# terms

id: PR:P40998
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- thi2 gene.","definition_xrefs":["UniProtKB:P40998","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine thiazole synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.01","synonyms":[{"name":"Spom972h-thi2","type":"exact"},{"name":"thiazole biosynthetic enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40998"}


id: PBO:0061754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nyctalopin","termid":"PBO:0061754"}


id: PBO:0059930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 16","termid":"PBO:0059930"}


id: GO:0045921
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95644],"is_not":false,"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of exocytosis","type":"narrow"},{"name":"stimulation of exocytosis","type":"narrow"},{"name":"up regulation of exocytosis","type":"exact"},{"name":"up-regulation of exocytosis","type":"exact"},{"name":"upregulation of exocytosis","type":"exact"}],"termid":"GO:0045921","terms_by_termid":{"GO:0045921":null}}


id: GO:0044150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of an organism from an initial condition to a later condition, occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete development of host on or near symbiont surface (obsolete GO:0044150)","synonyms":[{"name":"development of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044150"}


id: PBO:0091773
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CDC6","termid":"PBO:0091773"}


id: GO:0070326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a very-low-density lipoprotein receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"very-low-density lipoprotein particle receptor binding","synonyms":[{"name":"VLDL receptor binding","type":"exact"},{"name":"VLDLR binding","type":"exact"},{"name":"apolipoprotein E receptor binding","type":"related"},{"name":"very-low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0070326"}


id: GO:0009185
data:
  {"annotated_genes":["SJAG_06621","SJAG_00839","SJAG_03977","SJAG_02945","SJAG_02009","SJAG_03828","SJAG_04849","SJAG_02038","SJAG_04495","SJAG_00885","SJAG_04665","SJAG_03852","SJAG_03903","SJAG_03676","SJAG_00461","SJAG_02135","SJAG_03373","SJAG_00633","SJAG_02107","SJAG_02369","SJAG_00685","SJAG_05314","SJAG_03660","SJAG_04334","SJAG_00027","SJAG_00605","SJAG_06622","SJAG_04192","SJAG_01310","SJAG_00779","SJAG_04048","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[93516,104688,90109,90579,76796,104684,104685,104687,100816,104683,101180,100815,100814,93781,104689,98784,111476,101181,99045,104686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[78838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[102595,88048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[64430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[84349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[106814,93701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[72760,75430],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[108501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[78842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[75499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"synonyms":[{"name":"ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009185","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0006256":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null}}


id: GO:1902091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fumagillin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of fumagillin biosynthetic process","termid":"GO:1902090"},{"relation_name":"negatively_regulates","term_name":"fumagillin biosynthetic process","termid":"GO:1902086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fumagillin biosynthetic process","synonyms":[{"name":"down regulation of fumagillin anabolism","type":"exact"},{"name":"down regulation of fumagillin biosynthesis","type":"exact"},{"name":"down regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down regulation of fumagillin formation","type":"exact"},{"name":"down regulation of fumagillin synthesis","type":"exact"},{"name":"down-regulation of fumagillin anabolism","type":"exact"},{"name":"down-regulation of fumagillin biosynthesis","type":"exact"},{"name":"down-regulation of fumagillin biosynthetic process","type":"exact"},{"name":"down-regulation of fumagillin formation","type":"exact"},{"name":"down-regulation of fumagillin synthesis","type":"exact"},{"name":"downregulation of fumagillin anabolism","type":"exact"},{"name":"downregulation of fumagillin biosynthesis","type":"exact"},{"name":"downregulation of fumagillin biosynthetic process","type":"exact"},{"name":"downregulation of fumagillin formation","type":"exact"},{"name":"downregulation of fumagillin synthesis","type":"exact"},{"name":"inhibition of fumagillin anabolism","type":"exact"},{"name":"inhibition of fumagillin biosynthesis","type":"exact"},{"name":"inhibition of fumagillin biosynthetic process","type":"narrow"},{"name":"inhibition of fumagillin formation","type":"exact"},{"name":"inhibition of fumagillin synthesis","type":"exact"},{"name":"negative regulation of fumagillin anabolism","type":"exact"},{"name":"negative regulation of fumagillin biosynthesis","type":"exact"},{"name":"negative regulation of fumagillin formation","type":"exact"},{"name":"negative regulation of fumagillin synthesis","type":"exact"}],"termid":"GO:1902091"}


id: GO:1990117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:rl","PMID:15214043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor signaling pathway","termid":"GO:0050853"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"},{"relation_name":"part_of","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"B cell receptor apoptotic signaling pathway","synonyms":[{"name":"B cell receptor extrinsic apoptotic signaling pathway","type":"exact"},{"name":"extrinsic apoptotic signaling pathway via B cell antigen receptor","type":"related"},{"name":"extrinsic apoptotic signaling pathway via BCR","type":"related"}],"termid":"GO:1990117"}


id: GO:0001514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation; it is not a posttranslational modification of peptidyl-cysteine.","definition_xrefs":["RESID:AA0022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational readthrough","termid":"GO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"selenocysteine incorporation","termid":"GO:0001514"}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: PBO:0069364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 624, pseudogene","termid":"PBO:0069364"}


id: PBO:0031291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_growth_phenotype","termid":"PBO:0031291"}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["GOC:jl","CL:0000537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: PR:Q09928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01762","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.05c","secondary_identifiers":["UniProtKB:Q09928"],"synonyms":[{"name":"PPIase cyp8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIL2","type":"exact"},{"name":"rotamase cyp8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09928"}


id: PBO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase (predicted)","termid":"PBO:0000093"}


id: GO:0019801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cyclization of asparagine to yield an L-aspartimide (otherwise known as alpha-aminosuccinimide) residue at the C-terminus of an excised intein during protein splicing.","definition_xrefs":["RESID:AA0302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"part_of","term_name":"intein-mediated protein splicing","termid":"GO:0016539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0051604","GO:0044281","GO:0010467"],"is_obsolete":false,"name":"cyclization of asparagine involved in intein-mediated protein splicing","synonyms":[{"name":"cyclization of asparagine, during protein splicing","type":"related"}],"termid":"GO:0019801"}


id: PBO:0047491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase pseudogene 1","termid":"PBO:0047491"}


id: GO:0097067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: GO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol + ATP = 1-amino-1-deoxy-scyllo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.65","RHEA:18605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"scyllo-inosamine 4-kinase activity","secondary_identifiers":["MetaCyc:SCYLLO-INOSAMINE-KINASE-RXN","KEGG_REACTION:R03384"],"synonyms":[{"name":"ATP:1-amino-1-deoxy-scyllo-inositol 4-phosphotransferase activity","type":"related"},{"name":"ATP:inosamine phosphotransferase activity","type":"related"},{"name":"scyllo-inosamine kinase (phosphorylating)","type":"related"},{"name":"scyllo-inosamine kinase activity","type":"exact"}],"termid":"GO:0050276"}


id: GO:0030339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain-acyl ethyl ester + H2O = a long-chain carboxylic acid + ethanol.","definition_xrefs":["EC:3.1.1.67"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fatty-acyl-ethyl-ester synthase activity","secondary_identifiers":["RHEA:16641","MetaCyc:FATTY-ACYL-ETHYL-ESTER-SYNTHASE-RXN"],"synonyms":[{"name":"FAEE synthase activity","type":"related"},{"name":"FAEES activity","type":"related"},{"name":"fatty-acyl ethyl ester synthase","type":"exact"},{"name":"long-chain-fatty-acyl-ethyl-ester acylhydrolase activity","type":"related"}],"termid":"GO:0030339"}


id: GO:0097385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death occurring as a result of a starvation stimulus (deprivation of nourishment).","definition_xrefs":["GOC:pg","GOC:mtg_apoptosis","PMID:13679856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death in response to starvation","synonyms":[{"name":"necrotic cell death in response to starvation","type":"broad"}],"termid":"GO:0097385"}


id: PBO:0065770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI, KH domain containing RNA binding","termid":"PBO:0065770"}


id: PBO:0031423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_population_phenotype","termid":"PBO:0031423"}


id: PBO:0109970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rieske iron-sulfur protein, ubiquinol-cytochrome-c reductase complex subunit 5, Rip1","termid":"PBO:0109970"}


id: PR:O43079
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1 complex subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02550","PANTHER:PTHR11134:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit beta-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.02","secondary_identifiers":["UniProtKB:O43079"],"synonyms":[{"name":"Spom972h-AP1B1","type":"exact"},{"name":"beta(1)-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 1 beta-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43079"}


id: PBO:0051094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 4","termid":"PBO:0051094"}


id: GO:0007095
data:
  {"annotated_genes":["SJAG_02563","SJAG_01429","SJAG_01205","SJAG_02576","SJAG_00364","SJAG_05373","SJAG_02771","SJAG_00640","SJAG_01873","SJAG_03942","SJAG_01146","SJAG_04671","SJAG_02266","SJAG_01680","SJAG_02098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71973,74652,78080,84847,85910,87070,87424,94848,95996,96513,101969,104612,106961,112113,112778],"is_not":false,"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle checkpoint that detects and negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PMID:16299494","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03942":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:1902506","GO:0031572","GO:0072434","GO:1902505","GO:0072425","GO:1902504"],"synonyms":[{"name":"G2 DNA damage checkpoint","type":"related"},{"name":"G2/M transition DNA damage checkpoint","type":"exact"},{"name":"down regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"down-regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"inhibition of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"negative regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"negative regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"positive regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2 DNA damage checkpoint","type":"narrow"},{"name":"regulation of signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"narrow"},{"name":"signal transduction involved in G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in G2/M transition DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2 DNA damage checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0007095","terms_by_termid":{"GO:0007095":null}}


id: GO:0060492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of two or more cells or tissues that causes the cells of the foregut to change their fates and specify the development of the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ induction","termid":"GO:0001759"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"is_a","term_name":"regulation of branching involved in lung morphogenesis","termid":"GO:0061046"},{"relation_name":"positively_regulates","term_name":"lung field specification","termid":"GO:0060424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung induction","termid":"GO:0060492"}


id: PBO:0053884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1164","termid":"PBO:0053884"}


id: PBO:0027896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_siRNA_level","termid":"PBO:0027896"}


id: GO:0018424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This modification produces peptidyl-glutamic acid poly-ADP-ribose found in a number of nuclear proteins under certain conditions including the repair of single strand DNA breaks. The activated form of the generating enzyme poly(ADP-ribose) polymerase is itself modified in this way.","definition_xrefs":["RESID:AA0295"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-glutamic acid poly-ADP-ribosylation (obsolete GO:0018424)","termid":"GO:0018424"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: GO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"alkane catabolic process","synonyms":[{"name":"alkane breakdown","type":"exact"},{"name":"alkane catabolism","type":"exact"},{"name":"alkane degradation","type":"exact"}],"termid":"GO:0043448"}


id: PBO:0065702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 upregulated regulator of p53 levels","termid":"PBO:0065702"}


id: PBO:0047630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL1 interacting regulator of recombination and mitosis","termid":"PBO:0047630"}


id: PBO:0054994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2409","termid":"PBO:0054994"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: PBO:0041724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IG","termid":"PBO:0041724"}


id: PBO:0058221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4511","termid":"PBO:0058221"}


id: GO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.","definition_xrefs":["EC:2.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"cyclopropane-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["RHEA:11988","MetaCyc:2.1.1.79-RXN"],"synonyms":[{"name":"CFA synthase activity","type":"related"},{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (cyclizing)","type":"related"},{"name":"cyclopropane fatty acid synthase activity","type":"related"},{"name":"cyclopropane fatty acid synthetase activity","type":"related"},{"name":"cyclopropane synthase activity","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0008825"}


id: PBO:0030269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_elongated_cell","termid":"PBO:0030269"}


id: PBO:0034285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dendrite_synapsed_in","termid":"PBO:0034285"}


id: PBO:0040528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-2-microglobulin","termid":"PBO:0040528"}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: PBO:0064370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 2","termid":"PBO:0064370"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of NAD+ kinase activity","termid":"GO:0033670"},{"relation_name":"is_a","term_name":"positive regulation of kinase activity","termid":"GO:0033674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD+ kinase activity","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: PBO:0039803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 1","termid":"PBO:0039803"}


id: GO:0071457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ozone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ozone","termid":"GO:0010193"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ozone","termid":"GO:0071457"}


id: PR:Q09140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose:glycoprotein glucosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02557","PRO:DNx","PANTHER:PTHR11226:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.06","secondary_identifiers":["UniProtKB:Q09140"],"synonyms":[{"name":"Spom972h-UGGT1","type":"exact"},{"name":"UDP--Glc:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UGT (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09140"}


id: PBO:0087993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD2 has a paralog, TCD1, that arose from the whole genome duplication","termid":"PBO:0087993"}


id: PBO:0064534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit K pseudogene 2","termid":"PBO:0064534"}


id: PBO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intracellular_endoparasite_of","termid":"PBO:0034199"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: GO:0042948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"salicin transport","termid":"GO:0042948"}


id: SO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The residue at an extremity of the sequence is not the terminal residue.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_terminal_residue","secondary_identifiers":["BS:00072"],"synonyms":[{"name":"non terminal","type":"exact"},{"name":"non_ter","type":"exact"}],"termid":"SO:0001084"}


id: PBO:0004924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic nuclear protein implicated in meiotic chromosome segregation","termid":"PBO:0004924"}


id: GO:0005628
data:
  {"annotated_genes":["SJAG_03536","SJAG_00821","SJAG_03483","SJAG_00971","SJAG_02076","SJAG_01697","SJAG_01855","SJAG_04483","SJAG_00405","SJAG_03915","SJAG_04922","SJAG_03746","SJAG_03250","SJAG_00430","SJAG_04001","SJAG_04080","SJAG_02169","SJAG_00974","SJAG_02736","SJAG_04948","SJAG_02368","SJAG_04781","SJAG_01469","SJAG_00826","SJAG_03587","SJAG_04275","SJAG_04184","SJAG_03079","SJAG_03145","SJAG_03721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83964,86398,86930,87133,88491,89162,89461,90047,90926,92172,93069,96305,96940,97154,98655,98703,99573,100335,102718,104360,104594,109259,111367,112025,112583,114021],"is_not":false,"summary":null,"term":"GO:0005628"},{"annotations":[113562,94330,98326],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[98327,100645,113563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The prospore membrane is a double-membraned structure that extends from the cytoplasmic face of the spindle pole bodies to encompass the spindle pole bodies and the four nuclear lobes that are formed during meiosis. It helps isolate the meiotic nuclei from the cytoplasm during spore formation and serves as a foundation for the formation of the spore walls. An example of this component is found in Schizosaccharomyces pombe.","definition_xrefs":["ISBN:0879693649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01855":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM","type":"exact"},{"name":"ascospore-type prospore membrane","type":"exact"},{"name":"forespore membrane","type":"related"}],"termid":"GO:0005628","terms_by_termid":{"GO:0005628":null,"GO:0070056":null,"GO:0070057":null}}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: PBO:0062804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 3","termid":"PBO:0062804"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: PBO:0055917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A5, pseudogene","termid":"PBO:0055917"}


id: FYPO:0002659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is higher than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular trehalose 6-phosphate level","termid":"FYPO:0002658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"increased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"increased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"increased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"increased trehalose 6-phosphate accumulation during heat shock","type":"related"}],"termid":"FYPO:0002659"}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["VZ:1536","UniProtKB-KW:KW-1187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: PR:Q10330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L25-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.18","synonyms":[{"name":"Spom972h-rpl2501","type":"exact"}],"termid":"PR:Q10330"}


id: GO:1905817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dorsal/ventral axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:18434533","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"is_a","term_name":"regulation of dorsal/ventral axon guidance","termid":"GO:1905815"},{"relation_name":"positively_regulates","term_name":"dorsal/ventral axon guidance","termid":"GO:0033563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dorsal/ventral axon guidance","synonyms":[{"name":"activation of dorsal-ventral axon guidance","type":"narrow"},{"name":"activation of dorsal/ventral axon guidance","type":"narrow"},{"name":"activation of dorsal/ventral axon pathfinding","type":"narrow"},{"name":"activation of dorsoventral axon guidance","type":"narrow"},{"name":"positive regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"positive regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"positive regulation of dorsoventral axon guidance","type":"exact"},{"name":"up regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"up regulation of dorsal/ventral axon guidance","type":"exact"},{"name":"up regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"up regulation of dorsoventral axon guidance","type":"exact"},{"name":"up-regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"up-regulation of dorsal/ventral axon guidance","type":"exact"},{"name":"up-regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"up-regulation of dorsoventral axon guidance","type":"exact"},{"name":"upregulation of dorsal-ventral axon guidance","type":"exact"},{"name":"upregulation of dorsal/ventral axon guidance","type":"exact"},{"name":"upregulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"upregulation of dorsoventral axon guidance","type":"exact"}],"termid":"GO:1905817"}


id: PBO:0109121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoside hydrolase family protein Ghs2","termid":"PBO:0109121"}


id: PBO:0085873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identical to the C-terminal 119 amino acid residues of the MATalpha2 protein; a2 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0085873"}


id: GO:0046773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation termination of host mRNAs. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host translation termination","synonyms":[{"name":"suppression by virus of host translation termination","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthesis","type":"narrow"},{"name":"viral inhibition of termination of host cell protein biosynthetic process","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthesis","type":"narrow"},{"name":"viral suppression of termination by host of host cell protein biosynthetic process","type":"narrow"}],"termid":"GO:0046773"}


id: PBO:0029842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029842"}


id: PBO:0073646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sigma non-opioid intracellular receptor 1","termid":"PBO:0073646"}


id: GO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"calcium-dependent protein kinase activity","termid":"GO:0010857"}


id: PATO:0002519
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having an open, latticed, or porous structure; used especially of bone.","definition_xrefs":["TheFreeDictionary:cancellous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancellous","termid":"PATO:0002519"}


id: GO:0005828
data:
  {"annotated_genes":["SJAG_00918"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"}]},"cv_name":"cellular_component","definition":"Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle microtubule","termid":"GO:0005876"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"kinetochore microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pole-to-kinetochore microtubule","type":"exact"}],"termid":"GO:0005828","terms_by_termid":{"GO:1990941":null}}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: FYPO:0001718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malonic acid import","termid":"FYPO:0001717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased malonic acid import","synonyms":[{"name":"decreased malonate import","type":"related"},{"name":"decreased malonic acid import across plasma membrane","type":"exact"},{"name":"decreased malonic acid import during mitotic cell cycle","type":"related"},{"name":"decreased malonic acid import during vegetative growth","type":"exact"},{"name":"decreased malonic acid import into cell","type":"exact"},{"name":"decreased malonic acid uptake","type":"exact"},{"name":"reduced malonic acid import","type":"exact"}],"termid":"FYPO:0001718"}


id: PBO:0038386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-epiphyte_of","termid":"PBO:0038386"}


id: PBO:0084825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein required for assembly of cytochrome bc1 complex; interacts with the Cbp3p-Cbp6p complex and newly synthesized cytochrome b (Cobp) to promote assembly of Cobp into the cytochrome bc1 complex","termid":"PBO:0084825"}


id: PBO:0052178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 9","termid":"PBO:0052178"}


id: PBO:0002853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho-type GTPase activating protein Rga3","termid":"PBO:0002853"}


id: MOD:00180
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-sulfo-L-cysteine.","definition_xrefs":["PubMed:643076","PubMed:14752058","RESID:AA0171","Unimod:40#C","PubMed:12876326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 182.96-182.98 Da","termid":"MOD:00777"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-sulfo-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-(sulfosulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(sulfothio)propanoic acid","type":"exact"},{"name":"3-(sulfosulfanyl)-L-alanine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"S-sulfo-L-cysteine","type":"exact"},{"name":"S-sulfocysteine","type":"exact"},{"name":"SSulfCys","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"cysteine sulfate thioester","type":"exact"},{"name":"cysteine-S-sulfonic acid","type":"exact"}],"termid":"MOD:00180"}


id: PBO:0043015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKB divergent transcript","termid":"PBO:0043015"}


id: GO:0005888
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a plasma membrane and consisting of proteoglycan. Also refers to the state of being buried in the bilayer with no exposure outside the bilayer.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteoglycan integral to plasma membrane (obsolete GO:0005888)","synonyms":[{"name":"proteoglycan integral to plasma membrane","type":"exact"}],"termid":"GO:0005888"}


id: PR:Q09670
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase C5H10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.04","synonyms":[{"name":"Old yellow enzyme homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC5H10.04","type":"exact"}],"termid":"PR:Q09670"}


id: GO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glutamine(out) -> ADP + phosphate + glutamine(in).","definition_xrefs":["EC:7.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled L-glutamine transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-12-RXN"],"synonyms":[{"name":"ATPase-coupled glutamine transmembrane transporter activity","type":"broad"},{"name":"glutamine porter activity","type":"broad"},{"name":"glutamine-importing ATPase activity","type":"related"}],"termid":"GO:0015599"}


id: FYPO:0003140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003140)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003140"}


id: GO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An angiotensin receptor activity that acts via Gi protein coupling and cGMP (NO) generation, and may also act via additional signaling mechanisms.","definition_xrefs":["GOC:mah","PMID:10977869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor activity","termid":"GO:0001595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"angiotensin type II receptor activity","termid":"GO:0004945"}


id: FYPO:0005649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased duration of protein localization to telomere","synonyms":[{"name":"increased duration of protein localisation to telomere","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region","type":"exact"},{"name":"increased duration of protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to telomere during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomeric region","type":"exact"},{"name":"prolonged protein localization to telomere","type":"exact"}],"termid":"FYPO:0005649"}


id: GO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Association of oocytes with supporting epithelial granulosa cells to form primordial follicles.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle endowment","termid":"GO:0001551"}


id: GO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquires specialized structural and functions of a neuroendocrine cell of the prostate gland acinus.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation involved in prostate gland acinus development","termid":"GO:0060531"}


id: PBO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM151A pseudogene 1","termid":"PBO:0047099"}


id: PBO:0012831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40","termid":"PBO:0012831"}


id: GO:0043945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the formation of a cellular spore derived from the products of mitosis.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"is_a","term_name":"positive regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0045881"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"}


id: PBO:0039334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha kinase 1","termid":"PBO:0039334"}


id: PBO:0047718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 9, pseudogene","termid":"PBO:0047718"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: GO:0052466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052466)","synonyms":[{"name":"modulation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"modulation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052466"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: PBO:0055198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2623","termid":"PBO:0055198"}


id: GO:1900200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephros development.","definition_xrefs":["GOC:mtg_apoptosis","PMID:17314325","GOC:TermGenie","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900200"}


id: PBO:0083928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional ortholog of human PIG-V; PIG-V is a mannosyltransferase that transfers the second mannose in glycosylphosphatidylinositol biosynthesis; the authentic, non-tagged protein was localized to mitochondria","termid":"PBO:0083928"}


id: PBO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transmitted_by","termid":"PBO:0034374"}


id: SO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has an asparagine anticodon, and a 3' asparagine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"asparagine_tRNA_primary_transcript","termid":"SO:0000213"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparaginyl_tRNA","synonyms":[{"name":"asparaginyl tRNA","type":"exact"},{"name":"asparaginyl-transfer RNA","type":"exact"},{"name":"asparaginyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000256"}


id: GO:1905327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the tracheoesophageal septum. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GO_REF:0000081","GOC:TermGenie","PMID:9731532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheoesophageal septum formation","synonyms":[{"name":"esophagotracheal septum formation","type":"exact"},{"name":"tracheoesophageal ridges formation","type":"related"}],"termid":"GO:1905327"}


id: PBO:0051966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 2","termid":"PBO:0051966"}


id: FYPO:0003827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is decreased.","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"decreased ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased ribosome S6 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced ribosomal S6 protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003827"}


id: PBO:0079826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ULK4 pseudogene 1","termid":"PBO:0079826"}


id: GO:0045828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving isoprenoid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of isoprenoid metabolic process","synonyms":[{"name":"activation of isoprenoid metabolic process","type":"narrow"},{"name":"positive regulation of isoprenoid metabolism","type":"exact"},{"name":"stimulation of isoprenoid metabolic process","type":"narrow"},{"name":"up regulation of isoprenoid metabolic process","type":"exact"},{"name":"up-regulation of isoprenoid metabolic process","type":"exact"},{"name":"upregulation of isoprenoid metabolic process","type":"exact"}],"termid":"GO:0045828"}


id: GO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate; drives the transport of proteins into the chloroplast stroma.","definition_xrefs":["EC:7.4.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloroplast protein-transporting ATPase activity","secondary_identifiers":["MetaCyc:3.6.3.52-RXN"],"synonyms":[{"name":"AAA chloroplast protein-transporting ATPase","type":"exact"},{"name":"ATPase-coupled chloroplast protein transporter activity","type":"exact"}],"termid":"GO:0016464"}


id: PBO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 15","termid":"PBO:0072389"}


id: GO:0007505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adult fat body over time, from its formation to the mature structure. Larval fat body cells that remain at eclosion degenerate in the first 2 to 4 days of adult life, leaving behind the smaller cells of the adult fat body.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat body development","termid":"GO:0007503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult fat body development","termid":"GO:0007505"}


id: GO:0014071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloalkane stimulus. A cycloalkane is a cyclic saturated hydrocarbon having the general formula CnH2n.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cycloalkane","termid":"GO:0014071"}


id: PBO:0066320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring-box 1","termid":"PBO:0066320"}


id: PBO:0049529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AZ2 pseudogene 1","termid":"PBO:0049529"}


id: GO:0015480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Secretins are Gram-negative bacterial outer membrane proteins that form multimeric pores through which macromolecules, usually proteins, can pass. Form homomultimeric ring structures, 10-20 subunits per complex, with large central pores (inner diameters of 5-10 nm).","definition_xrefs":["TC:1.B.22.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin (sensu Bacteria) (obsolete GO:0015480)","synonyms":[{"name":"secretin (sensu Bacteria)","type":"exact"}],"termid":"GO:0015480"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000631","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: GO:0044462
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an external encapsulating structure, a structure that lies outside the plasma membrane and surrounds the entire cell. This does not include the periplasmic space but does include the outer membrane (of gram negative bacteria) or cell wall (of yeast or Gram positive bacteria).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete external encapsulating structure part (obsolete GO:0044462)","termid":"GO:0044462"}


id: PBO:0038462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 2","termid":"PBO:0038462"}


id: PATO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elevation which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased position","termid":"PATO:0001476"},{"relation_name":"is_a","term_name":"elevation","termid":"PATO:0001687"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elevation","synonyms":[{"name":"low elevation","type":"exact"}],"termid":"PATO:0001689"}


id: PBO:0083463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene LCB4","termid":"PBO:0083463"}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: GO:1903069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GOC:rph","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903069)","termid":"GO:1903069"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_02261","SJAG_01119","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73182,73912,91703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-110243","Reactome:R-HSA-110244","EC:3.2.2.23","MetaCyc:3.2.2.23-RXN","Reactome:R-HSA-110229","GO:0003907"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0034039":null}}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: FYPO:0003044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is abnormal. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal heterochromatin assembly","synonyms":[{"name":"abnormal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"abnormal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003044"}


id: PBO:0017070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl1","termid":"PBO:0017070"}


id: FYPO:0001380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology during vegetative growth","synonyms":[{"name":"normal nuclear morphology during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001380"}


id: GO:0031956
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76022],"is_not":false,"summary":null,"term":"GO:0031956"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acid + ATP + CoA = a medium-chain fatty acyl-CoA + AMP + diphosphate. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:48340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"medium-chain fatty acid-CoA ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:6.2.1.2"],"synonyms":[{"name":"medium-chain fatty acid activation","type":"related"},{"name":"medium-chain fatty-acid-CoA ligase activity","type":"exact"},{"name":"medium-chain-fatty-acid-CoA ligase activity","type":"exact"}],"termid":"GO:0031956","terms_by_termid":{"GO:0031956":null}}


id: FYPO:0006160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad51 accumulates is lower than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PMID:16532353","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased number of Rad51 foci during meiotic prophase I","synonyms":[{"name":"decreased number of Rad51 foci during prophase I","type":"exact"},{"name":"reduced number of Rad51 foci during prophase I","type":"exact"}],"termid":"FYPO:0006160"}


id: MOD:01665
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an N-terminal L-valine residue and a strand of DNA at the C-1 of a ribose, freeing the nucleotide base and forming N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine.","definition_xrefs":["PubMed:20185759","RESID:AA0521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","synonyms":[{"name":"(2S)-2-[(3R,4R)-3,4-dihydroxy-5-(phosphonooxy)pentylidene]amino-3-methylbutanoic acid","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with DNA; via amino nitrogen","type":"exact"},{"name":"DNA glycosylase valine Schiff base intermediate","type":"exact"},{"name":"N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-valine","type":"exact"}],"termid":"MOD:01665"}


id: PBO:0087959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein involved in forming Cvt and autophagic vesicles; cycles between the phagophore assembly site (PAS) and other cytosolic punctate structures, not found in autophagosomes; may be involved in membrane delivery to the PAS","termid":"PBO:0087959"}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: GO:0031271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a pseudopodium from the lateral area of a cell.","definition_xrefs":["GOC:pg","GOC:mah","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lateral pseudopodium assembly","synonyms":[{"name":"lateral pseudopodium formation","type":"related"}],"termid":"GO:0031271"}


id: GO:1905567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:22848640","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905567)","synonyms":[{"name":"activation of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"activation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"positive regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"positive regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"up-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"upregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"}],"termid":"GO:1905567"}


id: PBO:0042649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like","termid":"PBO:0042649"}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["UniProtKB:P78875","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: PATO:0000477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000477 good value (obsolete PATO:0000477)","termid":"PATO:0000477"}


id: PBO:0004852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg6 (predicted)","termid":"PBO:0004852"}


id: PBO:0068062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 367","termid":"PBO:0068062"}


id: PBO:0088556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex WD repeat protein Elp1","termid":"PBO:0088556"}


id: FYPO:0004550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein phosphorylation during cellular response to HU","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004550"}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: GO:0035451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to its stromal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid thylakoid membrane","termid":"GO:0035449"},{"relation_name":"part_of","term_name":"stromal side of plastid thylakoid membrane","termid":"GO:0098572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of stromal side of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to stromal leaflet of plastid thylakoid membrane","type":"exact"},{"name":"extrinsic to stromal side of plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to stromal side of plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035451"}


id: PBO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein Eta2","termid":"PBO:0001834"}


id: PBO:0067709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 7","termid":"PBO:0067709"}


id: PBO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12 (predicted)","termid":"PBO:0004903"}


id: GO:1904156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN3 thymocyte. A DN3 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25+.","definition_xrefs":["PMID:25398325","GOC:TermGenie","GO_REF:0000086","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN3 thymocyte differentiation","termid":"GO:1904156"}


id: GO:0032364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of oxygen within a cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular oxygen homeostasis","synonyms":[{"name":"cellular oxygen homeostasis","type":"exact"},{"name":"oxygen homeostasis","type":"broad"}],"termid":"GO:0032364"}


id: PR:Q10409
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tsr3 gene.","definition_xrefs":["UniProtKB:Q10409","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein tsr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.04c","synonyms":[{"name":"Spom972h-tsr3","type":"exact"}],"termid":"PR:Q10409"}


id: GO:0045520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-24 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 receptor binding","synonyms":[{"name":"IL-24","type":"narrow"},{"name":"interleukin-24 receptor ligand","type":"narrow"}],"termid":"GO:0045520"}


id: PBO:0064142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKN2 antisense RNA 1","termid":"PBO:0064142"}


id: PBO:0081666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587B","termid":"PBO:0081666"}


id: PBO:0052702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 3","termid":"PBO:0052702"}


id: PBO:0073072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 1","termid":"PBO:0073072"}


id: FYPO:0005117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription","termid":"FYPO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription during nitrogen starvation","synonyms":[{"name":"normal transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"normal transcription during nitrogen depletion","type":"exact"},{"name":"normal transcription during nitrogen deprivation","type":"exact"},{"name":"normal transcription during nitrogen limitation","type":"exact"},{"name":"normal transcription in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005117"}


id: GO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-demethylubiquinol-10 = S-adenosyl-L-homocysteine + ubiquinol-10.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-demethylubiquinol-10 3-O-methyltransferase activity (obsolete GO:0044596)","termid":"GO:0044596"}


id: GO:0070628
data:
  {"annotated_genes":["SJAG_00591","SJAG_02625","SJAG_05252","SJAG_00054","SJAG_05329","SJAG_04211","SJAG_02503","SJAG_02900","SJAG_00837","SJAG_01528","SJAG_00941","SJAG_02244","SJAG_04633","SJAG_04484"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70899,71693,73690,73748,74709,75167,75693,76000,76409,76955,77083,77730,85130,97277],"is_not":false,"summary":null,"term":"GO:0070628"}]},"cv_name":"molecular_function","definition":"Binding to a proteasome, a large multisubunit protein complex that catalyzes protein degradation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00591":null,"SJAG_00837":null,"SJAG_00941":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_02503":null,"SJAG_02625":null,"SJAG_02900":null,"SJAG_04211":null,"SJAG_04484":null,"SJAG_04633":null,"SJAG_05252":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"proteasome binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0070628","terms_by_termid":{"GO:0070628":null}}


id: GO:0050479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-sn-glycerol + O2 + (tetrahydrobiopterin/tetrahydropteridine) = 1-hydroxyalkyl-sn-glycerol + H2O + (dihydrobiopterin/dihydropteridine).","definition_xrefs":["EC:1.14.16.5","MetaCyc:GLYCERYL-ETHER-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen","termid":"GO:0016714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceryl-ether monooxygenase activity","secondary_identifiers":["RHEA:36255","Reactome:R-HSA-5696119"],"synonyms":[{"name":"1-alkyl-sn-glycerol,tetrahydrobiopterin:oxygen oxidoreductase activity","type":"related"},{"name":"O-alkylglycerol monooxygenase activity","type":"related"},{"name":"alkylglycerol monooxygenase activity","type":"related"},{"name":"glyceryl ether oxygenase activity","type":"related"},{"name":"glyceryl etherase activity","type":"related"},{"name":"glyceryl-ether cleaving enzyme activity","type":"related"}],"termid":"GO:0050479"}


id: GO:0035896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism increases the frequency, rate or extent of blood mast cell degranulation in another organism.","definition_xrefs":["GOC:fj","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of mast cell degranulation in another organism","termid":"GO:0035895"},{"relation_name":"is_a","term_name":"positive regulation of mast cell degranulation","termid":"GO:0043306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation in another organism","synonyms":[{"name":"positive regulation of mast cell degranulation in other organism","type":"exact"},{"name":"up-regulation of mast cell degranulation in other organism","type":"related"},{"name":"upregulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035896"}


id: PBO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates fbp1","termid":"PBO:0000897"}


id: PBO:0057483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 601","termid":"PBO:0057483"}


id: PBO:0053390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 317","termid":"PBO:0053390"}


id: GO:0032494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of bacterial origin","termid":"GO:0002237"},{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to peptidoglycan","termid":"GO:0032494"}


id: GO:1903886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-C motif) ligand 20 production.","definition_xrefs":["GO_REF:0000058","GOC:krc","GOC:TermGenie","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-C motif) ligand 20 production","termid":"GO:1903884"},{"relation_name":"positively_regulates","term_name":"chemokine (C-C motif) ligand 20 production","termid":"GO:0036392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-C motif) ligand 20 production","synonyms":[{"name":"activation of C-C motif chemokine 20 production","type":"narrow"},{"name":"activation of CCL-20 production","type":"narrow"},{"name":"activation of CCL20 production","type":"narrow"},{"name":"activation of chemokine (C-C motif) ligand 20 production","type":"narrow"},{"name":"positive regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"positive regulation of CCL-20 production","type":"exact"},{"name":"positive regulation of CCL20 production","type":"exact"},{"name":"up regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up regulation of CCL-20 production","type":"exact"},{"name":"up regulation of CCL20 production","type":"exact"},{"name":"up regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"up-regulation of C-C motif chemokine 20 production","type":"exact"},{"name":"up-regulation of CCL-20 production","type":"exact"},{"name":"up-regulation of CCL20 production","type":"exact"},{"name":"up-regulation of chemokine (C-C motif) ligand 20 production","type":"exact"},{"name":"upregulation of C-C motif chemokine 20 production","type":"exact"},{"name":"upregulation of CCL-20 production","type":"exact"},{"name":"upregulation of CCL20 production","type":"exact"},{"name":"upregulation of chemokine (C-C motif) ligand 20 production","type":"exact"}],"termid":"GO:1903886"}


id: PBO:0084454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit; forms a complex with regulatory subunit Csg2p; function in sphingolipid biosynthesis is overlapping with that of Sur1p; CSH1 has a paralog, SUR1, that arose from the whole genome duplication","termid":"PBO:0084454"}


id: PBO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 2","termid":"PBO:0044305"}


id: PBO:0068453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 29, pseudogene","termid":"PBO:0068453"}


id: GO:1901192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of formation of translation initiation ternary complex","termid":"GO:1901190"},{"relation_name":"positively_regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of formation of translation initiation ternary complex","synonyms":[{"name":"activation of formation of translation initiation ternary complex","type":"narrow"},{"name":"activation of translation initiation ternary complex assembly","type":"exact"},{"name":"positive regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"up-regulation of formation of translation initiation ternary complex","type":"exact"},{"name":"up-regulation of translation initiation ternary complex assembly","type":"exact"},{"name":"upregulation of formation of translation initiation ternary complex","type":"exact"},{"name":"upregulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901192"}


id: PBO:0075497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 42","termid":"PBO:0075497"}


id: GO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"negative regulation of bone remodeling","termid":"GO:0046851"},{"relation_name":"negatively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone resorption","synonyms":[{"name":"down regulation of bone resorption","type":"exact"},{"name":"down-regulation of bone resorption","type":"exact"},{"name":"downregulation of bone resorption","type":"exact"},{"name":"inhibition of bone resorption","type":"narrow"}],"termid":"GO:0045779"}


id: PBO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 290","termid":"PBO:0042798"}


id: PR:O13931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp18 gene.","definition_xrefs":["UniProtKB:O13931","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit J, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.11","synonyms":[{"name":"Spom972h-atp18","type":"exact"}],"termid":"PR:O13931"}


id: PBO:0077028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymocyte selection associated family member 3, pseudogene","termid":"PBO:0077028"}


id: GO:0004449
data:
  {"annotated_genes":["SJAG_00502"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70872],"is_not":false,"summary":null,"term":"GO:0004449"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH.","definition_xrefs":["RHEA:23632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocitrate dehydrogenase [NAD(P)+] activity","termid":"GO:0004448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:1.1.1.41","MetaCyc:ISOCITRATE-DEHYDROGENASE-NAD+-RXN","Reactome:R-HSA-70967"],"synonyms":[{"name":"NAD dependent isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD isocitric dehydrogenase activity","type":"exact"},{"name":"NAD-linked isocitrate dehydrogenase activity","type":"exact"},{"name":"NAD-specific isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitrate dehydrogenase (NAD) activity","type":"exact"},{"name":"isocitrate:NAD+ oxidoreductase (decarboxylating)","type":"exact"},{"name":"nicotinamide adenine dinucleotide isocitrate dehydrogenase activity","type":"exact"}],"termid":"GO:0004449","terms_by_termid":{"GO:0004449":null}}


id: PBO:0047700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formation of mitochondrial complex V assembly factor 1 homolog","termid":"PBO:0047700"}


id: PBO:0003841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II","termid":"PBO:0003841"}


id: GO:0071859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neuropeptide F receptor.","definition_xrefs":["GOC:mah","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neuropeptide F receptor binding","termid":"GO:0071859"}


id: GO:0034083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polyketide synthase complex that consists of two identical ketosynthase polypeptides.","definition_xrefs":["GOC:cb","PMID:12636085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide synthase complex","termid":"GO:0034081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"type III polyketide synthase complex","synonyms":[{"name":"type III PKS","type":"exact"},{"name":"type III PKS complex","type":"exact"},{"name":"type III polyketide synthase","type":"exact"}],"termid":"GO:0034083"}


id: GO:0102689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + N(6)-dimethylallyladenine = H+ + 7-(alpha-D-glucosyl)-N(6)-isopentenyladenine + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-glucose:isopentenyladenine 7-N-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4727"],"termid":"GO:0102689"}


id: GO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of insulin receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of insulin receptor signaling pathway","termid":"GO:0046626"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to insulin stimulus","termid":"GO:1900078"},{"relation_name":"positively_regulates","term_name":"insulin receptor signaling pathway","termid":"GO:0008286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of insulin receptor signaling pathway","synonyms":[{"name":"activation of insulin receptor signaling pathway","type":"narrow"},{"name":"positive regulation of insulin receptor signalling pathway","type":"exact"},{"name":"stimulation of insulin receptor signaling pathway","type":"narrow"},{"name":"up regulation of insulin receptor signaling pathway","type":"exact"},{"name":"up-regulation of insulin receptor signaling pathway","type":"exact"},{"name":"upregulation of insulin receptor signaling pathway","type":"exact"}],"termid":"GO:0046628"}


id: PBO:0086273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a likely role in ribosomal maturation; required for accumulation of wild-type levels of large (60S) ribosomal subunits; binds to the helicase Dbp6p in pre-60S ribosomal particles in the nucleolus","termid":"PBO:0086273"}


id: PBO:0085991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for selective and nonselective autophagy, and mitophagy; regulates the rate of autophagosome formation; interacts with Atg9p, and has a similar peri-mitochondrial localization; elevated Gcn4p-dependent expression under autophagy-inducing conditions; mobilized into polysomes upon a shift from a fermentable to nonfermentable carbon source; potential Cdc28p substrate; ATG41 has a paralog, ICY1, that arose from the whole genome duplication","termid":"PBO:0085991"}


id: RO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","termid":"RO:0002430"}


id: PBO:0080039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 25","termid":"PBO:0080039"}


id: GO:2000689
data:
  {"annotated_genes":["SJAG_02864","SJAG_04498","SJAG_04621","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93551,93800,85047,103458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[76429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"An actin filament organization process that contributes to actomyosin contractile ring assembly during cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0030036","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"actin filament organisation of constriction ring assembly","type":"related"},{"name":"actin filament organisation of contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"actin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of constriction ring assembly","type":"related"},{"name":"actin filament organization of contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:2000689","terms_by_termid":{"GO:0071520":null,"GO:1903479":null}}


id: GO:0031702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 angiotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor binding","termid":"GO:0031701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1 angiotensin receptor binding","synonyms":[{"name":"AT1 receptor binding","type":"exact"},{"name":"type 1 angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031702"}


id: PBO:0036363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HGH1 ortholog","termid":"PBO:0036363"}


id: GO:0006068
data:
  {"annotated_genes":["SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96328],"is_not":false,"summary":null,"term":"GO:0006068"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ethanol, CH3-CH2-OH, a colorless, water-miscible, flammable liquid produced by alcoholic fermentation.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ethanol catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ethanol breakdown","type":"exact"},{"name":"ethanol catabolism","type":"exact"},{"name":"ethanol degradation","type":"exact"}],"termid":"GO:0006068","terms_by_termid":{"GO:0006068":null}}


id: GO:0097077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of copper(I) (Cu+).","definition_xrefs":["PMID:19928961","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0140299","GO:0003674"],"is_obsolete":false,"name":"copper ion sensor activity","termid":"GO:0097077"}


id: PBO:0081316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 100","termid":"PBO:0081316"}


id: PBO:0040428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e2","termid":"PBO:0040428"}


id: GO:0000075
data:
  {"annotated_genes":["SJAG_00327","SJAG_00082","SJAG_00429","SJAG_01855","SJAG_04884","SJAG_03681","SJAG_03126","SJAG_03695","SJAG_01873","SJAG_04597","SJAG_03927","SJAG_02451","SJAG_03048","SJAG_04287","SJAG_01297","SJAG_01679","SJAG_01082","SJAG_03160","SJAG_03073","SJAG_04671","SJAG_01076","SJAG_03438","SJAG_04332","SJAG_01205","SJAG_02576","SJAG_00071","SJAG_01084","SJAG_01429","SJAG_00364","SJAG_00486","SJAG_05373","SJAG_01677","SJAG_01708","SJAG_03327","SJAG_01210","SJAG_01330","SJAG_01680","SJAG_04999","SJAG_02169","SJAG_03353","SJAG_02074","SJAG_01010","SJAG_02771","SJAG_02026","SJAG_00640","SJAG_04140","SJAG_03602","SJAG_01837","SJAG_00169","SJAG_03720","SJAG_01146","SJAG_02336","SJAG_02563","SJAG_04280","SJAG_02098","SJAG_00623","SJAG_01605","SJAG_01044","SJAG_02266","SJAG_01401","SJAG_04259","SJAG_04126","SJAG_02392","SJAG_03026","SJAG_00883","SJAG_03898","SJAG_03942","SJAG_03529","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108971,107190,99300,95059,109443,102572,111024,86400,103568],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[101670,109668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[77712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[101965,87068,111184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[101966,84785,111185,76996,109433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[111779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[96893,111127,89993,85694,95994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[78780,89164,109637,111128,111358,106436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[74464,87069,101968,89558,107264,95995,111910,104611,77716,71971,78063,112354,94847,71237,111186,94687,112195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[111026,84673,104190,97079,97787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[86949,104958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[91406,90124,93943,111129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[87424,85910,106961,112113,112778,84847,94848,95996,104612,101969,74652,87070,96513,71973,78080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[103008,94688,101970,107266,87071,94849,73886,97788,84848,90125,96319,86128,106962,77715,77896,78078,91569,111188,84891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[97239,109672,105189,110675,94922,101672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[89786],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[108976],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[111785],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[96794],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression by monitoring the integrity of specific cell cycle events. A cell cycle checkpoint begins with detection of deficiencies or defects and ends with signal transduction.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle phase transition","termid":"GO:1901988"}],"gene_count":69,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00082":null,"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00883":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01837":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02392":null,"SJAG_02451":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03126":null,"SJAG_03160":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03529":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04597":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0072395","GO:0071779","GO:0031576","GO:0072404","GO:0072407","Wikipedia:Cell_cycle_checkpoint"],"synonyms":[{"name":"G1/S checkpoint","type":"narrow"},{"name":"G1/S transition checkpoint","type":"narrow"},{"name":"G2/M checkpoint","type":"narrow"},{"name":"G2/M transition checkpoint","type":"narrow"},{"name":"cell cycle checkpoint","type":"exact"},{"name":"signal transduction involved in G2/M transition checkpoint","type":"exact"},{"name":"signal transduction involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:0000075","terms_by_termid":{"GO:0007094":null,"GO:0007095":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0051598":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:1904315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any transmitter-gated ion channel activity that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:TermGenie","PMID:20200227","GO_REF:0000061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857","GO:0038023"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ionotropic neurotransmitter receptor activity involved in regulation of post-synaptic membrane potential","type":"narrow"},{"name":"ionotropic neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"narrow"},{"name":"transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"broad"}],"termid":"GO:1904315"}


id: PBO:0074215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 1","termid":"PBO:0074215"}


id: GO:0120011
data:
  {"annotated_genes":["SJAG_01329"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101684],"is_not":false,"summary":null,"term":"GO:0120011"}]},"cv_name":"biological_process","definition":"The transport of sterols between membranes in which a sterol molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","PMID:24220498","PMID:25797198","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"intermembrane sterol transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120011","terms_by_termid":{"GO:0120011":null}}


id: GO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.","definition_xrefs":["MetaCyc:SULFMETII-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfate reduction (obsolete GO:0019419)","synonyms":[{"name":"assimilatory sulfate reduction","type":"narrow"},{"name":"assimilatory sulphate reduction","type":"narrow"},{"name":"sulfate reduction, APS pathway","type":"narrow"},{"name":"sulphate reduction","type":"exact"},{"name":"sulphate reduction, APS pathway","type":"narrow"}],"termid":"GO:0019419"}


id: PBO:0038485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 10","termid":"PBO:0038485"}


id: FYPO:0001942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population in a culture remains in lag phase longer than normal. The onset of exponential growth is thus delayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased duration of lag phase","synonyms":[{"name":"delayed exponential growth","type":"exact"},{"name":"prolonged lag phase","type":"exact"}],"termid":"FYPO:0001942"}


id: PBO:0041708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 3","termid":"PBO:0041708"}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: GO:0044665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL1 or MLL2 in human, or equivalent in other species.","definition_xrefs":["PMID:21875999","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"MLL1/2 complex","synonyms":[{"name":"Trx-containing complex","type":"exact"}],"termid":"GO:0044665"}


id: GO:0039586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein phosphatase-1 (PP1) activity, a serine/threonine phosphatase. Different viruses modulate host PP1 activity to remove phosphates from various cellular substrates and downregulate the host's antiviral response.","definition_xrefs":["UniProtKB-KW:KW-1126","VZ:803"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host PP1 activity (obsolete GO:0039586)","synonyms":[{"name":"modulation of host PP1 activity by virus","type":"exact"},{"name":"regulation by virus of host PP1 activity","type":"exact"}],"termid":"GO:0039586"}


id: GO:0106136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by secretion of lectins which bind to the bacterial surface. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:rjd","PMID:30049880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lectin-induced modified bacterial internalization","synonyms":[{"name":"LIMBI","type":"exact"}],"termid":"GO:0106136"}


id: GO:0031582
data:
  {"annotated_genes":["SJAG_04855","SJAG_04671","SJAG_03997","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94852,97703,110174],"is_not":false,"summary":null,"term":"GO:0031582"},{"annotations":[98630],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the eukaryotic rDNA repeat spacer.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"},{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"replication fork arrest at rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"replication fork arrest at ribosomal DNA repeats","type":"exact"},{"name":"replication fork blocking at rDNA repeats","type":"exact"}],"termid":"GO:0031582","terms_by_termid":{"GO:0031582":null,"GO:1902681":null}}


id: GO:1904106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a microvillus.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:25335890","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microvillus","synonyms":[{"name":"protein localisation in microvillus","type":"exact"},{"name":"protein localisation to microvillus","type":"exact"},{"name":"protein localization in microvillus","type":"exact"}],"termid":"GO:1904106"}


id: PBO:0078023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 13","termid":"PBO:0078023"}


id: GO:0006124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ferredoxin, any simple, nonenzymatic iron-sulfur protein that is characterized by having equal numbers of atoms of iron and labile sulfur. Iron and sulfur atoms are present in one or two clusters of two or four atoms of each.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ferredoxin metabolic process","synonyms":[{"name":"ferredoxin metabolism","type":"exact"}],"termid":"GO:0006124"}


id: PBO:0003279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase (predicted)","termid":"PBO:0003279"}


id: GO:0001182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates the transition from the initiation to the elongation phases of transcription by RNA polymerase I, generally including a conformational change from the initiation conformation to the elongation conformation. Promoter clearance often involves breaking contact with transcription factors involved only in the initiation phase and making contacts with elongation specific factors.","definition_xrefs":["GOC:txnOH","PMID:18559419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter clearance during DNA-templated transcription","termid":"GO:0001109"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase I","termid":"GO:0006360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA polymerase I promoter clearance","secondary_identifiers":["GO:0001184"],"synonyms":[{"name":"RNA polymerase I promoter escape","type":"exact"},{"name":"promoter clearance from RNA polymerase I promoter","type":"exact"},{"name":"promoter clearance from RNA polymerase I promoter for nuclear large rRNA transcript","type":"related"}],"termid":"GO:0001182"}


id: GO:0009104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide catabolic process","synonyms":[{"name":"LPS catabolic process","type":"exact"},{"name":"lipopolysaccharide breakdown","type":"exact"},{"name":"lipopolysaccharide catabolism","type":"exact"},{"name":"lipopolysaccharide degradation","type":"exact"}],"termid":"GO:0009104"}


id: PBO:0046636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 17","termid":"PBO:0046636"}


id: GO:0034331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves a cell junction in a stable functional or structural state. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"},{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell junction maintenance","termid":"GO:0034331"}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PR:Q9P373
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cysteine protease ATG4A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine protease atg4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.08","secondary_identifiers":["UniProtKB:Q9P373"],"synonyms":[{"name":"SPAC19B12.08","type":"related"},{"name":"Spom972h-ATG4A","type":"exact"},{"name":"autophagy-related protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P373"}


id: PBO:0058629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6761","termid":"PBO:0058629"}


id: FYPO:0004178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell of the h+ mating type when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:8668157","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation in h+ cells","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation in h+ cells","type":"related"},{"name":"increased RNA level during nitrogen depletion in h+ cells","type":"exact"},{"name":"increased RNA level during nitrogen deprivation in h+ cells","type":"exact"},{"name":"increased transcript level during nitrogen starvation in h+ cells","type":"exact"}],"termid":"FYPO:0004178"}


id: PBO:0085569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein homologous to Chediak-Higashi syndrome and Beige proteins; both of which are implicated in disease syndromes in human and mouse, respectively, due to defective lysosomal trafficking; mutant phenotype and genetic interactions suggest a role in protein sorting","termid":"PBO:0085569"}


id: FYPO:0004884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle midzone for a longer time than normal. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","GO:1902967","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to mitotic spindle","termid":"FYPO:0004023"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle midzone","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle midzone","type":"exact"},{"name":"increased duration of protein localization to spindle midzone during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0004884"}


id: GO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The F-actin-rich core of an adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome core","termid":"GO:0061825"}


id: GO:0003223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compact cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular compact myocardium morphogenesis","termid":"GO:0003223"}


id: GO:1903132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tube lumen cavitation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:dph","PMID:22898778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"tube lumen cavitation","termid":"GO:0060605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube lumen cavitation","termid":"GO:1903132"}


id: PBO:0083393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF CDC15/YAR019C","termid":"PBO:0083393"}


id: PBO:0079423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta class I pseudogene 6","termid":"PBO:0079423"}


id: PBO:0055693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1 and RIOK2 antisense RNA 1","termid":"PBO:0055693"}


id: PBO:0055433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2863","termid":"PBO:0055433"}


id: PBO:0090730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12a","termid":"PBO:0090730"}


id: PBO:0049362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 21","termid":"PBO:0049362"}


id: GO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core TFIIH complex when it is part of the nucleotide-excision repair factor 3 (NEF3).","definition_xrefs":["PMID:22308316","PMID:7813015","PMID:22572993","GOC:krc","GOC:ew","PMID:14500720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor TFIIH core complex","termid":"GO:0000439"},{"relation_name":"part_of","term_name":"nucleotide-excision repair factor 3 complex","termid":"GO:0000112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"core TFIIH complex portion of NEF3 complex","secondary_identifiers":["GO:0000442"],"synonyms":[{"name":"SSL2-core TFIIH complex portion of NEF3 complex","type":"exact"}],"termid":"GO:0000440"}


id: PBO:0042945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 1","termid":"PBO:0042945"}


id: PBO:0042706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUGBP Elav-like family member 5","termid":"PBO:0042706"}


id: GO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"positive regulation of CCL3 production","type":"exact"},{"name":"positive regulation of MIP-1a production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071642"}


id: PBO:0049319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GS homeobox 1","termid":"PBO:0049319"}


id: GO:0052918
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86785],"is_not":false,"summary":null,"term":"GO:0052918"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->6))-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["RHEA:29539","EC:2.4.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06261","MetaCyc:RXN-5469"],"termid":"GO:0052918","terms_by_termid":{"GO:0052918":null}}


id: PBO:0068293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 2","termid":"PBO:0068293"}


id: GO:0035039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion at fertilization of the inactive sperm nucleus into a male pronucleus with its chromosomes processed for the first zygotic division.","definition_xrefs":["PMID:11735001","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"male pronucleus assembly","synonyms":[{"name":"male pronucleus formation","type":"related"}],"termid":"GO:0035039"}


id: PBO:0085509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; RPS11B has a paralog, RPS11A, that arose from the whole genome duplication","termid":"PBO:0085509"}


id: GO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized structure unique to microsporidia that is required for host cell invasion. In the spore, the polar tube is connected at the anterior end, and then coils around the sporoplasm. Upon appropriate environmental stimulation, the polar tube rapidly discharges out of the spore, pierces a cell membrane and serves as a conduit for sporoplasm passage into the new host cell.","definition_xrefs":["GOC:mf","PMID:12076771","PMID:9723921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polar tube","termid":"GO:0044099"}


id: PBO:0012049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0012049"}


id: PATO:0000545
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000545 relative photosensitivity value (obsolete PATO:0000545)","termid":"PATO:0000545"}


id: PBO:0058445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5010","termid":"PBO:0058445"}


id: FYPO:0007505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at promoter","synonyms":[{"name":"decreased protein localisation to chromatin at promoter","type":"exact"},{"name":"decreased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at promoter during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at promoter","type":"exact"}],"termid":"FYPO:0007505"}


id: FYPO:0002903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is viable and shaped in the form of a pear in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pear-shaped cell","termid":"FYPO:0000020"},{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable pear-shaped vegetative cell","synonyms":[{"name":"viable ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"viable pear-shaped cell during vegetative growth","type":"exact"},{"name":"viable pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002903"}


id: PBO:0036341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human C2orf76 ortholog, implicated in mitochondrial organisation","termid":"PBO:0036341"}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","PMID:23496142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: PBO:0090237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box non-histone chromatin protein","termid":"PBO:0090237"}


id: PBO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 2","termid":"PBO:0046091"}


id: PBO:0082490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I); phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity; required for H3K36 trimethylation but not dimethylation by Set2p; suggested stimulatory role in 80S formation during translation initiation; similar to the Drosophila dCDK12 and human CDK12 and probably CDK13","termid":"PBO:0082490"}


id: GO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cystic fibrosis transmembrane conductance regulator binding (obsolete GO:0042980)","synonyms":[{"name":"CFTR binding","type":"exact"},{"name":"cystic fibrosis transmembrane conductance regulator binding","type":"exact"}],"termid":"GO:0042980"}


id: GO:0019442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including acetyl-CoA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA metabolic process","termid":"GO:0006084"},{"relation_name":"is_a","term_name":"tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"amide catabolic process","termid":"GO:0043605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044248","GO:0044281","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"tryptophan catabolic process to acetyl-CoA","secondary_identifiers":["MetaCyc:TRYPTOPHAN-DEGRADATION-1"],"synonyms":[{"name":"tryptophan breakdown to acetyl-CoA","type":"exact"},{"name":"tryptophan degradation to acetyl-CoA","type":"exact"}],"termid":"GO:0019442"}


id: GO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.","definition_xrefs":["PMID:11526084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell hair","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"imaginal disc-derived wing hair","type":"narrow"},{"name":"non-sensory hair","type":"exact"}],"termid":"GO:0070451"}


id: PBO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 9-1","termid":"PBO:0061179"}


id: GO:1901044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:21324894","GOC:al","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1901044)","termid":"GO:1901044"}


id: GO:1902311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of copper ion transmembrane transport.","definition_xrefs":["PMID:21489137","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metal ion transport","termid":"GO:0010959"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of copper ion transmembrane transport","synonyms":[{"name":"regulation of copper cation transmembrane transport","type":"exact"},{"name":"regulation of copper ion membrane transport","type":"exact"}],"termid":"GO:1902311"}


id: GO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion","termid":"GO:0001820"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin secretion, neurotransmission","synonyms":[{"name":"serotonin release, neurotransmission","type":"related"}],"termid":"GO:0060096"}


id: PBO:0082128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions; monomeric actin in the nucleus plays a role in INO80 chromatin remodeling","termid":"PBO:0082128"}


id: PBO:0056725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix extracellular phosphoglycoprotein","termid":"PBO:0056725"}


id: PBO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA-specific 2-thiouridylase Slm3 (predicted)","termid":"PBO:0018232"}


id: PBO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family","termid":"PBO:0000156"}


id: PBO:0003724
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.2.13","termid":"PBO:0003724"}


id: PBO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo84 (predicted)","termid":"PBO:0000907"}


id: GO:0102382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rebaudioside B + UDP-alpha-D-glucose = rebaudioside A + UDP + H+.","definition_xrefs":["GOC:pz","EC:2.4.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"rebaudioside B glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13518"],"termid":"GO:0102382"}


id: GO:0004660
data:
  {"annotated_genes":["SJAG_02583","SJAG_04923"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71415,73331],"is_not":false,"summary":null,"term":"GO:0004660"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate.","definition_xrefs":["EC:2.5.1.58","PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein farnesyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9647978","RHEA:13345","MetaCyc:RXN-17573","GO:0018223","Reactome:R-HSA-2530501"],"synonyms":[{"name":"CAAX farnesyltransferase activity","type":"narrow"},{"name":"FTase activity","type":"related"},{"name":"farnesyl-diphosphate:protein-cysteine farnesyltransferase activity","type":"related"},{"name":"protein-cysteine farnesyltransferase activity","type":"exact"}],"termid":"GO:0004660","terms_by_termid":{"GO:0004660":null}}


id: GO:1901913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of capsule organization","synonyms":[{"name":"regulation of capsule organisation","type":"exact"},{"name":"regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901913"}


id: PBO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein involved in inositol lipid-mediated signaling Sfk1","termid":"PBO:0090580"}


id: PBO:0070353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 26","termid":"PBO:0070353"}


id: PBO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.12","termid":"PBO:0002354"}


id: PBO:0079545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA6 divergent transcript","termid":"PBO:0079545"}


id: GO:2000485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutamine transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"glutamine transport","termid":"GO:0006868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of glutamine transport","synonyms":[{"name":"regulation of L-glutamine transport","type":"related"}],"termid":"GO:2000485"}


id: PBO:0004665
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea-acanthocytosis","termid":"PBO:0004665"}


id: PBO:0081227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYM-type containing 6","termid":"PBO:0081227"}


id: PBO:0085560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; involved in spore wall assembly; sequence similarity to GAT4, and the double mutant gat3 gat4 exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085560"}


id: PBO:0044281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 4","termid":"PBO:0044281"}


id: GO:0004902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with granulocyte colony-stimulating factor (G-CSF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor receptor activity","secondary_identifiers":["GO:0030524"],"synonyms":[{"name":"CSF3R","type":"related"},{"name":"G-CSF receptor activity","type":"exact"},{"name":"granulocyte colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0004902"}


id: PBO:0003268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine diphosphate-N-acetylglucosamine transporter Hut1","termid":"PBO:0003268"}


id: PBO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyl transferase; catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction","termid":"PBO:0085029"}


id: PBO:0049560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 26","termid":"PBO:0049560"}


id: PBO:0086781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless GFP fusion proteins localize to the endoplasmic reticulum and mCherry fusion protein localizes to the vacuole","termid":"PBO:0086781"}


id: PBO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 9","termid":"PBO:0070856"}


id: PBO:0079235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC9 divergent transcript","termid":"PBO:0079235"}


id: PBO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 1","termid":"PBO:0042947"}


id: PBO:0083562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene VID21/YDR359C","termid":"PBO:0083562"}


id: GO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"negatively_regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte chemotaxis","synonyms":[{"name":"down regulation of leukocyte chemotaxis","type":"exact"},{"name":"down-regulation of leukocyte chemotaxis","type":"exact"},{"name":"downregulation of leukocyte chemotaxis","type":"exact"},{"name":"inhibition of leukocyte chemotaxis","type":"narrow"},{"name":"negative regulation of immune cell chemotaxis","type":"exact"},{"name":"negative regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002689"}


id: PBO:0029620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029620"}


id: MOD:00643
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Artifact","definition_xrefs":["PubMed:11968134","Unimod:337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized residue","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:00643"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: PBO:0029211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dTTP_biosynthetic_process","termid":"PBO:0029211"}


id: GO:1990328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that cycles between the nucleus where it is part of the RNA polymerase II and the cytoplasmic mRNA processing body where it mediates the two major cytoplasmic mRNA decay pathways.","definition_xrefs":["GOC:bhm","PMID:15591044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RPB4-RPB7 complex","synonyms":[{"name":"RNA polymerase II, RPB4-RPB7 subcomplex","type":"narrow"}],"termid":"GO:1990328"}


id: GO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a stylet, a hollow protrusible spear-like symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of stylet for nutrient acquisition","synonyms":[{"name":"formation by symbiont of stylet for nutrient acquisition from host","type":"related"}],"termid":"GO:0085001"}


id: GO:1902444
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105642],"is_not":false,"summary":null,"term":"GO:1902444"}]},"cv_name":"molecular_function","definition":"Binding to riboflavin.","definition_xrefs":["PMID:12083520","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"riboflavin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902444","terms_by_termid":{"GO:1902444":null}}


id: PBO:0072774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A3, pseudogene","termid":"PBO:0072774"}


id: FYPO:0006606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows an abnormal temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal dynamic protein localization pattern","synonyms":[{"name":"abnormal dynamic pattern of protein localization","type":"exact"},{"name":"abnormal dynamic protein localisation pattern","type":"exact"},{"name":"abnormal protein exchange","type":"exact"},{"name":"abnormal protein turnover","type":"exact"},{"name":"abnormal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006606"}


id: PBO:0039179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 9","termid":"PBO:0039179"}


id: PBO:0077244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 5A","termid":"PBO:0077244"}


id: GO:0110093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile nucleus furthest from the direction of movement.","definition_xrefs":["PMID:24335254","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nucleus lagging edge","termid":"GO:0110093"}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: PBO:0062326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 64 pseudogene","termid":"PBO:0062326"}


id: PBO:0001254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1640 family protein","termid":"PBO:0001254"}


id: PBO:0082204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082204"}


id: GO:1902179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verruculogen.","definition_xrefs":["GOC:TermGenie","PMID:23649274","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"indole alkaloid metabolic process","termid":"GO:0035834"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"verruculogen metabolic process","synonyms":[{"name":"verruculogen metabolism","type":"exact"}],"termid":"GO:1902179"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: SO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chloroplast, a photosynthetic plastid.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"chloroplast_sequence","termid":"SO:0000745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA","synonyms":[{"name":"chloroplast DNA","type":"exact"}],"termid":"SO:0001033"}


id: PBO:0084346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0084346"}


id: GO:0033588
data:
  {"annotated_genes":["SJAG_04175","SJAG_04756","SJAG_04452","SJAG_03677","SJAG_04704","SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72084,72168,78293,105427,109160,113669],"is_not":false,"summary":null,"term":"GO:0033588"}]},"cv_name":"cellular_component","definition":"A heterohexameric protein complex composed two discrete heterotrimeric subcomplexes that is involved in modification of wobble nucleosides in tRNA.","definition_xrefs":["PMID:15769872","GOC:bhm","GOC:jh","PMID:11435442","PMID:23165209","GOC:vw","PMID:11689709","GOC:mah","PMID:17018299","PMID:18755837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04175":null,"SJAG_04452":null,"SJAG_04704":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"elongator holoenzyme complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0033589"],"synonyms":[{"name":"Elongator core complex","type":"related"}],"termid":"GO:0033588","terms_by_termid":{"GO:0033588":null}}


id: GO:0045927
data:
  {"annotated_genes":["SJAG_02392","SJAG_03581","SJAG_02723","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85565,90162,91403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[102002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of growth","type":"narrow"},{"name":"stimulation of growth","type":"narrow"},{"name":"up regulation of growth","type":"exact"},{"name":"up-regulation of growth","type":"exact"},{"name":"upregulation of growth","type":"exact"}],"termid":"GO:0045927","terms_by_termid":{"GO:0030307":null,"GO:0051519":null}}


id: PBO:0076467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1","termid":"PBO:0076467"}


id: PBO:0042005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 60","termid":"PBO:0042005"}


id: GO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keto-D-gluconate metabolic process","termid":"GO:0019525"},{"relation_name":"is_a","term_name":"ketogluconate biosynthetic process","termid":"GO:0046180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"keto-D-gluconate biosynthetic process","synonyms":[{"name":"keto-D-gluconate anabolism","type":"exact"},{"name":"keto-D-gluconate biosynthesis","type":"exact"},{"name":"keto-D-gluconate formation","type":"exact"},{"name":"keto-D-gluconate synthesis","type":"exact"}],"termid":"GO:0046179"}


id: PBO:0016992
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016992"}


id: GO:1905439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 6'-sulfate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22365850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chondroitin 6'-sulfate","termid":"GO:1905439"}


id: GO:1904685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000059","GOC:TermGenie","PMID:18591254","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"},{"relation_name":"is_a","term_name":"positive regulation of metallopeptidase activity","termid":"GO:1905050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metalloendopeptidase activity","synonyms":[{"name":"activation of metalloendopeptidase activity","type":"narrow"},{"name":"activation of metalloendoprotease activity","type":"narrow"},{"name":"activation of metalloendoproteinase activity","type":"narrow"},{"name":"positive regulation of metalloendoprotease activity","type":"narrow"},{"name":"positive regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up regulation of metalloendopeptidase activity","type":"exact"},{"name":"up regulation of metalloendoprotease activity","type":"narrow"},{"name":"up regulation of metalloendoproteinase activity","type":"narrow"},{"name":"up-regulation of metalloendopeptidase activity","type":"exact"},{"name":"up-regulation of metalloendoprotease activity","type":"narrow"},{"name":"up-regulation of metalloendoproteinase activity","type":"narrow"},{"name":"upregulation of metalloendopeptidase activity","type":"exact"},{"name":"upregulation of metalloendoprotease activity","type":"narrow"},{"name":"upregulation of metalloendoproteinase activity","type":"narrow"}],"termid":"GO:1904685"}


id: GO:0034186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to apolipoprotein A-I.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein binding","termid":"GO:0034185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"apolipoprotein A-I binding","termid":"GO:0034186"}


id: FYPO:0006359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of pericentric heterochromatin.","definition_xrefs":["GO:0005721","PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased protein exchange at pericentric heterochromatin","synonyms":[{"name":"decreased protein exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased protein exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein motility on centromeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0006359"}


id: MOD:01355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a threonine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1O-glycosylated threonine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01355"}


id: PR:O13941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C23H3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.11c","synonyms":[{"name":"Spom972h-SPAC23H3.11c","type":"exact"}],"termid":"PR:O13941"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: GO:0001091
data:
  {"annotated_genes":["SJAG_00159"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a basal RNA polymerase II transcription factor, any of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II and defined as a basal or general transcription factor.","definition_xrefs":["PMID:16858867","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal RNA polymerase II transcription machinery binding","termid":"GO:0001099"},{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II general transcription initiation factor binding","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"RNA polymerase II basal transcription factor binding","type":"exact"}],"termid":"GO:0001091","terms_by_termid":{"GO:0001097":null}}


id: PBO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 13","termid":"PBO:0075157"}


id: GO:0070212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of multiple ADP-ribose residues from NAD to a protein amino acid, forming a poly(ADP-ribose) chain.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:mah","PMID:25043379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-translational protein modification","termid":"GO:0043687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein poly-ADP-ribosylation","synonyms":[{"name":"addition of poly-ADP-ribose to protein","type":"exact"},{"name":"poly(ADP-ribose) addition to protein","type":"exact"},{"name":"protein amino acid poly-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) metabolism","type":"related"},{"name":"protein poly(ADP-ribose) synthesis","type":"exact"}],"termid":"GO:0070212"}


id: GO:0090052
data:
  {"annotated_genes":["SJAG_03624","SJAG_01599"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92725,95770],"is_not":false,"summary":null,"term":"GO:0090052"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heterochromatin formation at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01599":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at centromere","type":"exact"},{"name":"regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090052","terms_by_termid":{"GO:0090052":null}}


id: GO:0001118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a transcription ternary complex, composed of RNA polymerase, template DNA, and an RNA transcript, into its constituent components.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex disassembly","termid":"GO:0001117"},{"relation_name":"part_of","term_name":"DNA-templated transcription termination","termid":"GO:0006353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription ternary complex disassembly","synonyms":[{"name":"transcription protein-DNA-RNA complex disassembly","type":"exact"}],"termid":"GO:0001118"}


id: GO:1900318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"}


id: PBO:0063514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 2","termid":"PBO:0063514"}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["GOC:nln","PMID:6267560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide binding","termid":"GO:0042277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: GO:0160004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ADP-ribosylation of the target protein.","definition_xrefs":["PMID:26673700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-D-ribose modification-dependent protein binding","termid":"GO:0160002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"poly-ADP-D-ribose modification-dependent protein binding","termid":"GO:0160004"}


id: PBO:0068019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 324","termid":"PBO:0068019"}


id: PR:Q9P7J4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mft1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit mft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.11c","synonyms":[{"name":"Spom972h-mft1","type":"exact"}],"termid":"PR:Q9P7J4"}


id: PBO:0064381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 3","termid":"PBO:0064381"}


id: PBO:0082978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic trifunctional enzyme; catalyzes sequential reactions 10-formyl-THF synthetase (EC 6.3.4.3), 5,10-methenyl-THF cyclohydrolase (EC 3.5.4.9), and 5,10-methylene-THF dehydrogenase (EC 1.5.1.5), to supply forms of activated one-carbon units required for biosynthesis of purines, histidine, methionine, pantothenic acid, the formyl group of mitochondrial fMet-tRNAfMet, and the methyl group of thymidylate; null mutation causes auxotrophy for adenine and histidine in rich medium","termid":"PBO:0082978"}


id: PBO:0038986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 2C","termid":"PBO:0038986"}


id: PBO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_taxon","termid":"PBO:0034237"}


id: PBO:0047988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member E, pseudogene","termid":"PBO:0047988"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: FYPO:0001902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small P-bodies","termid":"FYPO:0001900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small P-bodies during glucose starvation","synonyms":[{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"small P bodies during glucose starvation","type":"exact"},{"name":"small P-bodies during glucose depletion","type":"exact"},{"name":"small P-bodies during glucose deprivation","type":"exact"},{"name":"small P-bodies during glucose limitation","type":"related"},{"name":"small P-body during glucose starvation","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies during glucose starvation","type":"exact"}],"termid":"FYPO:0001902"}


id: GO:1904970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of adjacent microvilli through the formation of Ca(2+)-dependent adhesion links between them, forming a brush border.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:lb","PMID:24725409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"brush border assembly","synonyms":[{"name":"brush border formation","type":"exact"}],"termid":"GO:1904970"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: PBO:0039454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 2","termid":"PBO:0039454"}


id: PBO:0029682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_interphase_before_NETO","termid":"PBO:0029682"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: PBO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase (predicted)","termid":"PBO:0001789"}


id: GO:0045785
data:
  {"annotated_genes":["SJAG_03484","SJAG_01253","SJAG_02380","SJAG_00910","SJAG_03802","SJAG_04191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111270,104064,106610,103944,109263,101253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00910":null,"SJAG_01253":null,"SJAG_02380":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell adhesion","type":"narrow"},{"name":"stimulation of cell adhesion","type":"narrow"},{"name":"up regulation of cell adhesion","type":"exact"},{"name":"up-regulation of cell adhesion","type":"exact"},{"name":"upregulation of cell adhesion","type":"exact"}],"termid":"GO:0045785","terms_by_termid":{"GO:1900735":null}}


id: PBO:0068642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 23, pseudogene","termid":"PBO:0068642"}


id: FYPO:0007106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of all or part of the mitotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle morphology","synonyms":[{"name":"normal mitotic spindle morphology during vegetative growth","type":"exact"},{"name":"normal spindle morphology during mitosis","type":"exact"},{"name":"normal spindle morphology during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0007106"}


id: PBO:0089094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear/mitochondrial metal-dependent protein hydrolase, human MYG1 ortholog","termid":"PBO:0089094"}


id: GO:0008142
data:
  {"annotated_genes":["SJAG_00355","SJAG_01722","SJAG_03718","SJAG_01590","SJAG_02323","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70994,72028,89832,103525,106566,111350],"is_not":false,"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to oxysterol, an oxidized form of cholesterol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol binding","termid":"GO:0032934"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oxysterol binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0008142","terms_by_termid":{"GO:0008142":null}}


id: GO:1903457
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78776],"is_not":false,"summary":null,"term":"GO:1903457"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:8941775","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"lactate catabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"lactate breakdown","type":"exact"},{"name":"lactate catabolism","type":"exact"},{"name":"lactate degradation","type":"exact"}],"termid":"GO:1903457","terms_by_termid":{"GO:1903457":null}}


id: PBO:0064881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP2CA divergent transcript","termid":"PBO:0064881"}


id: PBO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 2, retinal","termid":"PBO:0048031"}


id: GO:0022870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannose(out) = protein histidine + mannose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity","synonyms":[{"name":"mannose PTS transporter activity","type":"exact"}],"termid":"GO:0022870"}


id: PBO:0078659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 12-1","termid":"PBO:0078659"}


id: PBO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P3","termid":"PBO:0047832"}


id: PBO:0059240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L11 pseudogene 3","termid":"PBO:0059240"}


id: PBO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA (predicted)","termid":"PBO:0000062"}


id: GO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Ac)2-L-Lys-D-alanyl-D-alanine + H2O = (Ac)2-L-Lys-D-alanine + D-alanine.","definition_xrefs":["EC:3.4.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"serine-type D-Ala-D-Ala carboxypeptidase activity","secondary_identifiers":["MetaCyc:3.4.16.4-RXN"],"synonyms":[{"name":"D-alanine carboxypeptidase","type":"broad"},{"name":"D-alanyl carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving peptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving-peptidase activity","type":"related"},{"name":"DD-carboxypeptidase","type":"broad"},{"name":"DD-peptidase activity","type":"related"},{"name":"DD-transpeptidase activity","type":"related"}],"termid":"GO:0009002"}


id: PR:O94279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A magnesium-dependent phosphatase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium-dependent phosphatase P8B7.31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.31","secondary_identifiers":["UniProtKB:O94279"],"synonyms":[{"name":"Spom972h-MDP1","type":"exact"}],"termid":"PR:O94279"}


id: PBO:0045980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS homologous factor","termid":"PBO:0045980"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: PATO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000290 absolute respiratory rate (obsolete PATO:0000290)","termid":"PATO:0000290"}


id: GO:0016100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid catabolic process","synonyms":[{"name":"monoterpenoid breakdown","type":"exact"},{"name":"monoterpenoid catabolism","type":"exact"},{"name":"monoterpenoid degradation","type":"exact"}],"termid":"GO:0016100"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: PBO:0083705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER localized heme oxygenase; involved in heme degradation during iron starvation and in the oxidative stress response; expression is regulated by AFT1 and oxidative stress; relocates to the perinuclear region in the presence of oxidants","termid":"PBO:0083705"}


id: PBO:0029840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton","termid":"PBO:0029840"}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_00718","SJAG_04018","SJAG_00642","SJAG_00293","SJAG_01253","SJAG_04384","SJAG_03302","SJAG_01657","SJAG_03501","SJAG_02703","SJAG_03345","SJAG_02104","SJAG_04151","SJAG_04573","SJAG_01150","SJAG_02682","SJAG_01632","SJAG_05304","SJAG_05286","SJAG_03568","SJAG_01585","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84716,84986,85358,88244,89483,93350,97541,99377,101197,105134,107775,108020,111518,113268,113471],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[106945,86887,101252],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[112085,108626,108624,108625],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["GOC:bf","PMID:12923525","GOC:vw","GOC:mah","GOC:signaling","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01632":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02682":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_03568":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006994","GO:0030967","GO:0035104"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: GO:1904486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 17alpha-ethynylestradiol stimulus.","definition_xrefs":["PMID:18805421","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to 17alpha-ethynylestradiol (obsolete GO:1904486)","termid":"GO:1904486"}


id: PBO:0068977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 221, pseudogene","termid":"PBO:0068977"}


id: GO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an atrichoblast, a root epidermal cell that will not give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast differentiation","termid":"GO:0010055"}


id: GO:1904073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["PMID:24508636","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of trophectodermal cell proliferation","synonyms":[{"name":"regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904073"}


id: GO:0060366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the lambdoid suture is generated and organized.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial suture morphogenesis","termid":"GO:0060363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lambdoid suture morphogenesis","termid":"GO:0060366"}


id: GO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a tumor cell that act to protect the cell or organism.","definition_xrefs":["GOC:add","PMID:16730260","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to tumor cell","termid":"GO:0002357"}


id: PBO:0089343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter","termid":"PBO:0089343"}


id: PBO:0077071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THY1 antisense RNA 1","termid":"PBO:0077071"}


id: PBO:0062855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otolin 1","termid":"PBO:0062855"}


id: PBO:0083955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger protein; negatively regulates nitrogen catabolic gene expression by competing with Gat1p for GATA site binding; function requires a repressive carbon source; dimerizes with Dal80p and binds to Tor1p; GZF3 has a paralog, DAL80, that arose from the whole genome duplication","termid":"PBO:0083955"}


id: PBO:0071345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 3","termid":"PBO:0071345"}


id: PBO:0059388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S23 pseudogene 1","termid":"PBO:0059388"}


id: PBO:0040728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCLAF1 and THRAP3 family member 3","termid":"PBO:0040728"}


id: GO:1903326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tRNA metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"regulation of tRNA metabolic process","synonyms":[{"name":"regulation of tRNA metabolism","type":"exact"}],"termid":"GO:1903326"}


id: FYPO:0007495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is normal (i.e. indistinguishable from wild type). The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PMID:24920274","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to Mei2 nuclear dot","synonyms":[{"name":"normal protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"normal protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0007495"}


id: GO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class Ib protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","termid":"GO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-independent","synonyms":[{"name":"TAP-independent antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway","type":"exact"},{"name":"TAP-independent endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class Ib via ER pathway, TAP-independent","type":"exact"}],"termid":"GO:0002490"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: FYPO:0002269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamate-ammonia ligase activity","synonyms":[{"name":"decreased GS activity","type":"exact"},{"name":"decreased glutamine synthetase activity","type":"exact"},{"name":"decreased glutamylhydroxamic synthetase activity","type":"exact"},{"name":"reduced glutamate-ammonia ligase activity","type":"exact"}],"termid":"FYPO:0002269"}


id: GO:1990760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when a change in the osmolarity occurs in the extracellular space of the cell in which the cation channel resides.","definition_xrefs":["PMID:18279313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensor activity","termid":"GO:0005034"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transporter activity","termid":"GO:0022890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0038023","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"osmolarity-sensing monoatomic cation channel activity","synonyms":[{"name":"osmolarity-sensing cation channel activity","type":"broad"}],"termid":"GO:1990760"}


id: PBO:0034651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0034651"}


id: GO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gliogenesis","termid":"GO:0014014"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"negative regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070446"}


id: FYPO:0005984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the dye Congo Red. Cells stop growing (and may die) at a concentration of Congo Red that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to Congo Red","synonyms":[{"name":"hypersensitive to Congo Red","type":"exact"},{"name":"sensitive to Congo Red during mitotic cell cycle","type":"related"},{"name":"sensitive to Congo Red during vegetative growth","type":"exact"}],"termid":"FYPO:0005984"}


id: GO:0033677
data:
  {"annotated_genes":["SJAG_00857","SJAG_04210","SJAG_03780","SJAG_00884","SJAG_02242"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101783,102585,110419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[107737,95354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex, i.e. a double helix in which a strand of DNA pairs with a complementary strand of RNA, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_02242":null,"SJAG_03780":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0033680"],"synonyms":[{"name":"ATP-dependent DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033677","terms_by_termid":{"GO:0033678":null,"GO:0033679":null}}


id: GO:1903687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell migration","termid":"GO:0010633"},{"relation_name":"is_a","term_name":"regulation of border follicle cell migration","termid":"GO:1903684"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell migration","synonyms":[{"name":"inhibition of border follicle cell migration","type":"narrow"}],"termid":"GO:1903687"}


id: GO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte degranulation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"leukocyte degranulation","termid":"GO:0043299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of leukocyte degranulation","synonyms":[{"name":"regulation of immune cell degranulation","type":"exact"},{"name":"regulation of immune cell granule exocytosis","type":"exact"},{"name":"regulation of leucocyte degranulation","type":"exact"},{"name":"regulation of leukocyte granule exocytosis","type":"exact"}],"termid":"GO:0043300"}


id: FYECO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which itraconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ itraconazole","synonyms":[{"name":"+ itraconazole","type":"exact"}],"termid":"FYECO:0000431"}


id: GO:0061409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a freezing stimulus, temperatures below 0 degrees Celsius.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to freezing (obsolete GO:0061409)","termid":"GO:0061409"}


id: SO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a ribozyme.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA_gene","termid":"SO:0002180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribozyme_gene","synonyms":[{"name":"ribozyme gene","type":"exact"}],"termid":"SO:0002181"}


id: GO:0102109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tricaffeoyl spermidine + 3 S-adenosyl-L-methionine = 3 H+ + triferuloyl spermidine + 3 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:19077165","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tricaffeoyl spermidine O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11261"],"termid":"GO:0102109"}


id: PBO:0027092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stably_decreased_rDNA_copy_number_during_vegetative_growth","termid":"PBO:0027092"}


id: PBO:0079550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3","termid":"PBO:0079550"}


id: PBO:0073098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 2","termid":"PBO:0073098"}


id: GO:0046903
data:
  {"annotated_genes":["SJAG_01563","SJAG_01722","SJAG_01448","SJAG_03357","SJAG_02166","SJAG_02004","SJAG_02529","SJAG_03915","SJAG_00355","SJAG_02366","SJAG_01925","SJAG_02572","SJAG_04044","SJAG_02012","SJAG_00661","SJAG_02368","SJAG_03763","SJAG_03864","SJAG_02587","SJAG_00826","SJAG_07004","SJAG_04058","SJAG_04509","SJAG_04966","SJAG_03246","SJAG_03499","SJAG_03938","SJAG_01324","SJAG_03536","SJAG_04517","SJAG_01048","SJAG_00430","SJAG_00280","SJAG_02753","SJAG_03718","SJAG_01697","SJAG_04960","SJAG_03754","SJAG_02320","SJAG_02518","SJAG_00332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100431,84148,112620,78755,84494,70523,92980,108109,90558,77005,83752,109121,71451,73086,87888,98078,112222,72025,86802,90596,70933,87113,71183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[95644],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[83667,89446,71540,93914],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[87948,113853,95722,86260,113251,70097,71543],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[86424,112794,84366,113854,109057,109333,95024,97358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01324":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02529":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"secretion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0046903","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: PBO:0042060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 122","termid":"PBO:0042060"}


id: GO:1905199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a manchette into its constituent components.","definition_xrefs":["GOC:krc","PMID:26792866","GO_REF:0000079","GOC:TermGenie","PMID:24440897","PMID:22319670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"manchette disassembly","termid":"GO:1905199"}


id: PBO:0031548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology","termid":"PBO:0031548"}


id: GO:0140560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine. The enzyme, found in animals and insects, is involved in the biosynthesis of the alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)- beta-D-glucosyl trisaccharide on epidermal growth factor-like (EGF- like) domains.","definition_xrefs":["PMID:22117070","PMID:8982869","RHEA:22820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylosyl alpha-1,3-xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.62"],"termid":"GO:0140560"}


id: GO:0035804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg coat. An egg coat is a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","PMID:16944418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of egg coat","synonyms":[{"name":"structural constituent of vitelline envelope","type":"narrow"},{"name":"structural constituent of zona pellucida","type":"narrow"}],"termid":"GO:0035804"}


id: PBO:0073590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHMT1 pseudogene 1","termid":"PBO:0073590"}


id: GO:0009308
data:
  {"annotated_genes":["SJAG_04904","SJAG_01455","SJAG_01346","SJAG_02505","SJAG_03288","SJAG_05007","SJAG_04481","SJAG_02408","SJAG_03167","SJAG_04868","SJAG_03632","SJAG_00043","SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034217"},{"annotations":[96230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006595"},{"annotations":[75021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[83179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"},{"annotations":[106412],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010967"},{"annotations":[76558,74357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[76560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"},{"annotations":[73237,73694,78107,72846,71310,76223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02408":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03288":null,"SJAG_03632":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_04868":null,"SJAG_04904":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0044106"],"synonyms":[{"name":"amine metabolism","type":"exact"},{"name":"cellular amine metabolic process","type":"exact"}],"termid":"GO:0009308","terms_by_termid":{"GO:0000162":null,"GO:0006595":null,"GO:0006597":null,"GO:0008295":null,"GO:0009447":null,"GO:0010967":null,"GO:0033387":null,"GO:0034217":null}}


id: PR:O59811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 622 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04600","PRO:DNx","PANTHER:PTHR13182:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic 60S subunit biogenesis factor SPCC550.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.15c","secondary_identifiers":["UniProtKB:O59811"],"synonyms":[{"name":"Spom972h-ZNF622","type":"exact"},{"name":"pre-60S factor REI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59811"}


id: PBO:0110323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (JR blood group)","termid":"PBO:0110323"}


id: PBO:0083018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YFR024C was originally annotated as a separate ORF, but was later removed because it was demonstrated to be theC-terminus of LSB3/YFR024C-A","termid":"PBO:0083018"}


id: PR:O94582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp3 gene.","definition_xrefs":["UniProtKB:O94582","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.09","synonyms":[{"name":"Spom972h-trp3","type":"exact"},{"name":"anthranilate synthase component I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94582"}


id: FYPO:0001699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol (PPT). Cells stop growing (and may die) at a concentration of PPT that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to PPT","synonyms":[{"name":"hypersensitive to PPT","type":"exact"},{"name":"sensitive to 4,4',4''-(4-propylpyrazole-1,3,5-triyl)trisphenol","type":"exact"},{"name":"sensitive to PPT during mitotic cell cycle","type":"related"},{"name":"sensitive to PPT during vegetative growth","type":"exact"}],"termid":"FYPO:0001699"}


id: GO:0016261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of selenocysteine, an essential component of glutathione peroxidase and some other proteins.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"selenocysteine catabolic process","synonyms":[{"name":"selenocysteine breakdown","type":"exact"},{"name":"selenocysteine catabolism","type":"exact"},{"name":"selenocysteine degradation","type":"exact"}],"termid":"GO:0016261"}


id: PBO:0051264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-82 (pseudogene)","termid":"PBO:0051264"}


id: PBO:0073924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A12 antisense RNA 1","termid":"PBO:0073924"}


id: GO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.","definition_xrefs":["PMID:10804170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary duct terminal end bud growth","termid":"GO:0060763"}


id: PBO:0087132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein involved in asymmetric localization of ASH1 mRNA; represses translation of ASH1 mRNA, an effect reversed by Yck1p-dependent phosphoryation; regulates telomere position effect and length; similarity to hnRNP-K","termid":"PBO:0087132"}


id: GO:0044812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fermentation of organic substances with a net release of hydrogen.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"fermentative hydrogen production","secondary_identifiers":["Wikipedia:Fermentative_hydrogen_production"],"synonyms":[{"name":"carbohydrate fermentation","type":"exact"}],"termid":"GO:0044812"}


id: GO:0106137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a IkappaB kinase complex.","definition_xrefs":["PMID:12492477","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IkappaB kinase complex binding","termid":"GO:0106137"}


id: PBO:0073874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 2","termid":"PBO:0073874"}


id: PBO:0089756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H dehydrogenase (quinone)","termid":"PBO:0089756"}


id: PBO:0069480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 747, pseudogene","termid":"PBO:0069480"}


id: PBO:0073468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 4","termid":"PBO:0073468"}


id: PBO:0042975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 1 like","termid":"PBO:0042975"}


id: PBO:0065186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and serine rich 3","termid":"PBO:0065186"}


id: FYPO:0002598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"decreased histone H2A phosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced histone H2A phosphorylation","type":"exact"}],"termid":"FYPO:0002598"}


id: PBO:0081022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 3","termid":"PBO:0081022"}


id: PBO:0086226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in the cell wall integrity pathway; functions upstream of Pkc1p; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS; non-tagged Ack1p is detected in purified mitochondria","termid":"PBO:0086226"}


id: GO:0043020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2.","definition_xrefs":["GOC:jl","PMID:11483596","PMID:12440767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"NADPH oxidase complex","synonyms":[{"name":"flavocytochrome b558","type":"narrow"},{"name":"respiratory-burst oxidase","type":"related"}],"termid":"GO:0043020"}


id: GO:0019790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-like hydrolase activity (obsolete GO:0019790)","synonyms":[{"name":"ubiquitin-like hydrolase activity","type":"exact"}],"termid":"GO:0019790"}


id: PBO:0062991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphofurin acidic cluster sorting protein 2","termid":"PBO:0062991"}


id: FYPO:0003891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PMID:11104907","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intragenic meiotic recombination","synonyms":[{"name":"normal meiotic intragenic recombination","type":"exact"}],"termid":"FYPO:0003891"}


id: PBO:0072536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 66","termid":"PBO:0072536"}


id: GO:2000340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 1 production","termid":"GO:2000338"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CXCL1 production","type":"exact"},{"name":"positive regulation of KC production","type":"exact"},{"name":"positive regulation of SCYB1 production","type":"exact"},{"name":"positive regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000340"}


id: PBO:0036032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation_during_cellular_response_to_hydroxyurea","termid":"PBO:0036032"}


id: FYPO:0002978
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during a cellular response to methyl methanesulfonate.","definition_xrefs":["PMID:24006488","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased protein localisation to chromatin during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to MMS","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002978"}


id: GO:0033899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides ending in Ap or Gp with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0140098","GO:0016788"],"is_obsolete":false,"name":"ribonuclease U2 activity","secondary_identifiers":["MetaCyc:3.1.27.3-RXN","MetaCyc:RXN-19928"],"synonyms":[{"name":"RNase U2 activity","type":"related"},{"name":"pleospora RNase activity","type":"exact"},{"name":"purine specific endoribonuclease activity","type":"exact"},{"name":"purine-specific RNase activity","type":"exact"},{"name":"purine-specific ribonuclease activity","type":"exact"},{"name":"ribonuclease (purine) activity","type":"exact"},{"name":"trichoderma koningi RNase III activity","type":"exact"}],"termid":"GO:0033899"}


id: GO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6,N6-dimethyl-L-lysine.","definition_xrefs":["RESID:AA0075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine dimethylation","termid":"GO:0018027"}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: PBO:0087069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L34A; homologous to mammalian ribosomal protein L34, no bacterial homolog; RPL34A has a paralog, RPL34B, that arose from the whole genome duplication","termid":"PBO:0087069"}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["UniProtKB:Q69Z14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: PBO:0073673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein beta 2","termid":"PBO:0073673"}


id: PBO:0077165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLE family member 6, subcortical maternal complex member","termid":"PBO:0077165"}


id: GO:0000276
data:
  {"annotated_genes":["SJAG_03925","SJAG_00542","SJAG_00985","SJAG_MIT15","SJAG_02105","SJAG_07003","SJAG_05204","SJAG_04122","SJAG_MIT37","SJAG_MIT09","SJAG_00133","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70199,88872,89465,90413,97256,103229,114062,114067,114071],"is_not":false,"summary":null,"term":"GO:0000276"},{"annotations":[99054,77932,103142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000274"}]},"cv_name":"cellular_component","definition":"All non-F1 subunits of the mitochondrial hydrogen-transporting ATP synthase, including integral and peripheral mitochondrial inner membrane proteins.","definition_xrefs":["PMID:10838056","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex","termid":"GO:0005753"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0000276","terms_by_termid":{"GO:0000274":null,"GO:0000276":null}}


id: _global:starts
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X starts Y if X is part of Y, and A and Y share a 5' or N-terminal boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts","termid":"_global:starts"}


id: FYPO:0005464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to one or both cell tip(s), but then remains there for a longer or shorter time than normal.","definition_xrefs":["PomBase:mah","PMID:12894167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal maintenance of protein location at cell tip during vegetative growth","synonyms":[{"name":"abnormal maintenance of protein localization at cell tip during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell end during vegetative growth","type":"exact"},{"name":"abnormal maintenance of protein location at cell tip during mitotic cell cycle","type":"related"},{"name":"unstable protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"unstable protein localization to cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005464"}


id: GO:0034836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxy-2-mercaptobenzothiazole + 1/2 O2 = 6,7-dihydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"6-hydroxy-2-mercaptobenzothiazole monooxygenase activity","secondary_identifiers":["EC:1.13.12.-"],"termid":"GO:0034836"}


id: PBO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(11)(p14.2)","termid":"PBO:0047926"}


id: GO:0047511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-methylmalonyl-CoA + H2O = CoA + H+ + methylmalonate.","definition_xrefs":["EC:3.1.2.17","RHEA:17345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"(S)-methylmalonyl-CoA hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02764","MetaCyc:S-METHYLMALONYL-COA-HYDROLASE-RXN"],"synonyms":[{"name":"D-methylmalonyl-coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047511"}


id: GO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of excretion","termid":"GO:0044062"}


id: FYPO:0007137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has an abnormally low volume and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"small multinucleate vegetative cell","synonyms":[{"name":"small multinucleate cell during vegetative growth","type":"exact"},{"name":"small multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007137"}


id: PBO:0017799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 family mitochondrial protein (predicted)","termid":"PBO:0017799"}


id: SO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"TE that has been modified in vitro, including insertion of DNA derived from a source other than the originating TE.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"clone","termid":"SO:0000151"},{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgenic_transposable_element","synonyms":[{"name":"transgenic transposable element","type":"exact"}],"termid":"SO:0000796"}


id: GO:1905274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["PMID:21068295","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: FYPO:0003799
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) in cells that are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal chromatin binding during recovery from nitrogen starvation","synonyms":[{"name":"normal chromatin binding during recovery from nitrogen depletion","type":"exact"},{"name":"normal chromatin binding during recovery from nitrogen deprivation","type":"related"}],"termid":"FYPO:0003799"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: PATO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two or more entities that extend from a common point in different directions.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent from","termid":"PATO:0002424"}


id: GO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the petal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal formation","secondary_identifiers":["GO:0048419"],"termid":"GO:0048451"}


id: PBO:0072912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF chaperone","termid":"PBO:0072912"}


id: PR:Q9P382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup82 gene.","definition_xrefs":["UniProtKB:Q9P382","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.02","synonyms":[{"name":"Spom972h-nup82","type":"exact"},{"name":"nuclear pore protein nup82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P382"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: GO:0150020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendritic tree are generated on the basal neuron side and organized into dendritic branches.","definition_xrefs":["PMID:22683681","GOC:bc","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite arborization","termid":"GO:0140059"},{"relation_name":"is_a","term_name":"basal dendrite morphogenesis","termid":"GO:0150019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite arborization","termid":"GO:0150020"}


id: PBO:0002875
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.4.1","termid":"PBO:0002875"}


id: SO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_noncoding_exon","synonyms":[{"name":"5' nc exon","type":"exact"},{"name":"5' non coding exon","type":"exact"},{"name":"five prime noncoding exon","type":"exact"}],"termid":"SO:0000445"}


id: GO:0002677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"negatively_regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chronic inflammatory response","synonyms":[{"name":"down regulation of chronic inflammatory response","type":"exact"},{"name":"down-regulation of chronic inflammatory response","type":"exact"},{"name":"downregulation of chronic inflammatory response","type":"exact"},{"name":"inhibition of chronic inflammatory response","type":"narrow"}],"termid":"GO:0002677"}


id: PBO:0076890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 44","termid":"PBO:0076890"}


id: GO:0005500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a juvenile hormone, a sesquiterpenoid derivative that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid binding","termid":"GO:0019840"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"juvenile hormone binding","termid":"GO:0005500"}


id: PBO:0087618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the conserved chromosomal passenger complex (CPC); complex regulates mitotic chromosome segregation; not required for the kinase activity of the complex; mediates the interaction of Sli15p and Bir1p; other complex members are Ipl1p, Sli15p, and Bir1p","termid":"PBO:0087618"}


id: GO:0051513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of unidimensional cell growth","termid":"GO:0051510"},{"relation_name":"regulates","term_name":"monopolar cell growth","termid":"GO:0042814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of monopolar cell growth","termid":"GO:0051513"}


id: GO:0120098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that is the site of a developing centriole, which will become a microtubule organizing center. During the canonical pathway of centriole duplication that occurs during the cell division cycle, procentrioles grow at the proximal ends of both mother and daughter centrioles. In the newly divided cells, the original mother and daughter centrioles become mother centrioles while the procentrioles become the new daughter centrioles. Procentrioles can also arise from de novo pathways that occur in multiciliated cells. In ciliated epithelial cells, numerous procentrioles arise form electron dense material referred to as fibrous granules and deuterosomes. The pathway of procentriole formation in multiciliated protists appears to be similar to that in mammalian multiciliated epithelium. In sperm of primative land plants, multiple procentrioles are formed from a blepharoplast giving rise to multicilated sperm cells.","definition_xrefs":["PMID:21289083","PMID:18620859","GOC:krc","PMID:25047614","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"procentriole","termid":"GO:0120098"}


id: GO:0002477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class Ib protein complex. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class Ib here refers to non-classical class I molecules, such as those of the HLA-E gene family.","definition_xrefs":["PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class Ib","termid":"GO:0002428"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class Ib","synonyms":[{"name":"exogenous peptide antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002477"}


id: GO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnono-1,4-lactone + H2O = L-rhamnonate + H+.","definition_xrefs":["EC:3.1.1.65","RHEA:10288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"L-rhamnono-1,4-lactonase activity","secondary_identifiers":["KEGG_REACTION:R03772","MetaCyc:L-RHAMNONO-14-LACTONASE-RXN"],"synonyms":[{"name":"L-rhamno-gamma-lactonase activity","type":"related"},{"name":"L-rhamnono-1,4-lactone lactonohydrolase activity","type":"related"},{"name":"L-rhamnono-gamma-lactonase activity","type":"related"}],"termid":"GO:0050033"}


id: PR:Q9HDV3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP19A11.07c gene.","definition_xrefs":["UniProtKB:Q9HDV3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P19A11.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.07c","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBP19A11.07c","type":"exact"}],"termid":"PR:Q9HDV3"}


id: PR:O13706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hpz2 gene.","definition_xrefs":["UniProtKB:O13706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP-type zinc finger-containing protein C13F5.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.07c","synonyms":[{"name":"Spom972h-hpz2","type":"exact"}],"termid":"PR:O13706"}


id: GO:0042942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which of D-serine, the D-enantiomer of 2-amino-3-hydroxypropanoic acid is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jsg","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"D-serine transmembrane transport","termid":"GO:0042942"}


id: GO:0018687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl + NADH + H+ + O2 = (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+. This reaction requires Fe2+.","definition_xrefs":["EC:1.14.12.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biphenyl 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_enzymeID:e0089","MetaCyc:1.14.12.18-RXN","RHEA:18165"],"synonyms":[{"name":"biphenyl dioxygenase activity","type":"related"},{"name":"biphenyl,NADH:oxygen oxidoreductase (2,3-hydroxylating)","type":"related"}],"termid":"GO:0018687"}


id: PR:Q9P7H7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1782.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ilm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.02c","synonyms":[{"name":"Spom972h-SPAC1782.02c","type":"exact"}],"termid":"PR:Q9P7H7"}


id: PBO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exchange Factor Cdc25-like","termid":"PBO:0004184"}


id: GO:0034275
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034276"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aromatic compound metabolic process","termid":"GO:0006725"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kynurenic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid metabolic process","type":"exact"},{"name":"kynurenic acid metabolism","type":"exact"}],"termid":"GO:0034275","terms_by_termid":{"GO:0034276":null}}


id: PR:Q9P6M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.02c","secondary_identifiers":["UniProtKB:Q9P6M9"],"synonyms":[{"name":"Spom972h-rplA","type":"exact"}],"termid":"PR:Q9P6M9"}


id: GO:0019359
data:
  {"annotated_genes":["SJAG_03298","SJAG_02618","SJAG_00957","SJAG_02889","SJAG_01566","SJAG_01500","SJAG_01582","SJAG_01359","SJAG_03946","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86331,71081,86731,108290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74161,76455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[78507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[78430,71219,76865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinamide nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"nicotinamide nucleotide anabolism","type":"exact"},{"name":"nicotinamide nucleotide biosynthesis","type":"exact"},{"name":"nicotinamide nucleotide formation","type":"exact"},{"name":"nicotinamide nucleotide synthesis","type":"exact"}],"termid":"GO:0019359","terms_by_termid":{"GO:0006741":null,"GO:0009435":null,"GO:0034355":null,"GO:0034356":null}}


id: GO:0072189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter development","termid":"GO:0072189"}


id: PBO:0078015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 5","termid":"PBO:0078015"}


id: PBO:0049869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELZ antisense RNA 1","termid":"PBO:0049869"}


id: PBO:0068887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 128, pseudogene","termid":"PBO:0068887"}


id: PBO:0007024
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds AP-1 site 5'-TGACTCA-3'","termid":"PBO:0007024"}


id: GO:0032939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation in response to oxidative stress","synonyms":[{"name":"activation of translation in response to oxidative stress","type":"narrow"},{"name":"stimulation of translation in response to oxidative stress","type":"narrow"},{"name":"up regulation of translation in response to oxidative stress","type":"exact"},{"name":"up-regulation of translation in response to oxidative stress","type":"exact"},{"name":"upregulation of translation in response to oxidative stress","type":"exact"}],"termid":"GO:0032939"}


id: PBO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 125","termid":"PBO:0071123"}


id: GO:1901793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(3-hydroxyphenyl)propanoate.","definition_xrefs":["GOC:yaf","PMID:10537203","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(3-hydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901793"}


id: PBO:0088302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone disassembly chaperone Ccp1","termid":"PBO:0088302"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["GOC:ai","PMID:15034926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: GO:0016339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules","synonyms":[{"name":"calcium-dependent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016339"}


id: GO:0033771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + O2 + reduced [NADPH--hemoprotein reductase] = a 2-hydroxyflavanone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.162","RHEA:57584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavanone 2-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07198","MetaCyc:RXN-19645"],"synonyms":[{"name":"licodione synthase activity","type":"narrow"}],"termid":"GO:0033771"}


id: PBO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin synthase","termid":"PBO:0005621"}


id: MOD:00461
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a nitrite (NO2) group for a hydrogen atom.","definition_xrefs":["Unimod:354","PubMed:8839040","PubMed:9252331","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrosylation","synonyms":[{"name":"Nitro","type":"related"},{"name":"Nitro (NO2)","type":"exact"},{"name":"Oxidation to nitro","type":"related"}],"termid":"MOD:00461"}


id: GO:0140696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol.","definition_xrefs":["PMID:30498244","RHEA:58664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-2-hydroxyglutarate dehydrogenase activity","secondary_identifiers":["EC:1.1.5.13"],"synonyms":[{"name":"L-2-hydroxyglutarate dehydrogenase activity","type":"exact"}],"termid":"GO:0140696"}


id: PBO:0064481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta pseudogene 1","termid":"PBO:0064481"}


id: FYPO:0004995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of meiosis I","synonyms":[{"name":"normal meiosis I progression","type":"related"},{"name":"normal onset of first meiotic nuclear division","type":"exact"},{"name":"normal timing of meiosis I","type":"related"}],"termid":"FYPO:0004995"}


id: PBO:0051350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-40","termid":"PBO:0051350"}


id: PBO:0074141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member B1","termid":"PBO:0074141"}


id: PBO:0064201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAC8 like 1","termid":"PBO:0064201"}


id: GO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in).","definition_xrefs":["TC:2.A.21.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glucose:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-189208","Reactome:R-HSA-429613","Reactome:R-HSA-5656356","Reactome:R-HSA-8932955","Reactome:R-HSA-5658163"],"synonyms":[{"name":"sodium/glucose symporter activity","type":"exact"}],"termid":"GO:0005412"}


id: GO:0006257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dUDP, deoxyuridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009198"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dUDP metabolic process","termid":"GO:0046077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"dUDP catabolic process","synonyms":[{"name":"dUDP breakdown","type":"exact"},{"name":"dUDP catabolism","type":"exact"},{"name":"dUDP degradation","type":"exact"}],"termid":"GO:0006257"}


id: GO:0048135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a group of interconnected cells derived from a single female gonial founder cell.","definition_xrefs":["GOC:jid","PMID:10370240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst formation","termid":"GO:0048134"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst formation","synonyms":[{"name":"female germline cyst formation","type":"exact"}],"termid":"GO:0048135"}


id: PBO:0084294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intracellular sporulation-specific glucoamylase; involved in glycogen degradation; induced during starvation of a/a diploids late in sporulation, but dispensable for sporulation","termid":"PBO:0084294"}


id: GO:0004121
data:
  {"annotated_genes":["SJAG_03671","SJAG_02205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89232,109127],"is_not":false,"summary":null,"term":"GO:0004121"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.","definition_xrefs":["EC:4.4.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02205":null,"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cystathionine beta-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:13965","GO:0008799","MetaCyc:CYSTATHIONINE-BETA-LYASE-RXN"],"synonyms":[{"name":"L-cystathionine L-homocysteine-lyase (deaminating)","type":"related"},{"name":"L-cystathionine L-homocysteine-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta C-S lyase activity","type":"related"},{"name":"beta-cystathionase activity","type":"related"},{"name":"cystathionine L-homocysteine-lyase (deaminating)","type":"related"},{"name":"cystine lyase activity","type":"related"}],"termid":"GO:0004121","terms_by_termid":{"GO:0004121":null}}


id: PBO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 11","termid":"PBO:0075258"}


id: GO:1901906
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine pentaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine pentaphosphate metabolic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"diadenosine pentaphosphate metabolism","type":"exact"},{"name":"diadenosyl pentaphosphate metabolic process","type":"exact"},{"name":"diadenosyl pentaphosphate metabolism","type":"exact"}],"termid":"GO:1901906","terms_by_termid":{"GO:1901907":null}}


id: GO:0140988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ADP from one side of a membrane to the other according to the reaction: ADP(out) + inorganic phosphate(in) = ADP(in) + inorganic phosphate(out).","definition_xrefs":["PMID:15123600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ADP:inorganic phosphate antiporter activity","secondary_identifiers":["RHEA:65844"],"synonyms":[{"name":"inorganic phosphate:ADP antiporter activity","type":"exact"}],"termid":"GO:0140988"}


id: GO:0045782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell budding","synonyms":[{"name":"activation of cell budding","type":"narrow"},{"name":"positive regulation of budding","type":"broad"},{"name":"stimulation of cell budding","type":"narrow"},{"name":"up regulation of cell budding","type":"exact"},{"name":"up-regulation of cell budding","type":"exact"},{"name":"upregulation of cell budding","type":"exact"}],"termid":"GO:0045782"}


id: PATO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"semi-fertile","termid":"PATO:0001767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male semi-fertile","termid":"PATO:0001761"}


id: PBO:0075440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N5","termid":"PBO:0075440"}


id: PBO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-like transcription factor and archael histone family protein","termid":"PBO:0001505"}


id: PBO:0071451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 57","termid":"PBO:0071451"}


id: GO:0009603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of symbiont","termid":"GO:0009602"},{"relation_name":"is_a","term_name":"response to symbiotic fungus","termid":"GO:0009610"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of symbiotic fungus","synonyms":[{"name":"detection of symbiotic fungi","type":"exact"},{"name":"perception of symbiotic fungi","type":"related"},{"name":"perception of symbiotic fungus","type":"related"}],"termid":"GO:0009603"}


id: PBO:0076887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 38","termid":"PBO:0076887"}


id: PBO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 28","termid":"PBO:0071525"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 8","termid":"PBO:0047355"}


id: PBO:0068372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF157 antisense RNA 1","termid":"PBO:0068372"}


id: RO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is immediately downstream of the sequence of y iff either (1) x and y have sequence units, and all units of x are downstream of all units of y, and x is sequentially adjacent to y, or (2) x and y are sequence units, in which case the immediately downstream relation is primitive and defined by context: for DNA bases, y would be adjacent and 5' to y","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_adjacent_to","termid":"RO:0002515"},{"relation_name":"is_a","term_name":"is_downstream_of_sequence_of","termid":"RO:0002529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_immediately_downstream_of_sequence_of","termid":"RO:0002530"}


id: GO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"positively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis","synonyms":[{"name":"activation of positive chemotaxis","type":"narrow"},{"name":"stimulation of positive chemotaxis","type":"narrow"},{"name":"up regulation of positive chemotaxis","type":"exact"},{"name":"up-regulation of positive chemotaxis","type":"exact"},{"name":"upregulation of positive chemotaxis","type":"exact"}],"termid":"GO:0050927"}


id: PBO:0084049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein; negatively regulates RAS by converting it from the GTP- to the GDP-bound inactive form, required for reducing cAMP levels under nutrient limiting conditions; IRA2 has a paralog, IRA1, that arose from the whole genome duplication; defects in human homolog NF1 are associated with neurofibromatosis","termid":"PBO:0084049"}


id: GO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CD86, a CD marker that occurs on antigen presenting cells that provides co-stimulatory signals necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD86 biosynthetic process","synonyms":[{"name":"CD86 anabolism","type":"exact"},{"name":"CD86 biosynthesis","type":"exact"},{"name":"CD86 formation","type":"exact"},{"name":"CD86 synthesis","type":"exact"}],"termid":"GO:0035781"}


id: GO:0046272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of stilbenes, a class of polyketide compounds formed from cinnamic acid and three molecules of malonyl CoA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stilbene metabolic process","termid":"GO:0009810"},{"relation_name":"is_a","term_name":"aromatic compound catabolic process","termid":"GO:0019439"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"organic cyclic compound catabolic process","termid":"GO:1901361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"stilbene catabolic process","synonyms":[{"name":"stilbene breakdown","type":"exact"},{"name":"stilbene catabolism","type":"exact"},{"name":"stilbene degradation","type":"exact"}],"termid":"GO:0046272"}


id: PBO:0079394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 1","termid":"PBO:0079394"}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: GO:0140502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of host salicylic acid-mediated innate immune signaling.","definition_xrefs":["PMID:30651637","PMID:25438793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of defense-related host salicylic acid-mediated signal transduction pathway","termid":"GO:0052003"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signaling","synonyms":[{"name":"effector-mediated disruption of host salicylic acid-mediated innate immune signalling","type":"exact"},{"name":"effector-mediated suppression of host salicylic acid-mediated innate immune signalling","type":"exact"}],"termid":"GO:0140502"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: SO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal region that may sustain a double-strand break, resulting in a recombination event.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_breakpoint","secondary_identifiers":["SO:0001242"],"synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:chromosome_breakpoint","type":"exact"},{"name":"aberration breakpoint","type":"exact"},{"name":"aberration_junction","type":"exact"},{"name":"chromosome breakpoint","type":"exact"}],"termid":"SO:0001021"}


id: PBO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_start_location","termid":"PBO:0034126"}


id: FYPO:0006461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in telomeric regions during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at telomere during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at telomere during first meiotic nuclear division","type":"exact"},{"name":"increased telomeric histone H2A phosphorylation during meiosis I","type":"exact"}],"termid":"FYPO:0006461"}


id: PBO:0079483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin","termid":"PBO:0079483"}


id: PBO:0090444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small endoribonuclease with 2 transmembrane domains","termid":"PBO:0090444"}


id: PBO:0060148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1","termid":"PBO:0060148"}


id: MOD:01793
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine sulfoxide.","definition_xrefs":["PubMed:17689096","PubMed:18306178","PubMed:18688235","PubMed:11212008"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"S-carboxamidomethyl-L-cysteine","termid":"MOD:01060"},{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"sulfur oxygenated L-cysteine","termid":"MOD:00708"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine sulfoxide","synonyms":[{"name":"CamCO","type":"exact"},{"name":"S-carbamoylmethyl-L-cysteine sulfoxide","type":"exact"}],"termid":"MOD:01793"}


id: PBO:0084218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homolog of nuclear distribution factor NudE; NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends","termid":"PBO:0084218"}


id: PR:Q9C0X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A3.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A3.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.21","synonyms":[{"name":"Spom972h-SPBC29A3.21","type":"exact"}],"termid":"PR:Q9C0X0"}


id: PBO:0002099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase alpha subunit (predicted)","termid":"PBO:0002099"}


id: GO:0071184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-a1, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-a1 complex","synonyms":[{"name":"Pcdhga1-Pcdha4 complex","type":"narrow"}],"termid":"GO:0071184"}


id: PBO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 24","termid":"PBO:0072249"}


id: GO:0007179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor superfamily signaling pathway","termid":"GO:0141091"},{"relation_name":"part_of","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"TGF-beta receptor signaling pathway","type":"exact"},{"name":"TGF-beta receptor signalling pathway","type":"exact"},{"name":"TGFbeta receptor signaling pathway","type":"exact"},{"name":"TGFbeta receptor signalling pathway","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway","type":"exact"}],"termid":"GO:0007179"}


id: GO:1904668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:10921876","GO_REF:0000059","GOC:vw","GOC:dph","PMID:26216882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-protein transferase activity","termid":"GO:0051443"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:1903835","GO:0090623","GO:0051488","GO:0007092"],"synonyms":[{"name":"activation of APC-Cdc20 complex activity","type":"narrow"},{"name":"activation of APC-fizzy related complex activity","type":"narrow"},{"name":"activation of E3","type":"related"},{"name":"activation of anaphase-promoting complex activity","type":"narrow"},{"name":"activation of protein ubiquitination activity","type":"narrow"},{"name":"activation of ubiquitin ligase activity","type":"narrow"},{"name":"activation of ubiquitin protein ligase activity","type":"narrow"},{"name":"positive regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"positive regulation of E3","type":"related"},{"name":"positive regulation of protein ubiquitination activity","type":"exact"},{"name":"positive regulation of ubiquitin ligase activity","type":"related"},{"name":"up regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up regulation of E3","type":"related"},{"name":"up regulation of protein ubiquitination activity","type":"exact"},{"name":"up regulation of ubiquitin ligase activity","type":"exact"},{"name":"up regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"up-regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up-regulation of E3","type":"related"},{"name":"up-regulation of protein ubiquitination activity","type":"exact"},{"name":"up-regulation of ubiquitin ligase activity","type":"exact"},{"name":"up-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"upregulation of APC-fizzy related complex activity","type":"narrow"},{"name":"upregulation of E3","type":"related"},{"name":"upregulation of protein ubiquitination activity","type":"exact"},{"name":"upregulation of ubiquitin ligase activity","type":"exact"},{"name":"upregulation of ubiquitin protein ligase activity","type":"exact"}],"termid":"GO:1904668"}


id: GO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"positively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-4 production","secondary_identifiers":["GO:0150135","GO:0045404"],"synonyms":[{"name":"activation of interleukin-4 production","type":"narrow"},{"name":"positive regulation of IL-4 production","type":"exact"},{"name":"positive regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-4 secretion","type":"narrow"},{"name":"stimulation of interleukin-4 production","type":"narrow"},{"name":"up regulation of interleukin-4 production","type":"exact"},{"name":"up-regulation of interleukin-4 production","type":"exact"},{"name":"upregulation of interleukin-4 production","type":"exact"}],"termid":"GO:0032753"}


id: GO:2001164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001164)","termid":"GO:2001164"}


id: SO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An assembly region that has been sequenced from both ends resulting in a read_pair (mate_pair).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired_end_fragment","synonyms":[{"name":"paired end fragment","type":"exact"}],"termid":"SO:0001790"}


id: GO:0106192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations and their chelates linked to the hydrolysis of a nucleoside triphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates linked to the hydrolysis of a nucleoside triphosphate (obsolete GO:0106192)","termid":"GO:0106192"}


id: GO:0062064
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93011],"is_not":false,"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a box C/D snoRNP complex.","definition_xrefs":["PMID:10679015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNP binding","termid":"GO:0030519"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"box C/D snoRNP complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062064","terms_by_termid":{"GO:0062064":null}}


id: PBO:0061484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuregulin 3","termid":"PBO:0061484"}


id: MOD:00492
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of glycylglycine, the two glycine residues left after tryptic digestion of ubiquitin.","definition_xrefs":["PubMed:11125103","OMSSA:52","RESID:AA0125#var","PubMed:12612601","PubMed:12872131","Unimod:121#K"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"ubiquitination signature dipeptidyl lysine","synonyms":[{"name":"GlyGly","type":"related"},{"name":"N6-(glycylglycyl)lysine","type":"exact"},{"name":"N6-glycylglycyl-L-lysine","type":"exact"},{"name":"glyglyk","type":"exact"},{"name":"ubiquitinylation residue","type":"related"}],"termid":"MOD:00492"}


id: PBO:0087858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator involved in adaptation to weak acid stress; activates transcription of TPO2, YRO2, and other genes encoding membrane stress proteins; HAA1 has a paralog, CUP2, that arose from the whole genome duplication; relocalizes from cytoplasm to nucleus upon DNA replication stress","termid":"PBO:0087858"}


id: PBO:0052014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 4","termid":"PBO:0052014"}


id: GO:0030096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the membrane-derived thylakoid, containing the P680 reaction center. In the light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II","termid":"GO:0009523"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"plasma membrane-derived thylakoid photosystem II","synonyms":[{"name":"plasma membrane photosystem II","type":"exact"}],"termid":"GO:0030096"}


id: MOD:01336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE - identical and redundant with MOD:00657. Remap to MOD:00657.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01336 deamidation followed by a methylation -site Q (obsolete MOD:01336)","synonyms":[{"name":"Deamidation followed by a methylation","type":"related"},{"name":"Methyl+Deamidated","type":"related"}],"termid":"MOD:01336"}


id: PR:Q09781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S1-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.02c","synonyms":[{"name":"S3aE-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps101","type":"exact"}],"termid":"PR:Q09781"}


id: PBO:0085076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear 5' to 3' single-stranded RNA exonuclease; involved in RNA metabolism, including rRNA and snoRNA processing, as well as poly (A+) dependent and independent mRNA transcription termination; required for cotranscriptional pre-rRNA cleavage; displaces Cdk1p from elongating transcripts, especially as RNAPII reaches the poly(A) site, negatively regulates phosphorylation of the CTD of RNAPII, and inhibits RNAPII transcriptional elongation","termid":"PBO:0085076"}


id: PBO:0067966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 268","termid":"PBO:0067966"}


id: GO:0043511
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Heterodimeric hormone composed of an inhibin alpha subunit complexed with either an inhibin beta-A subunit, to form inhibin A, or an inhibin beta-B subunit, to form inhibin B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"inhibin complex","termid":"GO:0043511"}


id: GO:0140964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of auxin within a cell.","definition_xrefs":["PMID:19506555","PMID:22314799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular auxin homeostasis","synonyms":[{"name":"auxin homeostasis","type":"broad"},{"name":"cellular auxin homeostasis","type":"exact"}],"termid":"GO:0140964"}


id: GO:0017165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides Asp-Xaa; does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides.","definition_xrefs":["EC:3.4.13.21"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidase E activity (obsolete GO:0017165)","synonyms":[{"name":"PepE gene product (Salmonella typhimurium) activity","type":"narrow"},{"name":"alpha-aspartyl dipeptidase activity","type":"exact"},{"name":"aspartyl dipeptidase activity","type":"related"},{"name":"dipeptidase E activity","type":"exact"},{"name":"peptidase E activity","type":"broad"}],"termid":"GO:0017165"}


id: PBO:0073728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 9","termid":"PBO:0073728"}


id: PBO:0031217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_replication","termid":"PBO:0031217"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PR:Q10348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease V that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01577","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C1F12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.06c","secondary_identifiers":["UniProtKB:Q10348"],"synonyms":[{"name":"Spom972h-ENDOV","type":"exact"}],"termid":"PR:Q10348"}


id: GO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","PMID:9185563","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin production","termid":"GO:0002377"},{"relation_name":"part_of","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"immunoglobulin production involved in immunoglobulin-mediated immune response","secondary_identifiers":["GO:0002379","GO:0002380"],"synonyms":[{"name":"antibody production during immune response","type":"related"},{"name":"antibody secretion during immune response","type":"related"},{"name":"immunoglobulin biosynthetic process involved in immune response","type":"narrow"},{"name":"immunoglobulin production during immune response","type":"related"},{"name":"immunoglobulin production involved in immune response","type":"related"},{"name":"immunoglobulin production involved in immunoglobulin mediated immune response","type":"exact"},{"name":"immunoglobulin secretion involved in immune response","type":"narrow"}],"termid":"GO:0002381"}


id: FYPO:0003059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of an RNA to chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization","termid":"FYPO:0003058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA localization to chromatin","synonyms":[{"name":"normal RNA localisation to chromatin","type":"exact"}],"termid":"FYPO:0003059"}


id: GO:1905360
data:
  {"annotated_genes":["SJAG_00514","SJAG_00596","SJAG_01794","SJAG_04509","SJAG_00845","SJAG_00457","SJAG_03453","SJAG_03081","SJAG_04026","SJAG_03371","SJAG_02233","SJAG_04266","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85551,99093,99916,89072,83640,86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071521"},{"annotations":[104554,113395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990131"},{"annotations":[104309,109017,89808,101842,102472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of GTPase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","GO_REF:0000088","PMID:9178006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00845":null,"SJAG_01794":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_04026":null,"SJAG_04266":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GTPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRAS-SOS1 complex","type":"narrow"},{"name":"RASH-SOS1 complex","type":"narrow"}],"termid":"GO:1905360","terms_by_termid":{"GO:0005834":null,"GO:0071521":null,"GO:1990131":null}}


