# terms

id: GO:0070697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an activin receptor.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"activin receptor binding","termid":"GO:0070697"}


id: GO:1901491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:20133819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of lymphangiogenesis","termid":"GO:1901490"},{"relation_name":"negatively_regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphangiogenesis","synonyms":[{"name":"down regulation of lymph vessel formation","type":"exact"},{"name":"down regulation of lymphangiogenesis","type":"exact"},{"name":"down-regulation of lymph vessel formation","type":"exact"},{"name":"down-regulation of lymphangiogenesis","type":"exact"},{"name":"downregulation of lymph vessel formation","type":"exact"},{"name":"downregulation of lymphangiogenesis","type":"exact"},{"name":"inhibition of lymph vessel formation","type":"narrow"},{"name":"inhibition of lymphangiogenesis","type":"narrow"},{"name":"negative regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901491"}


id: PBO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0000703"}


id: GO:0070001
data:
  {"annotated_genes":["SJAG_00784","SJAG_00254","SJAG_01968","SJAG_04583","SJAG_03420","SJAG_03763","SJAG_02260","SJAG_00109"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"},{"annotations":[60089,71800,75219,78480,93915,72912,70232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004190"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00109":null,"SJAG_00254":null,"SJAG_00784":null,"SJAG_01968":null,"SJAG_02260":null,"SJAG_03420":null,"SJAG_03763":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"aspartic-type peptidase activity","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070001","terms_by_termid":{"GO:0004190":null,"GO:0042500":null}}


id: GO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a larval (immature) organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval locomotory behavior","synonyms":[{"name":"larval locomotory behaviour","type":"exact"}],"termid":"GO:0008345"}


id: MOD:02027
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a URM1 protein.","definition_xrefs":["PubMed:21209336","PubMed:10713047"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"urmylated lysine","termid":"MOD:02027"}


id: PBO:0067843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 145","termid":"PBO:0067843"}


id: PBO:0025432
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorders","termid":"PBO:0025432"}


id: PR:Q10184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.09","synonyms":[{"name":"5-proFAR isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC3F10.09","type":"exact"},{"name":"phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10184"}


id: PBO:0067572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 727, pseudogene","termid":"PBO:0067572"}


id: FYPO:0007466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation","synonyms":[{"name":"abnormal histone H3 K9 methylation","type":"exact"},{"name":"abnormal histone H3K9me","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation","type":"exact"}],"termid":"FYPO:0007466"}


id: FYPO:0007619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to chromatin during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin during oxidative stress response","type":"exact"}],"termid":"FYPO:0007619"}


id: PBO:0072522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 51","termid":"PBO:0072522"}


id: PBO:0087348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingolipid alpha-hydroxylase; functions in the alpha-hydroxylation of sphingolipid-associated very long chain fatty acids, has both cytochrome b5-like and hydroxylase/desaturase domains, not essential for growth","termid":"PBO:0087348"}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["CL:0000451","PMID:18469816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3beta-hydroxysteroid-4alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase/C4-decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: PBO:0080833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 1","termid":"PBO:0080833"}


id: GO:0046006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell proliferation","synonyms":[{"name":"regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"regulation of activated T-cell proliferation","type":"exact"},{"name":"regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046006"}


id: FYPO:0006147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during a cellular response to copper ion starvation during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:al","PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006147"}


id: PBO:0004770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Ctf1","termid":"PBO:0004770"}


id: GO:0010870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency or rate of receptor biosynthesis. Receptor biosynthesis is the collection of chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor biosynthetic process (obsolete GO:0010870)","termid":"GO:0010870"}


id: GO:0043007
data:
  {"annotated_genes":["SJAG_01050","SJAG_05237","SJAG_05180","SJAG_04855","SJAG_03898","SJAG_03997","SJAG_00247","SJAG_04816","SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70451,91568,94777,96630,99816],"is_not":false,"summary":null,"term":"GO:0043007"},{"annotations":[98630],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[97703,110174,94852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"}]},"cv_name":"biological_process","definition":"Any process involved in sustaining the fidelity and copy number of rDNA repeats.","definition_xrefs":["GOC:vw","PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of DNA repeat elements","termid":"GO:0043570"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01050":null,"SJAG_03898":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04816":null,"SJAG_04855":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"maintenance of rDNA","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"rDNA maintenance","type":"exact"},{"name":"ribosomal DNA maintenance","type":"exact"}],"termid":"GO:0043007","terms_by_termid":{"GO:0031582":null,"GO:0043007":null,"GO:1902681":null}}


id: FYPO:0002021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex (rather than concentrated at the cell ends as in wild type cells).","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches during vegetative growth","termid":"FYPO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during vegetative growth","synonyms":[{"name":"delocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"delocalized actin cortical patches during vegetative growth","type":"exact"},{"name":"depolarized actin cortical patch localization during vegetative growth","type":"exact"},{"name":"dispersed F-actin patch localization during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"dispersed actin cortical patch location during vegetative growth","type":"related"},{"name":"dispersed actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002021"}


id: PBO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-1","termid":"PBO:0001687"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: PBO:0051130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-26","termid":"PBO:0051130"}


id: GO:0031764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 1 galanin receptor binding","synonyms":[{"name":"type 1 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031764"}


id: PBO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-5","termid":"PBO:0052922"}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: GO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"blastocyst formation","termid":"GO:0001825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell differentiation","termid":"GO:0001826"}


id: PBO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-67-1 (pseudogene)","termid":"PBO:0051245"}


id: GO:1903817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["GO_REF:0000059","PMID:19219384","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of voltage-gated potassium channel activity","synonyms":[{"name":"down regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903817"}


id: GO:0102823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol-3-rhamnoside = kaempferol 3-O-rhamnoside-7-O-glucoside + UDP.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"kaempferol-3-rhamnoside-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8266"],"termid":"GO:0102823"}


id: GO:2000280
data:
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id: GO:1900317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltopentaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maltopentaose transport","termid":"GO:1900315"},{"relation_name":"is_a","term_name":"positive regulation of pentasaccharide transport","termid":"GO:1900362"},{"relation_name":"positively_regulates","term_name":"maltopentaose transport","termid":"GO:2001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltopentaose transport","synonyms":[{"name":"activation of maltopentaose transport","type":"narrow"},{"name":"up regulation of maltopentaose transport","type":"exact"},{"name":"up-regulation of maltopentaose transport","type":"exact"},{"name":"upregulation of maltopentaose transport","type":"exact"}],"termid":"GO:1900317"}


id: PBO:0063469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 subunit alpha 2","termid":"PBO:0063469"}


id: PBO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repressor of RNA polymerase III Maf1","termid":"PBO:0001836"}


id: GO:0050664
data:
  {"annotated_genes":["SJAG_03098","SJAG_05033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77832,77974],"is_not":false,"summary":null,"term":"GO:0050664"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["EC:1.6.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor","type":"related"}],"termid":"GO:0050664","terms_by_termid":{"GO:0050664":null}}


id: GO:0003073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the force with which blood travels through the systemic arterial circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}


id: FYPO:0003003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to kinetochore during vegetative growth","synonyms":[{"name":"increased protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"increased protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003003"}


id: PBO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C12","termid":"PBO:0050512"}


id: PBO:0065403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA5 pseudogene 1","termid":"PBO:0065403"}


id: PBO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin","termid":"PBO:0004080"}


id: PBO:0029325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA","termid":"PBO:0029325"}


id: GO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"seed coat development","termid":"GO:0010214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage metabolic process involved in seed coat development","synonyms":[{"name":"mucilage metabolic process during seed coat development","type":"related"},{"name":"mucilage metabolism during seed coat development","type":"exact"}],"termid":"GO:0048359"}


id: GO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKK activity (obsolete GO:0051389)","synonyms":[{"name":"inactivation of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAPKK activity","type":"exact"}],"termid":"GO:0051389"}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["GOC:jl","PMID:11052265","PMID:12766758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: PBO:0087536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins to influence multiple processes such as cell cycle progression, heat-shock resistance, mating, sporulation, telomeric silencing and early stages of mitophagy; orthologous to human NAA15; expression of both human NAA10 and NAA15 functionally complements ard1 nat1 double mutant although single mutations are not complemented by their orthologs","termid":"PBO:0087536"}


id: GO:0141146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of a host tissue. This can occur via the disruption of the extracellular matrix, or the detachment of cells from the extracellular matrix, or the dissociation of the cells composing that tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:14651638","PMID:11982763","PMID:26355030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host tissue","synonyms":[{"name":"cytopathogenic effect","type":"related"}],"termid":"GO:0141146"}


id: GO:0061307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac neural crest cell that will migrate to the heart and contribute to its development. Cardiac neural crest cells are specialized cells that migrate toward the heart from the third, fourth and sixth pharyngeal arches.","definition_xrefs":["GOC:mtg_heart","GOC:dph","PMID:19705442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell differentiation","termid":"GO:0014033"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}


id: GO:0032297
data:
  {"annotated_genes":["SJAG_01210","SJAG_03048","SJAG_02162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93294,97797,104194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of initiation of DNA-dependent DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"},{"relation_name":"negatively_regulates","term_name":"DNA replication initiation","termid":"GO:0006270"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01210":null,"SJAG_02162":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"negative regulation of DNA-templated DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA replication initiation","type":"exact"},{"name":"down-regulation of DNA replication initiation","type":"exact"},{"name":"downregulation of DNA replication initiation","type":"exact"},{"name":"inhibition of DNA replication initiation","type":"narrow"},{"name":"negative regulation of DNA replication initiation","type":"broad"},{"name":"negative regulation of DNA-dependent DNA replication initiation","type":"exact"}],"termid":"GO:0032297","terms_by_termid":{"GO:1903467":null}}


id: GO:0018993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in an organism's soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sex determination","termid":"GO:0018993"}


id: GO:0044206
data:
  {"annotated_genes":["SJAG_04713","SJAG_04709","SJAG_04354","SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83233,84201,87599,88569,110072],"is_not":false,"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces UMP, uridine monophosphate, from derivatives of it (e.g. cytidine, uridine, cytosine) without de novo synthesis.","definition_xrefs":["GOC:ecd","PMID:15096496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP biosynthetic process","termid":"GO:0006222"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide salvage","termid":"GO:0010138"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"UMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UMP biosynthesis via nucleoside salvage pathway","type":"exact"},{"name":"UMP biosynthetic process via nucleoside salvage pathway","type":"exact"}],"termid":"GO:0044206","terms_by_termid":{"GO:0044206":null}}


id: PBO:0028998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0028998"}


id: PBO:0081869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 808","termid":"PBO:0081869"}


id: PBO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H quinone dehydrogenase 1","termid":"PBO:0061423"}


id: PATO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having triangular faces that meet at a common point and containing a polygonal shaped base.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyramidal","termid":"PATO:0002336"}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: PBO:0085000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 family E3 ubiquitin ligase; regulates processes including: MVB sorting, the heat shock response, transcription, endocytosis and ribosome stability; ubiquitinates Sec23p, Sna3p, Ste4p, Nfi1p, Rpo21p, Sem1p, Dip5p and Put4p; autoubiquitinates; deubiquitinated by Ubp2p; regulated by SUMO ligase Siz1p, in turn regulates Siz1p SUMO ligase activity; required for efficient Golgi-to-ER trafficking in COPI mutants; mutant tolerates aneuploidy; human homolog implicated in Liddle syndrome","termid":"PBO:0085000"}


id: PBO:0071609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 27","termid":"PBO:0071609"}


id: PBO:0082961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin patch assembly","termid":"PBO:0082961"}


id: SO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_bipartite_deficiency","synonyms":[{"name":"inversion derived bipartite deficiency","type":"exact"}],"termid":"SO:0000461"}


id: PBO:0054410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1806","termid":"PBO:0054410"}


id: PBO:0090294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa1","termid":"PBO:0090294"}


id: PBO:0039483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A6, pseudogene","termid":"PBO:0039483"}


id: SO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A partial DNA sequence assembly of a chromosome or full genome, which contains gaps that are filled with N's.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_genomic_sequence_assembly","synonyms":[{"name":"partial genomic sequence assembly","type":"exact"},{"name":"pseudomolecule","type":"broad"},{"name":"sequence assembly with N-gaps","type":"exact"}],"termid":"SO:0001876"}


id: GO:0047526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vestitone + NADP+ = 2'-hydroxyformononetin + NADPH + H+.","definition_xrefs":["RHEA:22560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2'-hydroxyisoflavone reductase activity","secondary_identifiers":["MetaCyc:RXN-3562","EC:1.3.1.45"],"synonyms":[{"name":"2',7-dihydroxy-4',5'-methylenedioxyisoflavone reductase activity","type":"related"},{"name":"NADPH:2'-hydroxyisoflavone oxidoreductase activity","type":"related"},{"name":"isoflavone reductase activity","type":"related"},{"name":"vestitone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047526"}


id: GO:0140881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of the fungal metabolite terrein.","definition_xrefs":["PMID:24816227","PMID:25852654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"terrein biosynthetic process","termid":"GO:0140880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation terrein biosynthetic process","termid":"GO:0140881"}


id: PBO:0091515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein UBiquitin ligase","termid":"PBO:0091515"}


id: PBO:0004591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18 (predicted)","termid":"PBO:0004591"}


id: GO:0097258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 20-hydroxy-leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-oxo-leukotriene B4 + H+ + 2 H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:9675028","GOC:mw","RHEA:48668","PMID:2836406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"20-hydroxy-leukotriene B4 omega oxidase activity","secondary_identifiers":["Reactome:R-HSA-2161745"],"synonyms":[{"name":"20-hydroxy-leukotriene B4 omega-oxidase activity","type":"exact"},{"name":"20-hydroxy-leukotriene B4 omega-oxidation","type":"related"}],"termid":"GO:0097258"}


id: PBO:0055062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2478","termid":"PBO:0055062"}


id: PBO:0057696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-1","termid":"PBO:0057696"}


id: PBO:0087877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p","termid":"PBO:0087877"}


id: PBO:0043222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 1","termid":"PBO:0043222"}


id: PBO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Cuf1","termid":"PBO:0002152"}


id: PBO:0066259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 2","termid":"PBO:0066259"}


id: PBO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 divergent transcript","termid":"PBO:0044160"}


id: PBO:0029221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0029221"}


id: GO:0014717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell activation. The satellite cell activation is the process that initiates satellite cell division by causing it to move from quiescence to the G1 stage of the cell cycle. The cell swells and there are a number of other small changes. The cells then start to divide. Following cell division the cells will differentiate.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue regeneration","termid":"GO:0043416"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of satellite cell activation involved in skeletal muscle regeneration","termid":"GO:0014717"}


id: GO:0004476
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76861],"is_not":false,"summary":null,"term":"GO:0004476"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["EC:5.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mannose-6-phosphate isomerase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-532549","Reactome:R-HSA-3781832","RHEA:12356","MetaCyc:MANNPISOM-RXN"],"synonyms":[{"name":"D-mannose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"mannose phosphate isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphomannoisomerase activity","type":"related"},{"name":"phosphomannose isomerase activity","type":"related"}],"termid":"GO:0004476","terms_by_termid":{"GO:0004476":null}}


id: GO:0061239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephronin the mesonephros. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in mesonephric nephron morphogenesis","termid":"GO:0061239"}


id: GO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:20005821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of astrocyte differentiation","termid":"GO:0048712"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of astrocyte activation","termid":"GO:0061888"},{"relation_name":"is_a","term_name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"},{"relation_name":"negatively_regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte activation","termid":"GO:0061889"}


id: GO:0051262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"protein tetramerization","synonyms":[{"name":"protein tetramer assembly","type":"exact"},{"name":"protein tetramer biosynthesis","type":"exact"},{"name":"protein tetramer biosynthetic process","type":"exact"},{"name":"protein tetramer formation","type":"exact"}],"termid":"GO:0051262"}


id: GO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine-rich G-protein receptor-like receptor activity (obsolete GO:0001627)","synonyms":[{"name":"LGR-like receptor","type":"exact"},{"name":"leucine-rich G protein receptor-like receptor activity","type":"exact"},{"name":"leucine-rich G-protein receptor-like receptor activity","type":"exact"}],"termid":"GO:0001627"}


id: PBO:0062479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily K member 1 pseudogene","termid":"PBO:0062479"}


id: PBO:0091741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, paralog of SPNCRNA.118","termid":"PBO:0091741"}


id: PBO:0027804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_JM216","termid":"PBO:0027804"}


id: PBO:0082027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase; has similarity to Gas1p; localizes to the cell wall","termid":"PBO:0082027"}


id: PBO:0044111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 70","termid":"PBO:0044111"}


id: PBO:0042347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD82 antisense RNA 1","termid":"PBO:0042347"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perturbation of signal transduction in another organism","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: PBO:0027759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_meiotic_cell_cycle","termid":"PBO:0027759"}


id: GO:1903562
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96892],"is_not":false,"summary":null,"term":"GO:1903562"}]},"cv_name":"biological_process","definition":"Any microtubule bundle formation that is involved in spindle midzone assembly involved in mitosis.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15647375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle formation","termid":"GO:0001578"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"},{"relation_name":"part_of","term_name":"mitotic spindle midzone assembly","termid":"GO:0051256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0000226","GO:0008150","GO:0007010","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"microtubule bundle formation involved in mitotic spindle midzone assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundle formation involved in mitotic spindle midzone formation","type":"exact"},{"name":"microtubule bundle formation involved in spindle midzone assembly involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in mitotic spindle midzone assembly","type":"related"},{"name":"microtubule bundling involved in mitotic spindle midzone formation","type":"exact"},{"name":"microtubule bundling involved in spindle midzone assembly involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in spindle midzone biogenesis involved in mitosis","type":"exact"},{"name":"microtubule bundling involved in spindle midzone formation involved in mitosis","type":"exact"}],"termid":"GO:1903562","terms_by_termid":{"GO:1903562":null}}


id: PBO:0027285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027285"}


id: GO:0071622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of granulocyte chemotaxis. Granulocyte chemotaxis is the movement of a granulocyte in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"granulocyte chemotaxis","termid":"GO:0071621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"}


id: PBO:0004267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp9","termid":"PBO:0004267"}


id: GO:0010729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of hydrogen peroxide biosynthesis. The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide biosynthetic process","termid":"GO:0010728"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species biosynthetic process","termid":"GO:1903428"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide biosynthetic process","termid":"GO:0050665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide biosynthetic process","synonyms":[{"name":"positive regulation of hydrogen peroxide biosynthesis","type":"exact"}],"termid":"GO:0010729"}


id: MOD:01560
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01560"}


id: PBO:0049620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 23","termid":"PBO:0049620"}


id: GO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + L-ornithine = H2O + L-glutamate + 3,4-dihydro-2H-pyrrole-2-carboxylate.","definition_xrefs":["MetaCyc:ORNITHINELYSINE-AMINOTRANSFERASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete ornithine(lysine) transaminase activity (obsolete GO:0050155)","synonyms":[{"name":"L-ornithine(L-lysine):2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"L-ornithine:2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"lysine/ornithine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"ornithine(lysine) aminotransferase activity","type":"exact"}],"termid":"GO:0050155"}


id: FYPO:0005453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene does not occur.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"break-induced loss of heterozygosity via chromosomal translocation abolished","type":"exact"}],"termid":"FYPO:0005453"}


id: PBO:0074531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA E","termid":"PBO:0074531"}


id: PBO:0070655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 26","termid":"PBO:0070655"}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: PBO:0003880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 ortholog (predicted)","termid":"PBO:0003880"}


id: GO:0102229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: n H2O + an exposed unphosphorylated, unbranched malto-oligosaccharide tail on amylopectin = amylopectin + maltose.","definition_xrefs":["EC:3.2.1.2","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"amylopectin maltohydrolase activity","secondary_identifiers":["MetaCyc:RXN-12278"],"termid":"GO:0102229"}


id: PBO:0042851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 61","termid":"PBO:0042851"}


id: GO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type I receptor (obsolete GO:0008259)","synonyms":[{"name":"TGF-beta ligand binding to type I receptor","type":"exact"},{"name":"TGFbeta ligand binding to type I receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"exact"}],"termid":"GO:0008259"}


id: PBO:0067469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 598, pseudogene","termid":"PBO:0067469"}


id: GO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C3d product of the complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C3d receptor activity","termid":"GO:0001860"}


id: PBO:0043195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2 pseudogene 1","termid":"PBO:0043195"}


id: GO:0050509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP.","definition_xrefs":["MetaCyc:2.4.1.225-RXN","EC:2.4.1.225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3656267","Reactome:R-HSA-9036285","Reactome:R-HSA-9036289","RHEA:20908","Reactome:R-HSA-3656257","Reactome:R-HSA-2022856","Reactome:R-HSA-2076392"],"synonyms":[{"name":"N-acetylglucosaminyl-proteoglycan 4-b-glucuronosyltransferase activity","type":"exact"},{"name":"N-acetylglucosaminylproteoglycan beta-1,4-glucuronyltransferase activity","type":"related"},{"name":"UDP-alpha-D-glucuronate:N-acetyl-alpha-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-proteoglycan 4-beta-glucuronosyltransferase activity","type":"related"},{"name":"heparan glucuronyltransferase II activity","type":"related"}],"termid":"GO:0050509"}


id: FYPO:0003134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal during a cellular response to calcium starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall alpha-glucan level","termid":"FYPO:0001084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002946","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation","synonyms":[{"name":"increased cell wall alpha-D-glucan level during cellular response to calcium starvation","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation during cellular response to calcium starvation","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003134"}


id: PBO:0080940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zonadhesin","termid":"PBO:0080940"}


id: PBO:0050724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 10","termid":"PBO:0050724"}


id: FYECO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium arsenite (NaAsO2) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NaAsO2","synonyms":[{"name":"sodium arsenite added","type":"exact"}],"termid":"FYECO:0000297"}


id: PBO:0072542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 72","termid":"PBO:0072542"}


id: PBO:0066195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM14-RBM4 readthrough","termid":"PBO:0066195"}


id: PBO:0050180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA reductase","termid":"PBO:0050180"}


id: GO:0070794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of conidiophore development, a process that leads to the formation of a conidiophore. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"negatively_regulates","term_name":"conidiophore development","termid":"GO:0070787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of conidiophore development","termid":"GO:0070794"}


id: MOD:01944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"}


id: PBO:0002505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide methionine sulfoxide reductase (predicted)","termid":"PBO:0002505"}


id: FYPO:0003151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to heat is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to heat","synonyms":[{"name":"decreased protein accumulation during cellular response to heat","type":"related"},{"name":"decreased protein level during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to heat","type":"exact"},{"name":"thermo-sensitive","type":"related"},{"name":"thermosensitive","type":"related"}],"termid":"FYPO:0003151"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: FYPO:0007936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of  DNA breakpoint junctions is greater than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}


id: PBO:0034558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination","termid":"PBO:0034558"}


id: PBO:0041034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic charge Y-linked 2D, pseudogene","termid":"PBO:0041034"}


id: PBO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A","termid":"PBO:0042568"}


id: GO:0140026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissociation of the contractile vacuole after discharge, from the plasma membrane. This interaction is mediated by detethering factors that initiate the process of tubulation and fragmentation of the empty contractile vacuole bladder, which is then reincorporated into the CV network.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole dissociation from plasma membrane","synonyms":[{"name":"contractile vacuole detethering from plasma membrane","type":"exact"}],"termid":"GO:0140026"}


id: GO:0009554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.","definition_xrefs":["GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type sporogenesis","termid":"GO:0048236"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"megasporogenesis","synonyms":[{"name":"megaspore development","type":"exact"},{"name":"megaspore mother cell meiosis","type":"exact"},{"name":"meiosis of the megasporocyte","type":"exact"},{"name":"meiotic division of the megasporocyte","type":"exact"}],"termid":"GO:0009554"}


id: GO:0060830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Grouping of smoothened or patched receptors in a cilium, contributing to the smoothened signaling pathway.","definition_xrefs":["GOC:cilia","GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor clustering","termid":"GO:0043113"},{"relation_name":"part_of","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ciliary receptor clustering involved in smoothened signaling pathway","synonyms":[{"name":"ciliary receptor clustering involved in hedgehog signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in hh signaling pathway","type":"exact"},{"name":"ciliary receptor clustering involved in smoothened signalling pathway","type":"exact"}],"termid":"GO:0060830"}


id: MOD:00797
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-cysteine residue to the PEP adduct, 2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","definition_xrefs":["PubMed:7999765","ChEBI:149496","PubMed:8664284","RESID:AA0391","PubMed:4696757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","synonyms":[{"name":"(2R)-2-amino-3-[1-carboxy-1-(phosphonooxy)ethyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","type":"exact"},{"name":"2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-2-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-([(2R)-2-azanyl-2-carboxyethyl]sulfanyl)-2-(phosphonooxy)propanoic acid","type":"exact"},{"name":"MOD_RES 2-(S-cysteinyl)pyruvic acid O-phosphothioketal","type":"exact"},{"name":"S-[1-carboxy-1-(phosphonooxy)ethyl]cysteine","type":"exact"},{"name":"SPEPCys","type":"exact"},{"name":"cysteinyl pyruvate O-phosphothioketal","type":"exact"},{"name":"phosphoenolpyruvate cysteine adduct","type":"exact"},{"name":"phospholactoyl cysteine adduct","type":"exact"}],"termid":"MOD:00797"}


id: PBO:0068840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 78, pseudogene","termid":"PBO:0068840"}


id: GO:0033478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-L-rhamnose, a substance composed of rhamnose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["PMID:15134748","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-rhamnose metabolic process","secondary_identifiers":["MetaCyc:PWY-3261"],"synonyms":[{"name":"UDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0033478"}


id: GO:1990719
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C2 axonemal microtubule (also called C2 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["GOC:cilia","PMID:9295136","PMID:21586547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"C1 axonemal microtubule","synonyms":[{"name":"C1 tubule","type":"broad"}],"termid":"GO:1990719"}


id: FYPO:0004251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is greater than normal. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:20051983","PMID:24806966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased DNA resection during replication fork processing","synonyms":[{"name":"increased DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"increased DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"increased DNA resectioning during replication fork processing","type":"exact"},{"name":"increased extent of DNA resection during replication fork processing","type":"exact"},{"name":"increased extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0004251"}


id: PBO:0080350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 2 pseudogene","termid":"PBO:0080350"}


id: PBO:0003633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, meiotically spliced","termid":"PBO:0003633"}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucokinase activity","termid":"GO:0033131"},{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: PR:Q9UQW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.04c","secondary_identifiers":["UniProtKB:Q9UQW9"],"synonyms":[{"name":"ODC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ODC1","type":"exact"}],"termid":"PR:Q9UQW9"}


id: SO:1001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by sequence similarity data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_sequence_similarity_data","synonyms":[{"name":"CDS supported by sequence similarity data","type":"exact"}],"termid":"SO:1001251"}


id: _global:interaction_double_mutant_genotype
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_relations","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_double_mutant_genotype","termid":"_global:interaction_double_mutant_genotype"}


id: PBO:0109614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitic acid regulated anti-inflammatory lncRNA","termid":"PBO:0109614"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: GO:0008518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Folate derivative (out) + anion (in) = folate derivative (in) + anion (out). The Reduced Folate Carrier (RCF(SLC19A1) acts by an antiport mechanism. RCF carries several folate derivatives: MTX, PMX, ratitrexed, pralatrexate, 5-methyl THF, and 5-formyl THF.","definition_xrefs":["PMID:24745983","GOC:mtg_transport","TC:2.A.48","PMID:21568705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folate:monoatomic anion antiporter activity","synonyms":[{"name":"folate:anion antiporter activity","type":"broad"},{"name":"reduced folate carrier activity","type":"related"},{"name":"reduced folate transmembrane transporter activity","type":"related"},{"name":"reduced folate transporter","type":"related"}],"termid":"GO:0008518"}


id: PBO:0082694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatin remodeling complex; critical for INO80 function; involved in regulation of chromosome segregation and maintenance of normal centromeric chromatin structure; human ortholog INO80C is a member of the human INO80 complex; implicated in DNA repair based on genetic interactions with RAD52 epistasis genes","termid":"PBO:0082694"}


id: PBO:0011130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene","termid":"PBO:0011130"}


id: GO:0050709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"negative regulation of protein transport","termid":"GO:0051224"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein secretion","synonyms":[{"name":"down regulation of protein secretion","type":"exact"},{"name":"down-regulation of protein secretion","type":"exact"},{"name":"downregulation of protein secretion","type":"exact"},{"name":"inhibition of protein secretion","type":"narrow"}],"termid":"GO:0050709"}


id: PATO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000055 relative number (obsolete PATO:0000055)","termid":"PATO:0000055"}


id: GO:0048543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the phytochrome chromophore. The phytochrome chromophore is a linear tetrapyrrolic prosthetic group covalently attached to the large soluble protein phytochrome. Light absorption by the phytochrome chromophore triggers photoconversion between two spectrally distinct forms of the photoreceptor: Pr, the red light absorbing form, and Pfr, the far red light absorbing form.","definition_xrefs":["PMID:2909515","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochrome chromophore biosynthetic process","synonyms":[{"name":"phytochrome chromophore anabolism","type":"exact"},{"name":"phytochrome chromophore biosynthesis","type":"exact"},{"name":"phytochrome chromophore formation","type":"exact"},{"name":"phytochrome chromophore synthesis","type":"exact"}],"termid":"GO:0048543"}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: MOD:00927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of a residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:16335955","PubMed:3802193","Unimod:510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:00927"}


id: PBO:0079345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 29, pseudogene","termid":"PBO:0079345"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: PBO:0049915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM2 antisense RNA 1","termid":"PBO:0049915"}


id: GO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine.","definition_xrefs":["RESID:AA0259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phycoerythrobilin linkage","termid":"GO:0017011"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycoerythrobilin linkage via phycoerythrobilin-bis-L-cysteine","termid":"GO:0018167"}


id: PBO:0075684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor associated and regulated protein","termid":"PBO:0075684"}


id: PBO:0041931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 2","termid":"PBO:0041931"}


id: GO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid.","definition_xrefs":["EC:2.3.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-glutamyltransferase activity (obsolete GO:0003840)","secondary_identifiers":["KEGG_REACTION:R04159","MetaCyc:GAMMA-GLUTAMYLTRANSFERASE-RXN"],"synonyms":[{"name":"(5-L-glutamyl)-peptide:amino-acid 5-glutamyltransferase activity","type":"related"},{"name":"L-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"L-gamma-glutamyltransferase activity","type":"related"},{"name":"L-glutamyltransferase activity","type":"related"},{"name":"alpha-glutamyl transpeptidase activity","type":"related"},{"name":"gamma-GPT","type":"related"},{"name":"gamma-GT","type":"related"},{"name":"gamma-GTP","type":"related"},{"name":"gamma-glutamyl peptidyltransferase activity","type":"related"},{"name":"gamma-glutamyl transpeptidase activity","type":"related"},{"name":"glutamyl transpeptidase activity","type":"related"}],"termid":"GO:0003840"}


id: MOD:00521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:153","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex2HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(2)HexNAc(2)","type":"related"},{"name":"Hex2HexNAc2","type":"related"}],"termid":"MOD:00521"}


id: PBO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 25","termid":"PBO:0050247"}


id: PBO:0005503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific multicopy membrane protein family 1","termid":"PBO:0005503"}


id: GO:0046456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of icosanoids, any of a group of C20 polyunsaturated fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"icosanoid biosynthetic process","secondary_identifiers":["Wikipedia:Eicosanoid"],"synonyms":[{"name":"eicosanoid biosynthesis","type":"exact"},{"name":"eicosanoid biosynthetic process","type":"exact"},{"name":"eoxin biosynthesis","type":"exact"},{"name":"eoxin synthesis","type":"exact"},{"name":"icosanoid anabolism","type":"exact"},{"name":"icosanoid biosynthesis","type":"exact"},{"name":"icosanoid formation","type":"exact"},{"name":"icosanoid synthesis","type":"exact"}],"termid":"GO:0046456"}


id: PBO:0060515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase","termid":"PBO:0060515"}


id: MOD:00893
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 128.0-128.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"}


id: PBO:0053455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 407","termid":"PBO:0053455"}


id: GO:0032587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a ruffle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"ruffle","termid":"GO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"ruffle membrane","synonyms":[{"name":"membrane ruffle","type":"related"}],"termid":"GO:0032587"}


id: PBO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 2","termid":"PBO:0047639"}


id: PBO:0005540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase/inositol-1,4- bisphosphate 1-phosphatase","termid":"PBO:0005540"}


id: PBO:0089209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, middle-meiotic Cuf2","termid":"PBO:0089209"}


id: GO:0102945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose(2-) + soyasapogenol B = UDP(3-) + a soyasapogenol B monoglucoside.","definition_xrefs":["EC:2.4.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"soyasapogenol B UDP-glucosyl transferase activity","secondary_identifiers":["MetaCyc:RXN-9037"],"termid":"GO:0102945"}


id: SO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The coding exon that is most 3-prime on a given transcript.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon","synonyms":[{"name":"3' coding exon","type":"related"},{"name":"three prime coding exon","type":"exact"}],"termid":"SO:0000202"}


id: PBO:0080503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wound and keratinocyte migration associated lncRNA 2","termid":"PBO:0080503"}


id: GO:0047599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coformycin + NADP+ = 8-oxocoformycin + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.235","RHEA:23168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"8-oxocoformycin reductase activity","secondary_identifiers":["KEGG_REACTION:R03667","MetaCyc:8-OXOCOFORMYCIN-REDUCTASE-RXN"],"synonyms":[{"name":"8-ketodeoxycoformycin reductase activity","type":"related"},{"name":"coformycin:NADP+ 8-oxidoreductase activity","type":"related"}],"termid":"GO:0047599"}


id: PBO:0064726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 62","termid":"PBO:0064726"}


id: PBO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 6 Y-linked","termid":"PBO:0061816"}


id: PBO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex kleisin subunit Rec8","termid":"PBO:0090418"}


id: PBO:0078759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 2","termid":"PBO:0078759"}


id: GO:1904958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:PARL","PMID:21347250","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dopaminergic neuron differentiation","termid":"GO:1904340"},{"relation_name":"is_a","term_name":"regulation of midbrain dopaminergic neuron differentiation","termid":"GO:1904956"},{"relation_name":"positively_regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"activation of DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of mDA neuron differentiation","type":"narrow"},{"name":"activation of midbrain DA neurogenesis","type":"narrow"},{"name":"activation of midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of midbrain dopaminergic neuron production","type":"narrow"},{"name":"positive regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of mDA neuron differentiation","type":"exact"},{"name":"positive regulation of midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of mDA neuron differentiation","type":"exact"},{"name":"up regulation of midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of mDA neuron differentiation","type":"exact"},{"name":"up-regulation of midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of mDA neuron differentiation","type":"exact"},{"name":"upregulation of midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904958"}


id: PBO:0045398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 3","termid":"PBO:0045398"}


id: GO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfonate + 2-oxoglutarate + O2 = sulfite + aminoacetaldehyde + succinate + CO2.","definition_xrefs":["GOC:clt","PMID:10482536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sulfonate dioxygenase activity","synonyms":[{"name":"sulfonate/alpha-ketoglutarate dioxygenase activity","type":"exact"},{"name":"sulphonate dioxygenase activity","type":"exact"}],"termid":"GO:0000907"}


id: GO:0046226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of coumarins, compounds derived from the phenylacrylic skeleton of cinnamic acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin metabolic process","termid":"GO:0009804"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"coumarin catabolic process","synonyms":[{"name":"coumarin breakdown","type":"exact"},{"name":"coumarin catabolism","type":"exact"},{"name":"coumarin degradation","type":"exact"}],"termid":"GO:0046226"}


id: GO:0098944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic recycling endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic recycling endosome","termid":"GO:0098837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"postsynaptic recycling endosome membrane","termid":"GO:0098944"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: PBO:0080347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 111 pseudogene","termid":"PBO:0080347"}


id: PBO:0066612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1 pseudogene 3","termid":"PBO:0066612"}


id: PBO:0047637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP1A-SDCBP2 readthrough (NMD candidate)","termid":"PBO:0047637"}


id: PBO:0049805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1","termid":"PBO:0049805"}


id: PBO:0043721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C","termid":"PBO:0043721"}


id: PBO:0050083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 3","termid":"PBO:0050083"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: GO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains syntaxin 6, syntaxin 16, and Vti1a (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"syntaxin-6-syntaxin-16-Vti1a complex","termid":"GO:0070067"}


id: PBO:0059299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L48","termid":"PBO:0059299"}


id: PBO:0040955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 26","termid":"PBO:0040955"}


id: PBO:0058298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4672","termid":"PBO:0058298"}


id: PBO:0084898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation release factor; involved in stop codon recognition and hydrolysis of the peptidyl-tRNA bond during mitochondrial translation; lack of MRF1 causes mitochondrial genome instability","termid":"PBO:0084898"}


id: PBO:0030683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pear-shaped_vegetative_cell","termid":"PBO:0030683"}


id: PBO:0066853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 153","termid":"PBO:0066853"}


id: GO:0061013
data:
  {"annotated_genes":["SJAG_02808","SJAG_01053","SJAG_03113","SJAG_03696","SJAG_01191","SJAG_05322","SJAG_05694","SJAG_00966","SJAG_02540","SJAG_01843","SJAG_02036","SJAG_02370","SJAG_00759","SJAG_03597","SJAG_04880","SJAG_03886","SJAG_00670","SJAG_04350","SJAG_01944","SJAG_04824","SJAG_04407","SJAG_16457","SJAG_04427","SJAG_04006","SJAG_02213","SJAG_03157","SJAG_04825","SJAG_02723","SJAG_02725","SJAG_03883","SJAG_01910","SJAG_00285","SJAG_04946","SJAG_03179","SJAG_01521","SJAG_04321","SJAG_05010","SJAG_02383","SJAG_00343","SJAG_01625","SJAG_03745","SJAG_03448","SJAG_03876","SJAG_02239","SJAG_04682","SJAG_01836","SJAG_04084","SJAG_05014","SJAG_00686","SJAG_01436","SJAG_02573","SJAG_03283","SJAG_01818","SJAG_04153","SJAG_00391","SJAG_00854","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111740],"is_not":false,"summary":null,"term":"GO:0061013"},{"annotations":[113346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[77702,85889,77407,95558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[105165,73931,76575,75025,78315,107234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[71784,72347,74490,76498,71493,73810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043928"},{"annotations":[67296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[85198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[84809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902373"},{"annotations":[85488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[88674,71779,101816,111009,92780,91472,97510,102788,71488,110570,87862,72342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[78054,95394,93577,110293,70843,93658,75721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[87566,88201,91069,112250,104496,71361,88108,77682,86454,85489,110777,89920,72418,87621,98437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[102005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[85405,100278,72613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[84157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043488"},{"annotations":[85502,85892,87157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"},{"annotations":[94022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060211"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of cellular catabolic process","termid":"GO:0031329"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01836":null,"SJAG_01843":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02723":null,"SJAG_02725":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0044248","GO:0010467"],"is_obsolete":false,"name":"regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of mRNA decay","type":"related"}],"termid":"GO:0061013","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0043928":null,"GO:0048255":null,"GO:0060211":null,"GO:0060213":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:0120271":null,"GO:0120272":null,"GO:1902373":null,"GO:1990074":null,"GO:2000815":null}}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: GO:0019803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The carboxylation of peptidyl-aspartic acid to form peptidyl-L-beta-carboxyaspartic acid.","definition_xrefs":["RESID:AA0304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"},{"relation_name":"is_a","term_name":"protein carboxylation","termid":"GO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid carboxylation","termid":"GO:0019803"}


id: GO:0019137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a thioglucoside + H2O = a thiol + a sugar.","definition_xrefs":["EC:3.2.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"thioglucosidase activity","secondary_identifiers":["MetaCyc:RXN-9946"],"synonyms":[{"name":"myrosinase activity","type":"exact"},{"name":"sinigrase activity","type":"exact"},{"name":"sinigrinase activity","type":"exact"},{"name":"thioglucoside glucohydrolase activity","type":"exact"}],"termid":"GO:0019137"}


id: PBO:0078357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 3-1","termid":"PBO:0078357"}


id: GO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasmic vesicle membrane","termid":"GO:0044162"},{"relation_name":"part_of","term_name":"double membrane vesicle viral factory","termid":"GO:0039718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory membrane","synonyms":[{"name":"membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062242"}


id: PBO:0027604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0027604"}


id: SO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A family of RNAs are found as part of the enigmatic vault ribonucleoprotein complex. The complex consists of a major vault protein (MVP), two minor vault proteins (VPARP and TEP1), and several small untranslated RNA molecules. It has been suggested that the vault complex is involved in drug resistance.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Vault_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:vault_RNA","type":"exact"},{"name":"vault RNA","type":"exact"}],"termid":"SO:0000404"}


id: PBO:0076439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 12","termid":"PBO:0076439"}


id: FYPO:0003718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tributyltin. Cells stop growing (and may die) at a concentration of tributyltin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tributyltin","synonyms":[{"name":"hypersensitive to tributyltin","type":"exact"},{"name":"sensitive to tributylstannane","type":"exact"},{"name":"sensitive to tributyltin during mitotic cell cycle","type":"related"},{"name":"sensitive to tributyltin during vegetative growth","type":"exact"}],"termid":"FYPO:0003718"}


id: GO:0009470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class IIa cytochrome c (obsolete GO:0009470)","synonyms":[{"name":"class IIa cytochrome c","type":"exact"}],"termid":"GO:0009470"}


id: PBO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4","termid":"PBO:0043463"}


id: PBO:0057394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-2","termid":"PBO:0057394"}


id: PBO:0079245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 19","termid":"PBO:0079245"}


id: PBO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(q23.3)","termid":"PBO:0047929"}


id: PBO:0083211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF SEC59/YML013C","termid":"PBO:0083211"}


id: PBO:0090164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription repressor Scr1","termid":"PBO:0090164"}


id: FYPO:0001223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000032"],"is_obsolete":false,"name":"binucleate multiseptate vegetative cell","synonyms":[{"name":"binucleate multiseptate cell during mitotic cell cycle","type":"related"},{"name":"binucleate multiseptate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0001223"}


id: _global:regulates_o_results_in_acquisition_of_features_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the regulates relation with the results_in_acquisition_of_features_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_acquisition_of_features_of","secondary_identifiers":["GOREL:0001010"],"synonyms":[{"name":"regulates differentiation of","type":"exact"},{"name":"regulates_o_results_in_acquisition_of_features_of","type":"exact"}],"termid":"_global:regulates_o_results_in_acquisition_of_features_of"}


id: PBO:0072135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 12","termid":"PBO:0072135"}


id: GO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-822"],"synonyms":[{"name":"fructan anabolism","type":"exact"},{"name":"fructan biosynthesis","type":"exact"},{"name":"fructan formation","type":"exact"},{"name":"fructan synthesis","type":"exact"},{"name":"levan biosynthesis","type":"exact"},{"name":"levan biosynthetic process","type":"exact"}],"termid":"GO:0010146"}


id: GO:1904174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone demethylase activity (H3-K4 specific).","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24843136","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone demethylase activity (H3-K4 specific) (obsolete GO:1904174)","synonyms":[{"name":"down regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"down-regulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"downregulation of histone demethylase activity (H3-K4 specific)","type":"exact"},{"name":"inhibition of histone demethylase activity (H3-K4 specific)","type":"narrow"}],"termid":"GO:1904174"}


id: PBO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member E","termid":"PBO:0047262"}


id: PBO:0002583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein (predicted)","termid":"PBO:0002583"}


id: PBO:0054602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2006","termid":"PBO:0054602"}


id: PBO:0068806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 43, pseudogene","termid":"PBO:0068806"}


id: PR:O94274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.26 gene.","definition_xrefs":["UniProtKB:O94274","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.26","synonyms":[{"name":"Spom972h-SPBP8B7.26","type":"exact"}],"termid":"PR:O94274"}


id: PBO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 47","termid":"PBO:0080086"}


id: PATO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000506 absolute sensitivity value (obsolete PATO:0000506)","termid":"PATO:0000506"}


id: PBO:0072291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 9","termid":"PBO:0072291"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["MetaCyc:3.5.1.80-RXN","EC:3.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0019213","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["RHEA:18149"],"termid":"GO:0047419"}


id: internal:alternate
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternate","termid":"internal:alternate"}


id: PBO:0032759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA element modulatory factor homolog Tmf1 (predicted)","termid":"PBO:0032759"}


id: PR:O42973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC20F10.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20F10.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.03","synonyms":[{"name":"Spom972h-SPBC20F10.03","type":"exact"}],"termid":"PR:O42973"}


id: PBO:0086760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; regulated by the metal-responsive Aft1p transcription factor; highly inducible in zinc-depleted conditions; localizes to the soluble fraction; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; YOR387C has a paralog, VEL1, that arose from a single-locus duplication","termid":"PBO:0086760"}


id: PBO:0083804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that binds ribosomal protein L11; required for nuclear export of the 60S pre-ribosomal subunit during ribosome biogenesis; localizes to the nucleolus and in foci along nuclear periphery; cooperates with Ebp2p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering; mouse homolog shows altered expression in Huntington's disease model mice","termid":"PBO:0083804"}


id: GO:0005805
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-Golgi transport vesicle (obsolete GO:0005805)","synonyms":[{"name":"ER-Golgi transport vesicle","type":"exact"}],"termid":"GO:0005805"}


id: PBO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1","termid":"PBO:0071753"}


id: PBO:0057607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 941-4","termid":"PBO:0057607"}


id: PR:Q9US40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C1039.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.01","synonyms":[{"name":"Spom972h-SPAC1039.01","type":"exact"}],"termid":"PR:Q9US40"}


id: PATO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant that exists at the cellular level of organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular quality","termid":"PATO:0001396"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:12133724","PMID:11048732","Prosite:PS01259","PMID:9704409","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: PBO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M B-type cyclin Cdc13","termid":"PBO:0003179"}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["UniProtKB:Q9P7F9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: GO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of the ectoplacental cone acquires specialized features of a spongiotrophoblast of the placenta. A spongiotrophoblast cell is a basophilic cell.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast differentiation","synonyms":[{"name":"spongiotrophoblast cell differentiation","type":"exact"}],"termid":"GO:0060708"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PBO:0004949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Spf38","termid":"PBO:0004949"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: PBO:0000565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1","termid":"PBO:0000565"}


id: PBO:0075013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-24","termid":"PBO:0075013"}


id: PBO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 146","termid":"PBO:0042079"}


id: GO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation","synonyms":[{"name":"down regulation of antigen processing and presentation","type":"exact"},{"name":"down-regulation of antigen processing and presentation","type":"exact"},{"name":"downregulation of antigen processing and presentation","type":"exact"},{"name":"inhibition of antigen processing and presentation","type":"narrow"}],"termid":"GO:0002578"}


id: FYPO:0009044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of sodium chloride and methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to sodium chloride and methyl methanesulfonate","synonyms":[{"name":"resistance to sodium chloride and methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and methyl methanesulfonate in combination","type":"exact"},{"name":"resistant to sodium chloride and methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009044"}


id: PBO:0045307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 alpha","termid":"PBO:0045307"}


id: PBO:0076383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming acidic coiled-coil containing protein 1","termid":"PBO:0076383"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: PBO:0065631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 11","termid":"PBO:0065631"}


id: GO:0009193
data:
  {"annotated_genes":["SJAG_00779","SJAG_04665","SJAG_03676","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[102595,88048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[78842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[75499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_03676":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009193","terms_by_termid":{"GO:0006225":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: FYPO:0003752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of polyadenylated messenger RNA (mRNA) measured in the nucleus is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased nuclear polyadenylated mRNA level during vegetative growth","termid":"FYPO:0003119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased total nuclear polyadenylated mRNA level during vegetative growth","synonyms":[{"name":"increased level of bulk nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased level of total nuclear polyadenylated mRNA during vegetative growth","type":"exact"},{"name":"increased nuclear bulk poly(A)+ mRNA level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated mRNA accumulation during vegetative growth","type":"related"},{"name":"increased total nuclear polyadenylated mRNA level during mitotic cell cycle","type":"related"},{"name":"increased total nuclear polyadenylated mRNA transcript level during vegetative growth","type":"exact"},{"name":"increased total nuclear polyadenylated messenger RNA level during vegetative growth","type":"exact"},{"name":"total nuclear poly(A)+ mRNA accumulation","type":"related"},{"name":"total nuclear poly-A mRNA accumulation","type":"related"}],"termid":"FYPO:0003752"}


id: GO:0010290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of chlorophyll catabolites such as non-fluorescent chlorophyll catabolites (NCCs), from one side of a membrane to the other.","definition_xrefs":["PMID:9681016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"chlorophyll catabolite transmembrane transporter activity","termid":"GO:0010290"}


id: PBO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0035961"}


id: PBO:0029643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_low_osmolarity","termid":"PBO:0029643"}


id: PBO:0057189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 361","termid":"PBO:0057189"}


id: GO:0004663
data:
  {"annotated_genes":["SJAG_03810","SJAG_04923","SJAG_04434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73480,77586,96860],"is_not":false,"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family.","definition_xrefs":["EC:2.5.1.60","GOC:mah","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein geranylgeranyltransferase activity","termid":"GO:0004661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"Rab geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:RXN-19996","MetaCyc:RXN-19995","MetaCyc:RXN-19997"],"synonyms":[{"name":"GGTase-II activity","type":"exact"},{"name":"GGTaseII activity","type":"exact"},{"name":"Rab-protein geranylgeranyltransferase activity","type":"exact"},{"name":"RabGGTase activity","type":"exact"},{"name":"geranylgeranyl-diphosphate,geranylgeranyl-diphosphate:protein-cysteine geranyltransferase activity","type":"exact"},{"name":"protein geranylgeranyltransferase type II activity","type":"exact"},{"name":"type II protein geranyl-geranyltransferase activity","type":"related"}],"termid":"GO:0004663","terms_by_termid":{"GO:0004663":null}}


id: PBO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030924"}


id: PBO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-clumped_colony_morphology_(obsolete_FYPO:0000153)","termid":"PBO:0031277"}


id: GO:1990432
data:
  {"annotated_genes":["SJAG_01836","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103118,113141],"is_not":false,"summary":null,"term":"GO:1990432"}]},"cv_name":"biological_process","definition":"The process of forming the mature 3' end of a siRNA molecule.","definition_xrefs":["PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01836":null,"SJAG_02621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"siRNA 3' end processing","type":"exact"},{"name":"small interfering RNA 3'-end processing","type":"exact"}],"termid":"GO:1990432","terms_by_termid":{"GO:1990432":null}}


id: PBO:0029984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane_formation","termid":"PBO:0029984"}


id: PBO:0086053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP fusion protein localizes to the endoplasmic reticulum (ER) and extracellular region, while mCherry fusion protein localizes to the ER and vacuole; mRNA identified as translated by ribosome profiling data; CSS2 is a non-essential gene","termid":"PBO:0086053"}


id: PBO:0027587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion_along_chromosome_arms","termid":"PBO:0027587"}


id: FYPO:0003597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is abolished.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA 3'-end processing","termid":"FYPO:0003596"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished snRNA 3'-end processing","synonyms":[{"name":"abolished snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abolished snRNA 3'-end processing during vegetative growth","type":"exact"},{"name":"snRNA 3'-end processing abolished","type":"exact"}],"termid":"FYPO:0003597"}


id: GO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"aromatic compound biosynthetic process","termid":"GO:0019438"},{"relation_name":"is_a","term_name":"cocaine metabolic process","termid":"GO:0050783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cocaine biosynthetic process","synonyms":[{"name":"cocaine anabolism","type":"exact"},{"name":"cocaine biosynthesis","type":"exact"},{"name":"cocaine formation","type":"exact"},{"name":"cocaine synthesis","type":"exact"}],"termid":"GO:0050799"}


id: PBO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_diphosphoinositol-pentakisphosphate_kinase_activity","termid":"PBO:0034674"}


id: PBO:0085164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nudix hydrolase family member with ADP-ribose pyrophosphatase activity; shown to metabolize O-acetyl-ADP-ribose to AMP and acetylated ribose 5'-phosphate","termid":"PBO:0085164"}


id: PBO:0074726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 81","termid":"PBO:0074726"}


id: PBO:0050498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B8","termid":"PBO:0050498"}


id: GO:0032184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polymer of the small ubiquitin-like protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO binding","termid":"GO:0032183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SUMO polymer binding","synonyms":[{"name":"Smt3 polymer binding","type":"exact"}],"termid":"GO:0032184"}


id: GO:0015174
data:
  {"annotated_genes":["SJAG_04787","SJAG_03256","SJAG_03400","SJAG_00051","SJAG_04637","SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86087,91263],"is_not":false,"summary":null,"term":"GO:0015174"},{"annotations":[95831,77872,92893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[92894,77867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[77865,92895,95832,98222,105304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have side chains with a positive charge at pH 7.3.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_04787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"basic amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0005286","Reactome:R-HSA-8959781","Reactome:R-HSA-8932851","GO:0015326"],"synonyms":[{"name":"basic amino acid permease activity","type":"exact"},{"name":"basic amino acid transporter activity","type":"broad"},{"name":"cationic amino acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015174","terms_by_termid":{"GO:0005290":null,"GO:0015174":null,"GO:0015189":null,"GO:0061459":null}}


id: SO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of loci that can be grouped in a linear order representing the different degrees of linkage among the genes concerned.","definition_xrefs":["ISBN:038752046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linkage_group","secondary_identifiers":["http://en.wikipedia.org/wiki/Linkage_group"],"synonyms":[{"name":"linkage group","type":"exact"}],"termid":"SO:0000018"}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: PBO:0049918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEY2 antisense RNA 1","termid":"PBO:0049918"}


id: PBO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2 pseudogene 1","termid":"PBO:0044020"}


id: PBO:0032758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-glycerol-3-phosphate3-phosphatidyltransferase Pgs1 (predicted)","termid":"PBO:0032758"}


id: PBO:0067861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 163","termid":"PBO:0067861"}


id: GO:0019871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"sodium channel regulator activity","termid":"GO:0017080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"sodium channel inhibitor activity","secondary_identifiers":["GO:0019868"],"termid":"GO:0019871"}


id: GO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"negatively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of haustorium mother cell formation","synonyms":[{"name":"negative regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075195"}


id: PBO:0071790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25 like","termid":"PBO:0071790"}


id: PBO:0068486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 68, pseudogene","termid":"PBO:0068486"}


id: GO:0051674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a cell is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"localization of cell","synonyms":[{"name":"cell localization","type":"exact"},{"name":"establishment and maintenance of cell localization","type":"exact"},{"name":"establishment and maintenance of localization of cell","type":"exact"},{"name":"localisation of cell","type":"exact"}],"termid":"GO:0051674"}


id: FYPO:0001153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of methylamine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular methylamine level","synonyms":[{"name":"normal cellular methylamine accumulation","type":"related"},{"name":"normal cellular methylamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular methylamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001153"}


id: PBO:0081761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF691 divergent transcript","termid":"PBO:0081761"}


id: PBO:0077369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 108","termid":"PBO:0077369"}


id: GO:0021923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain region that is adjacent to the ventricular cavity.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","PMID:12593981","GOC:dph","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}


id: GO:0036033
data:
  {"annotated_genes":["SJAG_03981"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98570],"is_not":false,"summary":null,"term":"GO:0036033"}]},"cv_name":"molecular_function","definition":"Binding to a mediator complex. The mediator complex is a protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:18391015","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mediator complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036033","terms_by_termid":{"GO:0036033":null}}


id: PBO:0060101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 2","termid":"PBO:0060101"}


id: PBO:0083936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactokinase; phosphorylates alpha-D-galactose to alpha-D-galactose-1-phosphate in the first step of galactose catabolism; expression regulated by Gal4p; human homolog GALK2 complements yeast null mutant; GAL1 has a paralog, GAL3, that arose from the whole genome duplication","termid":"PBO:0083936"}


id: GO:0045010
data:
  {"annotated_genes":["SJAG_03455","SJAG_02228","SJAG_01384","SJAG_04479","SJAG_03086","SJAG_01268","SJAG_02245","SJAG_04100","SJAG_01732","SJAG_04624","SJAG_02075","SJAG_01964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85087],"is_not":false,"summary":null,"term":"GO:0045010"},{"annotations":[78478,74303,102500,76762,93442,98155,77137,77663,78350,75659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[74021],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"actin nucleation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"actin filament nucleation","type":"exact"}],"termid":"GO:0045010","terms_by_termid":{"GO:0034314":null,"GO:0034316":null,"GO:0045010":null}}


id: FYPO:0003980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}


id: GO:0023053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a mechanical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by mechanical effect (obsolete GO:0023053)","synonyms":[{"name":"signal initiation by mechanical effect","type":"exact"}],"termid":"GO:0023053"}


id: PBO:0027932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_glucose_starvation","termid":"PBO:0027932"}


id: PBO:0077627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1A pseudogene 1","termid":"PBO:0077627"}


id: GO:0080155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of double fertilization forming a zygote and endosperm. Double fertilization forming a zygote and endosperm is a type of fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the two polar nuclei to form the 3n primary endosperm nucleus and then develops into the endosperm. The ploidy level of the 2n zygote and 3n primary endosperm nucleus is determined by the ploidy level of the parents involved. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["PMID:20478994","GOC:DHL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"regulates","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of double fertilization forming a zygote and endosperm","termid":"GO:0080155"}


id: PR:000050513
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-412 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"Spom-rec8/Phos:3","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S412)","type":"exact"}],"termid":"PR:000050513"}


id: GO:0015823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phenylalanine, 2-amino-3-phenylpropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phenylalanine transport","synonyms":[{"name":"L-phenylalanine transport","type":"narrow"}],"termid":"GO:0015823"}


id: PBO:0043759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8C","termid":"PBO:0043759"}


id: SO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a Y RNA.","definition_xrefs":["PMID:1698620","PMID:6187471","PMID:7520568","PMID:6816230","PMID:7539809","PMID:8836182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_gene","termid":"SO:0002359"}


id: PBO:0080821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 2","termid":"PBO:0080821"}


id: GO:1902581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular localization which involves another organism.","definition_xrefs":["GOC:jl","GOC:TermGenie","GO_REF:0000089"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular localization (obsolete GO:1902581)","synonyms":[{"name":"multi organism cellular localization","type":"exact"}],"termid":"GO:1902581"}


id: PBO:0026816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_nitrogen_starvation","termid":"PBO:0026816"}


id: PBO:0058326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4699","termid":"PBO:0058326"}


id: PBO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_C-shaped_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034646"}


id: GO:0036109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-linolenic acid, an unsaturated omega-6 fatty acid that has the molecular formula C18H32O2.","definition_xrefs":["PMID:15538555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"alpha-linolenic acid metabolic process","secondary_identifiers":["Wikipedia:Linoleic_acid"],"synonyms":[{"name":"ALA metabolism","type":"exact"},{"name":"alpha-linolenic acid metabolism","type":"exact"}],"termid":"GO:0036109"}


id: PBO:0059633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule crosslinking factor 1","termid":"PBO:0059633"}


id: PBO:0040820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting killer","termid":"PBO:0040820"}


id: PBO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain Dhc1","termid":"PBO:0002609"}


id: GO:0052922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate + 2 isopentenyl diphosphate = 2 diphosphate + all-trans-hexaprenyl diphosphate.","definition_xrefs":["RHEA:27555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"hexaprenyl diphosphate synthase (geranylgeranyl-diphosphate specific) activity","secondary_identifiers":["KEGG_REACTION:R09246","MetaCyc:RXN-11485","EC:2.5.1.82"],"synonyms":[{"name":"(all-E) hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"(all-trans)-hexaprenyl-diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl diphosphate synthase activity","type":"broad"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"broad"}],"termid":"GO:0052922"}


id: PBO:0080933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor","termid":"PBO:0080933"}


id: PBO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 3","termid":"PBO:0070377"}


id: FYPO:0005604
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Rad52 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of Rad52 focus presence during vegetative growth","termid":"FYPO:0007191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Rad52 foci during cellular response to ionizing radiation","type":"related"},{"name":"increased duration of Rad22 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Rad52 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Rad52 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Rad52 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005604"}


id: GO:1990465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction a long-chain aldehyde + O2 + 2 NADPH = an alkane + formate + H2O + 2 NADP+.","definition_xrefs":["PMID:22947199","GOC:mengo_curators","RHEA:21440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"aldehyde oxygenase (deformylating) activity","secondary_identifiers":["EC:4.1.99.5"],"termid":"GO:1990465"}


id: PBO:0072792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 2","termid":"PBO:0072792"}


id: FYPO:0005717
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal protein kinase activity during mitosis","synonyms":[{"name":"normal protein kinase activity during mitotic M phase","type":"related"},{"name":"normal protein kinase activity during mitotic M-phase","type":"related"}],"termid":"FYPO:0005717"}


id: GO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a cell outer membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of cell outer membrane","synonyms":[{"name":"extrinsic to external leaflet of cell outer membrane","type":"exact"},{"name":"extrinsic to external side of cell outer membrane","type":"narrow"},{"name":"extrinsic to external side of outer membrane","type":"exact"}],"termid":"GO:0031242"}


id: GO:0005835
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71119,72135],"is_not":false,"summary":null,"term":"GO:0005835"}]},"cv_name":"cellular_component","definition":"A multienzyme complex that catalyses the synthesis of fatty acids from acetyl CoA.","definition_xrefs":["ISBN:0716746840","GOC:pde","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fatty acid synthase complex","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["GO:0031373","GO:0031374","Wikipedia:Fatty_acid_synthetase_complex"],"synonyms":[{"name":"FAS complex","type":"exact"},{"name":"cytosolic FAS complex","type":"exact"},{"name":"cytosolic fatty acid synthase complex","type":"exact"},{"name":"cytosolic type I FAS complex","type":"exact"},{"name":"cytosolic type I fatty acid synthase complex","type":"exact"},{"name":"fatty acid synthetase complex","type":"exact"},{"name":"holo-[acyl-carrier-protein] synthase complex","type":"related"}],"termid":"GO:0005835","terms_by_termid":{"GO:0005835":null}}


id: PBO:0067918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 220","termid":"PBO:0067918"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: PATO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's magnitude of or the relationships between its repeated parts lack consistency.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular spatial pattern","termid":"PATO:0000330"}


id: PBO:0080372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set pre-B cell surrogate light chain 1","termid":"PBO:0080372"}


id: GO:0015188
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98221,105303],"is_not":false,"summary":null,"term":"GO:0015188"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-isoleucine from one side of a membrane to the other. L-isoleucine is (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-isoleucine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-isoleucine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015188","terms_by_termid":{"GO:0015188":null}}


id: PBO:0074686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 66","termid":"PBO:0074686"}


id: GO:1902013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(glycerol phosphate) teichoic acid.","definition_xrefs":["GOC:TermGenie","PMID:11882717","UniPathway:UPA00827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902013"}


id: PBO:0069010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 254, pseudogene","termid":"PBO:0069010"}


id: PBO:0071992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 21","termid":"PBO:0071992"}


id: PBO:0049661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 15","termid":"PBO:0049661"}


id: PBO:0040829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 5","termid":"PBO:0040829"}


id: PBO:0075212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 2","termid":"PBO:0075212"}


id: GO:1900150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to fungus.","definition_xrefs":["GOC:TermGenie","PMID:22242006","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to fungus","secondary_identifiers":["GO:2000072"],"synonyms":[{"name":"regulation of defence response to fungi","type":"exact"},{"name":"regulation of defence response to fungus","type":"exact"},{"name":"regulation of defense response to fungi","type":"exact"},{"name":"regulation of defense response to fungi, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to fungus, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungi","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungus","type":"narrow"},{"name":"regulation of response to pathogenic fungus (incompatible interaction)","type":"narrow"}],"termid":"GO:1900150"}


id: PBO:0000659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein (predicted)","termid":"PBO:0000659"}


id: GO:0018906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl tert-butyl ether, 2-methoxy-2-methylpropane. Methyl tert-butyl ether is a synthetic chemical which is mixed with gasoline for use in reformulated gasoline. It was first introduced as an additive for unleaded gasoline in the 1980s. It is also used as a laboratory reagent and a pharmaceutical agent.","definition_xrefs":["UM-BBD_pathwayID:mtb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methyl tert-butyl ether metabolic process","synonyms":[{"name":"methyl tert-butyl ether metabolism","type":"exact"}],"termid":"GO:0018906"}


id: PBO:0031821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_apoptosis","termid":"PBO:0031821"}


id: PBO:0110385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3122","termid":"PBO:0110385"}


id: GO:1903506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of nucleic acid-templated transcription.","definition_xrefs":["GOC:pr","GOC:vw","GOC:TermGenie","GO_REF:0000058","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleic acid-templated transcription (obsolete GO:1903506)","termid":"GO:1903506"}


id: GO:0031213
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals) and an RSF1 homolog. It mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In mammals, RSF is involved in regulation of transcription from RNA polymerase II promoters).","definition_xrefs":["GOC:krc","PMID:15284901","PMID:16568949","PMID:12972596","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"RSF complex","synonyms":[{"name":"remodeling and spacing factor complex","type":"exact"}],"termid":"GO:0031213"}


id: PBO:0085992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for survival upon exposure to K1 killer toxin","termid":"PBO:0085992"}


id: FYPO:0000512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of karyogamy involved in conjugation with cellular fusion is decreased.","gene_count":0,"genotype_count":0,"name":"obsolete decreased nuclear fusion during mating (obsolete FYPO:0000512)","termid":"FYPO:0000512"}


id: GO:2000843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of testosterone secretion","termid":"GO:2000843"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: MOD:01241
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-aspartic acid 4-methyl ester.","definition_xrefs":["PubMed:12185208","OMSSA:19","Unimod:298#D"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-aspartic acid 4-methyl ester","termid":"MOD:01181"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-aspartic acid 4-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyld","type":"exact"}],"termid":"MOD:01241"}


id: PBO:0005881
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cox1 intron-2","termid":"PBO:0005881"}


id: PBO:0051201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-28","termid":"PBO:0051201"}


id: PBO:0085661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation","termid":"PBO:0085661"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: GO:0097181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor V (F5); formation of the complex inhibits the serine protease activity of coagulation factor V.","definition_xrefs":["GOC:ans","PMID:6323392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor V complex","synonyms":[{"name":"PCI-coagulation factor V complex","type":"exact"},{"name":"SERPINA5-coagulation factor V complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor V complex","type":"exact"},{"name":"protein C inhibitor-F5 complex","type":"exact"},{"name":"serpin A5-coagulation factor V complex","type":"exact"}],"termid":"GO:0097181"}


id: GO:1902292
data:
  {"annotated_genes":["SJAG_03160","SJAG_05239","SJAG_04671","SJAG_03048","SJAG_02394","SJAG_03438","SJAG_00884","SJAG_00364","SJAG_00327","SJAG_02098","SJAG_02607","SJAG_03720","SJAG_04210","SJAG_01624","SJAG_00857","SJAG_01267","SJAG_02908","SJAG_02627","SJAG_02800","SJAG_04995","SJAG_00399","SJAG_02667","SJAG_00874","SJAG_01354","SJAG_04879","SJAG_05301","SJAG_02172","SJAG_03451","SJAG_04341","SJAG_00696","SJAG_01823","SJAG_01762","SJAG_02348","SJAG_02162","SJAG_03927","SJAG_01210","SJAG_02074","SJAG_04994","SJAG_00536","SJAG_03695","SJAG_00311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105223,108752,110531,102681],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[98720],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[94903,70292,110534,74647,98367,108353,108755,110416,102684,105822,106877,110256,78064,92857,108671,102583,87591,77557,72690,86126,92957,73327,74148,71972,77942,71886,101781,103375,76130,107134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[97797,93294,104194],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[112356,98723,107268],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[101971,97802,84786,111360],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[94850],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication initiation","termid":"GO:0006270"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"cell cycle DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"DNA endoreduplication initiation involved in cell cycle DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in cell cycle DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA-dependent DNA replication initiation involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902292","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: PBO:0040788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed X-linked 5","termid":"PBO:0040788"}


id: PR:O74969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity glucose transporter ght2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.08","synonyms":[{"name":"Spom972h-ght2","type":"exact"},{"name":"hexose transporter 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74969"}


id: PBO:0059641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 7","termid":"PBO:0059641"}


id: PBO:0027460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rotenone","termid":"PBO:0027460"}


id: MOD:01252
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00933. Remap to MOD:00933.","definition_xrefs":["PubMed:9448752","Unimod:319#R"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01252 5-hydro-5-methylimidazol-4-one, methylglyoxal arginine adduct (+54 amu) (obsolete MOD:01252)","synonyms":[{"name":"Delta:H(2)C(3)O(1)","type":"related"},{"name":"MDA adduct +54","type":"related"}],"termid":"MOD:01252"}


id: PBO:0058735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6860","termid":"PBO:0058735"}


id: PBO:0079339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 23B","termid":"PBO:0079339"}


id: PBO:0059837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR1 pseudogene 1","termid":"PBO:0059837"}


id: GO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate = glyoxylate + succinate.","definition_xrefs":["EC:4.1.3.1","RHEA:13245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"isocitrate lyase activity","secondary_identifiers":["MetaCyc:ISOCIT-CLEAV-RXN","KEGG_REACTION:R00479"],"synonyms":[{"name":"ICL activity","type":"related"},{"name":"isocitrase activity","type":"related"},{"name":"isocitratase activity","type":"related"},{"name":"isocitrate glyoxylate-lyase (succinate-forming)","type":"related"},{"name":"isocitrate glyoxylate-lyase activity","type":"related"},{"name":"isocitritase activity","type":"related"},{"name":"threo-DS-isocitrate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0004451"}


id: PR:Q92360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6G9.15c gene.","definition_xrefs":["UniProtKB:Q92360","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6G9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.15c","synonyms":[{"name":"Spom972h-SPAC6G9.15c","type":"exact"}],"termid":"PR:Q92360"}


id: GO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme phosphorylase kinase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"phosphorylase kinase regulator activity","synonyms":[{"name":"phosphorylase kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008607"}


id: GO:0043099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates a pyrimidine deoxyribonucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside salvage","termid":"GO:0043097"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside biosynthetic process","termid":"GO:0046126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside salvage","termid":"GO:0043099"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["PMID:11910892","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: PBO:0091842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel","termid":"PBO:0091842"}


id: GO:1902911
data:
  {"annotated_genes":["SJAG_01207","SJAG_04368","SJAG_04280","SJAG_02374","SJAG_03206","SJAG_04312","SJAG_03602","SJAG_01456","SJAG_03501","SJAG_00142","SJAG_01274","SJAG_01401","SJAG_04232","SJAG_04420","SJAG_00100","SJAG_05978","SJAG_03160","SJAG_05017","SJAG_03525","SJAG_03802","SJAG_01587","SJAG_02183","SJAG_03695","SJAG_00150","SJAG_01245","SJAG_00512","SJAG_03618","SJAG_01149","SJAG_03061","SJAG_02275","SJAG_02785","SJAG_04140","SJAG_00901","SJAG_04486","SJAG_00995","SJAG_04614","SJAG_03789","SJAG_04502","SJAG_02441","SJAG_02057","SJAG_01716","SJAG_02404","SJAG_01213","SJAG_00758","SJAG_03591","SJAG_00439","SJAG_03048","SJAG_03699","SJAG_03967","SJAG_01581","SJAG_01799","SJAG_03931"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112870,72156,78325,72462,90380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[71030,73150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[94497,93938,98882,111123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110115"},{"annotations":[78008,91359,106160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[75746,73749,101610,99721,70780,103666,71519,70362,77087,97772,74433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[107260,74941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[113583,87329,90521,99514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[70374,111265,113260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031588"},{"annotations":[104175,104330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[113313,90816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009365"},{"annotations":[73554,103715,86832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[70323,73684,77417,104282,87786,85948,109986,75458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[108168,107312,75337],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of protein kinase activity.","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","PMID:24606918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01581":null,"SJAG_01587":null,"SJAG_01716":null,"SJAG_01799":null,"SJAG_02057":null,"SJAG_02183":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03789":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04232":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04486":null,"SJAG_04502":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1902911","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0005952":null,"GO:0005956":null,"GO:0009365":null,"GO:0031431":null,"GO:0031588":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null,"GO:0090730":null,"GO:0110115":null,"GO:1990316":null}}


id: GO:0060052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament cytoskeleton organization","termid":"GO:0045104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"neurofilament cytoskeleton organization","synonyms":[{"name":"neurofilament cytoskeleton organisation","type":"exact"},{"name":"neurofilament cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0060052"}


id: GO:0032033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin II complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin II binding","termid":"GO:0045159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin II light chain binding","termid":"GO:0032033"}


id: PBO:0035957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_checkpoint_complex_assembly","termid":"PBO:0035957"}


id: FYPO:0001051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when longer than wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, elongated cell (obsolete FYPO:0001051)","synonyms":[{"name":"mitotic catastrophe, elongated cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, elongated cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe, long cell","type":"exact"}],"termid":"FYPO:0001051"}


id: GO:0014723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle contraction by changing calcium ion binding affinity of the myofibril.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by calcium ion signaling","termid":"GO:0014722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle contraction by modulation of calcium ion sensitivity of myofibril","synonyms":[{"name":"regulation of calcium ion sensitivity of myofibril involved in skeletal muscle contraction","type":"exact"}],"termid":"GO:0014723"}


id: SO:1000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segments.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"inversion_cum_translocation","termid":"SO:1000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted intrachromosomal transposition","type":"exact"}],"termid":"SO:1000158"}


id: GO:0035335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"}


id: PR:P56288
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translation initiation factor eIF-2B subunit gamma that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02228","PANTHER:PTHR22572:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.09","secondary_identifiers":["UniProtKB:P56288"],"synonyms":[{"name":"Spom972h-EIF2B3","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56288"}


id: PBO:0059149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGUK p55 scaffold protein 1","termid":"PBO:0059149"}


id: FYPO:0001179
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[114572,114564,114565,114576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation during vegetative growth","type":"exact"},{"name":"abolished protein localization during mitotic cell cycle","type":"related"},{"name":"protein absent from specific location in cell during vegetative growth","type":"related"},{"name":"protein localization abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001179","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: PBO:0088723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein folding protein","termid":"PBO:0088723"}


id: GO:1990132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of misfolded proteins that are being held by the chaperone heat shock protein (Hsp) and targeting them for destruction by the Ub-proteasome machinery.","definition_xrefs":["GOC:rb","PMID:23530227"],"gene_count":0,"genotype_count":0,"name":"obsolete release of misfolded protein from chaperone (obsolete GO:1990132)","synonyms":[{"name":"release of misfolded protein from chaperone","type":"exact"}],"termid":"GO:1990132"}


id: GO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2, as carried out by individual cells.","definition_xrefs":["GOC:jl","GOC:krc","Wikipedia:Alkyne"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolic process","termid":"GO:0044237"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular alkyne metabolic process","synonyms":[{"name":"alkyne metabolism","type":"exact"}],"termid":"GO:0043452"}


id: PBO:0058835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8065","termid":"PBO:0058835"}


id: PBO:0089355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-diphospho-sugar transferase, unknown specificity","termid":"PBO:0089355"}


id: PBO:0077361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 101","termid":"PBO:0077361"}


id: PBO:0108880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1 complex Tor2 interacting protein 1","termid":"PBO:0108880"}


id: GO:0075284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a multicellular or syncytial spore via septations derived from mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation","termid":"GO:0030436"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075284"}


id: PBO:0049175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 10","termid":"PBO:0049175"}


id: GO:0016780
data:
  {"annotated_genes":["SJAG_00999","SJAG_00168","SJAG_01955","SJAG_02523","SJAG_03180","SJAG_03506","SJAG_04972","SJAG_04165","SJAG_04319","SJAG_04317","SJAG_01233","SJAG_02488","SJAG_00924"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043337"},{"annotations":[88642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008808"},{"annotations":[71394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008444"},{"annotations":[75729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003881"},{"annotations":[109839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003882"},{"annotations":[76488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"},{"annotations":[88657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004142"},{"annotations":[88658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004307"},{"annotations":[92849,93213,74389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008897"},{"annotations":[77186,71836,109948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051377"},{"annotations":[98970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003975"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00924":null,"SJAG_00999":null,"SJAG_01233":null,"SJAG_01955":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_03180":null,"SJAG_03506":null,"SJAG_04165":null,"SJAG_04317":null,"SJAG_04319":null,"SJAG_04972":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphotransferase activity, for other substituted phosphate groups","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-162742","EC:2.7.8.-","Reactome:R-HSA-163069"],"termid":"GO:0016780","terms_by_termid":{"GO:0003881":null,"GO:0003882":null,"GO:0003975":null,"GO:0004142":null,"GO:0004307":null,"GO:0008444":null,"GO:0008808":null,"GO:0008897":null,"GO:0043337":null,"GO:0051267":null,"GO:0051377":null}}


id: GO:0140981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-medium-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-medium-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:75279","PMID:35934685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-19719"],"termid":"GO:0140981"}


id: PBO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2B5 divergent transcript","termid":"PBO:0046029"}


id: MOD:00338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-cyano-L-cysteine.","definition_xrefs":["PubMed:12586941","PubMed:4808702","RESID:AA0333","Unimod:438#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-cyano-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-thiocyanatopropanoic acid","type":"exact"},{"name":"Cyano","type":"related"},{"name":"MOD_RES S-cyanocysteine","type":"exact"},{"name":"S-cyano-L-cysteine","type":"exact"},{"name":"S-cyanocysteine","type":"exact"},{"name":"alpha-amino-beta-thiocyanatopropionic acid","type":"exact"},{"name":"beta-thiocyanatoalanine","type":"exact"},{"name":"cyano","type":"related"},{"name":"serine thiocyanic acid ester","type":"exact"}],"termid":"MOD:00338"}


id: PBO:0055694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1 like","termid":"PBO:0055694"}


id: GO:0015489
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70668],"is_not":false,"summary":null,"term":"GO:0015489"}]},"cv_name":"molecular_function","definition":"Enables the transfer of putrescine from one side of a membrane to the other. Putrescine is 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"putrescine transmembrane transporter activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0015489","terms_by_termid":{"GO:0015489":null}}


id: GO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to RNA polymerase IV core enzyme, a multisubunit eukaryotic nuclear RNA polymerase found in plants and involved in siRNA production.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase core enzyme binding","termid":"GO:0043175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RNA polymerase IV core binding","termid":"GO:0001048"}


id: PBO:0067928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 230","termid":"PBO:0067928"}


id: GO:0098617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenylylselenate => ADP + 3'-phosphoadenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"adenylylselenate kinase activity","secondary_identifiers":["Reactome:R-HSA-2408540"],"termid":"GO:0098617"}


id: GO:0032277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a gonadotropin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"gonadotropin secretion","termid":"GO:0032274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gonadotropin secretion","synonyms":[{"name":"down regulation of gonadotropin secretion","type":"exact"},{"name":"down-regulation of gonadotropin secretion","type":"exact"},{"name":"downregulation of gonadotropin secretion","type":"exact"},{"name":"inhibition of gonadotropin secretion","type":"narrow"},{"name":"negative regulation of gonadotrophin secretion","type":"exact"}],"termid":"GO:0032277"}


id: GO:2000728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA export from nucleus in response to heat stress.","definition_xrefs":["PMID:15210706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA export from nucleus","termid":"GO:0010793"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"regulates","term_name":"mRNA export from nucleus in response to heat stress","termid":"GO:0031990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"regulation of mRNA export from nucleus in response to heat stress","synonyms":[{"name":"regulation of mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"regulation of mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:2000728"}


id: PBO:0057215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-2","termid":"PBO:0057215"}


id: GO:0018706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2,3,5-tetrahydroxybenzene + 1,2,3-trihydroxybenzene = 1,3,5-trihydroxybenzene + 1,2,3,5-tetrahydroxybenzene.","definition_xrefs":["EC:1.97.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyrogallol hydroxytransferase activity","secondary_identifiers":["MetaCyc:1.97.1.2-RXN","RHEA:21000","UM-BBD_reactionID:r0006"],"synonyms":[{"name":"1,2,3,5-tetrahydroxybenzene hydroxyltransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene-pyrogallol hydroxyltransferase (transhydroxylase)","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:1,2,3-trihydroxybenzene hydroxyltransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:1,2,3-trihydroxybenzene hydroxytransferase activity","type":"related"},{"name":"1,2,3,5-tetrahydroxybenzene:pyrogallol transhydroxylase activity","type":"related"},{"name":"pyrogallol hydroxyltransferase activity","type":"exact"},{"name":"transhydroxylase activity","type":"related"}],"termid":"GO:0018706"}


id: PBO:0066024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 3 like","termid":"PBO:0066024"}


id: PBO:0041898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 3","termid":"PBO:0041898"}


id: SO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_hydroxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_hydroxyuridine","secondary_identifiers":["RNAMOD:060"],"synonyms":[{"name":"5-hydroxyuridine","type":"exact"},{"name":"five hydroxyuridine","type":"exact"},{"name":"ho5U","type":"exact"}],"termid":"SO:0001354"}


id: PBO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phosphatidylserine_absent_from_cell","termid":"PBO:0030335"}


id: GO:0006515
data:
  {"annotated_genes":["SJAG_01737","SJAG_03227","SJAG_00354","SJAG_04154","SJAG_00984","SJAG_03794","SJAG_01816","SJAG_00135","SJAG_03657","SJAG_04612","SJAG_01556","SJAG_00436","SJAG_03345","SJAG_02419","SJAG_05022","SJAG_00173","SJAG_04514","SJAG_00054","SJAG_00552","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72288,74279,76225,76369,77097,100116,110956],"is_not":false,"summary":null,"term":"GO:0006515"},{"annotations":[113610,100355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140455"},{"annotations":[105596,105030,103327,108808,104927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"},{"annotations":[83565,98808,84982,108185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"},{"annotations":[106106,75691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00135":null,"SJAG_00173":null,"SJAG_00354":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_00984":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01816":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03227":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03794":null,"SJAG_04154":null,"SJAG_04514":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein quality control for misfolded or incompletely synthesized proteins","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"degradation of misfolded or incompletely synthesized proteins","type":"exact"},{"name":"misfolded or incompletely synthesized protein breakdown","type":"exact"},{"name":"misfolded or incompletely synthesized protein catabolic process","type":"exact"},{"name":"misfolded or incompletely synthesized protein catabolism","type":"exact"},{"name":"misfolded or incompletely synthesized protein degradation","type":"exact"},{"name":"protein quality control (PQC)","type":"exact"},{"name":"protein quality control by the ubiquitin-proteasome system","type":"broad"}],"termid":"GO:0006515","terms_by_termid":{"GO:0006515":null,"GO:0071629":null,"GO:0071630":null,"GO:0140455":null,"GO:0180027":null}}


id: PBO:0078765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA mitochondrial 2-thiouridylase","termid":"PBO:0078765"}


id: PBO:0044757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 41","termid":"PBO:0044757"}


id: FYPO:0002130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to heat","synonyms":[{"name":"abolished protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002130"}


id: GO:0009390
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide.","definition_xrefs":["UM-BBD_enzymeID:e0188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"dimethyl sulfoxide reductase complex","synonyms":[{"name":"dimethyl sulphoxide reductase complex","type":"exact"}],"termid":"GO:0009390"}


id: GO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pivalate + H+ + HSCoA + ATP = pivalyl-CoA + PPi + AMP.","definition_xrefs":["UM-BBD_reactionID:r1032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pivalate-CoA ligase activity","termid":"GO:0034783"}


id: GO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the covalent alteration of one or more amino acid or lipid residues occurring in a lipoprotein, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein modification","termid":"GO:0042160"}


id: PBO:0078522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 13","termid":"PBO:0078522"}


id: GO:1904297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of osmolarity-sensing cation channel activity","termid":"GO:1904295"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of osmolarity-sensing cation channel activity","synonyms":[{"name":"activation of osmolarity-sensing cation channel activity","type":"narrow"},{"name":"up regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"up-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"upregulation of osmolarity-sensing cation channel activity","type":"exact"}],"termid":"GO:1904297"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: GO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the xylem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via xylem (obsolete GO:0023069)","synonyms":[{"name":"signal transmission via xylem","type":"exact"}],"termid":"GO:0023069"}


id: GO:0038082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate, where the MAP kinase (MAPK) is part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase phosphatase activity involved in regulation of osmosensory signaling pathway (obsolete GO:0038082)","synonyms":[{"name":"Hog1 phosphatase activity","type":"narrow"},{"name":"MAP kinase phosphatase activity involved in regulation of osmosensory signalling pathway","type":"exact"},{"name":"MAPK phosphatase activity involved in regulation of osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038082"}


id: PBO:0060589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neighbor of BRCA1 lncRNA 2","termid":"PBO:0060589"}


id: PBO:0072752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 2","termid":"PBO:0072752"}


id: PR:O14068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0357 protein C1687.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.07","synonyms":[{"name":"Spom972h-SPAC1687.07","type":"exact"}],"termid":"PR:O14068"}


id: GO:0050623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-canadine + 2 NADP+ = berberine + H+ + 2 NADPH.","definition_xrefs":["EC:1.5.1.31","RHEA:21268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"berberine reductase activity","secondary_identifiers":["KEGG_REACTION:R07169","MetaCyc:1.5.1.31-RXN"],"synonyms":[{"name":"(R)-canadine synthase activity","type":"related"},{"name":"(R)-tetrahydroberberine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050623"}


id: PBO:0078186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 3-1","termid":"PBO:0078186"}


id: PBO:0058348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4721","termid":"PBO:0058348"}


id: PR:000059629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rhb1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhb1/GTP+","synonyms":[{"name":"Rhb1/GTP+","type":"exact"},{"name":"Spom-rhb1/GTP+","type":"exact"}],"termid":"PR:000059629"}


id: GO:0044322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins.","definition_xrefs":["PMID:11408579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum quality control compartment","synonyms":[{"name":"ER quality control compartment","type":"exact"},{"name":"ER-derived quality control compartment","type":"related"},{"name":"ERQC","type":"exact"}],"termid":"GO:0044322"}


id: GO:0018200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-glutamic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}


id: PBO:0087193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA splicing factor; required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain","termid":"PBO:0087193"}


id: PBO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain","termid":"PBO:0000790"}


id: GO:0061106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the differentiation of a neuroendocrine cell in the stomach.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"negative regulation of neuron differentiation","termid":"GO:0045665"},{"relation_name":"is_a","term_name":"regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061105"},{"relation_name":"negatively_regulates","term_name":"stomach neuroendocrine cell differentiation","termid":"GO:0061102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomach neuroendocrine cell differentiation","termid":"GO:0061106"}


id: GO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052429)","synonyms":[{"name":"modulation by organism of symbiont B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052429"}


id: PBO:0109548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex FHA domain subunit Csc1","termid":"PBO:0109548"}


id: MOD:00542
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:11914093","PubMed:11698400","Unimod:186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyphenylglyoxal arginine","synonyms":[{"name":"HPG","type":"related"},{"name":"Hydroxyphenylglyoxal arginine","type":"related"}],"termid":"MOD:00542"}


id: PBO:0071543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 8","termid":"PBO:0071543"}


id: PBO:0072926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 7","termid":"PBO:0072926"}


id: FYPO:0007285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows an abnormal temporal pattern of localization. For example, a protein may move from one cell tip to the other at an altered frequency or amplitude.","definition_xrefs":["PMID:26960792","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal dynamic protein localization to cell tip","synonyms":[{"name":"abnormal dynamic protein localization to cell end","type":"exact"},{"name":"abnormal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"abnormal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007285"}


id: PBO:0052977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacritin","termid":"PBO:0052977"}


id: GO:0006282
data:
  {"annotated_genes":["SJAG_00369","SJAG_03160","SJAG_01205","SJAG_00823","SJAG_03695","SJAG_03417","SJAG_04457","SJAG_03048","SJAG_02104","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89481,101932,105458],"is_not":false,"summary":null,"term":"GO:0006282"},{"annotations":[97793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[106990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[112355,107267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[102742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000779"},{"annotations":[104613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA repair.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00573":null,"SJAG_00823":null,"SJAG_01205":null,"SJAG_02104":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03417":null,"SJAG_03695":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006282","terms_by_termid":{"GO:0006282":null,"GO:0010569":null,"GO:0045739":null,"GO:1904332":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0010736
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a serum response element (SRE), a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488","GO:0000976"],"is_obsolete":false,"name":"serum response element binding","termid":"GO:0010736"}


id: GO:1990974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby the centrosome is held at the cell center while the nucleus moves to the cell rear by actin retrograde flow resulting in the position of the centrosome between the nucleus and the leading edge of the cell.","definition_xrefs":["GOC:hjd","PMID:21173262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"actin-dependent nuclear migration","synonyms":[{"name":"actin-dependent nuclear movement","type":"related"}],"termid":"GO:1990974"}


id: PR:Q9Y7Y7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas4 gene.","definition_xrefs":["UniProtKB:Q9Y7Y7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.03","synonyms":[{"name":"Spom972h-gas4","type":"exact"}],"termid":"PR:Q9Y7Y7"}


id: GO:0106135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell contraction.","definition_xrefs":["PMID:19525381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell contraction","termid":"GO:0086004"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell contraction","termid":"GO:0086003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"}


id: PBO:0084189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical (see also HTA1) subtypes; DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p","termid":"PBO:0084189"}


id: PR:O60185
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methylthioribose-1-phosphate isomerase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.10c","secondary_identifiers":["UniProtKB:O60185"],"synonyms":[{"name":"M1Pi (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MTR-1-P isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"S-methyl-5-thioribose-1-phosphate isomerase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRI1","type":"exact"},{"name":"translation initiation factor eIF-2B subunit alpha/beta/delta-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60185"}


id: PBO:0073293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 15","termid":"PBO:0073293"}


id: GO:0008661
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H+ + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2.","definition_xrefs":["RHEA:12605","EC:2.2.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016744","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-deoxy-D-xylulose-5-phosphate synthase activity","secondary_identifiers":["MetaCyc:DXS-RXN","KEGG_REACTION:R05636"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"DOXP synthase activity","type":"exact"},{"name":"DXP-synthase activity","type":"exact"},{"name":"pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"related"}],"termid":"GO:0008661"}


id: PBO:0056284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotically associated long non coding RNA","termid":"PBO:0056284"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: PBO:0072182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 9","termid":"PBO:0072182"}


id: PBO:0029477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cerulenin","termid":"PBO:0029477"}


id: PBO:0060838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural precursor cell expressed, developmentally down-regulated 9","termid":"PBO:0060838"}


id: PBO:0040765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3","termid":"PBO:0040765"}


id: GO:0160119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process that is induced by intracellular copper accumulation.","definition_xrefs":["PMID:35298263","PMID:35354936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuproptosis","termid":"GO:0160119"}


id: PBO:0054350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1743","termid":"PBO:0054350"}


id: PBO:0029333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation","termid":"PBO:0029333"}


id: PBO:0041469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 21","termid":"PBO:0041469"}


id: PBO:0084315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase; promotes global demethylation of H3K4 and repression of noncoding intergenic transcription during sporulation; removes methyl groups added by Set1p; negatively regulated by H3K14 acetylation; protein levels regulated by Not4p polyubiquitin-mediated degradation; regulates sporulation timing by extending period of active transcription; regulates rDNA silencing; human homolog is JARID1C","termid":"PBO:0084315"}


id: PBO:0029380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_stress","termid":"PBO:0029380"}


id: MOD:02063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an D-phenylalanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-phenylalanine","termid":"MOD:00201"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked D-phenylalanine residue","synonyms":[{"name":"XlnkDPhe","type":"exact"}],"termid":"MOD:02063"}


id: PBO:0075962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 4","termid":"PBO:0075962"}


id: PBO:0080998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 34","termid":"PBO:0080998"}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: PBO:0042306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule","termid":"PBO:0042306"}


id: GO:0090078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a smooth muscle cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle derived foam cell differentiation","termid":"GO:0090078"}


id: GO:0052748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: baicalin + H2O = baicalein + D-glucuronate.","definition_xrefs":["GOC:mengo_curators","RHEA:28130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"baicalin beta-D-glucuronidase activity","secondary_identifiers":["MetaCyc:RXN-11760","EC:3.2.1.167","KEGG_REACTION:R09533"],"synonyms":[{"name":"5,6,7-trihydroxyflavone-7-O-beta-D-glucupyranosiduronate glucuronosylhydrolase activity","type":"related"},{"name":"baicalinase activity","type":"broad"}],"termid":"GO:0052748"}


id: GO:0061190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sclerotome development","termid":"GO:0061190"}


id: PBO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin binding repeats","termid":"PBO:0003596"}


id: PBO:0047116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 163 member A","termid":"PBO:0047116"}


id: PBO:0089604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosomal large subunit assembly and maintenance","termid":"PBO:0089604"}


id: GO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-dopa = 3,4-dihydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["RHEA:15273","EC:2.6.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dihydroxyphenylalanine transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.49-RXN","KEGG_REACTION:R02077"],"synonyms":[{"name":"3,4-dihydroxy-L-phenylalanine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"DOPA aminotransferase activity","type":"related"},{"name":"L-dopa transaminase activity","type":"related"},{"name":"aspartate-DOPP transaminase (ADT)","type":"related"},{"name":"dihydroxyphenylalanine aminotransferase activity","type":"exact"},{"name":"dopa transaminase activity","type":"related"},{"name":"glutamate-DOPP transaminase (GDT)","type":"related"},{"name":"phenylalanine-DOPP transaminase (PDT)","type":"related"}],"termid":"GO:0047309"}


id: GO:1900051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone exchange (obsolete GO:1900051)","synonyms":[{"name":"activation of histone chaperone","type":"related"},{"name":"activation of histone exchange","type":"related"},{"name":"activation of histone replacement","type":"exact"},{"name":"positive regulation of histone chaperone","type":"related"},{"name":"positive regulation of histone replacement","type":"exact"},{"name":"up regulation of histone chaperone","type":"related"},{"name":"up regulation of histone exchange","type":"related"},{"name":"up regulation of histone replacement","type":"exact"},{"name":"up-regulation of histone chaperone","type":"related"},{"name":"up-regulation of histone exchange","type":"related"},{"name":"up-regulation of histone replacement","type":"exact"},{"name":"upregulation of histone chaperone","type":"related"},{"name":"upregulation of histone exchange","type":"related"},{"name":"upregulation of histone replacement","type":"exact"}],"termid":"GO:1900051"}


id: GO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation","termid":"GO:0030182"}


id: PBO:0013092
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus gtb1","termid":"PBO:0013092"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:19630807","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: PBO:0049442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 19","termid":"PBO:0049442"}


id: GO:0008170
data:
  {"annotated_genes":["SJAG_01958","SJAG_04034","SJAG_02692","SJAG_00769","SJAG_01079","SJAG_02271","SJAG_03548","SJAG_03487","SJAG_03630","SJAG_01146","SJAG_00825","SJAG_03869","SJAG_03949","SJAG_01425","SJAG_02488","SJAG_03228","SJAG_01054","SJAG_04181","SJAG_04574","SJAG_02873","SJAG_03008","SJAG_02281","SJAG_02350","SJAG_02756","SJAG_02821","SJAG_02868","SJAG_00812","SJAG_00286","SJAG_00943","SJAG_01193","SJAG_04159","SJAG_01536","SJAG_00886","SJAG_01482","SJAG_03289","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[77574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[74915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008469"},{"annotations":[73077,105474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[91044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[111613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[111655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[105754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[105755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[105756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[112116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[111859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[96073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008112"},{"annotations":[104578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080101"},{"annotations":[104579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000773"},{"annotations":[76993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004608"},{"annotations":[109949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000234"},{"annotations":[78848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[107868,95888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"},{"annotations":[91062,92026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036009"},{"annotations":[83422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018064"},{"annotations":[75061,76755,92251,77305,83423,73351,77335,110558,74477,111929,112257,72077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016279"},{"annotations":[59535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[90472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[78237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[99541,102608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[102609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[102610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160103"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase 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id: GO:0060029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis contribution to the shaping of an organ.","definition_xrefs":["GOC:dph","PMID:12062082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in organogenesis","termid":"GO:0060029"}


id: PBO:0078849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 4 associated protein","termid":"PBO:0078849"}


id: PBO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC1 like intracellular cholesterol transporter 1","termid":"PBO:0061299"}


id: PBO:0027474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_telomere","termid":"PBO:0027474"}


id: GO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + ATP + UDP-N-acetylmuramate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanine.","definition_xrefs":["RHEA:23372","EC:6.3.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R03193","MetaCyc:UDP-NACMUR-ALA-LIG-RXN"],"synonyms":[{"name":"L-Ala ligase activity","type":"related"},{"name":"L-alanine-adding enzyme activity","type":"related"},{"name":"MurC synthetase activity","type":"narrow"},{"name":"UDP-MurNAc:L-alanine ligase activity","type":"related"},{"name":"UDP-N-acetylmuramate:L-alanine ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramyl:L-alanine ligase activity","type":"related"},{"name":"UDP-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"UDPMurNAc-L-alanine synthetase activity","type":"related"},{"name":"alanine-adding enzyme activity","type":"related"},{"name":"uridine 5'-diphosphate-N-acetylmuramyl-L-alanine synthetase activity","type":"related"},{"name":"uridine diphosphate N-acetylmuramate:L-alanine ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanine synthetase activity","type":"related"},{"name":"uridine-diphosphate-N-acetylmuramate:L-alanine ligase activity","type":"related"}],"termid":"GO:0008763"}


id: PBO:0076682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 1","termid":"PBO:0076682"}


id: PBO:0038649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA oxidase like","termid":"PBO:0038649"}


id: GO:0089722
data:
  {"annotated_genes":["SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75742,88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpytuvate across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transport","termid":"GO:0015714"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0089722","terms_by_termid":{"GO:1990536":null}}


id: GO:1902570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a nucleolus.","definition_xrefs":["PMID:22809626","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleolus","synonyms":[{"name":"protein localisation in nucleolus","type":"exact"},{"name":"protein localisation to nucleolus","type":"exact"},{"name":"protein localization in nucleolus","type":"exact"}],"termid":"GO:1902570"}


id: PBO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_initiation_of_premeiotic_DNA_replication","termid":"PBO:0031592"}


id: GO:0043100
data:
  {"annotated_genes":["SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"Any process that generates pyrimidine nucleobases, 1,3-diazine organic nitrogenous bases, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleobase salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine base salvage","type":"exact"}],"termid":"GO:0043100","terms_by_termid":{"GO:0006223":null}}


id: GO:0043858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arginine(out) + ornithine(in) = arginine(in) + ornithine(out).","definition_xrefs":["GOC:jl","PMID:17110979","RHEA:34991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"arginine:ornithine antiporter activity","synonyms":[{"name":"ArcD","type":"related"},{"name":"arginine-ornithine antiporter activity","type":"exact"},{"name":"arginine/ornithine antiporter activity","type":"exact"}],"termid":"GO:0043858"}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: PBO:0068953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 197, pseudogene","termid":"PBO:0068953"}


id: PBO:0090478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Enp2","termid":"PBO:0090478"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: PBO:0056726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MER proto-oncogene, tyrosine kinase","termid":"PBO:0056726"}


id: PBO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine induced apoptosis inhibitor 1","termid":"PBO:0043120"}


id: GO:1902733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte that will contribute to the growth of a bone. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation involved in endochondral bone morphogenesis","termid":"GO:1902738"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte differentiation","termid":"GO:0003418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte differentiation","termid":"GO:1902733"}


id: GO:0014019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a neuroblast over time, from initial commitment of the cell to a specific state, to the mature neuroblast. It does not include processes where the neuroblast turns into a glial cell or a neuron.","definition_xrefs":["GOC:ef","ISBN:0878932585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"neuroblast differentiation","termid":"GO:0014016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast development","termid":"GO:0014019"}


id: GO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a receptor in a second organism.","definition_xrefs":["PMID:8405712","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"},{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor activity in another organism","synonyms":[{"name":"positive regulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044507"}


id: PBO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 175","termid":"PBO:0042103"}


id: PBO:0067540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 685, pseudogene","termid":"PBO:0067540"}


id: MOD:00796
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-ornithine.","definition_xrefs":["PubMed:15489230","OMSSA:163","Unimod:372","DeltaMass:129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine (Arg)","synonyms":[{"name":"Arg->Orn","type":"related"},{"name":"Ornithine (from Arginine)","type":"exact"},{"name":"Ornithine from Arginine","type":"related"},{"name":"Ornithyl","type":"exact"},{"name":"arg2orn","type":"exact"}],"termid":"MOD:00796"}


id: GO:0016051
data:
  {"annotated_genes":["SJAG_00218","SJAG_01531","SJAG_04509","SJAG_02222","SJAG_04878","SJAG_04073","SJAG_04483","SJAG_05285","SJAG_01012","SJAG_00963","SJAG_03705","SJAG_01209","SJAG_00424","SJAG_04184","SJAG_01862","SJAG_04236","SJAG_04666","SJAG_02590","SJAG_02916","SJAG_04771","SJAG_04668","SJAG_01646","SJAG_02446","SJAG_00182","SJAG_01963","SJAG_00183","SJAG_00409","SJAG_04462","SJAG_00610","SJAG_01028","SJAG_00876","SJAG_03057","SJAG_00129","SJAG_01427","SJAG_01288","SJAG_01453","SJAG_01376","SJAG_01426","SJAG_01787","SJAG_02278","SJAG_03587","SJAG_01835","SJAG_01290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74589,75892,97880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96077,88929,78238,90811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[90048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[104596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[71586,77575,73108,70801,72925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[87219,83830,103110,108360,104598,87228,101459,110941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[89574,101850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[104202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[76131,77794],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[83284,88032],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83662],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[112968,100703,88018,86445,98262],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[88038,98264,90504,85156],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[77755,78025,78476,75253,104203,73583,74005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"organic substance biosynthetic process","termid":"GO:1901576"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00183":null,"SJAG_00218":null,"SJAG_00409":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01012":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01427":null,"SJAG_01453":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01862":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"carbohydrate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006093"],"synonyms":[{"name":"anabolic carbohydrate metabolic process","type":"exact"},{"name":"anabolic carbohydrate metabolism","type":"exact"},{"name":"carbohydrate anabolism","type":"exact"},{"name":"carbohydrate biosynthesis","type":"exact"},{"name":"carbohydrate formation","type":"exact"},{"name":"carbohydrate synthesis","type":"exact"}],"termid":"GO:0016051","terms_by_termid":{"GO:0005978":null,"GO:0005992":null,"GO:0006078":null,"GO:0006114":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0066251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein X-linked","termid":"PBO:0066251"}


id: GO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.","definition_xrefs":["PMID:20729380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lytic vacuole organization","synonyms":[{"name":"lytic vacuolar assembly","type":"narrow"},{"name":"lytic vacuole biogenesis","type":"related"},{"name":"lytic vacuole organisation","type":"exact"},{"name":"lytic vacuole organization and biogenesis","type":"related"}],"termid":"GO:0080171"}


id: PATO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000264 absolute visual_ability (obsolete PATO:0000264)","termid":"PATO:0000264"}


id: PBO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Gef1","termid":"PBO:0000383"}


id: PBO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 1","termid":"PBO:0046453"}


id: PBO:0049266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gasdermin E","termid":"PBO:0049266"}


id: PBO:0086588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis; YLR156W has a paralog, YLR159W, that arose from a segmental duplication","termid":"PBO:0086588"}


id: GO:0051685
data:
  {"annotated_genes":["SJAG_03170","SJAG_04221","SJAG_00053","SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86097,99773],"is_not":false,"summary":null,"term":"GO:0051685"},{"annotations":[102370,110346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which the endoplasmic reticulum is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of ER location","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of ER localization","type":"related"},{"name":"maintenance of endoplasmic reticulum localization","type":"exact"}],"termid":"GO:0051685","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0053585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 608","termid":"PBO:0053585"}


id: GO:0031772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 orexin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orexin receptor binding","termid":"GO:0042324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 2 orexin receptor binding","synonyms":[{"name":"OX2 orexin receptor binding","type":"exact"},{"name":"type 2 hypocretin receptor binding","type":"exact"},{"name":"type 2 hypocretin receptor ligand","type":"narrow"}],"termid":"GO:0031772"}


id: PBO:0030025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_adhesion","termid":"PBO:0030025"}


id: PBO:0089706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dom34-Hbs1 translation release factor complex GTPase subunit Hbs1","termid":"PBO:0089706"}


id: GO:0098827
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id: GO:0061587
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id: GO:0009750
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id: GO:0032557
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id: PBO:0030470
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id: PBO:0067176
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id: PBO:0065319
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id: PBO:0002653
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id: PBO:0087147
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id: PBO:0016885
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id: _global:interaction_genotype_b
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id: SO:0001890
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id: PBO:0058745
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id: PBO:0033824
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id: PR:O13958
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id: PBO:0050005
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id: PBO:0074035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 21","termid":"PBO:0074035"}


id: PBO:0052047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KN motif and ankyrin repeat domains 3","termid":"PBO:0052047"}


id: SO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA or RNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aptamer","secondary_identifiers":["http://en.wikipedia.org/wiki/Aptamer"],"termid":"SO:0000031"}


id: GO:0031025
data:
  {"annotated_genes":["SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97751],"is_not":false,"summary":null,"term":"GO:0031025"}]},"cv_name":"biological_process","definition":"The process in which the equatorial microtubule organizing center is disassembled at the end of mitosis.","definition_xrefs":["GOC:mah","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"equatorial microtubule organization","termid":"GO:0031121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"equatorial microtubule organizing center disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equatorial microtubule organising center disassembly","type":"exact"}],"termid":"GO:0031025","terms_by_termid":{"GO:0031025":null}}


id: GO:0032340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inhibin secretion","termid":"GO:0032338"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"positively_regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inhibin secretion","synonyms":[{"name":"activation of inhibin secretion","type":"narrow"},{"name":"stimulation of inhibin secretion","type":"narrow"},{"name":"up regulation of inhibin secretion","type":"exact"},{"name":"up-regulation of inhibin secretion","type":"exact"},{"name":"upregulation of inhibin secretion","type":"exact"}],"termid":"GO:0032340"}


id: GO:0047426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + ricinine = NH3 + 3-carboxy-4-methoxy-N-methyl-2-pyridone.","definition_xrefs":["MetaCyc:3.5.5.2-RXN","EC:3.5.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"ricinine nitrilase activity","secondary_identifiers":["RHEA:22704"],"synonyms":[{"name":"ricinine aminohydrolase activity","type":"related"}],"termid":"GO:0047426"}


id: GO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubulin deacetylation","termid":"GO:0090042"}


id: PBO:0109118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 18, RPL3 N3(tau)-histidine","termid":"PBO:0109118"}


id: PBO:0038680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 5 pseudogene 1","termid":"PBO:0038680"}


id: GO:0060684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling","synonyms":[{"name":"epithelial-mesenchymal cell signalling","type":"exact"}],"termid":"GO:0060684"}


id: PBO:0052433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 1","termid":"PBO:0052433"}


id: GO:1902619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule minus-end binding.","definition_xrefs":["GOC:di","GO_REF:0000059","GOC:TermGenie","PMID:22939623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule binding","termid":"GO:1904526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule minus-end binding","termid":"GO:1902619"}


id: PBO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030338"}


id: PBO:0069601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 878, pseudogene","termid":"PBO:0069601"}


id: PBO:0029386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029386"}


id: GO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: substrate + ATP = substrate-AMP + diphosphate.","definition_xrefs":["PMID:12084835"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate forming enzyme activity (obsolete GO:0009984)","synonyms":[{"name":"adenylate forming enzyme activity","type":"exact"}],"termid":"GO:0009984"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: GO:0035267
data:
  {"annotated_genes":["SJAG_00783","SJAG_04793","SJAG_02385","SJAG_00187","SJAG_03145","SJAG_03628","SJAG_03579","SJAG_05282","SJAG_01385","SJAG_04613","SJAG_01016","SJAG_03230","SJAG_03792","SJAG_00349","SJAG_02990","SJAG_04097"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72778,73372,73458,76683,77632,86368,87988,89603,94461,99439,100100,102222,104358,108342,110714,113592],"is_not":false,"summary":null,"term":"GO:0035267"}]},"cv_name":"cellular_component","definition":"A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).","definition_xrefs":["PMID:14966270","GOC:ecd","PMID:10966108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4/H2A histone acetyltransferase complex","termid":"GO:0043189"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_02385":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"TIP60 histone acetylase complex","type":"exact"},{"name":"TIP60 histone acetyltransferase complex","type":"exact"}],"termid":"GO:0035267","terms_by_termid":{"GO:0035267":null}}


