# terms

id: PBO:0042802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine phosphotransferase 1","termid":"PBO:0042802"}


id: MOD:00075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N,N-dimethyl-L-proline.","definition_xrefs":["PubMed:193025","PubMed:3882426","RESID:AA0066","Unimod:529","PubMed:6254758","PubMed:12964758","ChEBI:21451","PubMed:14570711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated-dimethylated residue","termid":"MOD:00710"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline","synonyms":[{"name":"(2S)-2-carboxy-1,1-dimethylpyrrolidinium","type":"exact"},{"name":"1,1-dimethyl-L-prolinium","type":"exact"},{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethyl","type":"related"},{"name":"Dimethylation of proline residue","type":"related"},{"name":"MOD_RES N,N-dimethylproline","type":"exact"},{"name":"N,N-dimethyl-L-proline","type":"exact"},{"name":"N,N-dimethyl-L-prolinium","type":"exact"},{"name":"N,N-dimethylated L-proline","type":"exact"},{"name":"NMe2Pro","type":"exact"},{"name":"stachydrin","type":"exact"}],"termid":"MOD:00075"}


id: GO:0061791
data:
  {"annotated_genes":["SJAG_00031","SJAG_02848","SJAG_02384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100054],"is_not":false,"summary":null,"term":"GO:0061791"},{"annotations":[95441,98193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"A motor activity driven by GTP hydrolysis.","definition_xrefs":["GOC:vw","GOC:dph","PMID:11242086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0003924","GO:0003774"],"is_obsolete":false,"name":"GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061791","terms_by_termid":{"GO:0061791":null,"GO:1990606":null}}


id: FYECO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which queuine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ queuine","termid":"FYECO:0000301"}


id: FYPO:0004299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 5'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished polynucleotide 5'-phosphatase activity","synonyms":[{"name":"polynucleotide 5'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004299"}


id: PBO:0076925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFDP1 pseudogene 1","termid":"PBO:0076925"}


id: PBO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transmembrane helix","termid":"PBO:0000278"}


id: PBO:0054987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2401","termid":"PBO:0054987"}


id: PBO:0062078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 9 pseudogene","termid":"PBO:0062078"}


id: PBO:0053451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 399","termid":"PBO:0053451"}


id: GO:0033178
data:
  {"annotated_genes":["SJAG_02564","SJAG_04015","SJAG_03114","SJAG_01447","SJAG_00915","SJAG_01471","SJAG_02598","SJAG_00136","SJAG_00133","SJAG_00212","SJAG_00438","SJAG_04955","SJAG_01817","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88463,72608],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005754"},{"annotations":[100372,104100,98446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005756"},{"annotations":[77926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045261"},{"annotations":[98090,95490,113763,94424,71311,83791,105161,92161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00438":null,"SJAG_00915":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null,"GO:0005754":null,"GO:0005756":null,"GO:0045261":null}}


id: PBO:0086824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL033W has a paralog, YNL019C, that arose from a segmental duplication","termid":"PBO:0086824"}


id: PBO:0049568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 5","termid":"PBO:0049568"}


id: GO:0007141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process comprising the steps by which a cell progresses through male meiosis I, the first meiotic division in the male germline.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis I","synonyms":[{"name":"male meiosis I nuclear division","type":"exact"}],"termid":"GO:0007141"}


id: PBO:0086552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL034C is not an essential gene","termid":"PBO:0086552"}


id: GO:0031931
data:
  {"annotated_genes":["SJAG_00756","SJAG_00167","SJAG_01320","SJAG_02723","SJAG_01703","SJAG_01509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62676,77185,77641,102005,108239,110098],"is_not":false,"summary":null,"term":"GO:0031931"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Raptor (regulatory-associated protein of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of S6K. In Saccharomyces, the complex contains Kog1p, Lst8p, Tco89p, and either Tor1p or Tor2p.","definition_xrefs":["PMID:21548787","GOC:jh","PMID:15780592","PMID:16469695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00756":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"TORC1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 1","type":"exact"},{"name":"TORC 1 complex","type":"exact"},{"name":"TORC1","type":"exact"},{"name":"dTOR/dRaptor complex","type":"narrow"},{"name":"dTORC1","type":"narrow"},{"name":"mTORC1","type":"narrow"},{"name":"nutrient sensitive complex","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex","type":"exact"}],"termid":"GO:0031931","terms_by_termid":{"GO:0031931":null}}


id: GO:1904079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any negative regulation of transcription from RNA polymerase II promoter that is involved in negative regulation of neuron apoptotic process.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:kmv","PMID:20150917"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process (obsolete GO:1904079)","synonyms":[{"name":"down regulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"down regulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"down regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"down-regulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"downregulation of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"inhibition of global transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron survival","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of global transcription from Pol II promoter involved in neuron survival","type":"related"},{"name":"negative regulation of transcription from Pol II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"negative regulation of transcription from Pol II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in down regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in down-regulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in downregulation of neuron apoptosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of neuron apoptotic process","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in negative regulation of programmed cell death, neurons","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in neuron survival","type":"narrow"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in down regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in down-regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in downregulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in inhibition of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of neuron apoptosis","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of neuron apoptotic process","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in negative regulation of programmed cell death, neurons","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter, global involved in neuron survival","type":"related"}],"termid":"GO:1904079"}


id: PBO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 50","termid":"PBO:0039558"}


id: PBO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD36 molecule","termid":"PBO:0042317"}


id: FYECO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Pantothenate was completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate absent","termid":"FYECO:0000187"}


id: GO:0102788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + pelargonidin 3-O-beta-D-glucoside = pelargonidin 3-O-beta-D-p-coumaroylglucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"4-coumaroyl-CoA:pelargonidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7998"],"termid":"GO:0102788"}


id: PBO:0066390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reeler domain containing 1","termid":"PBO:0066390"}


id: PBO:0086733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene","termid":"PBO:0086733"}


id: PBO:0075276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 19 pseudogene 1","termid":"PBO:0075276"}


id: GO:0045976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle","termid":"GO:0045930"},{"relation_name":"negatively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"down regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through embryonic mitotic cell cycle","type":"narrow"},{"name":"negative regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"negative regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"negative regulation of progression through embryonic mitotic cell cycle","type":"exact"}],"termid":"GO:0045976"}


id: GO:0004639
data:
  {"annotated_genes":["SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76114],"is_not":false,"summary":null,"term":"GO:0004639"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + L-aspartate + ATP = (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:22628","EC:6.3.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02364":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-73805","KEGG_REACTION:R04591","MetaCyc:SAICARSYN-RXN"],"synonyms":[{"name":"4-((N-succinylamino)carbonyl)-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"4-(N-succinocarboxamide)-5-aminoimidazole synthetase activity","type":"related"},{"name":"4-[(N-succinylamino)carbonyl]-5-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate:L-aspartate ligase (ADP-forming)","type":"related"},{"name":"5-aminoimidazole-4-N-succinocarboxamide ribonucleotide synthetase activity","type":"related"},{"name":"PurC","type":"related"},{"name":"SAICAR synthase activity","type":"related"},{"name":"SAICAR synthetase activity","type":"related"},{"name":"SAICARs activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthase activity","type":"related"},{"name":"phosphoribosylaminoimidazole-succinocarboxamide synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthetase activity","type":"related"}],"termid":"GO:0004639","terms_by_termid":{"GO:0004639":null}}


id: PBO:0088697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85a","termid":"PBO:0088697"}


id: GO:0032055
data:
  {"annotated_genes":["SJAG_00169","SJAG_00786","SJAG_03869","SJAG_01942","SJAG_00690","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70247,110750,89956,72395,88429,94831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"regulation of translation in response to stress","termid":"GO:0043555"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"down regulation of translation in response to stress","type":"exact"},{"name":"down-regulation of translation in response to stress","type":"exact"},{"name":"downregulation of translation in response to stress","type":"exact"},{"name":"inhibition of translation in response to stress","type":"narrow"}],"termid":"GO:0032055","terms_by_termid":{"GO:1990625":null}}


id: GO:0080073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a coumaroyl group to a nitrogen atom on the spermidine molecule.","definition_xrefs":["PMID:19077165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"spermidine:coumaroyl CoA N-acyltransferase activity","termid":"GO:0080073"}


id: GO:0044139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth of symbiont on or near host (obsolete GO:0044139)","termid":"GO:0044139"}


id: PR:O94489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.08","synonyms":[{"name":"EF-3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef3","type":"exact"}],"termid":"PR:O94489"}


id: PATO:0000775
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000775 learning value (obsolete PATO:0000775)","termid":"PATO:0000775"}


id: PBO:0087991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase; deaminates adenosine-37 to inosine in tRNA-Ala","termid":"PBO:0087991"}


id: PBO:0038481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 6 (Langereis blood group)","termid":"PBO:0038481"}


id: GO:0106397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R7 cell fate commitment.","definition_xrefs":["PMID:22878552","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of R7 cell fate commitment","termid":"GO:0106396"},{"relation_name":"positively_regulates","term_name":"R7 cell fate commitment","termid":"GO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R7 cell fate commitment","termid":"GO:0106397"}


id: PR:Q10254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.06c","secondary_identifiers":["UniProtKB:Q10254"],"synonyms":[{"name":"Spom972h-ALG10B","type":"exact"},{"name":"alpha-1,2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphoglucose-dependent glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10254"}


id: PBO:0088325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/GATOR1-SEACIT GTPase complex ubiquitin-protein ligase E3 subunit Sea3","termid":"PBO:0088325"}


id: GO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","secondary_identifiers":["EC:1.1.5.-"],"termid":"GO:0016901"}


id: GO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is a branch of a unicellular trichome.","definition_xrefs":["PO:0025537","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome branch","termid":"GO:0090405"}


id: GO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription coregulator binding","termid":"GO:0001221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transcription corepressor binding","secondary_identifiers":["GO:0001226"],"synonyms":[{"name":"RNA polymerase II transcription corepressor binding","type":"related"}],"termid":"GO:0001222"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["GO:0008699","MetaCyc:2.7.7.60-RXN","KEGG_REACTION:R05633"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: PBO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 45","termid":"PBO:0042457"}


id: GO:0098674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the neuronal dense core vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"},{"relation_name":"part_of","term_name":"neuronal dense core vesicle membrane","termid":"GO:0099012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of neuronal dense core vesicle membrane","termid":"GO:0098674"}


id: GO:0051661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a centrosome is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centrosome localization","termid":"GO:0051642"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of centrosome location","synonyms":[{"name":"maintenance of centrosome localization","type":"related"}],"termid":"GO:0051661"}


id: PBO:0029669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_organization","termid":"PBO:0029669"}


id: PBO:0055503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2937","termid":"PBO:0055503"}


id: PBO:0058500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692b","termid":"PBO:0058500"}


id: PBO:0084460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase involved in protein N-glycosylation; member of the KTR1 family; located in the Golgi apparatus; YUR1 has a paralog, KTR2, that arose from the whole genome duplication","termid":"PBO:0084460"}


id: PBO:0053930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1229","termid":"PBO:0053930"}


id: PBO:0026900
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_nitrogen_starvation","termid":"PBO:0026900"}


id: FYPO:0005095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0003744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to chromatin at replication origin","synonyms":[{"name":"abolished protein localisation to chromatin at replication origin during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"protein localization to chromatin at replication origin during vegetative growth abolished","type":"exact"}],"termid":"FYPO:0005095"}


id: PBO:0065978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPA1 related single stranded DNA binding protein, X-linked","termid":"PBO:0065978"}


id: PBO:0081895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 846","termid":"PBO:0081895"}


id: PBO:0003884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carboxylic acid transporter (predicted)","termid":"PBO:0003884"}


id: GO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell wall surrounding a fungal hypha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hyphal cell wall","termid":"GO:0030446"}


id: PBO:0066752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 50","termid":"PBO:0066752"}


id: PR:O36029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4F10.17 gene.","definition_xrefs":["UniProtKB:O36029","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.17","synonyms":[{"name":"Spom972h-SPAC4F10.17","type":"exact"}],"termid":"PR:O36029"}


id: PBO:0086346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; expression is regulated by levels of 5,10-methylene-THF in the cytoplasm","termid":"PBO:0086346"}


id: GO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mannosyl-diinositol phosphorylceramide + H2O = C26-phytoceramide + mannosyldiphosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphorylceramide phospholipase activity","termid":"GO:0052713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"mannosyl-diinositol phosphorylceramide phospholipase activity","termid":"GO:0052715"}


id: PBO:0084563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-bound peptidyl-prolyl cis-trans isomerase (PPIase); binds to the drugs FK506 and rapamycin; expression pattern suggests possible involvement in ER protein trafficking; relocalizes from nucleus to vacuole upon DNA replication stress; mutation is functionally complemented by human FKBP2","termid":"PBO:0084563"}


id: FYPO:0007351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PMID:31811152","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"decreased homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007351"}


id: PBO:0073520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 2","termid":"PBO:0073520"}


id: GO:0003838
data:
  {"annotated_genes":["SJAG_03531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75536],"is_not":false,"summary":null,"term":"GO:0003838"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + zymosterol = fecosterol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:21128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"sterol 24-C-methyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:RXN3O-178","EC:2.1.1.41","GO:0102101"],"synonyms":[{"name":"24-sterol C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-4-methionine:sterol Delta(24)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-4-methionine:sterol delta24-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Delta(24(23))-sterol methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:Delta24(23)-sterol methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:zymosterol 24-C-methyltransferase activity","type":"related"},{"name":"SMT1 activity","type":"narrow"},{"name":"delta(24)-methyltransferase activity","type":"related"},{"name":"delta(24)-sterol C-methyltransferase activity","type":"exact"},{"name":"delta(24)-sterol methyltransferase activity","type":"related"},{"name":"delta24-methyltransferase activity","type":"related"},{"name":"delta24-sterol methyltransferase activity","type":"related"},{"name":"phytosterol methyltransferase activity","type":"narrow"},{"name":"sterol 24C methyltransferase activity","type":"exact"},{"name":"zymosterol-24-methyltransferase activity","type":"narrow"}],"termid":"GO:0003838","terms_by_termid":{"GO:0003838":null}}


id: PBO:0055700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLP homolog, long-term synaptic facilitation factor","termid":"PBO:0055700"}


id: FYPO:0004490
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Transport RNAs are transcribed from genes whose products are involved in one or more transport processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of transport gene mRNA during vegetative growth","synonyms":[{"name":"increased level of transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of transport gene transcripts during vegetative growth","type":"exact"},{"name":"increased transport gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0004490"}


id: GO:0018480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethyl-2-hydroxymuconate semialdehyde + H2O + NAD+ = 5-carboxymethyl-2-hydroxymuconate + NADH + H+.","definition_xrefs":["EC:1.2.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity","secondary_identifiers":["MetaCyc:CHMS-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0365","RHEA:15681"],"synonyms":[{"name":"5-carboxymethyl-2-hydroxymuconic-semialdehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"carboxymethylhydroxymuconic semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0018480"}


id: PBO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 54","termid":"PBO:0072368"}


id: GO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the male urethra over time from its initial formation to the mature structure. The male urethra is a renal system organ that carries urine from the bladder through the penis to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male urethra development","termid":"GO:0061069"}


id: GO:1902813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:mr","PMID:10499580","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:1902813)","synonyms":[{"name":"down regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"down-regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"down-regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"downregulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"downregulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"},{"name":"inhibition of BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"inhibition of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"narrow"},{"name":"inhibition of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"narrow"},{"name":"negative regulation of BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"negative regulation of BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:1902813"}


id: PBO:0082152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy","termid":"PBO:0082152"}


id: PBO:0088525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex zinc finger subunit Yth1","termid":"PBO:0088525"}


id: FYPO:0004183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing papuamide B when cells in the population are undergoing conjugation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on papuamide B during mating","synonyms":[{"name":"normal cell population growth in presence of papuamide B during mating","type":"exact"},{"name":"normal cell population growth on papuamide B during mating","type":"exact"},{"name":"normal cellular response to papuamide B during mating","type":"related"},{"name":"normal growth on papuamide B during conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004183"}


id: PBO:0083917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; negatively regulates Bnr1-mediated actin filament nucleation but not filament elongation; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0083917"}


id: PBO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Z","termid":"PBO:0043848"}


id: PBO:0054681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2089","termid":"PBO:0054681"}


id: PBO:0034352
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-evolutionary_variant_of","termid":"PBO:0034352"}


id: PBO:0057355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-3","termid":"PBO:0057355"}


id: PBO:0066798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 97","termid":"PBO:0066798"}


id: PBO:0031641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_shmoo_formation","termid":"PBO:0031641"}


id: FYPO:0007979
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain interphase microtubule bundles with more microtubules than normal.","definition_xrefs":["PomBase:mlr","PMID:15837798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"increased number of microtubules per bundle during mitotic interphase","termid":"FYPO:0007979"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["MetaCyc:D-GLUTAMYLTRANSFERASE-RXN","RHEA:35623"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: PBO:0038866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADARB2 antisense RNA 1","termid":"PBO:0038866"}


id: PBO:0074201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 11","termid":"PBO:0074201"}


id: GO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (indol-3-yl)acetaldehyde oxime = (indol-3-yl)acetonitrile + H2O.","definition_xrefs":["RHEA:23156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"indoleacetaldoxime dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04093","MetaCyc:RXN-19838","EC:4.8.1.3"],"synonyms":[{"name":"(indol-3-yl)acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"3-indoleacetaldoxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldehyde-oxime hydro-lyase activity","type":"exact"},{"name":"indole-3-acetaldoxime hydro-lyase activity","type":"exact"},{"name":"indoleacetaldoxime hydro-lyase activity","type":"exact"}],"termid":"GO:0047720"}


id: GO:1990103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing DNA-bound DnaA attached to HU. HU is a dimer encoded by two closely related genes. Essential for the initiation of replication in bacteria; stimulates the DnaA-dependent unwinding of oriC.","definition_xrefs":["GOC:bhm","PMID:18179598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DnaA-HU complex","synonyms":[{"name":"DnaA-HU-DNA complex","type":"exact"}],"termid":"GO:1990103"}


id: PBO:0086043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in multidrug resistance; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0086043"}


id: PBO:0066212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 5","termid":"PBO:0066212"}


id: PBO:0081068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC1 pseudogene 1","termid":"PBO:0081068"}


id: PATO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A process quality inhering in a bearer by virtue of the bearer's magnitude of the temporal extent between the starting and ending point.","definition_xrefs":["PATOC:mellybelly"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duration","secondary_identifiers":["PATO:0000081"],"synonyms":[{"name":"period","type":"exact"},{"name":"time","type":"related"}],"termid":"PATO:0001309"}


id: GO:0140061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-hydroxymethylcytosine + 2-oxoglutarate + O2 = 5-formylcytosine + succinate + CO2.","definition_xrefs":["PMID:27918559"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-hydroxymethylcytosine dioxygenase activity (obsolete GO:0140061)","synonyms":[{"name":"5hmC dioxygenase","type":"exact"}],"termid":"GO:0140061"}


id: PBO:0079128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHZ3 antisense RNA 1","termid":"PBO:0079128"}


id: PBO:0087582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0087582"}


id: GO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A calcium ion entry mechanism in the plasma membrane activated by the depletion of calcium ion from the internal calcium ion store in the endoplasmic reticulum.","definition_xrefs":["GOC:hjd","PMID:11120592","PMID:17956991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"store-operated calcium entry","synonyms":[{"name":"SOCE","type":"exact"},{"name":"calcium ion import","type":"broad"},{"name":"capacitative calcium entry","type":"exact"},{"name":"store-operated calcium import","type":"exact"}],"termid":"GO:0002115"}


id: PBO:0088519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1","termid":"PBO:0088519"}


id: GO:0043057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Posterior movement of an organism, e.g. following the direction of the tail of an animal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"directional locomotion","termid":"GO:0033058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"backward locomotion","termid":"GO:0043057"}


id: GO:1905058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any calcium-induced calcium release activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:23639769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-induced calcium release activity","termid":"GO:0048763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:1905058"}


id: GO:0042814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarized growth from one end of a cell.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monopolar cell growth","synonyms":[{"name":"monopolar cell elongation","type":"narrow"},{"name":"monopolar growth","type":"broad"},{"name":"polar cell elongation","type":"narrow"}],"termid":"GO:0042814"}


id: PBO:0086784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0086784"}


id: PBO:0070385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive oxygen species modulator 1","termid":"PBO:0070385"}


id: PBO:0063683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 7","termid":"PBO:0063683"}


id: PBO:0078113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 2","termid":"PBO:0078113"}


id: GO:0005863
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament","termid":"GO:0032982"},{"relation_name":"is_a","term_name":"myofilament","termid":"GO:0036379"},{"relation_name":"part_of","term_name":"sarcomere","termid":"GO:0030017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"striated muscle myosin thick filament","termid":"GO:0005863"}


id: PBO:0036427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein modifier for cullin Ned8","termid":"PBO:0036427"}


id: PBO:0003937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp16 (predicted)","termid":"PBO:0003937"}


id: PATO:0001245
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark brown","termid":"PATO:0001245"}


id: PBO:0073316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydrolase like (pseudogene)","termid":"PBO:0073316"}


id: PBO:0063359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4 like 1","termid":"PBO:0063359"}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: PBO:0075780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 6","termid":"PBO:0075780"}


id: PBO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOCS6 pseudogene 1","termid":"PBO:0075315"}


id: PBO:0004289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Yml6 (predicted)","termid":"PBO:0004289"}


id: GO:0007352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the dorsal/ventral axis of the embryo, through the products of genes expressed in the zygote.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygotic specification of dorsal/ventral axis","synonyms":[{"name":"zygotic determination of dorsal-ventral axis","type":"related"},{"name":"zygotic determination of dorsal/ventral axis","type":"related"},{"name":"zygotic determination of dorsoventral axis","type":"related"}],"termid":"GO:0007352"}


id: GO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a pro-T cell becomes committed to becoming an NK T cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell lineage commitment","termid":"GO:0002363"},{"relation_name":"part_of","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell lineage commitment","synonyms":[{"name":"NK T lymphocyte lineage commitment","type":"exact"},{"name":"NK T-cell lineage commitment","type":"exact"},{"name":"NK T-lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T lymphocyte lineage commitment","type":"exact"},{"name":"natural killer T-cell lineage commitment","type":"exact"},{"name":"natural killer T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002364"}


id: FYECO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in YES containing yeast extract and other components, but without glucose. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no glucose YES","termid":"FYECO:0000422"}


id: GO:0098786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"biofilm matrix organization","termid":"GO:0098784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix disassembly","termid":"GO:0098786"}


id: GO:0102852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-18:3-2-16:0-phosphatidylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-trans-16:1-phosphatidylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","EC:1.14.19.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1-18:3-2-16:0-phosphatidylglycerol desaturase activity","secondary_identifiers":["MetaCyc:RXN-8319"],"termid":"GO:0102852"}


id: PBO:0005123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set1","termid":"PBO:0005123"}


id: GO:0070081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing monoamines.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle","type":"exact"}],"termid":"GO:0070081"}


id: PBO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: GO:0075297
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106448],"is_not":false,"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"negatively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030437","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075297","terms_by_termid":{"GO:0075297":null}}


id: PR:Q9C1X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A D-2-hydroxyglutarate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11748:SF7","OMA:SCHPO02620","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-lactate dehydrogenase C713.03, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.03","secondary_identifiers":["UniProtKB:Q9C1X2"],"synonyms":[{"name":"Spom972h-D2HGDH","type":"exact"}],"termid":"PR:Q9C1X2"}


id: PR:Q9Y819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transmembrane 9 superfamily member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily protein C1105.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.08","secondary_identifiers":["UniProtKB:Q9Y819"],"synonyms":[{"name":"Spom972h-TM9SF2","type":"exact"}],"termid":"PR:Q9Y819"}


id: PBO:0064716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 52","termid":"PBO:0064716"}


id: GO:2000779
data:
  {"annotated_genes":["SJAG_03048","SJAG_01205","SJAG_00823","SJAG_03417"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86577],"is_not":false,"summary":null,"term":"GO:2000779"},{"annotations":[97800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"},{"annotations":[102752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[104623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00823":null,"SJAG_01205":null,"SJAG_03048":null,"SJAG_03417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000779","terms_by_termid":{"GO:0010569":null,"GO:2000779":null,"GO:2001033":null,"GO:2001034":null}}


id: FYPO:0003325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methotrexate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to methotrexate","synonyms":[{"name":"resistance to methotrexate during mitotic cell cycle","type":"related"},{"name":"resistance to methotrexate during vegetative growth","type":"exact"},{"name":"resistant to methotrexate","type":"exact"}],"termid":"FYPO:0003325"}


id: PR:O13787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.09","synonyms":[{"name":"Spom972h-sec62","type":"exact"}],"termid":"PR:O13787"}


id: PBO:0031199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0031199"}


id: SO:0001105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Residues which interact with a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand_binding_site","termid":"SO:0001657"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_ligand_contact","secondary_identifiers":["BS:00157"],"synonyms":[{"name":"polypeptide ligand contact","type":"exact"},{"name":"protein-ligand interaction","type":"related"}],"termid":"SO:0001105"}


id: PBO:0082633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of Dsc E3 ligase complex in Golgi and endosomes; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; diploid deletion strain has high budding index","termid":"PBO:0082633"}


id: GO:1990312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-II cohesin domain of a protein. Type-II cohesin domain is the binding partner of type-II dockerin domain.","definition_xrefs":["PMID:24080387","PMID:23195689","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type-II cohesin domain binding","termid":"GO:1990312"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sakuranetin + O2 + NADPH + H+ = carthamidin-7-methyl ether + H2O + NADP.","definition_xrefs":["GOC:pz","PMID:23184958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: PATO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular quality inhering in a bearer by virtue of the bearer's having all sides of the same length.","definition_xrefs":["PATOC:JB"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equilateral triangular","termid":"PATO:0002306"}


id: GO:0098023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The basal end of the virus tail, which is used by the virus to attach to the host cell.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, tip","synonyms":[{"name":"bacteriophage tail tip","type":"narrow"}],"termid":"GO:0098023"}


id: GO:0052203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052203)","synonyms":[{"name":"modulation of enzyme activity within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052203"}


id: GO:0033174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the chloroplast thylakoid membrane when the entire ATP synthase is assembled. The chloroplast F0 domain contains three alpha, three beta, one gamma, one delta, and one epsilon subunits.","definition_xrefs":["PMID:11032839","GOC:pj","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase complex, catalytic core F(1)","termid":"GO:0045261"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"chloroplast proton-transporting ATP synthase complex","termid":"GO:0045320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast proton-transporting ATP synthase complex, catalytic core CF(1)","synonyms":[{"name":"chloroplast proton-transporting F-type ATPase complex, catalytic core CF(1)","type":"exact"}],"termid":"GO:0033174"}


id: PBO:0005048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght6","termid":"PBO:0005048"}


id: PBO:0064875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 35","termid":"PBO:0064875"}


id: GO:1904352
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94891],"is_not":false,"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["GOC:TermGenie","GOC:rl","PMID:25635054","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"positively_regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein catabolic process in the vacuole","type":"narrow"},{"name":"activation of vacuolar protein breakdown","type":"related"},{"name":"activation of vacuolar protein catabolic process","type":"related"},{"name":"activation of vacuolar protein catabolism","type":"related"},{"name":"activation of vacuolar protein degradation","type":"related"},{"name":"positive regulation of vacuolar protein breakdown","type":"related"},{"name":"positive regulation of vacuolar protein catabolic process","type":"related"},{"name":"positive regulation of vacuolar protein catabolism","type":"related"},{"name":"positive regulation of vacuolar protein degradation","type":"related"},{"name":"up regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up regulation of vacuolar protein breakdown","type":"related"},{"name":"up regulation of vacuolar protein catabolic process","type":"related"},{"name":"up regulation of vacuolar protein catabolism","type":"related"},{"name":"up regulation of vacuolar protein degradation","type":"related"},{"name":"up-regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up-regulation of vacuolar protein breakdown","type":"related"},{"name":"up-regulation of vacuolar protein catabolic process","type":"related"},{"name":"up-regulation of vacuolar protein catabolism","type":"related"},{"name":"up-regulation of vacuolar protein degradation","type":"related"},{"name":"upregulation of protein catabolic process in the vacuole","type":"exact"},{"name":"upregulation of vacuolar protein breakdown","type":"related"},{"name":"upregulation of vacuolar protein catabolic process","type":"related"},{"name":"upregulation of vacuolar protein catabolism","type":"related"},{"name":"upregulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904352","terms_by_termid":{"GO:1904352":null}}


id: PBO:0028819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028819"}


id: SO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U12 small nuclear (snRNA), together with U4atac/U6atac, U5, and U11 snRNAs and associated proteins, forms a spliceosome that cleaves a divergent class of low-abundance pre-mRNA introns.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U12_snRNA"],"synonyms":[{"name":"U12 small nuclear RNA","type":"exact"},{"name":"U12 snRNA","type":"exact"},{"name":"small nuclear RNA U12","type":"exact"},{"name":"snRNA U12","type":"exact"}],"termid":"SO:0000399"}


id: MOD:00136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to pyruvic acid.","definition_xrefs":["PubMed:3042771","Unimod:382","PubMed:10085076","PubMed:8464063","RESID:AA0127#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Cys)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"Pyruv(Cys)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00136"}


id: GO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"regulation of calcium ion (Ca2+) mobilization","type":"exact"},{"name":"regulation of calcium mobilization","type":"exact"},{"name":"regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"exact"},{"name":"regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051279"}


id: PBO:0074195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 5","termid":"PBO:0074195"}


id: GO:0051188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor biosynthetic process (obsolete GO:0051188)","synonyms":[{"name":"cofactor anabolism","type":"exact"},{"name":"cofactor biosynthesis","type":"exact"},{"name":"cofactor formation","type":"exact"},{"name":"cofactor synthesis","type":"exact"}],"termid":"GO:0051188"}


id: GO:0072720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic substance","termid":"GO:0010033"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dithiothreitol","synonyms":[{"name":"response to 1,4-dithiothreitol","type":"exact"},{"name":"response to DTT","type":"exact"}],"termid":"GO:0072720"}


id: PBO:0085857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085857"}


id: PR:O13726
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium/hydrogen exchanger 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01541","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Na(+)/H(+) antiporter C15A10.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.06","secondary_identifiers":["UniProtKB:O13726"],"synonyms":[{"name":"Spom972h-SLC9A9","type":"exact"}],"termid":"PR:O13726"}


id: PBO:0029997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_vegetative_growth","termid":"PBO:0029997"}


id: PBO:0073358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family E member 2","termid":"PBO:0073358"}


id: PATO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased strength","synonyms":[{"name":"weak","type":"exact"}],"termid":"PATO:0001779"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: GO:0071901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}


id: PBO:0029546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_normal_cell_size","termid":"PBO:0029546"}


id: GO:0015824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"proline transport","synonyms":[{"name":"L-proline transport","type":"narrow"}],"termid":"GO:0015824"}


id: PBO:0085228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of evolutionarily-conserved CCR4-NOT regulatory complex; contains single ABC-type ATPase domain but no transmembrane domain; interacts with several subunits of Mediator","termid":"PBO:0085228"}


id: RO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in regulation of p if c enables  'p' and p' causally upstream of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"RO:0002264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of","termid":"RO:0002263"}


id: PR:O74909
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.11c","synonyms":[{"name":"Spom972h-meu23","type":"exact"}],"termid":"PR:O74909"}


id: PBO:0028053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_meiotic_cell_cycle","termid":"PBO:0028053"}


id: FYPO:0007930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of phloxine B and hydrogen peroxide. Cells stop growing (and may die) at concentrations of phloxine B and hydrogen peroxide that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to phloxine B and hydrogen peroxide","termid":"FYPO:0007930"}


id: PBO:0069838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1124, pseudogene","termid":"PBO:0069838"}


id: PBO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Pro (TGG) 1-1","termid":"PBO:0061169"}


id: GO:1903655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 2 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:19328067","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 2 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903655)","termid":"GO:1903655"}


id: PBO:0045367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3","termid":"PBO:0045367"}


id: PBO:0004919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Las1-like protein","termid":"PBO:0004919"}


id: FYPO:0001026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs is abnormal (does not occur, or occurs abnormally).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}


id: PBO:0061846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg like ATPase 1","termid":"PBO:0061846"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: PBO:0084636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase that methylates residue G1575 of 18S rRNA; required for rRNA processing and nuclear export of 40S ribosomal subunits independently of methylation activity; functions with DEAH-box RNA helicase Ecm16p; diploid mutant displays random budding pattern; functional homolog of human WBSCR22","termid":"PBO:0084636"}


id: SO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site to which a polypeptide will bind with a zinc finger motif, which is characterized by requiring one or more Zinc 2+ ions for stabilized folding.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc_finger_binding_site","synonyms":[{"name":"zinc finger binding site","type":"exact"},{"name":"zinc_fing","type":"exact"}],"termid":"SO:0001971"}


id: GO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of amino acid neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"amino acid neurotransmitter reuptake","synonyms":[{"name":"amino acid neurotransmitter import into glial cell","type":"narrow"},{"name":"amino acid neurotransmitter import into neuron","type":"narrow"},{"name":"amino acid neurotransmitter recycling","type":"broad"},{"name":"amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051933"}


id: PBO:0053095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3C","termid":"PBO:0053095"}


id: GO:0034227
data:
  {"annotated_genes":["SJAG_03616","SJAG_03932","SJAG_00358","SJAG_01302","SJAG_00186","SJAG_04113","SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89854,112074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[73600,74012,102239,112294,76399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002143"}]},"cv_name":"biological_process","definition":"The addition a sulfur atom to a nucleotide in a tRNA molecule.","definition_xrefs":["PMID:14722066","GOC:mcc","PMID:12549933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01302":null,"SJAG_03616":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA thio-modification","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"tRNA thiolation","type":"exact"}],"termid":"GO:0034227","terms_by_termid":{"GO:0002143":null,"GO:1990799":null}}


id: PBO:0082912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytidine deaminase; catalyzes the modification of cytidine to uridine in vitro but native RNA substrates have not been identified, localizes to both the nucleus and cytoplasm","termid":"PBO:0082912"}


id: PBO:0088628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1","termid":"PBO:0088628"}


id: PBO:0044840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 128","termid":"PBO:0044840"}


id: GO:0070131
data:
  {"annotated_genes":["SJAG_01517","SJAG_01249","SJAG_04959","SJAG_03550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94216,97355,107888],"is_not":false,"summary":null,"term":"GO:0070131"},{"annotations":[95928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070134"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translation","termid":"GO:0070129"},{"relation_name":"positively_regulates","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01249":null,"SJAG_01517":null,"SJAG_03550":null,"SJAG_04959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial translation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitochondrial protein anabolism","type":"exact"},{"name":"positive regulation of mitochondrial protein biosynthesis","type":"exact"},{"name":"positive regulation of mitochondrial protein formation","type":"exact"},{"name":"positive regulation of mitochondrial protein synthesis","type":"exact"}],"termid":"GO:0070131","terms_by_termid":{"GO:0070131":null,"GO:0070134":null}}


id: PBO:0073042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleraxis bHLH transcription factor","termid":"PBO:0073042"}


id: GO:0034694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin","synonyms":[{"name":"response to prostaglandin stimulus","type":"exact"}],"termid":"GO:0034694"}


id: PBO:0072431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 5","termid":"PBO:0072431"}


id: GO:0002292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive T cell acquires the specialized features of an effector, regulatory, or memory T cell as part of an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation involved in immune response","synonyms":[{"name":"T cell development involved in immune response","type":"related"},{"name":"T cell differentiation during immune response","type":"related"},{"name":"T lymphocyte differentiation during immune response","type":"related"},{"name":"T-cell differentiation during immune response","type":"related"},{"name":"T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002292"}


id: PR:O14098
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsk1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD kinase subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.15","synonyms":[{"name":"CTD kinase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTDK-I subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-lsk1","type":"exact"},{"name":"latrunculin sensitive kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14098"}


id: PBO:0074962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-4","termid":"PBO:0074962"}


id: PBO:0051678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta A","termid":"PBO:0051678"}


id: GO:0005906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin adaptor (obsolete GO:0005906)","synonyms":[{"name":"adaptin","type":"related"},{"name":"clathrin adaptor","type":"exact"}],"termid":"GO:0005906"}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: PBO:0049457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 2","termid":"PBO:0049457"}


id: PBO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like 3","termid":"PBO:0048673"}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: PBO:0039295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG10 alpha-1,2-glucosyltransferase","termid":"PBO:0039295"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: PBO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 13","termid":"PBO:0060112"}


id: PBO:0016082
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SNR128","termid":"PBO:0016082"}


id: PBO:0058513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-3","termid":"PBO:0058513"}


id: GO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine metabolic process","synonyms":[{"name":"dopamine metabolism","type":"exact"}],"termid":"GO:0042417"}


id: PBO:0086499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane phosphatase; involved in the general stress response and inactivating dephosphorylation of Mep2p; required along with Psr1p and binding partner Whi2p for full activation of STRE-mediated gene expression, possibly through Msn2p dephosphorylation, and for inhibition of TORC1 in response to limiting amino acids; regulates the sodium ion stress response with Psr1p; member of the HAD family of protein phosphatases","termid":"PBO:0086499"}


id: PBO:0083555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene ECM8; identified by fungal homology and RT-PCR","termid":"PBO:0083555"}


id: PBO:0108507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cruciform-cutting endonuclease Cce1","termid":"PBO:0108507"}


id: PBO:0040275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atos homolog A","termid":"PBO:0040275"}


id: PBO:0052689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 13","termid":"PBO:0052689"}


id: GO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels","termid":"GO:0010691"}


id: GO:2000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"positively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of fatty acid transport","termid":"GO:2000193"}


id: GO:0032990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a cell part are generated and organized.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell part morphogenesis (obsolete GO:0032990)","termid":"GO:0032990"}


id: FYPO:0009009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell population growth on arginine nitrogen source","synonyms":[{"name":"decreased growth on arginine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on arginine nitrogen source","type":"exact"},{"name":"reduced cell growth on arginine nitrogen source","type":"related"},{"name":"slow cell growth on arginine nitrogen source","type":"narrow"}],"termid":"FYPO:0009009"}


id: PBO:0002942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase Ade4","termid":"PBO:0002942"}


id: FYPO:0001900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small P-bodies","synonyms":[{"name":"small P bodies","type":"exact"},{"name":"small P-body","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies","type":"exact"},{"name":"decreased P-body formation","type":"related"}],"termid":"FYPO:0001900"}


id: GO:0048362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur in the flower stem.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pedicel mucilage metabolic process","synonyms":[{"name":"pedicel mucilage metabolism","type":"exact"}],"termid":"GO:0048362"}


id: PBO:0085982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085982"}


id: GO:0071722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of compounds containing arsenic, including arsenates, arsenites, and arsenides. These include transport of such compounds away from sensitive areas and to compartments or complexes whose purpose is sequestration of arsenic or arsenic-containing compounds.","definition_xrefs":["GOC:kmv","PMID:11313333","PMID:20221439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"},{"relation_name":"part_of","term_name":"response to arsenic-containing substance","termid":"GO:0046685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of arsenic-containing substance","synonyms":[{"name":"detoxification of arsenic","type":"exact"}],"termid":"GO:0071722"}


id: GO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a syntaxin-3 SNAP receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syntaxin binding","termid":"GO:0019905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"syntaxin-3 binding","termid":"GO:0030348"}


id: PBO:0062472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 163 pseudogene","termid":"PBO:0062472"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: PBO:0005422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix PGP phosphatase involved in cardiolipin biosynthesis Gep4 (predicted)","termid":"PBO:0005422"}


id: PBO:0085047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein involved in pre-mRNA splicing; component of a complex containing Cef1p; has similarity to S. pombe Cwf15p","termid":"PBO:0085047"}


id: PBO:0057549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 663b","termid":"PBO:0057549"}


id: PATO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000265 relative visual_ability (obsolete PATO:0000265)","termid":"PATO:0000265"}


id: GO:0016629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-en-1-yl}cyclopentyl]octanoate + NADP+ = (15Z)-12-oxophyto-10,15-dienoate + H+ + NADPH.","definition_xrefs":["EC:1.3.1.42","RHEA:21888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"12-oxophytodienoate reductase activity","secondary_identifiers":["KEGG_REACTION:R03401","MetaCyc:12-OXOPHYTODIENOATE-REDUCTASE-RXN"],"synonyms":[{"name":"12-oxo-phytodienoate reductase activity","type":"exact"},{"name":"12-oxo-phytodienoic acid reductase activity","type":"related"},{"name":"8-[(1R,2R)-3-oxo-2-{(Z)-pent-2-enyl}cyclopentyl]octanoate:NADP+ 4-oxidoreductase activity","type":"related"}],"termid":"GO:0016629"}


id: PBO:0065781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QRSL1 pseudogene 1","termid":"PBO:0065781"}


id: FYPO:0006114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased protein level during mitotic S phase","synonyms":[{"name":"increased protein accumulation during mitotic S phase","type":"related"},{"name":"increased protein level during S phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006114"}


id: GO:0033861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"},{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of NAD(P)H oxidase activity","synonyms":[{"name":"down regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"down-regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"downregulation of NAD(P)H oxidase activity","type":"exact"},{"name":"inhibition of NAD(P)H oxidase activity","type":"narrow"}],"termid":"GO:0033861"}


id: PBO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 27","termid":"PBO:0070797"}


id: GO:0141096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A DNA-binding transcription repressor activity regulated by binding to a ligand and that inhibits the transcription of specific genes and gene sets.","definition_xrefs":["PMID:21555518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription repressor activity","termid":"GO:0001217"},{"relation_name":"is_a","term_name":"ligand-activated transcription factor activity","termid":"GO:0098531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0001217"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0140110","GO:0003674","GO:0001217","GO:0003700"],"is_obsolete":false,"name":"ligand-activated transcription repressor activity","termid":"GO:0141096"}


id: GO:0140242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Translation that occurs at the postsynapse.","definition_xrefs":["PMID:20427644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation at synapse","termid":"GO:0140241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translation at postsynapse","termid":"GO:0140242"}


id: GO:0042268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytolysis","termid":"GO:0042268"}


id: PBO:0034316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sequentially_related_to","termid":"PBO:0034316"}


id: GO:0071705
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id: GO:0030308
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell growth","type":"exact"},{"name":"down-regulation of cell growth","type":"exact"},{"name":"downregulation of cell growth","type":"exact"},{"name":"inhibition of cell growth","type":"narrow"}],"termid":"GO:0030308","terms_by_termid":{"GO:0051517":null}}


id: PBO:0081239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 8","termid":"PBO:0081239"}


id: SO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby two genes, on the same strand have become joined.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_fusion","termid":"SO:0001565"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unidirectional_gene_fusion","synonyms":[{"name":"unidirectional gene fusion","type":"exact"}],"termid":"SO:0002085"}


id: GO:0043004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein with specific molecules in the cytoplasm, thereby inhibiting its transport to the cell membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic sequestering of CFTR protein (obsolete GO:0043004)","synonyms":[{"name":"cytoplasmic retention of CFTR (cystic fibrosis transmembrane conductance regulator) protein","type":"exact"},{"name":"cytoplasmic sequestering of cystic fibrosis transmembrane conductance regulator protein","type":"exact"},{"name":"cytoplasmic sequestration of CFTR (cystic fibrosis transmembrane conductance regulator protein)","type":"exact"},{"name":"cytoplasmic storage of CFTR (cystic fibrosis transmembrane conductance regulator) protein","type":"exact"},{"name":"maintenance of CFTR protein location in cytoplasm","type":"exact"},{"name":"retention of CFTR (cystic fibrosis transmembrane conductance regulator) protein in cytoplasm","type":"exact"},{"name":"sequestering of CFTR (cystic fibrosis transmembrane conductance regulator protein) in cytoplasm","type":"exact"},{"name":"sequestration of CFTR (cystic fibrosis transmembrane conductance regulator protein) in cytoplasm","type":"exact"},{"name":"storage of CFTR (cystic fibrosis transmembrane conductance regulator) protein in cytoplasm","type":"exact"}],"termid":"GO:0043004"}


id: GO:1901413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0033013","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901413"}


id: GO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell negative selection","synonyms":[{"name":"central B lymphocyte negative selection","type":"exact"},{"name":"central B-cell negative selection","type":"exact"},{"name":"central B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002354"}


id: PBO:0059941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 27","termid":"PBO:0059941"}


id: PATO:0002459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a sepal,","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepal-like","termid":"PATO:0002459"}


id: GO:0071124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tyrosine-protein phosphatase non-receptor type 2.","definition_xrefs":["PMID:15592458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tyrosine-protein phosphatase non-receptor type 2 complex","synonyms":[{"name":"ITGA1-ITGB1-PTPN2 complex","type":"narrow"}],"termid":"GO:0071124"}


id: PBO:0079931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase","termid":"PBO:0079931"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: FYPO:0009003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion does not occur, despite the nuclei and their SPBs coming together.","definition_xrefs":["PMID:36650056","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear fusion with normal nuclear congression during mating","synonyms":[{"name":"nuclear congression without nuclear fusion","type":"exact"}],"termid":"FYPO:0009003"}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: PBO:0063177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polybromo 1","termid":"PBO:0063177"}


id: GO:0008296
data:
  {"annotated_genes":["SJAG_02818","SJAG_02298","SJAG_02908","SJAG_01163","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74575,74924],"is_not":false,"summary":null,"term":"GO:0008296"},{"annotations":[72949,84291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008311"},{"annotations":[73671,84294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01163":null,"SJAG_02298":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0004527","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"3'-5'-DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-9023943"],"synonyms":[{"name":"3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"3'-5'-exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0008296","terms_by_termid":{"GO:0008296":null,"GO:0008310":null,"GO:0008311":null}}


id: PBO:0071002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 4","termid":"PBO:0071002"}


id: PBO:0077136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor protein","termid":"PBO:0077136"}


id: GO:1900142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell apoptotic process","termid":"GO:0034351"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte apoptotic process","termid":"GO:1900141"},{"relation_name":"negatively_regulates","term_name":"oligodendrocyte apoptotic process","termid":"GO:0097252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oligodendrocyte apoptotic process","synonyms":[{"name":"down regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"down-regulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"down-regulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"downregulation of oligodendrocyte apoptosis","type":"narrow"},{"name":"downregulation of oligodendrocyte apoptotic process","type":"exact"},{"name":"inhibition of oligodendrocyte apoptosis","type":"narrow"},{"name":"inhibition of oligodendrocyte apoptotic process","type":"narrow"},{"name":"negative regulation of oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:1900142"}


id: PBO:0065997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene B","termid":"PBO:0065997"}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: PBO:0076591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 12","termid":"PBO:0076591"}


id: PBO:0074875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 57","termid":"PBO:0074875"}


id: GO:0032129
data:
  {"annotated_genes":["SJAG_04186","SJAG_01075","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104773],"is_not":false,"summary":null,"term":"GO:0032129"},{"annotations":[109611,99608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0019213","GO:0003824","GO:0003674","GO:0140096","GO:0033558"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K9 deacetylase activity","type":"exact"},{"name":"histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032129","terms_by_termid":{"GO:0032129":null,"GO:0046969":null}}


id: PBO:0081490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385B","termid":"PBO:0081490"}


id: GO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in conjugation (obsolete GO:0000767)","termid":"GO:0000767"}


id: GO:0140273
data:
  {"annotated_genes":["SJAG_03048","SJAG_00082","SJAG_01805","SJAG_01837","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85696,97816,89410,111806,106451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle process where kinetochore microtubule attachment defects are corrected.","definition_xrefs":["PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repair of kinetochore microtubule attachment defect","termid":"GO:0140274"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic metaphase chromosome alignment","termid":"GO:0007080"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"repair of mitotic kinetochore microtubule attachment defect","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"correction of mitotic kinetochore microtubule attachment defects","type":"exact"},{"name":"repair of mitotic kinetochore microtubule attachment defects","type":"exact"}],"termid":"GO:0140273","terms_by_termid":{"GO:0140429":null}}


id: FYPO:0003564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is abnormal.","definition_xrefs":["GO:0042138","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic DNA double-strand break formation","termid":"FYPO:0003564"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PR:O94582
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.09","synonyms":[{"name":"Spom972h-trp3","type":"exact"},{"name":"anthranilate synthase component I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94582"}


id: GO:1901748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene D4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"leukotriene D4 metabolic process","synonyms":[{"name":"leukotriene D4 metabolism","type":"exact"}],"termid":"GO:1901748"}


id: GO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["PMID:8618927","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010673)","synonyms":[{"name":"activation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"stimulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010673"}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: PBO:0086800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR285W is not an essential gene","termid":"PBO:0086800"}


id: PBO:0029489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_abnormal_cell_shape,_normal_cell_size_(obsolete_FYPO:0002226)","termid":"PBO:0029489"}


id: GO:0051649
data:
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id: PBO:0046351
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id: GO:0043864
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id: GO:0033532
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id: FYPO:0006936
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id: PBO:0046911
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id: PBO:0028667
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id: GO:1900305
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id: PBO:0016124
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id: GO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats.","definition_xrefs":["PMID:12044938","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"formation of extrachromosomal circular DNA","synonyms":[{"name":"assembly of extrachromosomal circular DNA","type":"exact"}],"termid":"GO:0001325"}


id: MOD:01447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-(dihydroxymethyl)-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:12595263","PubMed:9159480","RESID:AA0493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(dihydroxymethyl)-L-methionine (Met)","synonyms":[{"name":"(2S)-2-[(dihydroxymethyl)amino]-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-(dihydroxymethyl)-L-methionine","type":"exact"},{"name":"N-formyl-L-methionine hydrate","type":"exact"},{"name":"N-orthoformylmethionine","type":"exact"}],"termid":"MOD:01447"}


id: SO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for methylation_guide_snoRNA. A snoRNA that specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C_D_box_snoRNA_gene","termid":"SO:0002375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylation_guide_snoRNA_gene","synonyms":[{"name":"methylation guide snoRNA gene","type":"exact"}],"termid":"SO:0002379"}


id: GO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"plastid DNA metabolic process","termid":"GO:0033258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"plastid DNA replication","synonyms":[{"name":"plastid DNA synthesis","type":"related"},{"name":"replication of plastid DNA","type":"exact"}],"termid":"GO:0033259"}


id: PBO:0047690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fms related receptor tyrosine kinase 3","termid":"PBO:0047690"}


id: PBO:0034490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore,_lagging_chromosomes,_and_normal_chromosome_separation","termid":"PBO:0034490"}


id: PATO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000391 intense (obsolete PATO:0000391)","termid":"PATO:0000391"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: GO:0032186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of a septin ring located at the bud neck.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring organization","termid":"GO:0031106"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"part_of","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281","GO:0007010"],"is_obsolete":false,"name":"cellular bud neck septin ring organization","synonyms":[{"name":"cellular bud neck septin ring organisation","type":"exact"}],"termid":"GO:0032186"}


id: GO:0075502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Induction of endosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus through the endosomal pathway, and results in delivery of the virus contents into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeabilization of host organelle membrane involved in viral entry into host cell","termid":"GO:0039665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome membrane permeabilization involved in viral entry into host cell","secondary_identifiers":["GO:0075518"],"synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome membrane","type":"related"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by endosome membrane permeabilization","type":"related"}],"termid":"GO:0075502"}


id: PBO:0001792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta4","termid":"PBO:0001792"}


id: PR:Q10253
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug64 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 64 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.05c","synonyms":[{"name":"Spom972h-mug64","type":"exact"}],"termid":"PR:Q10253"}


id: PBO:0003221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Cti6","termid":"PBO:0003221"}


id: PBO:0074677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 61","termid":"PBO:0074677"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:jl","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: PBO:0081955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 2","termid":"PBO:0081955"}


id: PBO:0110511
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKyrin repeats","termid":"PBO:0110511"}


id: PBO:0109086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 like, pseudogene","termid":"PBO:0109086"}


id: PBO:0059373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 6","termid":"PBO:0059373"}


id: GO:0046860
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a glycosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal membrane","termid":"GO:0005778"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"glycosome membrane","termid":"GO:0046860"}


id: PBO:0052901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-12","termid":"PBO:0052901"}


id: GO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coatomer (obsolete GO:0005799)","synonyms":[{"name":"COPI vesicle","type":"related"},{"name":"coatomer","type":"exact"}],"termid":"GO:0005799"}


id: PBO:0074072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 47","termid":"PBO:0074072"}


id: SO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Aneuploid"],"termid":"SO:0000054"}


id: PBO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 3 (pseudogene)","termid":"PBO:0044716"}


id: GO:0034537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-3-methylbenzalpyruvate + H2O = pyruvate + 3-methylsalicylaldehyde.","definition_xrefs":["PMID:8042906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-3-methylbenzalpyruvate hydratase-aldolase activity","secondary_identifiers":["UM-BBD_reactionID:r0783"],"termid":"GO:0034537"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: GO:0021865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The mitotic division of a radial glial cell giving rise to two new radial glial cells in the forebrain.","definition_xrefs":["GOC:jid","PMID:16226447","GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete symmetric radial glial cell division in forebrain (obsolete GO:0021865)","termid":"GO:0021865"}


id: PBO:0077524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 238 like","termid":"PBO:0077524"}


id: GO:1902040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed dormancy process.","definition_xrefs":["PMID:23378449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed dormancy process","synonyms":[{"name":"activation of seed dormancy","type":"related"},{"name":"activation of seed dormancy process","type":"narrow"},{"name":"positive regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy process","type":"exact"},{"name":"up-regulation of seed dormancy","type":"related"},{"name":"up-regulation of seed dormancy process","type":"exact"},{"name":"upregulation of seed dormancy","type":"related"},{"name":"upregulation of seed dormancy process","type":"exact"}],"termid":"GO:1902040"}


id: GO:0090023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"positively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil chemotaxis","termid":"GO:0090023"}


id: FYPO:0001278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which MCM complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal MCM complex assembly","synonyms":[{"name":"normal MCM complex assembly during mitotic cell cycle","type":"related"},{"name":"normal MCM complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001278"}


id: PBO:0076993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 8","termid":"PBO:0076993"}


id: GO:0039531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cytoplasmic pattern recognition receptor signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"regulation of MAV signaling","type":"narrow"},{"name":"regulation of cytosolic pattern recognition receptor signaling pathway","type":"exact"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"regulation of viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"narrow"}],"termid":"GO:0039531"}


id: FYPO:0007355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell contains more Smp foci than normal.","definition_xrefs":["PMID:31811152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Smp foci","synonyms":[{"name":"increased number of Sme2 foci","type":"narrow"},{"name":"increased number of Smp dots","type":"exact"}],"termid":"FYPO:0007355"}


id: FYPO:0004004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pre-replicative complex assembly","synonyms":[{"name":"normal pre-RC assembly","type":"exact"},{"name":"normal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"normal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"normal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0004004"}


id: PBO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 58 pseudogene","termid":"PBO:0070144"}


id: PBO:0055512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2946","termid":"PBO:0055512"}


id: PBO:0067797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 99","termid":"PBO:0067797"}


id: GO:1904514
data:
  {"annotated_genes":["SJAG_03048","SJAG_03438","SJAG_03720","SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84782,97809,101981,111378],"is_not":false,"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"positive regulation of initiation of premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of initiation of meiotic DNA synthesis","type":"related"},{"name":"activation of initiation of premeiotic DNA replication","type":"narrow"},{"name":"activation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"activation of meiotic DNA replication initiation","type":"related"},{"name":"activation of premeiotic DNA replication initiation","type":"narrow"},{"name":"positive regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"positive regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"positive regulation of meiotic DNA replication initiation","type":"related"},{"name":"positive regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up regulation of meiotic DNA replication initiation","type":"related"},{"name":"up regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up-regulation of meiotic DNA replication initiation","type":"related"},{"name":"up-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"upregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"upregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"upregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"upregulation of meiotic DNA replication initiation","type":"related"},{"name":"upregulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904514","terms_by_termid":{"GO:1904514":null}}


id: PBO:0029348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nuclear_tRNA_processing_intermediates_with_3'_extensions","termid":"PBO:0029348"}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: PBO:0057994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3918","termid":"PBO:0057994"}


id: PBO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.19","termid":"PBO:0002335"}


id: GO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + monoamine(in) = H+(in) + monoamine(out).","definition_xrefs":["TC:2.A.1.2.12","TC:2.A.1.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monoamine:proton antiporter activity","synonyms":[{"name":"monoamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015311"}


id: PBO:0028124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_pear-shaped_vegetative_cell","termid":"PBO:0028124"}


id: PBO:0073368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 1","termid":"PBO:0073368"}


id: PBO:0081636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 564","termid":"PBO:0081636"}


id: PBO:0028471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cytochrome_absorption_spectrum","termid":"PBO:0028471"}


id: PBO:0064142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKN2 antisense RNA 1","termid":"PBO:0064142"}


id: PBO:0053572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 592","termid":"PBO:0053572"}


id: GO:1901294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of DNA binding that results in negative regulation of a SREBP signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:22017871"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by negative regulation of DNA binding (obsolete GO:1901294)","synonyms":[{"name":"inhibition of SREBP-dependent transcription by blocking DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signaling pathway by negative regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by down-regulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by downregulation of DNA binding","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by inhibition of DNA binding","type":"narrow"},{"name":"negative regulation of SREBP-mediated signalling pathway by negative regulation of DNA binding","type":"exact"}],"termid":"GO:1901294"}


id: PBO:0051872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat 2","termid":"PBO:0051872"}


id: GO:1905287
data:
  {"annotated_genes":["SJAG_00256","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83615,96850],"is_not":false,"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any positive regulation of G2/M transition of mitotic cell cycle that is involved in cellular response to nitrogen starvation.","definition_xrefs":["GOC:TermGenie","PMID:26776736","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010971"},{"relation_name":"part_of","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_03309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772"],"is_obsolete":false,"name":"positive regulation of G2/M transition of mitotic cell cycle involved in cellular response to nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of mitotic entry involved in cellular response to nitrogen starvation","type":"exact"}],"termid":"GO:1905287","terms_by_termid":{"GO:1905287":null}}


id: PBO:0060931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 2","termid":"PBO:0060931"}


id: PBO:0069292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 548, pseudogene","termid":"PBO:0069292"}


id: GO:0070467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains DNA ligase III, DNA polymerase epsilon, a 5'-3' exonuclease, and the SMC1 and SMC2 proteins, and is involved in recombinational repair of deletions and gaps in DNA.","definition_xrefs":["PMID:8392064","PMID:8670910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RC-1 DNA recombination complex","synonyms":[{"name":"DNA recombination complex RC-1","type":"exact"},{"name":"RC-1 complex (recombination complex 1)","type":"exact"}],"termid":"GO:0070467"}


id: PBO:0056072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G5C","termid":"PBO:0056072"}


id: PBO:0062076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 7 pseudogene","termid":"PBO:0062076"}


id: PBO:0065934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 8","termid":"PBO:0065934"}


id: GO:0014807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitogenesis.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitogenesis","termid":"GO:0014807"}


id: GO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.","definition_xrefs":["GOC:nc","GOC:BHF","GOC:BHF_telomere","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomeric loop disassembly","synonyms":[{"name":"T loop disassembly","type":"exact"},{"name":"t-loop disassembly","type":"exact"}],"termid":"GO:0090657"}


id: GO:0050634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isovaleryl-CoA + 3 malonyl-CoA = 4 CoASH + 3 CO2 + 3-methyl-1-(2,4,6-trihydroxyphenyl)butan-1-one.","definition_xrefs":["MetaCyc:2.3.1.156-RXN","EC:2.3.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"phloroisovalerophenone synthase activity","secondary_identifiers":["RHEA:23572"],"synonyms":[{"name":"3-methyl-1-(trihydroxyphenyl)butan-1-one synthase activity","type":"related"},{"name":"isovaleryl-CoA:malonyl-CoA acyltransferase activity","type":"related"},{"name":"valerophenone synthase activity","type":"related"}],"termid":"GO:0050634"}


id: PBO:0087477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of box H/ACA snoRNP complex; required for pseudouridylation and processing of pre-18S rRNA","termid":"PBO:0087477"}


id: PBO:0075363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 3","termid":"PBO:0075363"}


id: PBO:0077654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 4","termid":"PBO:0077654"}


id: GO:0006844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acyl carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"acyl carnitine transport","termid":"GO:0006844"}


id: PR:O42634
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein DMC1/LIM15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein dmc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.03c","secondary_identifiers":["UniProtKB:O42634"],"synonyms":[{"name":"Spom972h-DMC1","type":"exact"}],"termid":"PR:O42634"}


id: PBO:0039419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin 2","termid":"PBO:0039419"}


id: GO:0003906
data:
  {"annotated_genes":["SJAG_02298","SJAG_03724","SJAG_03665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72950],"is_not":false,"summary":null,"term":"GO:0003906"},{"annotations":[91710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[112846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140080"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of the C-O-P bond in the AP site created when DNA glycosylase removes a damaged base, involved in the DNA base excision repair pathway (BER).","definition_xrefs":["Wikipedia:AP_endonuclease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03665":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5649711","Reactome:R-HSA-5649725","Reactome:R-HSA-110375"],"synonyms":[{"name":"AP deoxyendoribonuclease activity","type":"exact"},{"name":"UV endonuclease","type":"broad"},{"name":"abasic deoxyendoribonuclease activity","type":"exact"},{"name":"apurinic deoxyendoribonuclease activity","type":"exact"},{"name":"apurinic/apyrimidinic endodeoxyribonuclease activity","type":"exact"},{"name":"apyrimidinic deoxyendoribonuclease activity","type":"exact"},{"name":"deoxyribonuclease (apurinic or apyrimidinic) activity","type":"exact"},{"name":"endonuclease VIII activity","type":"related"}],"termid":"GO:0003906","terms_by_termid":{"GO:0003906":null,"GO:0140078":null,"GO:0140080":null}}


id: FYPO:0005124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from early meiotic genes measured in a cell is higher than normal. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:al","PMID:17927811","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of early meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of early meiotic genes during late meiosis","type":"exact"},{"name":"increased level of early meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of early meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of early meiotic gene mRNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of early meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0005124"}


id: PBO:0081796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 726","termid":"PBO:0081796"}


id: GO:0061472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Process whereby karyomere membranes fuse during interphase to form a single lobed nucleus.","definition_xrefs":["PMID:2734396","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"karyomere membrane fusion","termid":"GO:0061472"}


id: PR:Q9Y8G3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear RNA export factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor mex67 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.03c","secondary_identifiers":["UniProtKB:Q9Y8G3"],"synonyms":[{"name":"SPBC1921.03c","type":"related"},{"name":"Spom972h-NXF1","type":"exact"}],"termid":"PR:Q9Y8G3"}


id: GO:1901964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:21419760","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in outflow tract morphogenesis","termid":"GO:1901963"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000138"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in outflow tract morphogenesis","termid":"GO:0061325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in outflow tract morphogenesis","synonyms":[{"name":"activation of cell proliferation involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of cell proliferation involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1901964"}


id: GO:0043800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabino-3-hexulose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["MetaCyc:R12-RXN","PMID:11839305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"hexulose-6-phosphate isomerase activity","secondary_identifiers":["EC:5.3.1.27","RHEA:25900"],"synonyms":[{"name":"HUMPI","type":"exact"}],"termid":"GO:0043800"}


id: GO:1990098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing at least one DNA helicase and one primase. Can also contain associated proteins. The helicase component continues to unwind the double-stranded DNA (dsDNA) and the primase component synthesizes a RNA primer during initiation or restart of replication.","definition_xrefs":["GOC:bhm","PMID:21856207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"core primosome complex","synonyms":[{"name":"core primosome","type":"exact"}],"termid":"GO:1990098"}


id: PBO:0073857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A6","termid":"PBO:0073857"}


id: PBO:0086472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; DPI35 is not an essential gene","termid":"PBO:0086472"}


id: PBO:0071278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL26L1 antisense RNA 1","termid":"PBO:0071278"}


id: PBO:0061693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210 pseudogene 1","termid":"PBO:0061693"}


id: PBO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit, guanyl-nucleotide exchange factor (eEF1B)","termid":"PBO:0018187"}


id: FYPO:0002319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lanosterol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular sterol level","termid":"FYPO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular lanosterol level","synonyms":[{"name":"increased cellular lanosterol level during mitotic cell cycle","type":"related"},{"name":"increased cellular lanosterol level during vegetative growth","type":"exact"},{"name":"increased lanosterol accumulation","type":"related"}],"termid":"FYPO:0002319"}


id: PR:O14128
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pil2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid long chain base-responsive protein pil2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.02c","synonyms":[{"name":"Spom972h-pil2","type":"exact"},{"name":"protein kinase inhibitor pil2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14128"}


id: GO:0004559
data:
  {"annotated_genes":["SJAG_05272","SJAG_02711","SJAG_04850","SJAG_03032","SJAG_01858","SJAG_01883","SJAG_04851","SJAG_00310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84057],"is_not":false,"summary":null,"term":"GO:0004559"},{"annotations":[92478,97680,97689,97690,113809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008496"},{"annotations":[91279,67009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides.","definition_xrefs":["EC:3.2.1.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosidase activity","termid":"GO:0015923"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00310":null,"SJAG_01858":null,"SJAG_01883":null,"SJAG_02711":null,"SJAG_03032":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"alpha-mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6799545","Reactome:R-HSA-9694656","MetaCyc:3.2.1.24-RXN","Reactome:R-HSA-8853686"],"synonyms":[{"name":"1,2-alpha-D-mannosidase activity","type":"narrow"},{"name":"1,2-alpha-mannosidase","type":"narrow"},{"name":"alpha-D-mannopyranosidase activity","type":"related"},{"name":"alpha-D-mannosidase activity","type":"related"},{"name":"alpha-D-mannoside mannohydrolase activity","type":"related"},{"name":"exo-alpha-mannosidase activity","type":"related"},{"name":"p-nitrophenyl-alpha-mannosidase activity","type":"narrow"}],"termid":"GO:0004559","terms_by_termid":{"GO:0004559":null,"GO:0004571":null,"GO:0008496":null}}


id: GO:0099040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a ceramide molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ceramide transport","termid":"GO:0035627"},{"relation_name":"is_a","term_name":"sphingolipid translocation","termid":"GO:0099039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ceramide translocation","termid":"GO:0099040"}


id: GO:0050400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + xylitol = ADP + 2 H+ + xylitol 5-phosphate.","definition_xrefs":["EC:2.7.1.122","RHEA:20209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"xylitol kinase activity","secondary_identifiers":["KEGG_REACTION:R02136","MetaCyc:XYLITOL-KINASE-RXN"],"synonyms":[{"name":"ATP:xylitol 5-phosphotransferase activity","type":"related"},{"name":"xylitol phosphotransferase activity","type":"related"}],"termid":"GO:0050400"}


id: GO:0098725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell division in which both daughter cells are of the same type.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symmetric cell division","termid":"GO:0098725"}


id: FYPO:0006317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0000054","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis II","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0006317"}


id: FYPO:0004901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the amount of oxygen consumed by cells in a given time is higher than in wild type when the population in which the cells are found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased oxygen consumption during stationary phase","synonyms":[{"name":"increased oxygen consumption in stationary phase","type":"exact"},{"name":"increased oxygen uptake in stationary phase","type":"related"}],"termid":"FYPO:0004901"}


id: GO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046019)","synonyms":[{"name":"regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046019"}


id: FYPO:0004888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the telomere of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome","termid":"FYPO:0004996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to telomere","synonyms":[{"name":"abnormal protein localisation to chromosome, telomeric region","type":"exact"},{"name":"abnormal protein localisation to telomere","type":"exact"},{"name":"abnormal protein localization to chromosome, telomeric region","type":"exact"}],"termid":"FYPO:0004888"}


id: GO:0032685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of granulocyte macrophage colony-stimulating factor production","termid":"GO:0032645"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045424"],"synonyms":[{"name":"down regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of granulocyte macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of granulocyte macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of GM-CSF production","type":"exact"},{"name":"negative regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"negative regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032685"}


id: GO:1903119
data:
  {"annotated_genes":["SJAG_04703","SJAG_02228","SJAG_02831","SJAG_00279"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[106069,113683,87947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the location of an actin cytoskeleton.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_02228":null,"SJAG_02831":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to actin cytoskeleton","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in actin cytoskeleton","type":"exact"},{"name":"protein localisation to actin cytoskeleton","type":"exact"},{"name":"protein localization in actin cytoskeleton","type":"exact"}],"termid":"GO:1903119","terms_by_termid":{"GO:0044379":null,"GO:1904498":null}}


id: PBO:0065728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A","termid":"PBO:0065728"}


id: GO:0030150
data:
  {"annotated_genes":["SJAG_04336","SJAG_03358","SJAG_01615","SJAG_01879","SJAG_02917","SJAG_01120","SJAG_03560","SJAG_00564","SJAG_02077","SJAG_01597","SJAG_05259","SJAG_03502","SJAG_04014","SJAG_04218","SJAG_04996","SJAG_03415","SJAG_01442","SJAG_03515","SJAG_00373","SJAG_01684","SJAG_04432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84082,85242,86561,90107,92429,94745,94923,95023,95792,98116,98690,100553,101538,102853,102916,102939,105168,107042,110388,111906,112344],"is_not":false,"summary":null,"term":"GO:0030150"}]},"cv_name":"biological_process","definition":"The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00564":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"protein import into mitochondrial matrix","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial matrix protein import","type":"exact"},{"name":"mitochondrial translocation","type":"broad"},{"name":"protein transport into mitochondrial matrix","type":"exact"}],"termid":"GO:0030150","terms_by_termid":{"GO:0030150":null}}


id: GO:0050848
data:
  {"annotated_genes":["SJAG_01181","SJAG_04551","SJAG_03799","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96462,111273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[97586,106237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process in which a cell uses calcium ions to convert an extracellular signal into a response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01181":null,"SJAG_02858":null,"SJAG_03799":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050848","terms_by_termid":{"GO:0050850":null,"GO:0106057":null}}


id: PBO:0026901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mutation_rate","termid":"PBO:0026901"}


id: PBO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug115","termid":"PBO:0016909"}


id: PBO:0071591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 8","termid":"PBO:0071591"}


id: PBO:0062891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 3","termid":"PBO:0062891"}


id: GO:0070439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptional repressor complex that contains a heterodimer of the bHLH-ZIP proteins Mad and Max, plus mSin3A, a homolog of the yeast Sin3p.","definition_xrefs":["PMID:7889570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mad-Max-mSin3A complex","termid":"GO:0070439"}


id: PBO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (CTG) 1-1","termid":"PBO:0061170"}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: PBO:0071856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 51","termid":"PBO:0071856"}


id: PBO:0062779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 1","termid":"PBO:0062779"}


id: PBO:0039717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3A","termid":"PBO:0039717"}


id: PBO:0036134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036134"}


id: PBO:0081821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 738","termid":"PBO:0081821"}


id: GO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate + H+.","definition_xrefs":["RHEA:10244","EC:3.7.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fumarylacetoacetase activity","secondary_identifiers":["KEGG_REACTION:R01364","Reactome:R-HSA-71181","UM-BBD_reactionID:r0107","MetaCyc:FUMARYLACETOACETASE-RXN"],"synonyms":[{"name":"4-fumarylacetoacetate fumarylhydrolase activity","type":"related"},{"name":"beta-diketonase activity","type":"related"},{"name":"fumarylacetoacetate hydrolase activity","type":"related"}],"termid":"GO:0004334"}


id: PBO:0001814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Pdr1","termid":"PBO:0001814"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: CHEBI:29016
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine","termid":"CHEBI:29016"}


id: PBO:0061935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 8","termid":"PBO:0061935"}


id: GO:0004686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [elongation factor 2] = ADP + [elongation factor 2] phosphate.","definition_xrefs":["EC:2.7.11.20","MetaCyc:2.7.11.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calmodulin-dependent protein kinase activity","termid":"GO:0004683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0016301","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"elongation factor-2 kinase activity","secondary_identifiers":["RHEA:21436"],"synonyms":[{"name":"ATP:elongation factor 2 phosphotransferase activity","type":"related"},{"name":"Ca/CaM-kinase III activity","type":"related"},{"name":"CaM kinase III activity","type":"related"},{"name":"EF2K","type":"related"},{"name":"STK19","type":"related"},{"name":"calmodulin-dependent protein kinase III activity","type":"related"},{"name":"eEF-2 kinase activity","type":"exact"},{"name":"eEF2 kinase activity","type":"related"},{"name":"eEF2K","type":"related"},{"name":"elongation factor 2 kinase activity","type":"related"},{"name":"eukaryotic elongation factor 2 kinase activity","type":"related"}],"termid":"GO:0004686"}


id: GO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"arginine binding","synonyms":[{"name":"Arg binding","type":"exact"},{"name":"aminopentanoic acid binding","type":"related"}],"termid":"GO:0034618"}


id: PBO:0072525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 54","termid":"PBO:0072525"}


id: GO:0045784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the concentration of calcium in the ER.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium in ER (obsolete GO:0045784)","synonyms":[{"name":"positive regulation of calcium in ER","type":"exact"}],"termid":"GO:0045784"}


id: GO:0070476
data:
  {"annotated_genes":["SJAG_04890","SJAG_02281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74820,78562],"is_not":false,"summary":null,"term":"GO:0070476"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"is_a","term_name":"rRNA base methylation","termid":"GO:0070475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02281":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"rRNA (guanine-N7)-methylation","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0070476","terms_by_termid":{"GO:0070476":null}}


id: PBO:0042284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1d molecule","termid":"PBO:0042284"}


id: PBO:0044591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 2","termid":"PBO:0044591"}


id: GO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity that contributes to the shape of a cell.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity","termid":"GO:0061172"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061160"}


id: PBO:0004257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc9","termid":"PBO:0004257"}


id: PBO:0081172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 9 pseudogene 2","termid":"PBO:0081172"}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: GO:1901582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric RNA transcription from RNA pol II promoter.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric RNA transcription from RNA pol II promoter (obsolete GO:1901582)","synonyms":[{"name":"activation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"activation of telomeric RNA transcription from RNA pol II promoter","type":"narrow"},{"name":"positive regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"up-regulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from Pol II promoter","type":"exact"},{"name":"upregulation of telomeric RNA transcription from RNA pol II promoter","type":"exact"}],"termid":"GO:1901582"}


id: PR:000050513
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-412 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"Spom-rec8/Phos:3","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S412)","type":"exact"}],"termid":"PR:000050513"}


id: GO:0106295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvins, di- or trihydroxy fatty acids derived from omega-3 polyunsaturated fatty acids, specifically icosapentaenoic acid, docosahexaenoic acid and docosapentaenoic acid.","definition_xrefs":["PMID:24899309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"resolvin biosynthetic process","termid":"GO:0106295"}


id: GO:0003245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth of cardiac muscle tissue that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"},{"relation_name":"part_of","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}


id: PBO:0074813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 14E","termid":"PBO:0074813"}


id: PBO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase subunit Naa50 (predicted)","termid":"PBO:0005587"}


id: GO:1902836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline import into cell.","definition_xrefs":["PMID:24344203","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"is_a","term_name":"regulation of proline import across plasma membrane","termid":"GO:1902834"},{"relation_name":"positively_regulates","term_name":"proline import across plasma membrane","termid":"GO:1905647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of proline import across plasma membrane","synonyms":[{"name":"activation of proline import into cell","type":"narrow"},{"name":"positive regulation of proline import into cell","type":"exact"},{"name":"up regulation of proline import into cell","type":"exact"},{"name":"up-regulation of proline import into cell","type":"exact"},{"name":"upregulation of proline import into cell","type":"exact"}],"termid":"GO:1902836"}


id: GO:0071136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha7-beta1 integrin complex bound to laminin alpha-2.","definition_xrefs":["PMID:17598176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alpha7-beta1 integrin-laminin alpha-2 complex","synonyms":[{"name":"ITGA7-ITGB1-LAMA2 complex","type":"narrow"}],"termid":"GO:0071136"}


id: GO:0046241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of m-xylene, 1,3-dimethylbenzene, a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete m-xylene biosynthetic process (obsolete GO:0046241)","synonyms":[{"name":"m-xylene anabolism","type":"exact"},{"name":"m-xylene biosynthesis","type":"exact"},{"name":"m-xylene biosynthetic process","type":"exact"},{"name":"m-xylene formation","type":"exact"},{"name":"m-xylene synthesis","type":"exact"},{"name":"meta-xylene biosynthesis","type":"exact"},{"name":"meta-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046241"}


id: PBO:0088646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase complex core protein Qcr2","termid":"PBO:0088646"}


id: PBO:0081967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 1","termid":"PBO:0081967"}


id: GO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of DNA transposition.","definition_xrefs":["GOC:krc","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transposition, DNA-mediated (obsolete GO:0000335)","synonyms":[{"name":"down regulation of DNA transposition","type":"exact"},{"name":"down-regulation of DNA transposition","type":"exact"},{"name":"downregulation of DNA transposition","type":"exact"},{"name":"inhibition of DNA transposition","type":"narrow"},{"name":"negative regulation of DNA transposition","type":"exact"}],"termid":"GO:0000335"}


id: GO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane of a vacuole that retains the same shape regardless of cell cycle phase. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575"],"is_obsolete":false,"name":"plant-type vacuole lumen","synonyms":[{"name":"lumen of vacuole with cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000330"}


id: PATO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001135 ig d concentration (obsolete PATO:0001135)","termid":"PATO:0001135"}


id: PBO:0027658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0027658"}


id: GO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process that negatively regulates protein kinase activity.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein kinase activity by protein phosphorylation (obsolete GO:0100002)","termid":"GO:0100002"}


id: GO:0016254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"part_of","term_name":"GPI anchor biosynthetic process","termid":"GO:0006506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0042158"],"is_obsolete":false,"name":"preassembly of GPI anchor in ER membrane","synonyms":[{"name":"preassembly of GPI anchor in endoplasmic reticulum membrane","type":"exact"}],"termid":"GO:0016254"}


id: PBO:0062743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 2 pseudogene","termid":"PBO:0062743"}


id: PBO:0065697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio RNA binding family member 2","termid":"PBO:0065697"}


id: PBO:0108985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 9","termid":"PBO:0108985"}


id: PBO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 3","termid":"PBO:0060734"}


id: PBO:0072514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 43","termid":"PBO:0072514"}


id: GO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an odorant and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity in response to detection of smell.","definition_xrefs":["GOC:sart","PMID:21041441","PMID:19135896","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"olfactory receptor activity","synonyms":[{"name":"odorant receptor activity","type":"exact"}],"termid":"GO:0004984"}


id: PBO:0082142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of G1-specific transcription factors MBF and SBF; involved in regulation of the timing of G1-specific gene transcription and cell cycle initiation; localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; MSA1 has a paralog, MSA2, that arose from the whole genome duplication","termid":"PBO:0082142"}


id: PBO:0056890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MID1 interacting protein 1","termid":"PBO:0056890"}


id: GO:0072738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to diamide","termid":"GO:0072737"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diamide","synonyms":[{"name":"cellular response to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"GO:0072738"}


id: PBO:0039217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C8","termid":"PBO:0039217"}


id: PBO:0064054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 88","termid":"PBO:0064054"}


id: PBO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9","termid":"PBO:0044063"}


id: PBO:0080028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 14, pseudogene","termid":"PBO:0080028"}


id: PBO:0005580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hir protein binding region","termid":"PBO:0005580"}


id: PBO:0051656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 11","termid":"PBO:0051656"}


id: GO:0019580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactarate, an anion of galactaric acid, the meso-aldaric acid derived from both D- and L-galactose.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactarate metabolic process","secondary_identifiers":["GO:0046393"],"synonyms":[{"name":"D-galactarate metabolic process","type":"related"},{"name":"D-galactarate metabolism","type":"related"},{"name":"galactarate metabolism","type":"exact"},{"name":"mucic acid metabolic process","type":"exact"},{"name":"mucic acid metabolism","type":"exact"}],"termid":"GO:0019580"}


id: GO:0004018
data:
  {"annotated_genes":["SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76071],"is_not":false,"summary":null,"term":"GO:0004018"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP.","definition_xrefs":["EC:4.3.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R01083","MetaCyc:AMPSYN-RXN","RHEA:16853"],"synonyms":[{"name":"6-N-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"N6-(1,2-dicarboxyethyl)AMP AMP-lyase activity","type":"related"},{"name":"adenylosuccinase activity","type":"broad"},{"name":"adenylosuccinate lyase activity","type":"broad"},{"name":"succino AMP-lyase activity","type":"broad"}],"termid":"GO:0004018","terms_by_termid":{"GO:0004018":null}}


id: PBO:0043418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine dipeptidase 1","termid":"PBO:0043418"}


id: FYPO:0000590
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114345,114348],"is_not":false,"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null},"genotype_count":2,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal sporulation","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta"],"synonyms":[{"name":"normal ascospore formation","type":"exact"},{"name":"sporulation: normal","type":"related"}],"termid":"FYPO:0000590","terms_by_termid":{"FYPO:0000590":null}}


id: PBO:0063250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 1","termid":"PBO:0063250"}


id: PBO:0080948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 3","termid":"PBO:0080948"}


id: PBO:0091525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation and termination factor eIF5A","termid":"PBO:0091525"}


id: GO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in T cells.","definition_xrefs":["PMID:16551263","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell tolerance induction","synonyms":[{"name":"T lymphocyte tolerance induction","type":"exact"},{"name":"T-cell tolerance induction","type":"exact"},{"name":"T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002517"}


id: PBO:0077327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63C","termid":"PBO:0077327"}


id: PBO:0080059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 29","termid":"PBO:0080059"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: PBO:0028843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly","termid":"PBO:0028843"}


id: PBO:0048837
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein nucleolar 3 like","termid":"PBO:0048837"}


id: GO:1904732
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of electron transfer activity.","definition_xrefs":["PMID:25416781","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of electron transfer activity","synonyms":[{"name":"regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"regulation of amicyanin","type":"narrow"},{"name":"regulation of azurin","type":"narrow"},{"name":"regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"regulation of copper electron carrier","type":"narrow"},{"name":"regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of electron acceptor activity","type":"narrow"},{"name":"regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"regulation of electron donor activity","type":"narrow"},{"name":"regulation of electron transfer flavoprotein","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"regulation of electron transporter activity","type":"exact"},{"name":"regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"regulation of polyferredoxin","type":"narrow"},{"name":"regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"regulation of rubredoxin","type":"narrow"},{"name":"regulation of small blue copper electron carrier","type":"narrow"},{"name":"regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904732"}


id: FYPO:0006437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal mitotic DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0006437"}


id: PBO:0042377
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: GO:0097506
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  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"}]},"cv_name":"molecular_function","definition":"DNA N-glycosylase activity acting on deaminated bases.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0140097","GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"deaminated base DNA N-glycosylase activity","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"DNA glycosylase activity acting on deaminated bases","type":"exact"},{"name":"deaminated base DNA glycosylase activity","type":"exact"}],"termid":"GO:0097506","terms_by_termid":{"GO:0004844":null}}


id: GO:0008626
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals induced by granzymes which triggers the apoptotic death of a cell. The pathway starts with reception of a granzyme signal, and ends when the execution phase of apoptosis is triggered. Granzymes are serine proteases that are secreted by cytotoxic T cells and natural killer cells to induce apoptosis in target cells.","definition_xrefs":["GOC:mtg_apoptosis","PMID:17158907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"},{"relation_name":"is_a","term_name":"granzyme-mediated programmed cell death signaling pathway","termid":"GO:0140507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granzyme-mediated apoptotic signaling pathway","synonyms":[{"name":"apoptotic signaling pathway in response to granzyme","type":"related"},{"name":"induction of apoptosis by granzyme","type":"related"}],"termid":"GO:0008626"}


id: FYPO:0006835
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan endo-1,3-beta-glucanase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glucan endo-1,3-beta-glucanase activity","synonyms":[{"name":"normal glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group","type":"exact"}],"termid":"FYPO:0006835"}


id: PBO:0046816
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase","termid":"PBO:0046816"}


id: PBO:0077644
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 1","termid":"PBO:0077644"}


id: GO:0043022
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id: PATO:0000771
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A preference quality in a bearer by virtue of the bearer's disliking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preference","termid":"PATO:0000773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aversion","termid":"PATO:0000771"}


id: PBO:0041844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAS1 domain containing 1","termid":"PBO:0041844"}


id: PBO:0109010
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 Y-linked pseudogene","termid":"PBO:0109010"}


id: GO:1902708
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a plumbagin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23028742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to plumbagin","termid":"GO:1902708"}


id: PBO:0058158
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4453","termid":"PBO:0058158"}


id: GO:0072524
data:
  {"annotated_genes":["SJAG_03298","SJAG_03828","SJAG_04693","SJAG_01543","SJAG_02154","SJAG_00461","SJAG_01012","SJAG_01539","SJAG_02618","SJAG_00957","SJAG_05230","SJAG_01425","SJAG_03373","SJAG_00707","SJAG_02107","SJAG_04152","SJAG_01310","SJAG_02945","SJAG_00027","SJAG_00501","SJAG_03091","SJAG_03786","SJAG_04334","SJAG_02191","SJAG_00685","SJAG_02297","SJAG_00283","SJAG_01881","SJAG_04263","SJAG_01359","SJAG_00070","SJAG_03903","SJAG_06622","SJAG_00409","SJAG_02796","SJAG_03669","SJAG_00605","SJAG_00839","SJAG_05314","SJAG_02853","SJAG_03934","SJAG_01824","SJAG_01566","SJAG_02148","SJAG_03660","SJAG_02009","SJAG_03096","SJAG_02696","SJAG_01582","SJAG_00633","SJAG_02889","SJAG_02462","SJAG_04192","SJAG_01383","SJAG_04362","SJAG_02369","SJAG_00252","SJAG_06621","SJAG_01500","SJAG_04048","SJAG_03852","SJAG_00691","SJAG_02135","SJAG_03946","SJAG_04467","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[104694,104696,104695,99052,101187,104693,111494,93523,101188,98791,100822,104697,76791,100823,100821,104699,90584,90114,93788,104698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[84345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[93708,106824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[108305,86729,71081,86329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[74156,76450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[72228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[93002,87552,92005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[78502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[72230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[74270,108074,78617,92269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[76860,71219,78425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[72231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[96336,97536,95256,97535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[75425,72760],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[96079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[85023,112704,98840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[108306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[84744,86330,104916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[70217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[74055,72862,103753,73467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[90119,72687,78814,77800,72118,93709,74169],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[85395],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[76911,74626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[109580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[74716,83489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[74714,83491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[77294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[75428],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[96342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[94533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The 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id: GO:1900236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Kit signaling pathway.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of Kit signaling pathway","termid":"GO:1900234"},{"relation_name":"positively_regulates","term_name":"Kit signaling pathway","termid":"GO:0038109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Kit signaling pathway","synonyms":[{"name":"activation of Kit signaling pathway","type":"narrow"},{"name":"activation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"activation of stem cell factor signaling pathway","type":"exact"},{"name":"positive regulation of Kit signalling pathway","type":"exact"},{"name":"positive regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"positive regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up regulation of Kit signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up regulation of stem cell factor signaling pathway","type":"exact"},{"name":"up-regulation of Kit signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of stem cell factor signaling pathway","type":"exact"},{"name":"upregulation of Kit signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor receptor signaling pathway","type":"exact"},{"name":"upregulation of stem cell factor signaling pathway","type":"exact"}],"termid":"GO:1900236"}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: GO:0052883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = NH4 + trans-4-coumarate.","definition_xrefs":["RHEA:24906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tyrosine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.25","EC:4.3.1.23"],"synonyms":[{"name":"L-tyrosine ammonia-lyase activity","type":"related"},{"name":"TAL activity","type":"broad"},{"name":"tyrase activity","type":"broad"}],"termid":"GO:0052883"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12415:SF0","PRO:DNx","OMA:SCHPO04352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: PBO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRA10A associated CGG repeat 1","termid":"PBO:0047916"}


id: FYPO:0001711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is stabilized, i.e. interactions between the iron-sulfur cluster and the gene product do not last as long as in wild type under any given set of conditions. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal iron-sulfur cluster binding","termid":"FYPO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"destabilized iron-sulfur cluster binding","synonyms":[{"name":"decreased duration of iron-sulfur cluster binding","type":"exact"},{"name":"destabilised iron-sulfur cluster binding","type":"exact"},{"name":"destabilized iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001711"}


id: PBO:0028977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_nitrite","termid":"PBO:0028977"}


id: GO:1900909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"negatively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of olefin metabolic process","synonyms":[{"name":"down regulation of olefin metabolic process","type":"exact"},{"name":"down regulation of olefin metabolism","type":"related"},{"name":"down-regulation of olefin metabolic process","type":"exact"},{"name":"down-regulation of olefin metabolism","type":"related"},{"name":"downregulation of olefin metabolic process","type":"exact"},{"name":"downregulation of olefin metabolism","type":"related"},{"name":"inhibition of olefin metabolic process","type":"narrow"},{"name":"inhibition of olefin metabolism","type":"related"},{"name":"negative regulation of olefin metabolism","type":"related"}],"termid":"GO:1900909"}


id: PBO:0056508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-binding lectin family member 3, pseudogene","termid":"PBO:0056508"}


id: PBO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kappa","termid":"PBO:0044009"}


id: PR:Q10163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein-associated protein B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.08","synonyms":[{"name":"Sm protein B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-smb1","type":"exact"},{"name":"snRNP-B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10163"}


id: GO:0048017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses an inositol-containing lipid to convert a signal into a response. Inositol lipids include the phosphoinositides (phosphatidylinositol and its phosphorylated derivatives), ceramides containing inositol, and inositol glycolipids.","definition_xrefs":["GOC:ceb","GOC:bf","PMID:16088939"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol lipid-mediated signaling (obsolete GO:0048017)","synonyms":[{"name":"inositol lipid-mediated signal transduction","type":"exact"},{"name":"inositol lipid-mediated signalling","type":"exact"},{"name":"inositol phospholipid-mediated signaling","type":"narrow"}],"termid":"GO:0048017"}


id: PBO:0069266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 522, pseudogene","termid":"PBO:0069266"}


id: PBO:0044820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109C","termid":"PBO:0044820"}


id: PBO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level","termid":"PBO:0030539"}


id: GO:0010658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a striated muscle cell and result in its death. Striated muscle cells make up striated muscle fibers which are divided by transverse bands into striations.","definition_xrefs":["GOC:dph","CL:0000737","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell apoptotic process","synonyms":[{"name":"striated muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010658"}


id: PBO:0002630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK inhibitor Srw1","termid":"PBO:0002630"}


id: PBO:0067263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 337, pseudogene","termid":"PBO:0067263"}


id: SO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation that increases or decreases the copy number of a given region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Copy_number_variation"],"synonyms":[{"name":"CNP","type":"exact"},{"name":"CNV","type":"exact"},{"name":"copy number polymorphism","type":"exact"},{"name":"copy number variation","type":"exact"}],"termid":"SO:0001019"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: GO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any collagen trimer that passes through a lipid bilayer membrane.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"transmembrane collagen trimer","synonyms":[{"name":"MACIT","type":"exact"}],"termid":"GO:0030936"}


id: GO:1905736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-proline import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:24344203","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proline import across plasma membrane","termid":"GO:1902835"},{"relation_name":"is_a","term_name":"regulation of L-proline import across plasma membrane","termid":"GO:1905735"},{"relation_name":"negatively_regulates","term_name":"L-proline import across plasma membrane","termid":"GO:1904271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-proline import across plasma membrane","termid":"GO:1905736"}


id: GO:0061806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination within centromeric DNA.","definition_xrefs":["PMID:27697832","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombination at centromere","synonyms":[{"name":"regulation of centromeric recombination","type":"exact"}],"termid":"GO:0061806"}


id: PATO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality of being covered with short hairs or soft down.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubescent hair","termid":"PATO:0001320"}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: GO:0086047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Purkinje myocyte membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during Purkinje myocyte cell action potential","termid":"GO:0086047"}


id: PBO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 28","termid":"PBO:0043160"}


id: GO:0032537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that are associated with finding a host organism; may include behavioral responses to light, temperature, or chemical emanations from the prospective host.","definition_xrefs":["PMID:11931033","GOC:mah","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-seeking behavior","synonyms":[{"name":"host-seeking behaviour","type":"exact"}],"termid":"GO:0032537"}


id: GO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-4 = S-adenosyl-L-homocysteine + precorrin 5.","definition_xrefs":["EC:2.1.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"precorrin-4 C11-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.133-RXN","RHEA:22012"],"synonyms":[{"name":"CobM","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-4 C11 methyltransferase activity","type":"related"}],"termid":"GO:0046026"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: PR:O94478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug137 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 137 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.11","synonyms":[{"name":"Spom972h-mug137","type":"exact"}],"termid":"PR:O94478"}


id: GO:0010398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues substituted on C-3 with beta-D-xylopyranose residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xylogalacturonan metabolic process","synonyms":[{"name":"xylogalacturonan metabolism","type":"exact"}],"termid":"GO:0010398"}


