAMIN-OXIDASE-RXN","EC:1.1.3.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine oxidase activity","secondary_identifiers":["RHEA:21280"],"synonyms":[{"name":"thiamin dehydrogenase activity","type":"related"},{"name":"thiamin oxidase activity","type":"exact"},{"name":"thiamin:oxygen 5-oxidoreductase activity","type":"related"},{"name":"thiamine dehydrogenase activity","type":"related"},{"name":"thiamine:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050423"}


id: PBO:0030189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_topoisomerase_II_activity","termid":"PBO:0030189"}


id: GO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the Fc region of an immunoglobulin protein and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"immunoglobulin receptor activity","secondary_identifiers":["GO:0016489"],"synonyms":[{"name":"FC receptor activity","type":"exact"}],"termid":"GO:0019763"}


id: PBO:0073622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 8","termid":"PBO:0073622"}


id: PBO:0091702
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YKR002W","termid":"PBO:0091702"}


id: PBO:0058907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12125","termid":"PBO:0058907"}


id: GO:0071116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta1 integrin complex bound to CYR61, a cysteine-rich protein involved in angiogenesis.","definition_xrefs":["PMID:12826661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha6-beta1 integrin-CYR61 complex","synonyms":[{"name":"ITGA6-ITGB1-CYR61 complex","type":"narrow"}],"termid":"GO:0071116"}


id: GO:0003811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any of a set of activities involved in the complement cascade.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete complement activity (obsolete GO:0003811)","synonyms":[{"name":"complement activity","type":"exact"}],"termid":"GO:0003811"}


id: PBO:0014234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit ubiquitin-protein ligase E3","termid":"PBO:0014234"}


id: PBO:0082817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial protein of unknown function; processed by both mitochondrial processing peptidase and mitochondrial octapeptidyl aminopeptidase; gene contains the nested antisense gene NAG1","termid":"PBO:0082817"}


id: MOD:00832
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminogalactosyl)-L-asparagine.","definition_xrefs":["RESID:AA0420","PubMed:8262914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)galactosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (GalNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylamino)galactosyl-L-asparagine","type":"exact"},{"name":"N4-(N-acetylgalactosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylgalactosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GalNAcAsn","type":"exact"}],"termid":"MOD:00832"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: PBO:0017996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amno acid transmembrane transporter Fnx2","termid":"PBO:0017996"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: PBO:0041596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 7","termid":"PBO:0041596"}


id: PBO:0079828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 3","termid":"PBO:0079828"}


id: PBO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1 (predicted)","termid":"PBO:0032766"}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_00722","SJAG_00271","SJAG_04491","SJAG_00311","SJAG_03719","SJAG_01275","SJAG_04492","SJAG_03697","SJAG_01581","SJAG_00689","SJAG_02759","SJAG_01454","SJAG_04330","SJAG_03012","SJAG_02427","SJAG_01839","SJAG_02830","SJAG_03466","SJAG_01811","SJAG_04395","SJAG_02436","SJAG_04992","SJAG_00882","SJAG_03496","SJAG_01606","SJAG_01494","SJAG_03413","SJAG_04346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71351,71582,72164,72282,74378,74623,75323,75332,75487,75836,76284,77522,77952,78163,78557,88802,90406,93491,94674,94938,98904,101359,111353,113230],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[93402,78715,72489],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[78716,72490,107649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01581":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03012":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0030684"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0036299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom6 (predicted)","termid":"PBO:0036299"}


id: PBO:0046783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 3","termid":"PBO:0046783"}


id: PBO:0088255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3","termid":"PBO:0088255"}


id: PBO:0053196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 2","termid":"PBO:0053196"}


id: GO:0019158
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75382,93524],"is_not":false,"summary":null,"term":"GO:0019158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-mannose = ADP + D-mannose 6-phosphate.","definition_xrefs":["EC:2.7.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"mannokinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["RHEA:11028","MetaCyc:MANNKIN-RXN"],"synonyms":[{"name":"ATP:D-mannose 6-phosphotransferase activity","type":"related"},{"name":"D-fructose (D-mannose) kinase activity","type":"related"},{"name":"mannokinase (phosphorylating)","type":"related"}],"termid":"GO:0019158","terms_by_termid":{"GO:0019158":null}}


id: PBO:0054109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1474","termid":"PBO:0054109"}


id: PBO:0068299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5 pseudogene 1","termid":"PBO:0068299"}


id: GO:0004275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys6-Ile7 bond in trypsinogen.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete enteropeptidase activity (obsolete GO:0004275)","synonyms":[{"name":"enterokinase activity","type":"related"},{"name":"enteropeptidase activity","type":"exact"}],"termid":"GO:0004275"}


id: PBO:0059732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 6","termid":"PBO:0059732"}


id: GO:0009174
data:
  {"annotated_genes":["SJAG_04709","SJAG_00533","SJAG_00444","SJAG_04354","SJAG_04713","SJAG_00694","SJAG_03708","SJAG_00964","SJAG_03164","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107145,111828,94007,85168,89017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[68147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[110072,84201,83233,87599,88569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate biosynthetic process","termid":"GO:0009130"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate formation","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009174","terms_by_termid":{"GO:0009224":null,"GO:0044205":null,"GO:0044206":null}}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: MOD:00022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-methionine.","definition_xrefs":["ChEBI:29983","DeltaMass:0","PubMed:6411710","RESID:AA0013","PubMed:6692818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine residue","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"2-azanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"L-(-)-methionine","type":"exact"},{"name":"L-methionine","type":"exact"},{"name":"Met","type":"exact"},{"name":"S-methyl-L-homocysteine","type":"exact"},{"name":"alpha-amino-gamma-methylmercaptobutyric acid","type":"exact"},{"name":"alpha-amino-gamma-methylthiobutyric acid","type":"exact"},{"name":"gamma-methylthio-alpha-aminobutyric acid","type":"exact"}],"termid":"MOD:00022"}


id: FYPO:0001640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular leucine level","synonyms":[{"name":"normal cellular L-leucine level","type":"exact"},{"name":"normal cellular leucine level during mitotic cell cycle","type":"related"},{"name":"normal cellular leucine level during vegetative growth","type":"exact"},{"name":"normal level of leucine in cell","type":"exact"}],"termid":"FYPO:0001640"}


id: GO:0000155
data:
  {"annotated_genes":["SJAG_02183","SJAG_01587","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76809,90821,113317],"is_not":false,"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.","definition_xrefs":["GOC:mcc","GOC:bf","PMID:10966457","PMID:20223701","PMID:9191038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0016301","GO:0016740","GO:0140096","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"phosphorelay sensor kinase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:2.7.3.-"],"synonyms":[{"name":"two-component sensor activity","type":"narrow"},{"name":"two-component sensor molecule","type":"narrow"},{"name":"two-component system sensor activity","type":"narrow"}],"termid":"GO:0000155","terms_by_termid":{"GO:0000155":null}}


id: GO:0070979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which ubiquitin monomers are attached to a protein, and then ubiquitin polymers are formed by linkages between lysine residues at position 11 of the ubiquitin monomers. K11-linked polyubiquitination targets the substrate protein for degradation. The anaphase-promoting complex promotes the degradation of mitotic regulators by assembling K11-linked polyubiquitin chains.","definition_xrefs":["PMID:18485873","PMID:21113135","GOC:pr","PMID:20655260","GOC:sp","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K11-linked ubiquitination","termid":"GO:0070979"}


id: PBO:0048943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi SNAP receptor complex member 1","termid":"PBO:0048943"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["UniProtKB:Q10247","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PBO:0062879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 antisense RNA 1 (head to head)","termid":"PBO:0062879"}


id: PBO:0057282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 503","termid":"PBO:0057282"}


id: PBO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 12","termid":"PBO:0071547"}


id: PBO:0086504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein; in the Sigma 1278B strain background YLL053C is contiguous with AQY2 which encodes an aquaporin","termid":"PBO:0086504"}


id: PBO:0017981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2 (predicted)","termid":"PBO:0017981"}


id: PBO:0076055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomatin like 1","termid":"PBO:0076055"}


id: PBO:0042487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12","termid":"PBO:0042487"}


id: GO:0014060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of epinephrine secretion","synonyms":[{"name":"regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0014060"}


id: SO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from tRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_SINE_retrotransposon","synonyms":[{"name":"RST retrotransposon","type":"exact"},{"name":"tRNA SINE element","type":"exact"},{"name":"tRNA SINE retrotransposon","type":"exact"}],"termid":"SO:0002274"}


id: PBO:0049240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 8","termid":"PBO:0049240"}


id: PBO:0090413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) cytochrome b subunit","termid":"PBO:0090413"}


id: GO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage as well as the unwound DNA. The stabilization of the protein-DNA complex ensures proper positioning of the preincision complex before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex stabilization","termid":"GO:0006293"}


id: PBO:0062820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute carrier partner 1","termid":"PBO:0062820"}


id: PBO:0090971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn3","termid":"PBO:0090971"}


id: SO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_7_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_7_dimethylguanosine","secondary_identifiers":["RNAMOD:090"],"synonyms":[{"name":"N2 7 dimethylguanosine","type":"exact"},{"name":"N2,7-dimethylguanosine","type":"exact"},{"name":"m2,7G","type":"exact"}],"termid":"SO:0001338"}


id: PBO:0086643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0086643"}


id: FYPO:0009002
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A mitochondrion distribution phenotype observed during mitotic interphase in which the length fraction of cytoplasmic microtubules that is bound to mitochondria is increased with respect to the wild type.","definition_xrefs":["PomBase:mlr","PMID:36633091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular mitochondrion distribution","termid":"FYPO:0000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitochondrial-associated microtubule fraction during mitotic interphase","synonyms":[{"name":"increased microtubule-associated mitochondrial fraction during mitotic interphase","type":"related"}],"termid":"FYPO:0009002"}


id: PBO:0067833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 135","termid":"PBO:0067833"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: GO:0061817
data:
  {"annotated_genes":["SJAG_01564","SJAG_04413","SJAG_04417","SJAG_01168","SJAG_02626","SJAG_00053","SJAG_01437","SJAG_03247","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71879,86096,87119,92981,97231,106897,113197,113703,113957],"is_not":false,"summary":null,"term":"GO:0061817"}]},"cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers.","definition_xrefs":["PMID:26877082","PMID:27875684","GOC:dph","PMID:23237950","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0140056"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane tethering","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ER-plasma membrane tethering","type":"exact"}],"termid":"GO:0061817","terms_by_termid":{"GO:0061817":null}}


id: PR:O14289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- leu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.03","synonyms":[{"name":"IPMI (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-leu2","type":"exact"},{"name":"alpha-IPM isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"isopropylmalate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14289"}


id: PBO:0061838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor like 1","termid":"PBO:0061838"}


id: GO:0070572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron projection regeneration, the regrowth of neuronal processes such as axons or dendrites following their loss or damage.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"positively_regulates","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron projection regeneration","termid":"GO:0070572"}


id: PBO:0003746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L35 (predicted)","termid":"PBO:0003746"}


id: MOD:00266
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a peptide bond between a C-terminal L-glutamic acid residue and one or more free L-glutamic acid molecules to form N-(L-glutamyl)-poly-L-glutamic acid.","definition_xrefs":["RESID:AA0261","PubMed:2570347","PubMed:328274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-L-glutamyl-poly-L-glutamic acid","termid":"MOD:00266"}


id: GO:2000562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell proliferation","termid":"GO:0046642"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000515"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell proliferation","termid":"GO:2000561"},{"relation_name":"negatively_regulates","term_name":"CD4-positive, alpha-beta T cell proliferation","termid":"GO:0035739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of CD4-positive, alpha-beta T cell proliferation","termid":"GO:2000562"}


id: PBO:0091240
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncation LoF variant reverts to normal in strain CBS5557","termid":"PBO:0091240"}


id: PBO:0014273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUppressor of Cdc2 ts-mutations","termid":"PBO:0014273"}


id: PBO:0071432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 38","termid":"PBO:0071432"}


id: PBO:0051689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INMT-MINDY4 readthrough (NMD candidate)","termid":"PBO:0051689"}


id: GO:0030141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory vesicle","termid":"GO:0099503"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"secretory granule","synonyms":[{"name":"secretory vesicle","type":"broad"}],"termid":"GO:0030141"}


id: PBO:0066598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 1","termid":"PBO:0066598"}


id: PBO:0041414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 33","termid":"PBO:0041414"}


id: GO:1901271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipooligosaccharide.","definition_xrefs":["GOC:yaf","UniPathway:UPA00501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide biosynthetic process","synonyms":[{"name":"lipooligosaccharide anabolism","type":"exact"},{"name":"lipooligosaccharide biosynthesis","type":"exact"},{"name":"lipooligosaccharide formation","type":"exact"},{"name":"lipooligosaccharide synthesis","type":"exact"}],"termid":"GO:1901271"}


id: FYPO:0004836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein oxidation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein oxidation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased protein oxidation during mitotic cell cycle","type":"related"},{"name":"reduced protein oxidation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0004836"}


id: PBO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.11","termid":"PBO:0000510"}


id: PBO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Tup11","termid":"PBO:0003076"}


id: FYPO:0007307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation at centromere during vegetative growth","termid":"FYPO:0000893"},{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3K14 acetylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007307"}


id: GO:1904210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a VCP-NPL4-UFD1 AAA ATPase complex.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000079","PMID:17000876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904210"}


id: PBO:0046762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 3 pseudogene 1","termid":"PBO:0046762"}


id: FYPO:0002762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, spheroid cell","synonyms":[{"name":"inviable after spore germination, undivided spheroid cell","type":"exact"},{"name":"inviable following spore germination, without cell division, spheroid cell","type":"exact"},{"name":"inviable germinated spore, without cell division, spheroid cell","type":"exact"},{"name":"lethal after spore germination, without cell division, spheroid cell","type":"exact"}],"termid":"FYPO:0002762"}


id: PBO:0074395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 5","termid":"PBO:0074395"}


id: FYPO:0003092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at a replication fork pausing site within the mating-type region in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased chromatin binding at mating-type region replication fork barrier","synonyms":[{"name":"reduced chromatin binding at mating-type region replication fork barrier","type":"exact"}],"termid":"FYPO:0003092"}


id: GO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.","definition_xrefs":["RHEA:28374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALGLDAPAALIG-RXN","EC:6.3.2.10"],"termid":"GO:0008766"}


id: PBO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translin-associated Factor X","termid":"PBO:0018117"}


id: MOD:00731
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a ribose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"ribosylated","synonyms":[{"name":"Rib","type":"exact"}],"termid":"MOD:00731"}


id: PBO:0038788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase 2","termid":"PBO:0038788"}


id: GO:0043988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 28 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S28 phosphorylation (obsolete GO:0043988)","synonyms":[{"name":"histone H3 phosphorylation at S28","type":"exact"},{"name":"histone H3S28 phosphorylation","type":"exact"}],"termid":"GO:0043988"}


id: GO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from a trimetylated lysine at position 4 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 demethylation, trimethyl-H3-K4-specific (obsolete GO:0034721)","synonyms":[{"name":"H3K4 demethylation (me3)","type":"exact"},{"name":"histone H3-K4 tridemethylation","type":"related"}],"termid":"GO:0034721"}


id: GO:1903518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single strand break repair.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:17395247","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"positively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of single strand break repair","synonyms":[{"name":"activation of single strand break repair","type":"narrow"},{"name":"up regulation of single strand break repair","type":"exact"},{"name":"up-regulation of single strand break repair","type":"exact"},{"name":"upregulation of single strand break repair","type":"exact"}],"termid":"GO:1903518"}


id: GO:2000508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"}


id: GO:0017187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The gamma-carboxylation of peptidyl-glutamic acid; catalyzed by the vitamin K dependent gamma-glutamyl carboxylase.","definition_xrefs":["RESID:AA0032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid carboxylation","termid":"GO:0017187"}


id: FYPO:0004537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle spindle assembly checkpoint signaling does not occur. As a result, the septation initiation network (SIN) signaling pathway is activated despite activation of the mitotic spindle assembly checkpoint (SAC). Normally, under conditions that activate the SAC, SIN activation is inhibited and the cell cycle arrests in anaphase. In this phenotype, premature SIN activation leads to premature cytokinesis and the formation of cut cells.","definition_xrefs":["PomBase:mah","PMID:11952833","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_output","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abolished response to mitotic cell cycle checkpoint signaling","termid":"FYPO:0002518"},{"relation_name":"is_a","term_name":"abnormal response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"FYPO:0004536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitotic spindle assembly checkpoint override","synonyms":[{"name":"SIN activation in presence of active mitotic SAC","type":"exact"},{"name":"abolished response to mitotic cell cycle spindle assembly checkpoint signaling","type":"exact"},{"name":"mitotic SAC override","type":"exact"},{"name":"mitotic cell cycle spindle assembly checkpoint override","type":"exact"},{"name":"septation initiation signaling activation in presence of active mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0004537"}


id: PBO:0030943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_depolymerization","termid":"PBO:0030943"}


id: GO:0002514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in B cells.","definition_xrefs":["ISBN:0781735149","PMID:16460922","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell tolerance induction","synonyms":[{"name":"B lymphocyte tolerance induction","type":"exact"},{"name":"B-cell tolerance induction","type":"exact"},{"name":"B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002514"}


id: PBO:0064421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepronociceptin","termid":"PBO:0064421"}


id: PBO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0000933"}


id: GO:0120213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of histidine biosynthetic process","synonyms":[{"name":"regulation of histidine anabolism","type":"exact"},{"name":"regulation of histidine biosynthesis","type":"exact"},{"name":"regulation of histidine formation","type":"exact"},{"name":"regulation of histidine synthesis","type":"exact"}],"termid":"GO:0120213"}


id: PATO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000593 absolute volume value (obsolete PATO:0000593)","termid":"PATO:0000593"}


id: PR:Q9UU79
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein NSA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05060","PANTHER:PTHR12642:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.08","secondary_identifiers":["UniProtKB:Q9UU79"],"synonyms":[{"name":"Spom972h-NSA2","type":"exact"}],"termid":"PR:Q9UU79"}


id: PBO:0039232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 1","termid":"PBO:0039232"}


id: PR:Q9USN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC132.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USN6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C132.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC132.03","synonyms":[{"name":"Spom972h-SPCC132.03","type":"exact"}],"termid":"PR:Q9USN6"}


id: GO:0043291
data:
  {"annotated_genes":["SJAG_00301","SJAG_04454","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72640,105437,105584],"is_not":false,"summary":null,"term":"GO:0043291"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that in Saccharomyces is composed of three subunits, Rav1p, Rav2p and Skp1p. Acts transiently to catalyze assembly of cytoplasmic V1, with membrane embedded V0 to form the V-ATPase holoenzyme.","definition_xrefs":["PMID:11283612","PMID:11844802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_03219":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"RAVE complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulator of the (H+)-ATPase of the vacuolar and endosomal membranes","type":"broad"}],"termid":"GO:0043291","terms_by_termid":{"GO:0043291":null}}


id: PATO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000528 drug insensitive (obsolete PATO:0000528)","termid":"PATO:0000528"}


id: PBO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lysine methyltransferase Set11","termid":"PBO:0005666"}


id: FYPO:0002384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at positions 5, 8, 12 and 16 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:23851719"],"gene_count":0,"genotype_count":0,"name":"obsolete increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during vegetative growth (obsolete FYPO:0002384)","synonyms":[{"name":"increased histone H4 acetylation (K5, K8, K12 and K16) at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5, H4-K8, H4-K12 and H4-K16 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4-K5/8/12/16 acetylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased histone H4K5, H4K8, H4K12 and H4K16 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002384"}


id: PBO:0078236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 18","termid":"PBO:0078236"}


id: GO:0035459
data:
  {"annotated_genes":["SJAG_02349","SJAG_02539","SJAG_03558","SJAG_03153","SJAG_05345","SJAG_05344","SJAG_00072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75853,74899,74521,74168,71512,77282,75466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The formation of a macromolecular complex between the coat proteins and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:bf","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vesicle cargo loading","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"cargo loading into vesicle","type":"exact"},{"name":"cargo selection","type":"exact"}],"termid":"GO:0035459","terms_by_termid":{"GO:0090110":null}}


id: GO:0014714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, taking place in the head, whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in head","termid":"GO:0014714"}


id: GO:0047537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminohexanoate + 2-oxoglutarate = 2-oxohexanoate + L-glutamate.","definition_xrefs":["EC:2.6.1.67","MetaCyc:2-AMINOHEXANOATE-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016769","GO:0003674"],"is_obsolete":false,"name":"2-aminohexanoate transaminase activity","secondary_identifiers":["RHEA:23600"],"synonyms":[{"name":"2-aminohexanoate aminotransferase activity","type":"exact"},{"name":"L-2-aminohexanoate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"leucine L-norleucine: 2-oxoglutarate aminotransferase activity","type":"related"},{"name":"norleucine (leucine) aminotransferase activity","type":"related"},{"name":"norleucine aminotransferase activity","type":"related"},{"name":"norleucine transaminase activity","type":"related"}],"termid":"GO:0047537"}


id: FYPO:0003231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at HOODs during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003231"}


id: MOD:01659
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonate, Uniblue A.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uniblue A derivatized residue","synonyms":[{"name":"1-amino-4-{[3-(ethenylsulfonyl)phenyl]amino}-9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"1-amino-9,10-dioxo-4-{[3-(vinylsulfonyl)phenyl]amino}-9,10-dihydroanthracene-2-sulfonic acid","type":"exact"},{"name":"Uniblue A","type":"exact"},{"name":"UniblueARes","type":"exact"}],"termid":"MOD:01659"}


id: PBO:0046256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 5","termid":"PBO:0046256"}


id: PATO:0001338
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in a population of multiple sexes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"population quality","termid":"PATO:0002003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed sex","termid":"PATO:0001338"}


id: GO:0030581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a symbiont's proteins within a cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"symbiont intracellular protein transport in host","secondary_identifiers":["GO:0051708"],"synonyms":[{"name":"host cell protein transport","type":"exact"},{"name":"intracellular protein transport in host","type":"exact"},{"name":"intracellular protein transport in other organism during symbiotic interaction","type":"broad"},{"name":"intracellular protein transport in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0030581"}


id: GO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly.","definition_xrefs":["GOC:cilia","Reactome:R-HSA-5620924.2","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0044085"],"is_obsolete":false,"name":"intraciliary transport involved in cilium assembly","synonyms":[{"name":"intraciliary transport involved in cilium morphogenesis","type":"related"},{"name":"intraflagellar transport","type":"broad"},{"name":"intraflagellar transport involved in cilium morphogenesis","type":"related"}],"termid":"GO:0035735"}


id: FYPO:0004399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5720.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on KT5720","synonyms":[{"name":"normal cell population growth in presence of KT5720","type":"exact"},{"name":"normal cell population growth on KT5720","type":"exact"},{"name":"normal cellular response to KT5720","type":"related"},{"name":"normal vegetative cell population growth on KT5720","type":"exact"}],"termid":"FYPO:0004399"}


id: PATO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anvil","synonyms":[{"name":"anvil shaped","type":"exact"}],"termid":"PATO:0002386"}


id: PBO:0082479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization","termid":"PBO:0082479"}


id: GO:1901616
data:
  {"annotated_genes":["SJAG_03786","SJAG_04320","SJAG_04192","SJAG_00244","SJAG_04048","SJAG_04954","SJAG_00237","SJAG_04870","SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[96328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006068"},{"annotations":[71975,77434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[84349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[110197,84454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[78776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[95479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"},{"annotations":[72835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_03786":null,"SJAG_03804":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organic hydroxy compound catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616","terms_by_termid":{"GO:0006062":null,"GO:0006068":null,"GO:0016095":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null,"GO:0071545":null,"GO:1903457":null}}


id: PBO:0027917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_myriocin","termid":"PBO:0027917"}


id: GO:0036260
data:
  {"annotated_genes":["SJAG_04034","SJAG_04488","SJAG_01724","SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[74757,111858,78173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59765],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which a cap structure is added to the 5' end of nascent RNA polymerase transcripts. Examples of RNA capping include 7-methyl-G caps found on all RNA polymerase II transcripts and nucleotide-containing cofactor caps, such as NAD(H) or FAD, found on bacterial trancripts.","definition_xrefs":["PMID:30353673","GOC:krc","PMID:27383794","GOC:mah","PMID:18775984","PMID:29681497","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_03901":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA capping","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"termid":"GO:0036260","terms_by_termid":{"GO:0006370":null,"GO:0036261":null,"GO:0106005":null}}


id: GO:0140333
data:
  {"annotated_genes":["SJAG_01945","SJAG_05209","SJAG_02897","SJAG_01731","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[90014,93456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[94957,90016,107711,93458,95663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[94958,107713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of a glycerophospholipid from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:26212235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02897":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"glycerophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycerophospholipid flippase activity (exoplasmic to cytosolic leaftlet)","type":"exact"}],"termid":"GO:0140333","terms_by_termid":{"GO:0090555":null,"GO:0140345":null,"GO:0140346":null,"GO:0180013":null}}


id: PATO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark brown","termid":"PATO:0001245"}


id: PBO:0058787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7156","termid":"PBO:0058787"}


id: GO:0033439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACA codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033439"}


id: FYPO:0006094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filament bundles is abnormal.","definition_xrefs":["GO:0061572","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal actin filament bundle organization","termid":"FYPO:0005979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin filament bundle assembly","synonyms":[{"name":"abnormal actin bundling","type":"exact"},{"name":"abnormal actin filament bundle assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament bundle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0006094"}


id: PBO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific Coiled-coil Protein","termid":"PBO:0000472"}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29086764","PMID:29230098","PMID:29182528","PMID:29576969","PMID:29626935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: PBO:0075905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA5 divergent transcript","termid":"PBO:0075905"}


id: PBO:0066014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor activity modifying protein 1","termid":"PBO:0066014"}


id: GO:0110134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biological process that results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to gametes. In the absence of meiotic drive, the two copies of each gene or chromosome in a diploid organism are transmitted to offspring with equal probability, whereas meiotic drive results in overrepresentation of the driving allele among the surviving products of meiosis.","definition_xrefs":["GOC:mah","PMID:29499907","PMID:26920473","PMID:29322557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":0,"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic drive","termid":"GO:0110134"}


id: GO:1990067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of DNA recombination occurring within a single chromosome.","definition_xrefs":["PMID:7748165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"intrachromosomal DNA recombination","synonyms":[{"name":"intrastrand DNA recombination","type":"exact"}],"termid":"GO:1990067"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: GO:1900918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of octadecene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of olefin metabolic process","termid":"GO:1900909"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"negatively_regulates","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of octadecene metabolic process","synonyms":[{"name":"down regulation of octadecene metabolic process","type":"exact"},{"name":"down regulation of octadecene metabolism","type":"related"},{"name":"down-regulation of octadecene metabolic process","type":"exact"},{"name":"down-regulation of octadecene metabolism","type":"related"},{"name":"downregulation of octadecene metabolic process","type":"exact"},{"name":"downregulation of octadecene metabolism","type":"related"},{"name":"inhibition of octadecene metabolic process","type":"narrow"},{"name":"inhibition of octadecene metabolism","type":"narrow"},{"name":"negative regulation of octadecene metabolism","type":"related"}],"termid":"GO:1900918"}


id: PBO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 3","termid":"PBO:0070825"}


id: PBO:0047667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKTN antisense RNA 1","termid":"PBO:0047667"}


id: PBO:0087905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium","termid":"PBO:0087905"}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0049816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 8","termid":"PBO:0049816"}


id: PBO:0030289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_glycerol_carbon_source","termid":"PBO:0030289"}


id: SO:0000836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of an mRNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature_transcript_region","termid":"SO:0000834"},{"relation_name":"part_of","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_region","synonyms":[{"name":"mRNA region","type":"exact"}],"termid":"SO:0000836"}


id: PBO:0086003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YKR075C has a paralog, YOR062C, that arose from the whole genome duplication","termid":"PBO:0086003"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["EC:3.5.1.76","MetaCyc:3.5.1.76-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: PBO:0052905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-2","termid":"PBO:0052905"}


id: PBO:0057786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3074","termid":"PBO:0057786"}


id: GO:0045627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T-helper cell differentiation","termid":"GO:0045624"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell differentiation","termid":"GO:0045625"},{"relation_name":"positively_regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of T-helper 1 cell differentiation","synonyms":[{"name":"activation of T-helper 1 cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper 1 cell development","type":"related"},{"name":"stimulation of T-helper 1 cell differentiation","type":"narrow"},{"name":"up regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"up-regulation of T-helper 1 cell differentiation","type":"exact"},{"name":"upregulation of T-helper 1 cell differentiation","type":"exact"}],"termid":"GO:0045627"}


id: PBO:0064760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase D","termid":"PBO:0064760"}


id: GO:0070788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the conidiophore stalk over time, from its formation to the mature structure. The conidiophore stalk is part of a specialized hypha that extends aerially from the growth substrate and supports structures from which conidia, or asexual spores, develop.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidiophore stalk development","termid":"GO:0070788"}


id: PBO:0085923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0085923"}


id: PBO:0085317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase; required for efficient mating and response to osmotic shock; physically associates with and regulated by Vac14p; contains a SAC1-like domain; homologous to human FIG4, which is associated with CMT4J, a form of Charcot-Marie-Tooth disorder","termid":"PBO:0085317"}


id: RO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x 'has habitat' y if and only if: x is an organism, y is a habitat, and y can sustain and allow the growth of a population of xs.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_habitat","termid":"RO:0002303"}


id: GO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adenylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-histidine adenylylation","termid":"GO:0051111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine adenylylation, to form peptidyl-1'-(phospho-5'-adenosine)-L-histidine","termid":"GO:0051112"}


id: PBO:0049048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 39","termid":"PBO:0049048"}


id: PBO:0056732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 1","termid":"PBO:0056732"}


id: PBO:0047569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 20","termid":"PBO:0047569"}


id: PR:P41005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mes1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mes1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.08c","synonyms":[{"name":"Spom972h-mes1","type":"exact"}],"termid":"PR:P41005"}


id: PBO:0068911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 154, pseudogene","termid":"PBO:0068911"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["RESID:AA0543","PubMed:9461080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: GO:0004553
data:
  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id: GO:0016512
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id: GO:0060847
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id: GO:0017183
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id: FYPO:0005859
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id: PBO:0059568
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id: PBO:0089585
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing","termid":"PBO:0089585"}


id: PBO:0068390
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 208","termid":"PBO:0068390"}


id: PBO:0040801
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id: PBO:0044827
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 114","termid":"PBO:0044827"}


id: PBO:0002216
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