# terms

id: GO:0071421
data:
  {"annotated_genes":["SJAG_04096","SJAG_03850","SJAG_01007","SJAG_04867"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70830,90892,99209,103983],"is_not":false,"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"A process in which a manganese ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transport","termid":"GO:0006828"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"manganese ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"manganese ion membrane transport","type":"exact"},{"name":"transmembrane manganese transport","type":"exact"}],"termid":"GO:0071421","terms_by_termid":{"GO:0071421":null}}


id: PBO:0072267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 5","termid":"PBO:0072267"}


id: PBO:0087223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold-type E3 ligase; required for cullin neddylation and ubiquitin ligase activation; contains a ubiquitin-binding domain (UBA) for ubiquitin and Nedd8 (Rub1p) interaction and a PONY domain involved in cullin binding and neddylation","termid":"PBO:0087223"}


id: GO:0160047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + muramyl dipeptide = ADP + H(+) + 6-O-phospho-muramyl dipeptide.","definition_xrefs":["PMID:36002575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"muramyl dipeptide kinase activity","secondary_identifiers":["RHEA:75935"],"termid":"GO:0160047"}


id: PBO:0056670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 8","termid":"PBO:0056670"}


id: PBO:0062162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 3 (gene/pseudogene)","termid":"PBO:0062162"}


id: PBO:0062102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily B member 2 pseudogene","termid":"PBO:0062102"}


id: GO:0010227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of floral organs.","definition_xrefs":["PO:0025395","PMID:12972671","GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ abscission","termid":"GO:0010227"}


id: GO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont carbohydrate (obsolete GO:0052406)","termid":"GO:0052406"}


id: PBO:0016520
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAK1","termid":"PBO:0016520"}


id: PBO:0083229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps YBR223C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083229"}


id: PBO:0029260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_leucine_import","termid":"PBO:0029260"}


id: MOD:01531
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01531"}


id: PBO:0082095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; catalyzes the second step of the pentose phosphate pathway; weak multicopy suppressor of los1-1 mutation; homologous to Sol2p and Sol1p; SOL3 has a paralog, SOL4, that arose from the whole genome duplication","termid":"PBO:0082095"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: GO:0007219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to the receptor Notch on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Notch signaling pathway","secondary_identifiers":["GO:0030179","Wikipedia:Notch_signaling_pathway"],"synonyms":[{"name":"N signaling pathway","type":"exact"},{"name":"N signalling pathway","type":"exact"},{"name":"Notch receptor signaling pathway","type":"exact"},{"name":"Notch receptor signalling pathway","type":"exact"},{"name":"Notch signalling pathway","type":"exact"},{"name":"Notch-receptor signaling pathway","type":"exact"},{"name":"Notch-receptor signalling pathway","type":"exact"}],"termid":"GO:0007219"}


id: GO:0035800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a deubiquitinase.","definition_xrefs":["GOC:sart","ISBN:0120793709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"deubiquitinase activator activity","termid":"GO:0035800"}


id: PBO:0057187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 345","termid":"PBO:0057187"}


id: PBO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit 3","termid":"PBO:0005633"}


id: PR:Q9HDX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mca1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDX1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB1A11.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A11.04c","synonyms":[{"name":"Spom972h-mca1","type":"exact"}],"termid":"PR:Q9HDX1"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: FYPO:0001558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of methionine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased methionine import","synonyms":[{"name":"reduced methionine import","type":"exact"},{"name":"reduced methionine uptake","type":"exact"},{"name":"decreased L-methionine import","type":"exact"},{"name":"decreased L-methionine import across plasma membrane","type":"exact"},{"name":"decreased methionine import into cell","type":"exact"},{"name":"decreased methionine transport into cell","type":"exact"},{"name":"decreased methionine uptake","type":"exact"}],"termid":"FYPO:0001558"}


id: GO:0018603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrobenzene + NADH + O2 = NAD+ + nitrite + catechol.","definition_xrefs":["UM-BBD_reactionID:r0306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitrobenzene 1,2-dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0018603"}


id: GO:1902356
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"}]},"cv_name":"biological_process","definition":"The directed movement of oxaloacetate(2-) across a membrane.","definition_xrefs":["PMID:18682385","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxaloacetate transport","termid":"GO:0015729"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"oxaloacetate(2-) transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902356","terms_by_termid":{"GO:1990555":null}}


id: GO:0034480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phosphocholine + H2O = a 1,2-diacyl-sn-glycerol + H+ + phosphocholine.","definition_xrefs":["GOC:mah","RHEA:10604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine phospholipase C activity","secondary_identifiers":["EC:3.1.4.3","MetaCyc:PHOSPHOLIPASE-C-RXN","Reactome:R-HSA-9680388"],"synonyms":[{"name":"Clostridium oedematiens beta- and gamma-toxins activity","type":"narrow"},{"name":"Clostridium welchii alpha-toxin activity","type":"narrow"},{"name":"heat-labile hemolysin","type":"narrow"},{"name":"lipophosphodiesterase I activity","type":"related"},{"name":"phosphatidylcholine cholinephosphohydrolase activity","type":"related"},{"name":"phospholipase C, acting on phosphatidylcholine","type":"exact"}],"termid":"GO:0034480"}


id: PBO:0058900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12118","termid":"PBO:0058900"}


id: MOD:00050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-acetyl-L-alanine.","definition_xrefs":["PubMed:4700463","RESID:AA0041","PubMed:363452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetyl-L-alanine","synonyms":[{"name":"(2S)-2-(acetamido)propanoic acid","type":"exact"},{"name":"2-(acetylamino)propanoic acid","type":"exact"},{"name":"2-(acetylazanyl)propanoic acid","type":"exact"},{"name":"AcAla","type":"exact"},{"name":"MOD_RES N-acetylalanine","type":"exact"},{"name":"N-acetyl-L-alanine","type":"exact"},{"name":"N-acetylated L-alanine","type":"exact"},{"name":"acetylalanine","type":"exact"}],"termid":"MOD:00050"}


id: GO:0001731
data:
  {"annotated_genes":["SJAG_05003","SJAG_00466","SJAG_02263","SJAG_04093","SJAG_01487","SJAG_00912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73235,77280,91645,92133,100784,113126],"is_not":false,"summary":null,"term":"GO:0001731"}]},"cv_name":"biological_process","definition":"The joining of the small ribosomal subunit, ternary complex, and mRNA.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00466":null,"SJAG_00912":null,"SJAG_01487":null,"SJAG_02263":null,"SJAG_04093":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"formation of translation preinitiation complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"formation of translation pre-initiation complex","type":"exact"},{"name":"translation preinitiation complex assembly","type":"exact"}],"termid":"GO:0001731","terms_by_termid":{"GO:0001731":null}}


id: PBO:0084612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YMR268W-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YMR269W","termid":"PBO:0084612"}


id: GO:2000993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of galactomannan catabolic process","termid":"GO:2000991"},{"relation_name":"positively_regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of galactomannan catabolic process","termid":"GO:2000993"}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: PBO:0085453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible shared subunit of Cop9 signalosome (CSN) and eIF3; binds eIF3b subunit Prt1p, has possible dual functions in transcriptional and translational control, contains a PCI (Proteasome-COP9 signalosome (CSN)-eIF3) domain","termid":"PBO:0085453"}


id: PBO:0057338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 524","termid":"PBO:0057338"}


id: PBO:0079051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (CAC) 7-1","termid":"PBO:0079051"}


id: GO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase catabolic process","termid":"GO:0006208"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"thymine catabolic process","synonyms":[{"name":"thymine breakdown","type":"exact"},{"name":"thymine catabolism","type":"exact"},{"name":"thymine degradation","type":"exact"}],"termid":"GO:0006210"}


id: PBO:0057311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517b","termid":"PBO:0057311"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: GO:0051510
data:
  {"annotated_genes":["SJAG_03581","SJAG_02169","SJAG_00244","SJAG_00514","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91409,90167,85561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[86401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[110217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unidimensional cell growth, the process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell elongation","type":"narrow"}],"termid":"GO:0051510","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: FYPO:0000684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on glycerol carbon source","synonyms":[{"name":"decreased growth on glycerol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on glycerol carbon source","type":"exact"},{"name":"reduced cell growth on glycerol carbon source","type":"exact"},{"name":"slow cell growth on glycerol carbon source","type":"narrow"}],"termid":"FYPO:0000684"}


id: PBO:0057589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892b","termid":"PBO:0057589"}


id: SO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat transposons in the PIF/Harbinger/tourist superfamily create 3-bp target site duplication that are mainly 'TAA' or 'TTA'. The autonomous PIF-Harbinger elements are relatively small in size, usually a few kb in length. Non-autonomous elements in this superfamily usually shorter than 600 bp are referrred to as Tourist elements. The terminal sequences for PIF/Harbinger/Tourist elements are 'GGG/CCC…GGC/GCC' or 'GA/GGCA…TGCC/TC'.","definition_xrefs":["PMID:26709091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF_Harbinger_TIR_transposon","synonyms":[{"name":"DTH transposon","type":"exact"},{"name":"Harbinger transposon","type":"exact"},{"name":"PIF Harbinger TIR transposon","type":"exact"},{"name":"PIF transposon","type":"exact"},{"name":"Tourist transposon element","type":"exact"}],"termid":"SO:0002284"}


id: PBO:0042401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 7","termid":"PBO:0042401"}


id: PBO:0042921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein hormones, alpha polypeptide","termid":"PBO:0042921"}


id: PBO:0068639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 20, pseudogene","termid":"PBO:0068639"}


id: GO:0030787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-4-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:23248","EC:2.1.1.129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"inositol 4-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.129-RXN","KEGG_REACTION:R01190"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 4-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 4-O-methyltransferase activity","type":"related"},{"name":"myo-inositol 6-O-methyltransferase activity","type":"related"}],"termid":"GO:0030787"}


id: FYPO:0009091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and proline as  nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on lysine and proline nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and proline nitrogen source","type":"exact"}],"termid":"FYPO:0009091"}


id: GO:0042278
data:
  {"annotated_genes":["SJAG_00885","SJAG_03096","SJAG_00957","SJAG_01359","SJAG_06634","SJAG_02580","SJAG_04927","SJAG_00134","SJAG_01859","SJAG_02959","SJAG_00044","SJAG_01070","SJAG_02582","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102608],"is_not":false,"summary":null,"term":"GO:0042278"},{"annotations":[84604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83347,83348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[86225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[111962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[74659,86730,107413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[89358,89144,85474,73211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01070":null,"SJAG_01359":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04927":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"purine metabolic process","type":"broad"},{"name":"purine metabolism","type":"broad"},{"name":"purine nucleoside metabolism","type":"exact"}],"termid":"GO:0042278","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0042278":null,"GO:0046085":null,"GO:0046086":null}}


id: GO:0060816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on either the paternal or maternal X-chromosome in the XX sex.","definition_xrefs":["GOC:tb","PMID:32189388","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dosage compensation by inactivation of X chromosome","termid":"GO:0009048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"random inactivation of X chromosome","synonyms":[{"name":"rXCI","type":"related"}],"termid":"GO:0060816"}


id: PBO:0030885
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleic_acid_metabolism_phenotype_during_vegetative_growth","termid":"PBO:0030885"}


id: PBO:0086036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the cytoplasm and bud neck; mRNA expression may be regulated by the cell cycle and/or cell wall stress; overexpression of YBR071W affects endocytic protein trafficking","termid":"PBO:0086036"}


id: PBO:0071151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 16","termid":"PBO:0071151"}


id: GO:0018344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a geranylgeranyl group to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenylation","termid":"GO:0018342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein geranylgeranylation","secondary_identifiers":["GO:0018348"],"synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"narrow"},{"name":"protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:0018344"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: CHEBI:16907
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitroquinoline N-oxide","termid":"CHEBI:16907"}


id: PBO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 2","termid":"PBO:0001401"}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: PBO:0055936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 42","termid":"PBO:0055936"}


id: FYPO:0005563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer and thicker than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thick stable microtubule bundle","termid":"FYPO:0005559"},{"relation_name":"is_a","term_name":"long stable microtubule bundle","termid":"FYPO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"long, thick stable microtubule bundle","synonyms":[{"name":"elongated, thick stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length and thickness","type":"exact"},{"name":"long, thick Q-MT bundles","type":"exact"},{"name":"long, thick quiescent cell MT bundle","type":"exact"},{"name":"long, thick quiescent cell microtubule bundle","type":"exact"},{"name":"long, thick stable microtubule array","type":"related"},{"name":"long, thick static microtubule bundle","type":"exact"}],"termid":"FYPO:0005563"}


id: GO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["GOC:elh","PMID:16873066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-M complex","termid":"GO:0000838"}


id: GO:0009667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the inner membrane of a plastid.","definition_xrefs":["GOC:jl","GOC:ai","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane organization","termid":"GO:0009668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plastid inner membrane organization","synonyms":[{"name":"plastid inner membrane organisation","type":"exact"},{"name":"plastid inner membrane organization and biogenesis","type":"related"}],"termid":"GO:0009667"}


id: PBO:0064027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 61","termid":"PBO:0064027"}


id: PBO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 22","termid":"PBO:0075269"}


id: PBO:0081207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 7 pseudogene 1","termid":"PBO:0081207"}


id: GO:0005183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of gonadotropin hormone-releasing hormone (GnRH), any of a family of decapeptide amide hormones that are released by the hypothalamus in response to neural and/or chemical stimuli. In at least mammals, upon receptor binding, GnRH causes the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) by the anterior pituitary.","definition_xrefs":["ISBN:0198506732","Wikipedia:Gonadotropin-releasing_hormone","PMID:11026571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005515","GO:0098772","GO:0140677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"gonadotropin hormone-releasing hormone activity","synonyms":[{"name":"GnRH activity","type":"exact"},{"name":"LH/FSH-RF","type":"exact"},{"name":"LHRH activity","type":"exact"},{"name":"gonadotrophin hormone-releasing hormone activity","type":"exact"},{"name":"luteinizing hormone-releasing factor activity","type":"exact"},{"name":"luteinizing hormone-releasing hormone activity","type":"exact"},{"name":"luteinizing hormone/follicle-stimulating hormone releasing factor activity","type":"exact"}],"termid":"GO:0005183"}


id: FYPO:0005024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal along the chromosome arms. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PMID:21633354","PomBase:mah","GO:1990891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid arm separation","synonyms":[{"name":"abnormal mitotic chromosome arm separation","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid arm separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid arm separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005024"}


id: GO:0097516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A parallel bundle of actin filaments at the core of a microvillus.","definition_xrefs":["GOC:mah","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle of actin-based cell projection","termid":"GO:0098859"},{"relation_name":"part_of","term_name":"microvillus","termid":"GO:0005902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"microvillar actin bundle","termid":"GO:0097516"}


id: PBO:0077156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 5","termid":"PBO:0077156"}


id: PBO:0043647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 7A","termid":"PBO:0043647"}


id: PBO:0081956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida glycoprotein 3","termid":"PBO:0081956"}


id: FYPO:0000478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the meiotic nuclear divisions are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiosis","synonyms":[{"name":"meiosis: normal","type":"related"},{"name":"normal meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000478"}


id: GO:0009291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of unidirectional (polarized) transfer of genetic information involving direct cellular contact between a donor and recipient cell; the contact is followed by the formation of a cellular bridge that physically connects the cells. Some or all of the chromosome(s) of the donor cell is transferred into the recipient cell.","definition_xrefs":["Wikipedia:Bacterial_conjugation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidirectional conjugation","synonyms":[{"name":"bacterial conjugation","type":"related"}],"termid":"GO:0009291"}


id: PBO:0076717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 24","termid":"PBO:0076717"}


id: FYPO:0000130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0000120","FYPO:0005447"],"is_obsolete":false,"name":"short spindle","synonyms":[{"name":"decreased spindle length","type":"exact"},{"name":"short spindles","type":"exact"},{"name":"spindle defects, short spindles","type":"exact"}],"termid":"FYPO:0000130"}


id: GO:0031494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mating type switching, the conversion of a single-cell organism from one mating type to another by the precise replacement of a DNA sequence at the expressed mating type locus with a copy of a sequence from a donor locus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mating type switching","termid":"GO:0031494"}


id: PBO:0043276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 3 member A","termid":"PBO:0043276"}


id: GO:0099621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-deoxy-4-formamido-beta-L-arabinopyranose + ditrans,octacis-undecaprenyl phosphate = UDP + 4-deoxy-4-formamido-alpha-L-arabinopyranosyl ditrans,octacis-undecaprenyl phosphate.","definition_xrefs":["GOC:al","PMID:15695810","GOC:dos","PMID:11706007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase activity","secondary_identifiers":["GO:0103019","MetaCyc:RXN0-3521","EC:2.4.2.53","RHEA:27722"],"synonyms":[{"name":"Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl phosphate-L-Ara4FN transferase activity","type":"exact"},{"name":"undecaprenyl-phosphate Ara4FN transferase activity","type":"exact"}],"termid":"GO:0099621"}


id: PBO:0044098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A6","termid":"PBO:0044098"}


id: PBO:0041182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 2","termid":"PBO:0041182"}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: PATO:0001281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated purple","synonyms":[{"name":"bright purple","type":"related"}],"termid":"PATO:0001281"}


id: PBO:0069326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 584, pseudogene","termid":"PBO:0069326"}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","PMID:11606552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: PBO:0109133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 6","termid":"PBO:0109133"}


id: FYPO:0005323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-free translesion synthesis is abnormal. Error-free translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication by using a specialized DNA polymerase or replication complex to insert a defined nucleotide across from the lesion.","definition_xrefs":["GO:0070987","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA repair during vegetative growth","termid":"FYPO:0000188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal error-free translesion synthesis","synonyms":[{"name":"abnormal error-free translesion synthesis during mitotic cell cycle","type":"related"},{"name":"abnormal error-free translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005323"}


id: PBO:0081873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 815, pseudogene","termid":"PBO:0081873"}


id: PBO:0063138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin gamma","termid":"PBO:0063138"}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: PATO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased intensity","synonyms":[{"name":"low intensity","type":"exact"}],"termid":"PATO:0001783"}


id: PBO:0027465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_wall_thickness_at_old_end_during_vegetative_growth","termid":"PBO:0027465"}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["PomBase:mah","GO:0006418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: SO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan","termid":"SO:0000910"}


id: MOD:01763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01763"}


id: FYPO:0007482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is decreased during the first meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"decreased protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"decreased protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"reduced protein localization to meiotic spindle pole body during meiosis I","type":"exact"}],"termid":"FYPO:0007482"}


id: PBO:0084848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L35 and human MRPL35 ribosomal proteins","termid":"PBO:0084848"}


id: PBO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 138","termid":"PBO:0075088"}


id: PBO:0072924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 5","termid":"PBO:0072924"}


id: GO:0008871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + aminoglycoside = diphosphate + 2''-nucleotidylaminoglycoside.","definition_xrefs":["EC:2.7.7.46","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside nucleotidyltransferase activity","termid":"GO:0034068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 2''-nucleotidyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.46-RXN"],"synonyms":[{"name":"2''-aminoglycoside nucleotidyltransferase activity","type":"related"},{"name":"NTP:gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamicin 2''- adenylyltransferase activity","type":"narrow"},{"name":"gentamicin 2''-nucleotidyltransferase activity","type":"narrow"},{"name":"gentamycin 2''-nucleotidyltransferase activity","type":"narrow"}],"termid":"GO:0008871"}


id: SO:0002159
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved Cdc48/p97 interaction motif with strict consensus sequence F[PI]GKG[TK][RK]LG[GT] and relaxed consensus sequence FXGKGX[RK]LG.","definition_xrefs":["PMID:27655872","PMID:17083136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"SHP_box","synonyms":[{"name":"SHP box","type":"exact"}],"termid":"SO:0002159"}


id: PBO:0039234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 3","termid":"PBO:0039234"}


id: GO:0098627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein arginine phosphate + H2O = protein arginine + phosphate.","definition_xrefs":["RHEA:43380","PMID:23770242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674","GO:0140096","GO:0004721"],"is_obsolete":false,"name":"protein arginine phosphatase activity","secondary_identifiers":["EC:3.9.1.2"],"termid":"GO:0098627"}


id: PBO:0077627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol methyltransferase 1A pseudogene 1","termid":"PBO:0077627"}


id: GO:0044207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains aminoacylated initiator methionine tRNA, GTP, and initiation factor 2 (either eIF2 in eukaryotes, or IF2 in prokaryotes). In prokaryotes, fMet-tRNA (initiator) is used rather than Met-tRNA (initiator).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"translation initiation ternary complex","synonyms":[{"name":"Met-tRNA/eIF2.GTP ternary complex","type":"narrow"},{"name":"translation initiation (ternary) complex","type":"exact"}],"termid":"GO:0044207"}


id: GO:0019599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (R)-4-hydroxymandelate, the anion of (R)-4-hydroxymandelic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"(R)-4-hydroxymandelate metabolic process","termid":"GO:0046431"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"(R)-4-hydroxymandelate catabolic process","secondary_identifiers":["MetaCyc:4-HYDROXYMANDELATE-DEGRADATION-PWY"],"synonyms":[{"name":"(R)-4-hydroxymandelate breakdown","type":"exact"},{"name":"(R)-4-hydroxymandelate catabolism","type":"exact"},{"name":"(R)-4-hydroxymandelate degradation","type":"exact"}],"termid":"GO:0019599"}


id: GO:0070714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-uridine insertion dinucleotide.","definition_xrefs":["GOC:mah","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-uridine insertion","synonyms":[{"name":"RNA GU insertion","type":"exact"}],"termid":"GO:0070714"}


id: PBO:0073792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 12","termid":"PBO:0073792"}


id: PBO:0090678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase S6K family Sck2","termid":"PBO:0090678"}


id: GO:1990049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.","definition_xrefs":["GOC:kmv","PMID:24762653","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"dense core granule cytoskeletal transport","termid":"GO:0099519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde neuronal dense core vesicle transport","synonyms":[{"name":"retrograde dense core granule trafficking","type":"exact"},{"name":"retrograde dense core granule transport","type":"exact"}],"termid":"GO:1990049"}


id: PBO:0004824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 4","termid":"PBO:0004824"}


id: GO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progession of the posterior semicircular canal from its initial formation to the mature structure.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semicircular canal development","termid":"GO:0060872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior semicircular canal development","termid":"GO:0060874"}


id: FYPO:0007194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in increased numbers","synonyms":[{"name":"extra mitochondria during vegetative growth","type":"exact"},{"name":"increased number of mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0007194"}


id: PBO:0003644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-glucan synthase Mok12","termid":"PBO:0003644"}


id: PBO:0043146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 14","termid":"PBO:0043146"}


id: GO:0140057
data:
  {"annotated_genes":["SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89911],"is_not":false,"summary":null,"term":"GO:0140057"}]},"cv_name":"biological_process","definition":"The attachment of a mitochondrial membrane to a vacuolar membrane via molecular tethers that physically bridge their respective membranes and attach them to each other. The tethering may facilitate exchange of metabolites between the organelles.","definition_xrefs":["PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0140056","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vacuole-mitochondria membrane tethering","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140057","terms_by_termid":{"GO:0140057":null}}


id: PATO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001129 relative work value (obsolete PATO:0001129)","termid":"PATO:0001129"}


id: PBO:0045740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EBF transcription factor 3","termid":"PBO:0045740"}


id: GO:0102964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-corytuberine + S-adenosyl-L-methionine = H+ + magnoflorine + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:(S)-corytuberine-N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9315","RHEA:51524"],"termid":"GO:0102964"}


id: PBO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Spt4","termid":"PBO:0004683"}


id: PBO:0051989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP1 divergent transcript","termid":"PBO:0051989"}


id: GO:0019062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.","definition_xrefs":["GOC:bf","GOC:jl","VZ:956","UniProtKB-KW:KW-1161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion attachment to host cell","synonyms":[{"name":"viral absorption","type":"exact"},{"name":"viral attachment to host cell","type":"related"},{"name":"virion attachment to host cell surface receptor","type":"narrow"}],"termid":"GO:0019062"}


id: PBO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-19","termid":"PBO:0075056"}


id: PBO:0082503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta; involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0082503"}


id: GO:0102132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxypimeloyl-[acp] methyl ester = NADPH + H+ + a 3-oxo-pimeloyl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity (obsolete GO:0102132)","termid":"GO:0102132"}


id: GO:0032353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"negatively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hormone biosynthetic process","synonyms":[{"name":"down regulation of hormone biosynthetic process","type":"exact"},{"name":"down-regulation of hormone biosynthetic process","type":"exact"},{"name":"downregulation of hormone biosynthetic process","type":"exact"},{"name":"inhibition of hormone biosynthetic process","type":"narrow"}],"termid":"GO:0032353"}


id: PBO:0038702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 15","termid":"PBO:0038702"}


id: PBO:0078291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (GCA) 24-1","termid":"PBO:0078291"}


id: PBO:0000636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop58 (predicted)","termid":"PBO:0000636"}


id: PBO:0067418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 535, pseudogene","termid":"PBO:0067418"}


id: GO:0120250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:39023","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}


id: PBO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes only","termid":"PBO:0011071"}


id: PBO:0081295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 75D","termid":"PBO:0081295"}


id: PBO:0069400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 660, pseudogene","termid":"PBO:0069400"}


id: GO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002593"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"negative regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002599"}


id: FYPO:0007613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from STREP promoter","synonyms":[{"name":"increased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from STREP promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007613"}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: PBO:0056044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listerin E3 ubiquitin protein ligase 1","termid":"PBO:0056044"}


id: PBO:0030675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_septation_index","termid":"PBO:0030675"}


id: PR:O43084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3103 gene.","definition_xrefs":["UniProtKB:O43084","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3103 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.09","synonyms":[{"name":"Spom972h-hsp3103","type":"exact"},{"name":"glyoxalase 3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43084"}


id: PBO:0074118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 4","termid":"PBO:0074118"}


id: PBO:0027641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_during_meiosis_II","termid":"PBO:0027641"}


id: GO:0003909
data:
  {"annotated_genes":["SJAG_02527","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78785,88174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003910"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+.","definition_xrefs":["ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"DNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-5693604","Reactome:R-HSA-5651789","Reactome:R-HSA-5358592","Reactome:R-HSA-69173","Reactome:R-HSA-5651805","Reactome:R-HSA-175258","Reactome:R-HSA-5649734","Reactome:R-HSA-174456","Reactome:R-HSA-73931","Reactome:R-HSA-6782227","Reactome:R-HSA-5690997","Reactome:R-HSA-5687675"],"termid":"GO:0003909","terms_by_termid":{"GO:0003910":null}}


id: PBO:0055941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 49","termid":"PBO:0055941"}


id: PBO:0050840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly factor IBA57","termid":"PBO:0050840"}


id: PBO:0038911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor F1","termid":"PBO:0038911"}


id: PBO:0044649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 1","termid":"PBO:0044649"}


id: PBO:0059712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 20","termid":"PBO:0059712"}


id: FYPO:0002874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"premature protein localization to cell division site","termid":"FYPO:0007829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to medial cortex during vegetative growth","synonyms":[{"name":"advanced protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"faster protein localization to medial cortex during vegetative growth","type":"related"},{"name":"premature protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"premature protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"premature protein localization to medial ring during vegetative growth","type":"exact"}],"termid":"FYPO:0002874"}


id: GO:0017159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + cysteamine.","definition_xrefs":["RHEA:13445","EC:3.5.1.92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"pantetheine hydrolase activity","secondary_identifiers":["MetaCyc:3.5.1.92-RXN","Reactome:R-HSA-8938300","KEGG_REACTION:R02973"],"synonyms":[{"name":"(R)-pantetheine amidohydrolase activity","type":"related"},{"name":"pantetheinase activity","type":"related"},{"name":"vanin","type":"related"},{"name":"vanin-1","type":"related"}],"termid":"GO:0017159"}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: FYPO:0003749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of m7G(5')pppN diphosphatase activity does not occur.","definition_xrefs":["PMID:22323607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity during mitotic cell cycle","type":"related"},{"name":"abolished positive regulation of m7G(5')pppN diphosphatase activity during vegetative growth","type":"exact"},{"name":"positive regulation of m7G(5')pppN diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0003749"}


id: PBO:0027871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylated_histone_binding","termid":"PBO:0027871"}


id: GO:0046039
data:
  {"annotated_genes":["SJAG_04849","SJAG_01298","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74286,97674,95550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GTP metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"GTP metabolism","type":"exact"}],"termid":"GO:0046039","terms_by_termid":{"GO:0006183":null}}


id: GO:0070170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tooth mineralization","termid":"GO:0070170"}


id: GO:0099121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a fungal sorus over time, from its formation to the mature structure. A fungal sorus is a spore containing structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungal sorus development","termid":"GO:0099121"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: FYPO:0004085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell growth is decreased during the vegetative growth phase of the life cycle. Cell growth is the irreversible increase in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"},{"relation_name":"is_a","term_name":"decreased cell growth","termid":"FYPO:0004075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased vegetative cell growth","synonyms":[{"name":"reduced vegetative cell growth","type":"exact"}],"termid":"FYPO:0004085"}


id: FYPO:0001847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}


id: PBO:0030334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylethanolamine_level","termid":"PBO:0030334"}


id: PR:G2TRJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa3 gene.","definition_xrefs":["UniProtKB:G2TRJ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.21","synonyms":[{"name":"Spom972h-coa3","type":"exact"},{"name":"transcripts altered in meiosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ9"}


id: SO:1001251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is supported by sequence similarity data.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"},{"relation_name":"is_a","term_name":"CDS_predicted","termid":"SO:1001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_supported_by_sequence_similarity_data","synonyms":[{"name":"CDS supported by sequence similarity data","type":"exact"}],"termid":"SO:1001251"}


id: GO:0120085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transposon integration that contributes to a process of RNA-mediated transposition.","definition_xrefs":["PMID:26358720","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration involved in RNA-mediated transposition (obsolete GO:0120085)","synonyms":[{"name":"retrotransposon integration","type":"exact"}],"termid":"GO:0120085"}


id: GO:0061548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion development","synonyms":[{"name":"ganglia development","type":"related"},{"name":"gangliogenesis","type":"narrow"}],"termid":"GO:0061548"}


id: PBO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphorylceramide mannosyltransferase activity Imt1","termid":"PBO:0090437"}


id: GO:0033500
data:
  {"annotated_genes":["SJAG_01254","SJAG_01699","SJAG_04312","SJAG_04495","SJAG_04026","SJAG_00574","SJAG_03081","SJAG_00472","SJAG_02444","SJAG_04334","SJAG_01754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97292,104821,104321,102202,101267,89816,101850,110669,111694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[70515,75385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001678"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state of a carbohydrate within an organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbohydrate homeostasis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0033500","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: PBO:0034591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_vegetative_growth","termid":"PBO:0034591"}


id: FYECO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A growth condition in which cells are grown in a medium that is not refreshed over the time before cells are assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single passage culture","termid":"FYECO:0000366"}


id: GO:2000975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-B cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-B cell differentiation","termid":"GO:2000973"},{"relation_name":"positively_regulates","term_name":"pro-B cell differentiation","termid":"GO:0002328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pro-B cell differentiation","synonyms":[{"name":"positive regulation of pro-B cell development","type":"related"},{"name":"positive regulation of pro-B lymphocyte differentiation","type":"exact"}],"termid":"GO:2000975"}


id: GO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric interstitial fibroblast.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal interstitial fibroblast fate commitment","termid":"GO:0072153"},{"relation_name":"part_of","term_name":"mesonephric interstitial fibroblast differentiation","termid":"GO:0061266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric interstitial fibroblast fate commitment","termid":"GO:0061268"}


id: GO:0000101
data:
  {"annotated_genes":["SJAG_00991","SJAG_04295"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[88930],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of amino acids containing sulfur (cystine, methionine and their derivatives) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_04295":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sulfur amino acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulphur amino acid transport","type":"exact"}],"termid":"GO:0000101","terms_by_termid":{"GO:1903712":null,"GO:1905626":null}}


id: GO:0045840
data:
  {"annotated_genes":["SJAG_02380","SJAG_01297","SJAG_01805","SJAG_03126","SJAG_03353","SJAG_02169","SJAG_04968","SJAG_02451","SJAG_03048","SJAG_01679","SJAG_00883","SJAG_03681","SJAG_00666","SJAG_02336","SJAG_04259","SJAG_04573","SJAG_02498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86398,102582,107203,103582,99307,95066,111041,108988,109460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[89791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[97546,97815,106622,95612,89409,93226,109945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic nuclear division","termid":"GO:0007088"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitosis","type":"narrow"},{"name":"mitogenic activity","type":"narrow"},{"name":"positive regulation of mitosis","type":"exact"},{"name":"stimulation of mitosis","type":"narrow"},{"name":"up regulation of mitosis","type":"exact"},{"name":"up-regulation of mitosis","type":"exact"},{"name":"upregulation of mitosis","type":"exact"}],"termid":"GO:0045840","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0064682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 18","termid":"PBO:0064682"}


id: GO:0051157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"},{"relation_name":"is_a","term_name":"arabitol metabolic process","termid":"GO:0051161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"arabitol catabolic process","secondary_identifiers":["GO:0019591"],"synonyms":[{"name":"arabitol breakdown","type":"exact"},{"name":"arabitol catabolism","type":"exact"},{"name":"arabitol degradation","type":"exact"},{"name":"arabitol utilization","type":"related"}],"termid":"GO:0051157"}


id: PBO:0041793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein of muscle Z-line subunit alpha 2","termid":"PBO:0041793"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: GO:2001227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to quercitrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"quercitrin binding","termid":"GO:2001227"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: PBO:0067462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 587, pseudogene","termid":"PBO:0067462"}


id: PBO:0084164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved negative regulator of RNA polymerase III; involved in tRNA processing and stability; inhibits tRNA degradation via rapid tRNA decay (RTD) pathway; binds N-terminal domain of Rpc160p subunit of Pol III to prevent closed-complex formation; regulated by phosphorylation mediated by TORC1, protein kinase A, Sch9p, casein kinase 2; localizes to cytoplasm during vegetative growth and translocates to nucleus and nucleolus under stress conditions","termid":"PBO:0084164"}


id: PBO:0083168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps verified ORF RSC8/YFR037C","termid":"PBO:0083168"}


id: GO:0075103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of calcium or calmodulin-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont calcium or calmodulin-mediated signal transduction (obsolete GO:0075103)","synonyms":[{"name":"modulation by host of symbiont Ca++ or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075103"}


id: PBO:0041141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4","termid":"PBO:0041141"}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 34","termid":"PBO:0072505"}


id: PBO:0038430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-N-acetylglucosaminyltransferase","termid":"PBO:0038430"}


id: PBO:0012578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 7 (predicted)","termid":"PBO:0012578"}


id: PBO:0039376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomotin like 1","termid":"PBO:0039376"}


id: PBO:0075149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 5","termid":"PBO:0075149"}


id: SO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000793 engineered_DNA (obsolete SO:0000793)","termid":"SO:0000793"}


id: PBO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 24","termid":"PBO:0052383"}


id: PBO:0003264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-N (predicted)","termid":"PBO:0003264"}


id: GO:0060541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the respiratory system over time from its formation to its mature structure. The respiratory system carries out respiratory gaseous exchange.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system development","termid":"GO:0060541"}


id: PBO:0110386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3123","termid":"PBO:0110386"}


id: PBO:0068931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 174, pseudogene","termid":"PBO:0068931"}


id: PBO:0083236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion mutation phenotype is likely due to the overlapping verified ORF SKI8/YGL213C","termid":"PBO:0083236"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:23826995","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: PBO:0089873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10","termid":"PBO:0089873"}


id: PBO:0080650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDTC1 divergent transcript","termid":"PBO:0080650"}


id: GO:0014843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of satellite cell proliferation; dependent on specific growth factor activity such as fibroblast growth factors and transforming growth factor beta.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth factor dependent regulation of skeletal muscle satellite cell proliferation","termid":"GO:0014843"}


id: PBO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 2","termid":"PBO:0050401"}


id: PBO:0052529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 2","termid":"PBO:0052529"}


id: PBO:0064459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with ZNF domain","termid":"PBO:0064459"}


id: PR:Q9HDZ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC589.05c gene.","definition_xrefs":["UniProtKB:Q9HDZ9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0553 protein C589.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.05c","synonyms":[{"name":"Spom972h-SPAC589.05c","type":"exact"}],"termid":"PR:Q9HDZ9"}


id: GO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast development","termid":"GO:0048901"}


id: GO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of inhibiting an immune effector process contributing to an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc receptor mediated inhibitory signaling pathway","synonyms":[{"name":"Fc receptor mediated inhibitory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002774"}


id: GO:0015554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tartrate from one side of a membrane to the other. Tartrate is the anion of 2,3-dihydroxybutanedioic acid, one of the aldaric acids. The L(+) enantiomer occurs widely in plants, especially in grape juice, and in fungi and bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salt transmembrane transporter activity","termid":"GO:1901702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"tartrate transmembrane transporter activity","termid":"GO:0015554"}


id: PBO:0017789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly protein Cia2 (predicted)","termid":"PBO:0017789"}


id: GO:0008935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-succinylbenzoyl-CoA + H+ = 1,4-dihydroxy-2-naphthoyl-CoA + H2O.","definition_xrefs":["RHEA:26562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA synthase activity","secondary_identifiers":["MetaCyc:NAPHTHOATE-SYN-RXN","EC:4.1.3.36","KEGG_REACTION:R04150"],"synonyms":[{"name":"DHNA synthetase activity","type":"related"},{"name":"O-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) activity","type":"related"},{"name":"dihydroxynaphthoate synthase activity","type":"related"},{"name":"dihydroxynaphthoic acid synthetase activity","type":"related"},{"name":"naphthoate synthase activity","type":"related"}],"termid":"GO:0008935"}


id: GO:1901051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of atropine. Atropine is the racemic mixture of hyoscyamine.","definition_xrefs":["PMID:33572199","GOC:yaf","GOC:TermGenie","PMID:2879005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"atropine biosynthetic process","secondary_identifiers":["GO:1901049"],"synonyms":[{"name":"atropine biosynthesis","type":"exact"},{"name":"atropine formation","type":"exact"},{"name":"atropine anabolism","type":"exact"},{"name":"atropine metabolic process","type":"broad"},{"name":"atropine metabolism","type":"broad"},{"name":"atropine synthesis","type":"exact"},{"name":"hyoscyamine biosynthetic process","type":"exact"}],"termid":"GO:1901051"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: GO:0018665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetate + NADPH + H+ + O2 = homogentisate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"4-hydroxyphenylacetate 1-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0300","MetaCyc:1.14.13.18-RXN"],"synonyms":[{"name":"4-HPA 1-hydroxylase activity","type":"related"},{"name":"4-hydroxyphenyl-acetate 1-hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetate 1-hydroxylase activity","type":"related"},{"name":"4-hydroxyphenylacetate,NAD(P)H:oxygen oxidoreductase (1-hydroxylating)","type":"related"},{"name":"4-hydroxyphenylacetic 1-hydroxylase activity","type":"related"}],"termid":"GO:0018665"}


id: GO:0004332
data:
  {"annotated_genes":["SJAG_01310","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71304,72831],"is_not":false,"summary":null,"term":"GO:0004332"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde-3-phosphate.","definition_xrefs":["EC:4.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01310":null,"SJAG_03373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose-bisphosphate aldolase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-71496","MetaCyc:F16ALDOLASE-RXN","RHEA:14729","Reactome:R-HSA-71495"],"synonyms":[{"name":"1,6-diphosphofructose aldolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"SMALDO","type":"related"},{"name":"aldolase activity","type":"broad"},{"name":"diphosphofructose aldolase activity","type":"related"},{"name":"fructoaldolase activity","type":"related"},{"name":"fructose 1,6-diphosphate aldolase activity","type":"related"},{"name":"fructose 1-monophosphate aldolase activity","type":"related"},{"name":"fructose 1-phosphate aldolase activity","type":"related"},{"name":"fructose diphosphate aldolase activity","type":"related"},{"name":"fructose-1,6-bisphosphate triosephosphate-lyase activity","type":"related"},{"name":"ketose 1-phosphate aldolase activity","type":"related"},{"name":"phosphofructoaldolase activity","type":"related"},{"name":"zymohexase activity","type":"related"}],"termid":"GO:0004332","terms_by_termid":{"GO:0004332":null}}


id: GO:0034707
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which chloride ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloride channel complex","termid":"GO:0034707"}


id: PBO:0064068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 102","termid":"PBO:0064068"}


id: PBO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 73","termid":"PBO:0071232"}


id: FYPO:0001082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall polysaccharide level","termid":"FYPO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002946","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased cell wall beta-glucan level","synonyms":[{"name":"decreased cell wall beta-D-glucan level","type":"exact"},{"name":"decreased cell wall beta-glucan accumulation","type":"related"},{"name":"decreased cell wall beta-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall beta-glucan level during vegetative growth","type":"exact"},{"name":"reduced cell wall beta-glucan level","type":"exact"}],"termid":"FYPO:0001082"}


id: GO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"viral capsid","termid":"GO:0019028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral nucleocapsid","secondary_identifiers":["GO:0019014"],"synonyms":[{"name":"core","type":"broad"},{"name":"nucleocapsid","type":"exact"}],"termid":"GO:0019013"}


id: GO:0050217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyhexan-3-one = 2 propanal.","definition_xrefs":["RHEA:11100","EC:4.1.2.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"propioin synthase activity","secondary_identifiers":["KEGG_REACTION:R00038","MetaCyc:PROPIOIN-SYNTHASE-RXN"],"synonyms":[{"name":"4-hydroxy-3-hexanone aldolase activity","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase (propanal-forming)","type":"related"},{"name":"4-hydroxy-3-hexanone propanal-lyase activity","type":"related"}],"termid":"GO:0050217"}


id: FYPO:0000923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of isocitrate dehydrogenase (NAD+) activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal isocitrate dehydrogenase (NAD+) activity","termid":"FYPO:0000922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased isocitrate dehydrogenase (NAD+) activity","synonyms":[{"name":"increased NAD-IDH activity","type":"exact"}],"termid":"FYPO:0000923"}


id: GO:1990710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric mismatch repair complex involved in binding to and correcting insertion/deletion mutations.","definition_xrefs":["PMID:21666597","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MutS complex","synonyms":[{"name":"MutS mismatch repair complex","type":"exact"}],"termid":"GO:1990710"}


id: GO:0035588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by an extracellular purine or purine derivative binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:9755289","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"purinergic nucleotide receptor signaling pathway","termid":"GO:0035590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled purinergic receptor signaling pathway","synonyms":[{"name":"G-protein coupled purinergic receptor signaling pathway","type":"exact"},{"name":"G-protein coupled purinergic receptor signalling pathway","type":"exact"}],"termid":"GO:0035588"}


id: PATO:0002044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being a quadrilateral with two parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quadrangular","termid":"PATO:0001988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trapezoid","synonyms":[{"name":"trapezoidal","type":"exact"}],"termid":"PATO:0002044"}


id: PBO:0017713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GF14","termid":"PBO:0017713"}


id: GO:0140064
data:
  {"annotated_genes":["SJAG_02990","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87057,94481],"is_not":false,"summary":null,"term":"GO:0140064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + lysine in peptide = CoA + N-crotonyl-lysine-peptide.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"peptide crotonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53908"],"synonyms":[{"name":"protein crotonyltransferase activity","type":"related"}],"termid":"GO:0140064","terms_by_termid":{"GO:0140064":null}}


id: PBO:0071951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 1","termid":"PBO:0071951"}


id: PBO:0061852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 2","termid":"PBO:0061852"}


id: FYPO:0006089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptidase activity","termid":"FYPO:0000666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}


id: GO:0046473
data:
  {"annotated_genes":["SJAG_01957","SJAG_01519","SJAG_04319","SJAG_04883","SJAG_04323","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88660,71604,70965,91491,71482,105205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_01519":null,"SJAG_01957":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"phosphatidic acid metabolism","type":"exact"}],"termid":"GO:0046473","terms_by_termid":{"GO:0006654":null}}


id: PR:O94460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A queuine tRNA-ribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00369","PRO:DNx","PANTHER:PTHR11962:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.19c","secondary_identifiers":["UniProtKB:O94460"],"synonyms":[{"name":"Spom972h-QTRT1","type":"exact"},{"name":"guanine insertion enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-guanine transglycosylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94460"}


id: PBO:0044198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin G","termid":"PBO:0044198"}


id: GO:0008175
data:
  {"annotated_genes":["SJAG_05334","SJAG_02637","SJAG_02386","SJAG_00499","SJAG_00886","SJAG_01314","SJAG_04680","SJAG_04993","SJAG_01269","SJAG_04453","SJAG_00325","SJAG_01261","SJAG_02042","SJAG_02099","SJAG_04735","SJAG_03367","SJAG_04181","SJAG_01375","SJAG_00255","SJAG_04736"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72126,73403,90285],"is_not":false,"summary":null,"term":"GO:0008175"},{"annotations":[84317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[96439,107393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"},{"annotations":[93380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106339"},{"annotations":[77907,105444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[77988,101148,70711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"},{"annotations":[99548,102618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[102619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[102620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160103"},{"annotations":[93381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[96846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052906"},{"annotations":[71418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008176"},{"annotations":[94905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052905"},{"annotations":[93605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[86604,93382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"},{"annotations":[113044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04453":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04993":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0140098","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-6782890","Reactome:R-HSA-6786500","Reactome:R-HSA-6782879","Reactome:R-HSA-6782881","Reactome:R-HSA-6783473","Reactome:R-HSA-6786567"],"termid":"GO:0008175","terms_by_termid":{"GO:0008175":null,"GO:0008176":null,"GO:0016428":null,"GO:0030697":null,"GO:0052735":null,"GO:0052905":null,"GO:0052906":null,"GO:0106050":null,"GO:0106335":null,"GO:0106339":null,"GO:0106340":null,"GO:0141101":null,"GO:0160102":null,"GO:0160103":null,"GO:0160104":null,"GO:0160107":null}}


id: PBO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily B member 1","termid":"PBO:0061912"}


id: FYPO:0002531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm","synonyms":[{"name":"abolished protein localisation to nucleoplasm","type":"exact"},{"name":"abolished protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished","type":"exact"}],"termid":"FYPO:0002531"}


id: GO:0102815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside-5-O-beta-D-glucoside betaine + caffeoyl-CoA = delphinidin 3-O-glucosyl-5-O-caffeoylglucoside + coenzyme A.","definition_xrefs":["EC:2.3.1.153","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"caffeoyl-CoA:delphinidin-3,5-diglucoside 5-O-glucoside-6-O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8233"],"termid":"GO:0102815"}


id: PBO:0059275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 4","termid":"PBO:0059275"}


id: GO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, NAD, NADP, oxygen or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, other acceptors (obsolete GO:0016902)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016902"}


id: PBO:0053042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 3","termid":"PBO:0053042"}


id: PBO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB intronic transcript 1","termid":"PBO:0051950"}


id: PBO:0029973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_gamma_radiation","termid":"PBO:0029973"}


id: GO:0047993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + NAD+ = H+ + NADH + oxomalonate.","definition_xrefs":["RHEA:11284","EC:1.1.1.167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydroxymalonate dehydrogenase activity","secondary_identifiers":["MetaCyc:HYDROXYMALONATE-DEHYDROGENASE-RXN","KEGG_REACTION:R02969"],"synonyms":[{"name":"hydroxymalonate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047993"}


id: PBO:0049130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 1","termid":"PBO:0049130"}


id: MOD:00086
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-palmitoyl-L-lysine.","definition_xrefs":["RESID:AA0077","Unimod:47#K","OMSSA:93","PubMed:2498336","PubMed:7801126","PubMed:7939682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-palmitoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(hexadecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(hexadecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-palmitoyl lysine","type":"exact"},{"name":"N(zeta)-palmitoyllysine","type":"exact"},{"name":"N6-(1-oxohexadecyl)-L-lysine","type":"exact"},{"name":"N6-hexadecanoylated L-lysine","type":"exact"},{"name":"N6-palmitoyl-L-lysine","type":"exact"},{"name":"N6-palmitoylated L-lysine","type":"exact"},{"name":"N6PamLys","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"epsilon-palmitoyllysine","type":"exact"},{"name":"palmitoylationk","type":"exact"}],"termid":"MOD:00086"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: PBO:0074694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70D","termid":"PBO:0074694"}


id: PBO:0042091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 160","termid":"PBO:0042091"}


id: GO:0097490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:BHF","PMID:22790009","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection extension","synonyms":[{"name":"sympathetic neurite extension","type":"narrow"},{"name":"sympathetic neuron process extension","type":"exact"},{"name":"sympathetic neuron protrusion extension","type":"exact"},{"name":"sympathetic neuronal cell projection extension","type":"exact"}],"termid":"GO:0097490"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: PBO:0083905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-dependent monooxygenase involved in ubiquinone biosynthesis; responsible for hydroxylation at position C5 and deamination at C4 during ubiquinone (Coenzyme Q) biosynthesis; localizes to matrix face of mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; human homolog COQ6 can complement yeast null mutant and is implicated in steroid-resistant nephrotic syndrome (SRNS)","termid":"PBO:0083905"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:dph","GOC:lm","GOC:ef","GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: FYPO:0000759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to lead ions. Cells stop growing (and may die) at a concentration of lead ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to lead","synonyms":[{"name":"hypersensitive to lead","type":"exact"},{"name":"sensitive to lead during mitotic cell cycle","type":"related"},{"name":"sensitive to lead during vegetative growth","type":"exact"},{"name":"sensitive to lead ions","type":"exact"}],"termid":"FYPO:0000759"}


id: PBO:0038814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20 pseudogene 1","termid":"PBO:0038814"}


id: FYPO:0004207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased siRNA level","synonyms":[{"name":"increased mature siRNA level","type":"exact"},{"name":"increased siRNA accumulation","type":"related"},{"name":"increased siRNA level during mitotic cell cycle","type":"related"},{"name":"increased siRNA level during vegetative growth","type":"exact"},{"name":"increased siRNA transcript level","type":"exact"},{"name":"increased small interfering RNA level","type":"exact"}],"termid":"FYPO:0004207"}


id: GO:0005773
data:
  {"annotated_genes":["SJAG_02315","SJAG_02962","SJAG_00132","SJAG_03928","SJAG_00824","SJAG_03450","SJAG_01344","SJAG_02344","SJAG_03138","SJAG_04015","SJAG_01236","SJAG_01619","SJAG_03137","SJAG_04955","SJAG_03606","SJAG_01612","SJAG_04714","SJAG_01400","SJAG_00204","SJAG_00115","SJAG_01990","SJAG_04717","SJAG_04426","SJAG_00181","SJAG_01983","SJAG_02581","SJAG_00570","SJAG_03899","SJAG_05184","SJAG_03250","SJAG_02565","SJAG_01471","SJAG_04867","SJAG_00380","SJAG_01080","SJAG_01032","SJAG_03511","SJAG_01274","SJAG_01184","SJAG_02765","SJAG_04506","SJAG_04655","SJAG_03089","SJAG_00212","SJAG_01112","SJAG_01397","SJAG_05194","SJAG_02132","SJAG_00620","SJAG_01598","SJAG_01135","SJAG_01183","SJAG_03652","SJAG_02902","SJAG_02076","SJAG_01095","SJAG_02330","SJAG_01817","SJAG_00821","SJAG_00370","SJAG_00059","SJAG_00051","SJAG_01783","SJAG_00589","SJAG_02289","SJAG_01036","SJAG_00402","SJAG_04221","SJAG_01382","SJAG_02440","SJAG_02957","SJAG_05213","SJAG_03022","SJAG_02943","SJAG_04910","SJAG_02495","SJAG_01447","SJAG_04785","SJAG_02103","SJAG_00534","SJAG_03442","SJAG_02723","SJAG_03100","SJAG_02782","SJAG_04643","SJAG_02578","SJAG_05294","SJAG_03586","SJAG_01219","SJAG_01978","SJAG_02414","SJAG_03406","SJAG_00299","SJAG_03895","SJAG_03316","SJAG_03371","SJAG_02023","SJAG_03848","SJAG_00688","SJAG_03005","SJAG_00457","SJAG_02433","SJAG_01299","SJAG_00561","SJAG_02356","SJAG_02432","SJAG_03976","SJAG_05342","SJAG_03009","SJAG_03315","SJAG_00638","SJAG_00136","SJAG_03447","SJAG_04637","SJAG_02029","SJAG_01027","SJAG_00516","SJAG_01913","SJAG_01320","SJAG_01509","SJAG_03256","SJAG_02694","SJAG_01078","SJAG_03987","SJAG_00650","SJAG_03405","SJAG_05245","SJAG_01033","SJAG_03072","SJAG_00877","SJAG_02117","SJAG_00029","SJAG_02716","SJAG_03386","SJAG_03363","SJAG_04502","SJAG_04975","SJAG_02231","SJAG_02060","SJAG_03400","SJAG_01941","SJAG_04496","SJAG_03909","SJAG_01795","SJAG_01571","SJAG_02424","SJAG_04023","SJAG_02699","SJAG_01868","SJAG_04312","SJAG_04790","SJAG_01324","SJAG_03497","SJAG_03951","SJAG_03403","SJAG_03960","SJAG_01803","SJAG_03355","SJAG_02853","SJAG_02100","SJAG_03508","SJAG_00771","SJAG_04819","SJAG_01319","SJAG_04698","SJAG_04167","SJAG_06309","SJAG_01507","SJAG_04966","SJAG_03313","SJAG_04725","SJAG_02656","SJAG_00732","SJAG_07012","SJAG_04028","SJAG_03725","SJAG_01145","SJAG_01493","SJAG_00018","SJAG_02196","SJAG_03656","SJAG_01991","SJAG_02114","SJAG_01072","SJAG_00587","SJAG_02665","SJAG_04232","SJAG_04616","SJAG_05210","SJAG_04963","SJAG_01505","SJAG_00209","SJAG_03608","SJAG_02603","SJAG_01407","SJAG_04471","SJAG_03667","SJAG_03385","SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60016,65327,69907,110362],"is_not":false,"summary":null,"term":"GO:0005773"},{"annotations":[72556,100205,93400,95170,78129,90205,76146,105925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005776"},{"annotations":[85772,108845],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000421"},{"annotations":[109909,72166,113025,111949,74634,84187,78708,78057,74593,93130,77326,85828,97288,98423,96974,72004,90392,94052,98349,104738,104755,107940,108076,83697,109360,94047,75475,104128,92039,99406,73381,99792,70316,70674,73585,90650,70804,92505,102973,72528,107570,99173,78518,75904,83890,91629,102884,105090,85829,104639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000324"},{"annotations":[109364,89518,109631,108510,70678,83238,93159,97129,110990,93370,101116],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[84855,102030,102541,102741,104591,105665,108445,70445,90210,93570,89367,89493,108760,72413,109526,112135,70732,74355,84809,109521,112477,110047,112890,73755,78272,71167,88502,70935,77387,102038,107028,112633,87676,94372,74730,101073,89658,100340,105534,83790,89311,97412,103190,97092,113253,78639,74027,93873,70600,90181,95451,95700,84787,87736,111340,92895,94068,112692,91587,95724,98989,75296,73354,104678,72193,91219,91543,72068,88580,103605,78866,78352,74234,93148,103996,86082,92593,105159,107050,111680,99321,111751,78522,78668,100274,112349,87132,91330,108621,77837,83495,91697,94208,91961,94332,95415,72421,84869,83772,89366,72871,77299,99204,72806,100495,72788,75626,89631,91457,77865],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"},{"annotations":[108762,78667,83496,105275],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070772"},{"annotations":[89659,100497,88503,103191],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071986"},{"annotations":[113478,95725,71440,76132,95784,100031,89904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902500"},{"annotations":[105095,106215,84061,100831,73308,74827,85133,95048,98425,102006,93844,91659,102496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005774"},{"annotations":[85541,87677,91220,95416,85853,99322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[92161,105161,98090,95490,113763,94424,83791,71311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol.","definition_xrefs":["ISBN:0198506732","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":199,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00029":null,"SJAG_00051":null,"SJAG_00059":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00136":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00370":null,"SJAG_00380":null,"SJAG_00402":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00561":null,"SJAG_00570":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00620":null,"SJAG_00638":null,"SJAG_00650":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01033":null,"SJAG_01036":null,"SJAG_01072":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01095":null,"SJAG_01112":null,"SJAG_01135":null,"SJAG_01145":null,"SJAG_01183":null,"SJAG_01184":null,"SJAG_01219":null,"SJAG_01236":null,"SJAG_01274":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01382":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01407":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01493":null,"SJAG_01505":null,"SJAG_01507":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01598":null,"SJAG_01612":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01868":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01978":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02060":null,"SJAG_02076":null,"SJAG_02100":null,"SJAG_02103":null,"SJAG_02114":null,"SJAG_02117":null,"SJAG_02132":null,"SJAG_02196":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02315":null,"SJAG_02330":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02424":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02440":null,"SJAG_02495":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02581":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02694":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_02962":null,"SJAG_03005":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03315":null,"SJAG_03316":null,"SJAG_03355":null,"SJAG_03363":null,"SJAG_03371":null,"SJAG_03385":null,"SJAG_03386":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03405":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03508":null,"SJAG_03511":null,"SJAG_03586":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03652":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03951":null,"SJAG_03960":null,"SJAG_03976":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04023":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04221":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04426":null,"SJAG_04471":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04637":null,"SJAG_04643":null,"SJAG_04655":null,"SJAG_04698":null,"SJAG_04714":null,"SJAG_04717":null,"SJAG_04725":null,"SJAG_04785":null,"SJAG_04790":null,"SJAG_04819":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05194":null,"SJAG_05210":null,"SJAG_05213":null,"SJAG_05245":null,"SJAG_05294":null,"SJAG_05342":null,"SJAG_06309":null,"SJAG_07012":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"vacuole","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21873635":null},"secondary_identifiers":["Wikipedia:Vacuole"],"synonyms":[{"name":"vacuolar carboxypeptidase Y","type":"related"}],"termid":"GO:0005773","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0000324":null,"GO:0000328":null,"GO:0000329":null,"GO:0000421":null,"GO:0005773":null,"GO:0005774":null,"GO:0005776":null,"GO:0070772":null,"GO:0071986":null,"GO:1902500":null}}


id: PBO:0048515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2 pseudogene 2","termid":"PBO:0048515"}


id: GO:0120194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the dehiscence of an anther to release the pollen grains contained within it.","definition_xrefs":["GOC:lr","PMID:30911018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"anther dehiscence","termid":"GO:0009901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anther dehiscence","termid":"GO:0120194"}


id: PBO:0087692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport and NPC biogenesis and is involved in establishment of a normal nucleocytoplasmic concentration gradient of the GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at the nuclear periphery, including double-strand break repair, transcription and chromatin silencing; homologous to human NUP85 aka NUP75","termid":"PBO:0087692"}


id: PBO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F3 intronic transcript 1","termid":"PBO:0045716"}


id: GO:1901211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber formation","synonyms":[{"name":"down regulation of cardiac chamber formation","type":"exact"},{"name":"down regulation of heart chamber formation","type":"exact"},{"name":"down-regulation of cardiac chamber formation","type":"exact"},{"name":"down-regulation of heart chamber formation","type":"exact"},{"name":"downregulation of cardiac chamber formation","type":"exact"},{"name":"downregulation of heart chamber formation","type":"exact"},{"name":"inhibition of cardiac chamber formation","type":"narrow"},{"name":"inhibition of heart chamber formation","type":"exact"},{"name":"negative regulation of heart chamber formation","type":"exact"}],"termid":"GO:1901211"}


id: PR:O60132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein Tea4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1706.01","synonyms":[{"name":"Spom972h-tea4","type":"exact"},{"name":"cell polarity protein tea4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"win1-interacting SH3 domain protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60132"}


id: GO:1990958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.","definition_xrefs":["PMID:21382270"],"gene_count":0,"genotype_count":0,"name":"obsolete response to thyrotropin-releasing hormone (obsolete GO:1990958)","synonyms":[{"name":"response to TRH","type":"related"}],"termid":"GO:1990958"}


id: PBO:0088588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex BRCT domain subunit Nbs1","termid":"PBO:0088588"}


id: PBO:0088261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TruA family tRNA/ U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0088261"}


id: FYPO:0005851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein biotinylation during vegetative growth","synonyms":[{"name":"abnormal protein biotinylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005851"}


id: PBO:0056247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored junction protein","termid":"PBO:0056247"}


id: FYPO:0004277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}


id: MOD:00516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(2)","type":"related"},{"name":"Hex1HexNAc2","type":"related"}],"termid":"MOD:00516"}


id: PR:O43085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSC E3 ubiquitin ligase complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.10","synonyms":[{"name":"Spom972h-dsc1","type":"exact"},{"name":"defective for SREBP cleavage protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43085"}


id: GO:0019651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of citrate to diacetyl, yielding energy in the form of ATP.","definition_xrefs":["MetaCyc:P126-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate metabolic process","termid":"GO:0006101"},{"relation_name":"is_a","term_name":"non-glycolytic fermentation","termid":"GO:0019662"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tricarboxylic acid catabolic process","termid":"GO:0072352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044248","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"citrate catabolic process to diacetyl","synonyms":[{"name":"citrate fermentation to diacetyl","type":"exact"},{"name":"diacetyl fermentation","type":"exact"}],"termid":"GO:0019651"}


id: PBO:0041805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 16","termid":"PBO:0041805"}


id: GO:0000731
data:
  {"annotated_genes":["SJAG_04190","SJAG_16460","SJAG_02818","SJAG_00153","SJAG_04089","SJAG_02199","SJAG_00611","SJAG_00573","SJAG_04791","SJAG_04877","SJAG_00814","SJAG_00406","SJAG_02667","SJAG_03906","SJAG_05197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90630],"is_not":false,"summary":null,"term":"GO:0000731"},{"annotations":[90801,75978,98250,104417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[70724,99396,94807,98299,112418,99633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[70723,91439,73208,76893,94808,98300,74487,99634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[107000],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[93830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"Synthesis of DNA that proceeds from the broken 3' single-strand DNA end and uses the homologous intact duplex as the template.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in DNA repair","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"DNA repair synthesis","type":"broad"},{"name":"DNA synthesis during DNA repair","type":"related"},{"name":"mitotic DNA repair synthesis","type":"narrow"}],"termid":"GO:0000731","terms_by_termid":{"GO:0000731":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904161":null,"GO:1904332":null}}


id: PBO:0053976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1288","termid":"PBO:0053976"}


id: PBO:0013822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago Nashi interacting protein Mni1 (predicted)","termid":"PBO:0013822"}


id: PBO:0065012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 16","termid":"PBO:0065012"}


id: GO:0009844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The physiological and developmental changes by a seed, spore, pollen grain (microspore), or zygote that occur after release from dormancy, and encompassing events prior to and including the first visible indications of growth.","definition_xrefs":["GOC:lr"],"gene_count":0,"genotype_count":0,"name":"obsolete germination (obsolete GO:0009844)","synonyms":[{"name":"germination","type":"exact"}],"termid":"GO:0009844"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PBO:0004631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase (predicted)","termid":"PBO:0004631"}


id: GO:0010426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group, to C-5 or N-4, of a cytosine located within an asymmetric CHH sequence in a DNA molecule. H stands for an adenine, cytosine, or thymine nucleotide.","definition_xrefs":["GOC:tb","PMID:15861207","GOC:mah","PMID:17239600","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine within a CHH sequence (obsolete GO:0010426)","synonyms":[{"name":"DNA methylation on cytosine within a CNN sequence","type":"exact"},{"name":"cytosine methylation within a CHH sequence","type":"exact"},{"name":"cytosine methylation within a CNN sequence","type":"exact"}],"termid":"GO:0010426"}


id: GO:1900628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"positively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of arugosin biosynthetic process","synonyms":[{"name":"activation of arugosin anabolism","type":"exact"},{"name":"activation of arugosin biosynthesis","type":"exact"},{"name":"activation of arugosin biosynthetic process","type":"narrow"},{"name":"activation of arugosin formation","type":"exact"},{"name":"activation of arugosin synthesis","type":"exact"},{"name":"positive regulation of arugosin anabolism","type":"exact"},{"name":"positive regulation of arugosin biosynthesis","type":"exact"},{"name":"positive regulation of arugosin formation","type":"exact"},{"name":"positive regulation of arugosin synthesis","type":"exact"},{"name":"up regulation of arugosin anabolism","type":"exact"},{"name":"up regulation of arugosin biosynthesis","type":"exact"},{"name":"up regulation of arugosin biosynthetic process","type":"exact"},{"name":"up regulation of arugosin formation","type":"exact"},{"name":"up regulation of arugosin synthesis","type":"exact"},{"name":"up-regulation of arugosin anabolism","type":"exact"},{"name":"up-regulation of arugosin biosynthesis","type":"exact"},{"name":"up-regulation of arugosin biosynthetic process","type":"exact"},{"name":"up-regulation of arugosin formation","type":"exact"},{"name":"up-regulation of arugosin synthesis","type":"exact"},{"name":"upregulation of arugosin anabolism","type":"exact"},{"name":"upregulation of arugosin biosynthesis","type":"exact"},{"name":"upregulation of arugosin biosynthetic process","type":"exact"},{"name":"upregulation of arugosin formation","type":"exact"},{"name":"upregulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900628"}


id: PBO:0076064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 2","termid":"PBO:0076064"}


id: GO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any viral process that results in the inhibition of host cell type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["UniProtKB-KW:KW-1113","GOC:add","VZ:875","GOC:sp","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of type I interferon production","termid":"GO:0032480"},{"relation_name":"is_a","term_name":"suppression by virus of host cytokine production","termid":"GO:0046775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host type I interferon production","synonyms":[{"name":"negative regulation by virus of host type I interferon production","type":"exact"},{"name":"suppression by virus of host interferon type I production","type":"exact"},{"name":"suppression by virus of host type I IFN production","type":"exact"}],"termid":"GO:0039501"}


id: PBO:0063329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 5","termid":"PBO:0063329"}


id: PBO:0059445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A18","termid":"PBO:0059445"}


id: PBO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane alkali metal cation/H+ antiporter Sod22","termid":"PBO:0002059"}


id: GO:0071474
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88019],"is_not":false,"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular HOG response","type":"exact"},{"name":"cellular hypertonic response","type":"exact"},{"name":"cellular response to hypertonicity","type":"exact"}],"termid":"GO:0071474","terms_by_termid":{"GO:0071474":null}}


id: GO:0043900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a multi-organism process, a process in which an organism has an effect on another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multi-organism process (obsolete GO:0043900)","termid":"GO:0043900"}


id: GO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C4b product of the classical complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"complement component C4b receptor activity","termid":"GO:0001861"}


id: GO:1903791
data:
  {"annotated_genes":["SJAG_04714","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83845],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[91102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which uracil is transported across a membrane.","definition_xrefs":["GO_REF:0000069","PMID:8948441","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transport","termid":"GO:0015857"},{"relation_name":"is_a","term_name":"pyrimidine nucleobase transmembrane transport","termid":"GO:1904082"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03970":null,"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"uracil transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903791","terms_by_termid":{"GO:0098721":null,"GO:1905530":null}}


id: PBO:0062549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily N member 1 pseudogene","termid":"PBO:0062549"}


id: PR:O74540
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fmd3 gene.","definition_xrefs":["UniProtKB:O74540","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.04c","synonyms":[{"name":"FALDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FLD 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GSH-FDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fmd3","type":"exact"},{"name":"glutathione-dependent formaldehyde dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74540"}


id: GO:0043880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of crotonyl-CoA to butyryl-CoA.","definition_xrefs":["InterPro:IPR010085","PMID:11162231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"crotonyl-CoA reductase activity","synonyms":[{"name":"CCR","type":"exact"},{"name":"crotonyl-coenzyme A reductase activity","type":"exact"}],"termid":"GO:0043880"}


id: PBO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage factor one Cft1 (predicted)","termid":"PBO:0003476"}


id: PBO:0017481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_downstream_of_or_within","termid":"PBO:0017481"}


id: PBO:0087380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol binding protein involved in the export of acetylated sterols; role in sterol export is redundant with that of PRY1; redundant role with PRY1 and PRY3 in the export of free fatty acids; may be involved in detoxification of hydrophobic compounds; secreted glycoprotein and member of the CAP protein superfamily (cysteine-rich secretory proteins (CRISP), antigen 5, and pathogenesis related 1 proteins)","termid":"PBO:0087380"}


id: GO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 7 signaling pathway","termid":"GO:0034155"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"positive regulation of TLR7 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034157"}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: PBO:0069179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 433, pseudogene","termid":"PBO:0069179"}


id: SO:0000431
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_LTR_component","termid":"SO:0000849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_three_prime_LTR_region","synonyms":[{"name":"U3 3' long terminal repeat region","type":"exact"},{"name":"U3 three prime LTR region","type":"exact"}],"termid":"SO:0000431"}


id: PBO:0028870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_poly(A)_tail_length","termid":"PBO:0028870"}


id: PBO:0090476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar calcium transmembrane transporter","termid":"PBO:0090476"}


id: PBO:0088970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease, unknown biological role, associated with COP1 coated vesicle","termid":"PBO:0088970"}


id: GO:0006408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"},{"relation_name":"is_a","term_name":"ncRNA export from nucleus","termid":"GO:0097064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006913","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"snRNA export from nucleus","synonyms":[{"name":"snRNA export from cell nucleus","type":"exact"},{"name":"snRNA export out of nucleus","type":"exact"},{"name":"snRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"snRNA-nucleus export","type":"exact"}],"termid":"GO:0006408"}


id: PBO:0040942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 13","termid":"PBO:0040942"}


id: PBO:0036258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pex12 involved in peroxisome organization and biogenesis (predicted)","termid":"PBO:0036258"}


id: FYPO:0001963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of papulacandin B than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to papulacandin B","synonyms":[{"name":"resistance to papulacandin B during mitotic cell cycle","type":"related"},{"name":"resistance to papulacandin B during vegetative growth","type":"exact"},{"name":"resistant to papulacandin B","type":"exact"}],"termid":"FYPO:0001963"}


id: PBO:0063184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX homeobox 4","termid":"PBO:0063184"}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: PBO:0042575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2B","termid":"PBO:0042575"}


id: PBO:0067414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 525, pseudogene","termid":"PBO:0067414"}


id: PBO:0026821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin-specific_protease_activity","termid":"PBO:0026821"}


id: PATO:0001979
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being partly divided into a determinate number of regions.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lobed","termid":"PATO:0001979"}


id: PBO:0028403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinone_binding","termid":"PBO:0028403"}


id: GO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:dph","GOC:pg","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lateral pseudopodium assembly (obsolete GO:0031277)","synonyms":[{"name":"activation of lateral pseudopodium formation","type":"narrow"},{"name":"positive regulation of lateral pseudopodium formation","type":"related"},{"name":"stimulation of lateral pseudopodium formation","type":"narrow"},{"name":"up regulation of lateral pseudopodium formation","type":"related"},{"name":"up-regulation of lateral pseudopodium formation","type":"related"},{"name":"upregulation of lateral pseudopodium formation","type":"related"}],"termid":"GO:0031277"}


id: GO:0009252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan metabolic process","termid":"GO:0000270"},{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"cell wall macromolecule biosynthetic process","termid":"GO:0044038"},{"relation_name":"part_of","term_name":"peptidoglycan-based cell wall biogenesis","termid":"GO:0009273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan biosynthetic process","secondary_identifiers":["GO:0009285"],"synonyms":[{"name":"murein biosynthesis","type":"exact"},{"name":"murein biosynthetic process","type":"exact"},{"name":"peptidoglycan anabolism","type":"exact"},{"name":"peptidoglycan biosynthesis","type":"exact"},{"name":"peptidoglycan formation","type":"exact"},{"name":"peptidoglycan synthesis","type":"exact"}],"termid":"GO:0009252"}


id: PBO:0041555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 38","termid":"PBO:0041555"}


id: SO:0100005
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 4 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i psi -10 bounds -50 to 30, res i+1: phi -90 bounds -120 to -60, res i+1: psi -10 bounds -50 to 30, res i+2: phi -75 bounds -100 to -50, res i+2: psi 140 bounds 110 to 170. The extra restriction of the length of the O to O distance is similar, that it be less than 5 Angstrom. In this case these two Oxygen atoms are the main chain carbonyl oxygen atoms of residues i-1 and i+2.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_left_handed_four","synonyms":[{"name":"catmat-4l","type":"exact"}],"termid":"SO:0100005"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: GO:0061605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly = diphosphate [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly-AMP.","definition_xrefs":["GOC:dph","EC:2.7.7.80","PMID:18154309","PMID:22370186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"molybdopterin-synthase adenylyltransferase activity","secondary_identifiers":["RHEA:43616"],"termid":"GO:0061605"}


id: GO:1903366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fear response.","definition_xrefs":["GOC:mr","PMID:8677262","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"negatively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fear response","synonyms":[{"name":"down regulation of fear response","type":"exact"},{"name":"down regulation of physiological fear response","type":"exact"},{"name":"down-regulation of fear response","type":"exact"},{"name":"down-regulation of physiological fear response","type":"exact"},{"name":"downregulation of fear response","type":"exact"},{"name":"downregulation of physiological fear response","type":"exact"},{"name":"inhibition of fear response","type":"narrow"},{"name":"inhibition of physiological fear response","type":"narrow"},{"name":"negative regulation of physiological fear response","type":"exact"}],"termid":"GO:1903366"}


id: FYPO:0001494
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is elongated, and contains more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000032","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell","synonyms":[{"name":"elongated inviable multiseptate cell during vegetative growth","type":"exact"},{"name":"elongated multiseptate inviable vegetative cell","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0001494"}


id: PBO:0046435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenetically induced MYC interacting lncRNA 1","termid":"PBO:0046435"}


id: PBO:0029696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0029696"}


id: PBO:0071248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 89","termid":"PBO:0071248"}


id: GO:0034076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidosqualene = cucurbitadienol.","definition_xrefs":["PMID:18033581","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"cucurbitadienol synthase activity","termid":"GO:0034076"}


id: PBO:0066102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS and EF-hand domain containing","termid":"PBO:0066102"}


id: FYPO:0007504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which H3-K9 specific histone demethylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal histone demethylase activity","termid":"FYPO:0007503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone demethylase activity (H3-K9 specific)","synonyms":[{"name":"histone demethylase activity (H3-K9 specific) abolished","type":"exact"}],"termid":"FYPO:0007504"}


id: GO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + ethylbenzene + H2O = (S)-1-phenylethanol + AH(2).","definition_xrefs":["RHEA:17897","EC:1.17.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ethylbenzene hydroxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0234","KEGG_REACTION:R05745","MetaCyc:RXN-1301"],"synonyms":[{"name":"ethylbenzene dehydrogenase activity","type":"related"},{"name":"ethylbenzene:(acceptor) oxidoreductase activity","type":"related"}],"termid":"GO:0018693"}


id: FYPO:0006346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle has two poles and can elongate during anaphase, but has decreased and non-uniform thickness along its length.","definition_xrefs":["PomBase:mah","PMID:12951601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0000120","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"bipolar mitotic spindle with decreased, irregular thickness","synonyms":[{"name":"bipolar mitotic spindle with decreased, irregular thickness during mitotic cell cycle","type":"exact"},{"name":"bipolar mitotic spindle with decreased, irregular thickness during vegetative growth","type":"exact"},{"name":"decreased, irregular bipolar mitotic spindle thickness","type":"exact"},{"name":"thin, discontinuous bipolar mitotic spindle","type":"related"}],"termid":"FYPO:0006346"}


id: PBO:0108705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Hba1","termid":"PBO:0108705"}


id: PBO:0061024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 7","termid":"PBO:0061024"}


id: SO:1001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1001244 alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping (obsolete SO:1001244)","synonyms":[{"name":"alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non-overlapping","type":"related"}],"termid":"SO:1001244"}


id: PBO:0072511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 40","termid":"PBO:0072511"}


id: PBO:0030325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization","termid":"PBO:0030325"}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: PBO:0060865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 8","termid":"PBO:0060865"}


id: PBO:0089258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex polyribonucleotide 5'-hydroxyl-kinase subunit","termid":"PBO:0089258"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0071027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 29","termid":"PBO:0071027"}


id: PBO:0064910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 1 like (pseudogene)","termid":"PBO:0064910"}


id: GO:0106294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + O2 = NADP + hydrogen peroxide (H2O2).","definition_xrefs":["RHEA:11260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD(P)H oxidase H2O2-forming activity","termid":"GO:0016174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH oxidase H202-forming activity","termid":"GO:0106294"}


id: GO:0008453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanine + glyoxylate = pyruvate + glycine.","definition_xrefs":["EC:2.6.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"alanine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-389684","Reactome:R-HSA-904864","RHEA:24248"],"synonyms":[{"name":"AGT activity","type":"related"},{"name":"L-alanine-glycine transaminase activity","type":"related"},{"name":"L-alanine:glyoxylate aminotransferase activity","type":"related"},{"name":"alanine--glyoxylate aminotransferase activity","type":"related"},{"name":"alanine-glyoxylate aminotransferase activity","type":"exact"},{"name":"alanine-glyoxylic aminotransferase activity","type":"related"}],"termid":"GO:0008453"}


id: GO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal epinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal adrenaline","type":"exact"}],"termid":"GO:0003112"}


id: PBO:0000750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated lipase Atg15","termid":"PBO:0000750"}


id: GO:0005754
data:
  {"annotated_genes":["SJAG_02564","SJAG_02598"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72608,88463],"is_not":false,"summary":null,"term":"GO:0005754"}]},"cv_name":"cellular_component","definition":"The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting ATP synthase, catalytic core","termid":"GO:0045267"},{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"},{"relation_name":"part_of","term_name":"mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)","termid":"GO:0000275"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02564":null,"SJAG_02598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase, catalytic core","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0005754","terms_by_termid":{"GO:0005754":null}}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["PMID:15684033","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: PBO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.-","termid":"PBO:0000508"}


id: GO:1902125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-pinoresinol.","definition_xrefs":["PMID:8910615","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"heterocycle catabolic process","termid":"GO:0046700"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0019748"],"is_obsolete":false,"name":"(+)-pinoresinol catabolic process","synonyms":[{"name":"(+)-pinoresinol breakdown","type":"exact"},{"name":"(+)-pinoresinol catabolism","type":"exact"},{"name":"(+)-pinoresinol degradation","type":"exact"}],"termid":"GO:1902125"}


id: PBO:0061310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 3","termid":"PBO:0061310"}


id: PBO:0047348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBRSL1 pseudogene 1","termid":"PBO:0047348"}


id: PBO:0015663
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae CDC16","termid":"PBO:0015663"}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: PBO:0049148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 5","termid":"PBO:0049148"}


id: GO:0097626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arginine from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["PMID:8195186","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"},{"relation_name":"is_a","term_name":"low-affinity basic amino acid transmembrane transporter activity","termid":"GO:0097625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low-affinity L-arginine transmembrane transporter activity","synonyms":[{"name":"low affinity L-arginine transmembrane transporter activity","type":"exact"}],"termid":"GO:0097626"}


id: GO:0047489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a pectate = a pectate + 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate. This reaction is the eliminative cleavage of 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate from the reducing end of pectate, i.e. de-esterified pectin.","definition_xrefs":["EC:4.2.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pectate disaccharide-lyase activity","secondary_identifiers":["RHEA:57104","MetaCyc:4.2.2.9-RXN"],"synonyms":[{"name":"(1->4)-alpha-D-galacturonan reducing-end-disaccharide-lyase activity","type":"related"},{"name":"Exo-PATE activity","type":"related"},{"name":"Exo-PGL activity","type":"related"},{"name":"PATE activity","type":"related"},{"name":"exo-PATE","type":"related"},{"name":"exo-PGL","type":"related"},{"name":"exopectate lyase activity","type":"related"},{"name":"exopectic acid transeliminase activity","type":"related"},{"name":"exopolygalacturonate lyase activity","type":"related"},{"name":"exopolygalacturonic acid-trans-eliminase activity","type":"related"},{"name":"pectate exo-lyase activity","type":"related"}],"termid":"GO:0047489"}


id: GO:0140403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the suppression of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30584105","PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host innate immune response by symbiont","termid":"GO:0140404"},{"relation_name":"is_a","term_name":"effector-mediated suppression of host defense response","termid":"GO:0140590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated suppression of host innate immune response","synonyms":[{"name":"effector dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector triggered suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-dependent suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host immune innate response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immune response by symbiont","type":"exact"},{"name":"effector-mediated suppression of host innate immunity","type":"exact"},{"name":"effector-triggered suppression of host immune innate response by symbiont","type":"exact"}],"termid":"GO:0140403"}


id: PBO:0081363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF197 antisense RNA 1","termid":"PBO:0081363"}


id: PBO:0083580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; substantially overlaps YMR295C; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0083580"}


id: GO:0097739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of ferrichrome biosynthetic process in response to an iron stimulus.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ferrichrome biosynthetic process","termid":"GO:1905569"},{"relation_name":"part_of","term_name":"cellular response to iron ion","termid":"GO:0071281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ferrichrome biosynthetic process in response to iron","termid":"GO:0097739"}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: GO:0010333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of cyclic terpenes through the cyclization of linear terpenes (e.g. isopentenyl-PP, geranyl-PP, farnesyl-PP and geranylgeranyl-PP) containing varying numbers of isoprene units.","definition_xrefs":["EC:4.2.3.-","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"terpene synthase activity","termid":"GO:0010333"}


id: PBO:0047353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 6","termid":"PBO:0047353"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["PubMed:12216740","Unimod:30#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: SO:0001290
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N4-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N4_methylcytidine","secondary_identifiers":["RNAMOD:082"],"synonyms":[{"name":"N4 methylcytidine","type":"exact"},{"name":"N4-methylcytidine","type":"exact"},{"name":"m4C","type":"exact"}],"termid":"SO:0001290"}


id: GO:0018630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxytoluene + NADH + O2 = NAD+ + OH- + 3-hydroxybenzyl alcohol.","definition_xrefs":["UM-BBD_reactionID:r0081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3,5-xylenol methylhydroxylase activity","secondary_identifiers":["MetaCyc:3-5-XYLENOL-METHYLHYDROXYLASE-RXN","EC:1.14.13.-"],"termid":"GO:0018630"}


id: FYPO:0007079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that occurs as part of the second meiotic nuclear division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal initial meiotic spindle pole body separation in meiosis II","synonyms":[{"name":"normal initial meiotic spindle pole body separation in second meiotic nuclear division","type":"exact"},{"name":"normal initial mitotic SPB separation in meiosis II","type":"exact"},{"name":"normal initial spindle pole body separation at meiosis II","type":"exact"}],"termid":"FYPO:0007079"}


id: GO:0004592
data:
  {"annotated_genes":["SJAG_03679"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72267],"is_not":false,"summary":null,"term":"GO:0004592"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + (R)-pantoate + beta-alanine = AMP + diphosphate + (R)-pantothenate.","definition_xrefs":["EC:6.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"pantoate-beta-alanine ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:PANTOATE-BETA-ALANINE-LIG-RXN","RHEA:10912"],"synonyms":[{"name":"(R)-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"D-pantoate:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"pantoate-activating enzyme activity","type":"related"},{"name":"pantoic-activating enzyme activity","type":"related"},{"name":"pantothenate synthetase activity","type":"related"}],"termid":"GO:0004592","terms_by_termid":{"GO:0004592":null}}


id: GO:0098776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins across the cell outer membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein transport across the cell outer membrane","termid":"GO:0098776"}


id: PBO:0110100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tbasic amino acid ransmembrane transporter","termid":"PBO:0110100"}


id: GO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction","synonyms":[{"name":"down regulation of T cell tolerance induction","type":"exact"},{"name":"down-regulation of T cell tolerance induction","type":"exact"},{"name":"downregulation of T cell tolerance induction","type":"exact"},{"name":"inhibition of T cell tolerance induction","type":"narrow"},{"name":"negative regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of T-cell tolerance induction","type":"exact"},{"name":"negative regulation of T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002665"}


id: PBO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 6","termid":"PBO:0050086"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: PBO:0001704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR191","termid":"PBO:0001704"}


id: PBO:0058006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3929","termid":"PBO:0058006"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["UniProtKB:O42991","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: PBO:0064602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 2 homeobox 3","termid":"PBO:0064602"}


id: GO:0106423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-L-tyrosyl-[tubulin] + H2O = C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-[tubulin] + L-tyrosine.","definition_xrefs":["PMID:35482892","PMID:29146869","RHEA:57444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"tubulin-tyrosine carboxypeptidase","secondary_identifiers":["EC:3.4.17.17"],"synonyms":[{"name":"tubulinyl-Tyr carboxypeptidase","type":"exact"}],"termid":"GO:0106423"}


id: PR:C6Y4C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.12","synonyms":[{"name":"Spom972h-spo13","type":"exact"}],"termid":"PR:C6Y4C9"}


id: RO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which at least one of the partners is an organism and the other is either an organism or an abiotic entity with which the organism interacts.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"},{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotically_interacts_with","termid":"RO:0002437"}


id: PBO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion","termid":"PBO:0031674"}


id: GO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall pectin (obsolete GO:0052357)","termid":"GO:0052357"}


id: GO:0089701
data:
  {"annotated_genes":["SJAG_00225","SJAG_03995"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72103,75758],"is_not":false,"summary":null,"term":"GO:0089701"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of conserved large and small U2AF subunits that contributes to spliceosomal RNA splicing by binding to consensus sequences at the 3' splice site. U2AF is required to stabilize the association of the U2 snRNP with the branch point.","definition_xrefs":["PMID:15231733","GOC:dos","PMID:2963698","PMID:8657565","GOC:mah","PMID:1538748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00225":null,"SJAG_03995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"U2AF complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"U2 accessory factor","type":"exact"},{"name":"U2AF","type":"exact"}],"termid":"GO:0089701","terms_by_termid":{"GO:0089701":null}}


id: PBO:0029225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_homologous_chromosome_pairing","termid":"PBO:0029225"}


id: PBO:0002816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set3","termid":"PBO:0002816"}


id: FYPO:0000392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the metaphase/anaphase transition under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abnormal cell cycle arrest at mitotic metaphase/anaphase transition (obsolete FYPO:0000392)","synonyms":[{"name":"abnormal cell cycle arrest at metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest at mitotic metaphase/anaphase transition with condensed chromosomes","type":"exact"},{"name":"abnormal mitotic cell cycle arrest at metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase arrest","type":"exact"},{"name":"cell cycle passage through the metaphase-anaphase transition: arrested","type":"related"}],"termid":"FYPO:0000392"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: GO:0070037
data:
  {"annotated_genes":["SJAG_02024"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74871],"is_not":false,"summary":null,"term":"GO:0070037"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a pseudouridine residue in an rRNA molecule.","definition_xrefs":["GOC:mah","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methyltransferase activity","termid":"GO:0008649"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"rRNA (pseudouridine) methyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-6790906"],"termid":"GO:0070037","terms_by_termid":{"GO:0070037":null}}


id: GO:0018800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxopent-3-ene-1,2,5-tricarboxylate = 2-oxohept-3-enedioate + CO2.","definition_xrefs":["EC:4.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0367","RHEA:14397","MetaCyc:4.1.1.68-RXN"],"synonyms":[{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,6-dioate decarboxylase activity","type":"related"},{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase activity","type":"exact"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase (2-oxohept-3-enedioate-forming)","type":"related"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase activity","type":"related"},{"name":"HpaG-2","type":"related"},{"name":"HpaG2","type":"related"},{"name":"OPET decarboxylase activity","type":"exact"}],"termid":"GO:0018800"}


id: PBO:0092004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit (21S) rRNA, rnl","termid":"PBO:0092004"}


id: PBO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF/Mak21 family (predicted)","termid":"PBO:0004722"}


id: PBO:0046157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAVL4 antisense RNA 1","termid":"PBO:0046157"}


id: FYPO:0003667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which crossover junction endodeoxyribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal crossover junction endodeoxyribonuclease activity","termid":"FYPO:0003666"},{"relation_name":"is_a","term_name":"abolished endodeoxyribonuclease activity","termid":"FYPO:0007141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished crossover junction endodeoxyribonuclease activity","synonyms":[{"name":"crossover junction endodeoxyribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0003667"}


id: PBO:0046413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial mitogen","termid":"PBO:0046413"}


id: PBO:0080505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL divergent transcript","termid":"PBO:0080505"}


id: GO:0030666
data:
  {"annotated_genes":["SJAG_00104","SJAG_01167","SJAG_00800","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103658,77159,73806,106837],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endocytic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"endocytic vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0030666","terms_by_termid":{"GO:0030122":null}}


id: SO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA fragment used as a reagent to detect the polymorphic genomic loci by hybridizing against the genomic DNA digested with a given restriction enzyme.","definition_xrefs":["GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_fragment","termid":"SO:0000412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Restriction_fragment_length_polymorphism"],"synonyms":[{"name":"RFLP","type":"exact"},{"name":"RFLP fragment","type":"exact"},{"name":"restriction fragment length polymorphism","type":"exact"}],"termid":"SO:0000193"}


id: GO:0001654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.","definition_xrefs":["GOC:jl","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye development","secondary_identifiers":["GO:0042460","Wikipedia:Eye_development"],"termid":"GO:0001654"}


id: PBO:0050486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXB cluster antisense RNA 1","termid":"PBO:0050486"}


id: GO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the proepicardium from its formation to the mature structure. The proepicardium is an outpouching of the septum transversum.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"septum transversum development","termid":"GO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proepicardium development","termid":"GO:0003342"}


id: PBO:0082575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase III; catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for synthesis of the majority of cell wall chitin, the chitin ring during bud emergence, and spore wall chitosan; contains overlapping di-leucine and di-acidic signals that mediate, respectively, intracellular trafficking by AP-1 and trafficking to plasma membrane by exomer complex; requires AP-3 complex for its intracellular retention","termid":"PBO:0082575"}


id: PBO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8","termid":"PBO:0090301"}


id: GO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a motile spore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore movement on or near host (obsolete GO:0075230)","termid":"GO:0075230"}


id: PBO:0074826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 22","termid":"PBO:0074826"}


id: RO:0002511
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of transcribed from","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_to","termid":"RO:0002511"}


id: GO:0047901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: formyl-CoA + H2O = CoA + formate + H+.","definition_xrefs":["RHEA:19741","EC:3.1.2.10"],"gene_count":0,"genotype_count":0,"name":"obsolete formyl-CoA hydrolase activity (obsolete GO:0047901)","synonyms":[{"name":"formyl coenzyme A hydrolase activity","type":"related"}],"termid":"GO:0047901"}


id: GO:1901862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"negatively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle tissue development","synonyms":[{"name":"down regulation of muscle tissue development","type":"exact"},{"name":"down-regulation of muscle tissue development","type":"exact"},{"name":"downregulation of muscle tissue development","type":"exact"},{"name":"inhibition of muscle tissue development","type":"narrow"}],"termid":"GO:1901862"}


id: GO:0160108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process whose specific outcome is the progression of a gross anatomical part of an animal from an initial immature state, to a later, more mature state.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"animal gross anatomical part developmental process","synonyms":[{"name":"animal development","type":"related"}],"termid":"GO:0160108"}


id: GO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylglycerol, through sequential deacylation and re-acylation reactions, to generate phosphatidylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:18458083","PMID:15485873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol acyl-chain remodeling","synonyms":[{"name":"phosphatidylglycerol acyl-chain remodelling","type":"exact"}],"termid":"GO:0036148"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: GO:0031776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a melanin-concentrating hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"melanin-concentrating hormone receptor binding","synonyms":[{"name":"melanin-concentrating hormone receptor ligand","type":"narrow"}],"termid":"GO:0031776"}


id: PBO:0062562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AB member 1 pseudogene","termid":"PBO:0062562"}


id: GO:0032115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol + NADP+ = L-sorbose + H+ + NADPH. The reaction may occur, to a minor extent, in the reverse direction.","definition_xrefs":["EC:1.1.1.289","RHEA:14609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"sorbose reductase activity","secondary_identifiers":["KEGG_REACTION:R07346","MetaCyc:1.1.1.289-RXN"],"synonyms":[{"name":"D-glucitol:NADP+ oxidoreductase activity","type":"related"},{"name":"Sou1p","type":"related"}],"termid":"GO:0032115"}


id: RO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between molecular entities A and B where A can physically interact with B and in doing so regulates a process that B is capable of.  For example, A and B may be gene products and binding of B by A regulates the kinase activity of B.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"RO:0002436"},{"relation_name":"is_a","term_name":"causally_influences","termid":"RO:0002566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity_directly_regulates_activity_of","synonyms":[{"name":"molecularly controls","type":"exact"}],"termid":"RO:0002448"}


id: GO:0032294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating Schwann cell membrane encircles an axon in the peripheral nervous system. A single non-myelinating Schwann cell will typically associate with multiple axons.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-myelinated axon ensheathment","termid":"GO:0032285"},{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons in peripheral nervous system","type":"exact"}],"termid":"GO:0032294"}


id: GO:1902781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["PMID:22958739","GOC:mengo_curators","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to nonane","termid":"GO:1902780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nonane","termid":"GO:1902781"}


id: PR:O43053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12413:SF0","PRO:DNx","OMA:SCHPO04028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.01c","secondary_identifiers":["UniProtKB:O43053"],"synonyms":[{"name":"Dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG6","type":"exact"},{"name":"asparagine-linked glycosylation protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43053"}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: GO:1903251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.","definition_xrefs":["PMID:24934224","GO_REF:0000086","PMID:22231168","GOC:TermGenie","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-ciliated epithelial cell differentiation","synonyms":[{"name":"multiciliate cell differentiation","type":"broad"}],"termid":"GO:1903251"}


id: PBO:0060299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 9","termid":"PBO:0060299"}


id: PBO:0053975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1287","termid":"PBO:0053975"}


id: GO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["PMID:11163136","PMID:11250167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division","synonyms":[{"name":"neuroblast cell division","type":"exact"}],"termid":"GO:0055057"}


id: PBO:0067542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 688, pseudogene","termid":"PBO:0067542"}


id: GO:0014839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myoblast migrates along an entire fiber to the site of injury. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["PMID:16607119","CL:0000056","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast migration","termid":"GO:0051451"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast migration involved in skeletal muscle regeneration","synonyms":[{"name":"mononucleate cell migration involved in skeletal muscle regeneration","type":"broad"}],"termid":"GO:0014839"}


id: GO:1905354
data:
  {"annotated_genes":["SJAG_04153","SJAG_02374","SJAG_02991","SJAG_03745","SJAG_04321","SJAG_01431","SJAG_04818","SJAG_01521","SJAG_04006","SJAG_01581","SJAG_01191","SJAG_00854","SJAG_01818","SJAG_03179","SJAG_02275","SJAG_04824","SJAG_03789","SJAG_04084"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71484,71775,111017,76486,72338,74130,74478,72963,75369,74019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000177"},{"annotations":[99521,113599,87330,90526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[70887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045025"},{"annotations":[75368,110581,70861,74477,72337,74018,71483,73212,96502,71774,72962,74129,76485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000176"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of exoribonuclease activity.","definition_xrefs":["PMID:17174896","GO_REF:0000088","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01581":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02991":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exoribonuclease complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:1905354","terms_by_termid":{"GO:0000176":null,"GO:0000177":null,"GO:0045025":null,"GO:0090730":null}}


id: PBO:0065054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 8","termid":"PBO:0065054"}


id: PBO:0063739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 4","termid":"PBO:0063739"}


id: PBO:0110197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and nuclear tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110197"}


id: GO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the amine 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine, a serotonin receptor agonist that can act as a psychedelic drug.","definition_xrefs":["PMID:19057895","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding","synonyms":[{"name":"(+/-)2-(4-iodo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine binding","type":"exact"},{"name":"1-(4-iodo-2,5-dimethoxyphenyl)-2-aminopropane binding","type":"exact"},{"name":"4-iodo-2,5-dimethoxyphenylisopropylamine binding","type":"exact"}],"termid":"GO:0071886"}


id: PBO:0040026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing X-linked 2","termid":"PBO:0040026"}


id: PBO:0030997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology","termid":"PBO:0030997"}


id: PBO:0052141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNH7 antisense RNA 1","termid":"PBO:0052141"}


id: PBO:0079621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L6","termid":"PBO:0079621"}


id: FYPO:0006380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"normal protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006380"}


id: GO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one T cell to one or more other T cells via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte aggregation","termid":"GO:0071593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell aggregation","synonyms":[{"name":"T lymphocyte aggregation","type":"exact"},{"name":"T-cell aggregation","type":"exact"},{"name":"T-lymphocyte aggregation","type":"exact"}],"termid":"GO:0070489"}


id: GO:1903808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tyrosine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","PMID:23895341","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine transport","termid":"GO:0015828"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine import across plasma membrane","secondary_identifiers":["GO:0036232"],"synonyms":[{"name":"L-tyrosine import","type":"broad"},{"name":"L-tyrosine import into cell","type":"exact"},{"name":"L-tyrosine uptake","type":"exact"}],"termid":"GO:1903808"}


id: PBO:0084343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol 14-alpha-demethylase; catalyzes C-14 demethylation of lanosterol to form 4,4''-dimethyl cholesta-8,14,24-triene-3-beta-ol in ergosterol biosynthesis pathway; transcriptionally down-regulated when ergosterol is in excess; member of cytochrome P450 family; associated and coordinately regulated with the P450 reductase Ncp1p; human CYP51A1 functionally complements the lethality of the erg11 null mutation","termid":"PBO:0084343"}


id: GO:2000925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"negatively_regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellodextrin metabolic process","synonyms":[{"name":"negative regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000925"}


id: PBO:0045601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 12 (pseudogene)","termid":"PBO:0045601"}


id: PBO:0082871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein; implicated in the membrane insertion of tail-anchored C-terminal single transmembrane domain proteins; may function in transport of glycosylphosphatidylinositol intermediates into the ER lumen; required for normal intracellular sterol distribution; human ARV1, required for normal cholesterol and bile acid homeostasis, can complement yeast arv1 null mutant; human variant causing early onset epileptic encephalopathy is unable to rescue the yeast null","termid":"PBO:0082871"}


id: PBO:0070686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 57","termid":"PBO:0070686"}


id: GO:1903185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-dopa.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:8822146","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"L-dopa metabolic process","termid":"GO:1903184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-dopa biosynthetic process","synonyms":[{"name":"L-dopa anabolism","type":"exact"},{"name":"L-dopa biosynthesis","type":"exact"},{"name":"L-dopa formation","type":"exact"},{"name":"L-dopa synthesis","type":"exact"}],"termid":"GO:1903185"}


id: FYPO:0000032
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[114397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[114629],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[114393],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}],"single_locus_phenotype":[{"annotations":[114385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[114316,114528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[114418],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[114323,114386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[114630],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"},{"annotations":[114383,114382],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0000118"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytokinesis is abnormal. Cytokinesis is part of the cell cycle and results in the division of the cytoplasm of a cell and its separation into two daughter cells.","definition_xrefs":["PomBase:mah","GO:0000281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell division","termid":"FYPO:0000186"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_02392","SJAG_04280","SJAG_00118","SJAG_03596","SJAG_01143"],"name":"abnormal cytokinesis","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_00118","SJAG_02592","SJAG_04522","SJAG_01143","SJAG_03596"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","sty1delta","mid1delta","rga4delta","mid2delta"],"synonyms":[{"name":"abnormal cell cycle cytokinesis","type":"exact"},{"name":"abnormal cytokinesis during mitotic cell cycle","type":"related"},{"name":"abnormal cytokinesis during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinesis","type":"exact"},{"name":"cytokinesis defects","type":"exact"},{"name":"cytokinesis: abnormal","type":"related"}],"termid":"FYPO:0000032","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:Q10239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- chz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.Z-specific chaperone chz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.06c","synonyms":[{"name":"Spom972h-chz1","type":"exact"}],"termid":"PR:Q10239"}


id: PBO:0075840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU72 like 1","termid":"PBO:0075840"}


id: GO:0008121
data:
  {"annotated_genes":["SJAG_01490","SJAG_02646","SJAG_00755","SJAG_07006","SJAG_03490","SJAG_MIT03","SJAG_00601"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99492,99894,103300,108611,112772,113218,114077],"is_not":false,"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.","definition_xrefs":["RHEA:11484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_02646":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ubiquinol-cytochrome-c reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0045153","Reactome:R-HSA-164651","GO:0045154","EC:7.1.1.8","MetaCyc:1.10.2.2-RXN"],"synonyms":[{"name":"complex III (mitochondrial electron transport) activity","type":"narrow"},{"name":"cytochrome","type":"broad"},{"name":"cytochrome a","type":"narrow"},{"name":"cytochrome a3/copper complex","type":"narrow"},{"name":"cytochrome b562","type":"narrow"},{"name":"cytochrome b566","type":"narrow"},{"name":"cytochrome c1","type":"narrow"},{"name":"electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity","type":"related"},{"name":"electron transporter, transferring electrons within cytochrome c oxidase complex activity","type":"related"},{"name":"mitochondrial electron transport complex III","type":"related"},{"name":"soluble cytochrome b562","type":"narrow"},{"name":"ubiquinol-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c-2 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c1 oxidoreductase activity","type":"related"},{"name":"ubiquinol-cytochrome c2 reductase activity","type":"related"},{"name":"ubiquinol:ferricytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone--cytochrome-c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c oxidoreductase activity","type":"related"},{"name":"ubiquinone-cytochrome c reductase activity","type":"related"}],"termid":"GO:0008121","terms_by_termid":{"GO:0008121":null}}


id: PBO:0072763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A14","termid":"PBO:0072763"}


id: GO:0070545
data:
  {"annotated_genes":["SJAG_02759","SJAG_00882","SJAG_02830"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73374,74374,75328],"is_not":false,"summary":null,"term":"GO:0070545"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in coordinating ribosome biogenesis with cell cycle progression. In human, it is composed of Pes1, Bop1, and WDR12; in Saccharomyces the proteins are known as Nop7p, Erb1 and Ytm1 respectively.","definition_xrefs":["PMID:17353269","PMID:16043514","GOC:mah","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00882":null,"SJAG_02759":null,"SJAG_02830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0030684","GO:0032991","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"PeBoW complex","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0070545","terms_by_termid":{"GO:0070545":null}}


id: PATO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000204 absolute locomotor_activity (obsolete PATO:0000204)","termid":"PATO:0000204"}


id: PBO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP2 antisense RNA 1","termid":"PBO:0051991"}


id: PBO:0049617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 20","termid":"PBO:0049617"}


id: PBO:0028951
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology_during_recovery_from_stationary_phase","termid":"PBO:0028951"}


id: PR:Q9URZ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.09 gene.","definition_xrefs":["UniProtKB:Q9URZ2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0654 protein C869.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.09","synonyms":[{"name":"Spom972h-SPAC869.09","type":"exact"}],"termid":"PR:Q9URZ2"}


id: PBO:0029173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_peptide-glutamate-N-acetyltransferase_activity","termid":"PBO:0029173"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03802","SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111286,111615,113278],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["GOC:PARL","PMID:24709372","PMID:23010169","GOC:dph","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"},{"relation_name":"is_a","term_name":"calmodulin dependent kinase signaling pathway","termid":"GO:0099004"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: PBO:0069811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1097, pseudogene","termid":"PBO:0069811"}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:18688235","PubMed:15609361"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: PBO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs20 (predicted)","termid":"PBO:0003763"}


id: PBO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof11","termid":"PBO:0002502"}


id: SO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A translocation where the regions involved are from the same chromosome.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal_translocation","termid":"SO:0002061"}


id: PBO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Faf1 (predicted)","termid":"PBO:0001760"}


id: GO:0046126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside biosynthetic process","termid":"GO:0046120"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine deoxyribonucleoside biosynthetic process","synonyms":[{"name":"pyrimidine deoxyribonucleoside anabolism","type":"exact"},{"name":"pyrimidine deoxyribonucleoside biosynthesis","type":"exact"},{"name":"pyrimidine deoxyribonucleoside formation","type":"exact"},{"name":"pyrimidine deoxyribonucleoside synthesis","type":"exact"}],"termid":"GO:0046126"}


id: GO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis by symbiont of host cells (obsolete GO:0001900)","synonyms":[{"name":"activation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"positive regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"stimulation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"up regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"up-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"upregulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001900"}


id: PBO:0053464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 426","termid":"PBO:0053464"}


id: GO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an immature B cell.","definition_xrefs":["ISBN:0781735149","PMID:16551251","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immature B cell differentiation","synonyms":[{"name":"immature B cell development","type":"related"},{"name":"immature B lymphocyte differentiation","type":"exact"},{"name":"immature B-cell differentiation","type":"exact"},{"name":"immature B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002327"}


id: PBO:0080330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 94 pseudogene","termid":"PBO:0080330"}


id: GO:0034572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monodemethylisoproturon + H2O = didemethylisoproturon + formaldehyde + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"monodemethylisoproturon dimethylaminedehydrogenase activity","secondary_identifiers":["EC:1.5.99.-"],"termid":"GO:0034572"}


id: PBO:0089456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH/VHS domain protein Ent3","termid":"PBO:0089456"}


id: PBO:0089923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein","termid":"PBO:0089923"}


id: GO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the rate of proteolysis catalyzed by a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity involved in apoptotic process","termid":"GO:0016505"},{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-449073","Reactome:R-HSA-205117"],"synonyms":[{"name":"caspase activator activity","type":"broad"}],"termid":"GO:0008656"}


id: GO:0102955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-demethylmenaquinol-7 + S-adenosyl-L-methionine = menaquinol-7 + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:9045837","GOC:pz","PMID:1444716","RHEA:33255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9191","EC:2.1.1.163"],"termid":"GO:0102955"}


id: PATO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001036 relative life span (obsolete PATO:0001036)","termid":"PATO:0001036"}


id: GO:0061385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fibroblasts, resulting in the expansion of a fibroblast population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"},{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast proliferation involved in heart morphogenesis","termid":"GO:0061385"}


id: PBO:0044300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 type A pseudogene 3","termid":"PBO:0044300"}


id: PBO:0089919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit Kei1","termid":"PBO:0089919"}


id: FYPO:0004766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or both of the normal nucleation sites does not occur during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:15772152","GO:0051415","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic interphase microtubule nucleation","termid":"FYPO:0000234"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished cytoplasmic interphase microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation during mitotic cell cycle","type":"exact"},{"name":"abolished cytoplasmic interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"abolished interphase microtubule nucleation","type":"exact"},{"name":"cytoplasmic microtubule nucleation during mitotic interphase abolished","type":"exact"}],"termid":"FYPO:0004766"}


id: GO:0022403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell cycle phase","termid":"GO:0022403"}


id: PBO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isthmin 1","termid":"PBO:0051873"}


id: GO:0050994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of lipid catabolic process","synonyms":[{"name":"regulation of lipid breakdown","type":"exact"},{"name":"regulation of lipid catabolism","type":"exact"},{"name":"regulation of lipid degradation","type":"exact"}],"termid":"GO:0050994"}


id: MOD:01911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one chlorine atom.","definition_xrefs":["Unimod:936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated residue","synonyms":[{"name":"Cl1Res","type":"exact"}],"termid":"MOD:01911"}


id: GO:0030460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear translocation of MAPK (mating sensu Fungi) (obsolete GO:0030460)","synonyms":[{"name":"nuclear translocation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030460"}


id: GO:0098697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ryanodine-sensitive calcium-release channel activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ryanodine-sensitive calcium-release channel activity","termid":"GO:0005219"},{"relation_name":"is_a","term_name":"calcium-induced calcium release activity involved in regulation of postsynaptic cytosolic calcium ion concentration","termid":"GO:1905058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ryanodine-sensitive calcium-release channel activity involved in regulation of postsynaptic cytosolic calcium levels","termid":"GO:0098697"}


id: PBO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug165","termid":"PBO:0016922"}


id: PBO:0087565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in recombination, DNA repair, and joint molecule formation/resolution during meiotic recombination; phosphorylation of the non-catalytic subunit Mms4p by Cdc28p and Cdc5p during mitotic cell cycle activates the function of Mms4p-Mus81p","termid":"PBO:0087565"}


id: GO:1904479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GOC:rl","PMID:12469120","GOC:TermGenie","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"negatively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal absorption","synonyms":[{"name":"down regulation of intestinal absorption","type":"exact"},{"name":"down-regulation of intestinal absorption","type":"exact"},{"name":"downregulation of intestinal absorption","type":"exact"},{"name":"inhibition of intestinal absorption","type":"narrow"}],"termid":"GO:1904479"}


id: PBO:0056953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 18a","termid":"PBO:0056953"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: GO:2000614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"positively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"positive regulation of TSH secretion","type":"exact"},{"name":"positive regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000614"}


id: PBO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 11","termid":"PBO:0042427"}


id: GO:0098583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vocalization behavior that is the result of learning.","definition_xrefs":["GOC:BHF","GOC:dos","PMID:17035521","GOC:rl","PMID:16418265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vocalization behavior","termid":"GO:0071625"},{"relation_name":"is_a","term_name":"learned vocalization behavior or vocal learning","termid":"GO:0098598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"learned vocalization behavior","termid":"GO:0098583"}


id: GO:0052653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3',5'-cyclic diguanylic acid, a cyclic purine dinucleotide in which the base groups are guanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"3',5'-cyclic diguanylic acid metabolic process","synonyms":[{"name":"3',5'-cyclic diguanylic acid metabolism","type":"exact"},{"name":"cdiGMP metabolic process","type":"exact"},{"name":"cdiGMP metabolism","type":"exact"},{"name":"cyclic diguanylate metabolic process","type":"exact"},{"name":"cyclic diguanylate metabolism","type":"exact"}],"termid":"GO:0052653"}


id: GO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + S-adenosyl-L-methionine + reduced acceptor = 2-iminoacetate + 4-methylphenol + 5'-deoxyadenosine + L-methionine + acceptor + 2 H+.","definition_xrefs":["MetaCyc:RXN-11319","EC:4.1.99.19","GOC:crds","PMID:17403671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-iminoacetate synthase activity","secondary_identifiers":["RHEA:26361"],"termid":"GO:0036355"}


id: PR:Q9UUC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.13c","synonyms":[{"name":"Spom972h-ctu2","type":"exact"}],"termid":"PR:Q9UUC7"}


id: PBO:0064081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide interacting regulator of transient receptor potential channels","termid":"PBO:0064081"}


id: MOD:01070
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a pentafluorophenyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafluorophenyl modified residue","synonyms":[{"name":"Pfp","type":"exact"}],"termid":"MOD:01070"}


id: GO:0102552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [glycine-cleavage complex H protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + a [glycine-cleavage complex H protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz","EC:2.8.1.8"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on glycine-cleavage complex H protein (obsolete GO:0102552)","termid":"GO:0102552"}


id: PBO:0041184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin like 8","termid":"PBO:0041184"}


id: GO:0003247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of a cardiac muscle cell during the postembryonic period that contributes to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"cardiac muscle tissue growth involved in heart morphogenesis","termid":"GO:0003245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic cardiac muscle cell growth involved in heart morphogenesis","termid":"GO:0003247"}


id: PR:Q9Y7Q0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.06","synonyms":[{"name":"Spom972h-SPCC191.06","type":"exact"}],"termid":"PR:Q9Y7Q0"}


id: PBO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 38","termid":"PBO:0070667"}


id: GO:0070637
data:
  {"annotated_genes":["SJAG_04693","SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[108306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[70217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"pyridine nucleoside metabolism","type":"exact"}],"termid":"GO:0070637","terms_by_termid":{"GO:0046495":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0075480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily B member 1, pseudogene","termid":"PBO:0075480"}


id: PR:P50524
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpn12 gene.","definition_xrefs":["UniProtKB:P50524","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.01","synonyms":[{"name":"Spom972h-rpn12","type":"exact"}],"termid":"PR:P50524"}


id: GO:0061798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP=(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GTP 3',8'-cyclase activity","secondary_identifiers":["EC:4.1.99.22","RHEA:49576","MetaCyc:RXN-8340"],"termid":"GO:0061798"}


id: PBO:0069788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1074, pseudogene","termid":"PBO:0069788"}


id: PBO:0109188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0109188"}


id: PBO:0074805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13J","termid":"PBO:0074805"}


id: GO:0070859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"regulation of bile acid biosynthetic process","termid":"GO:0070857"},{"relation_name":"is_a","term_name":"positive regulation of bile acid metabolic process","termid":"GO:1904253"},{"relation_name":"positively_regulates","term_name":"bile acid biosynthetic process","termid":"GO:0006699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of bile acid biosynthetic process","synonyms":[{"name":"activation of bile acid biosynthetic process","type":"narrow"},{"name":"positive regulation of bile acid anabolism","type":"exact"},{"name":"positive regulation of bile acid biosynthesis","type":"exact"},{"name":"positive regulation of bile acid formation","type":"exact"},{"name":"positive regulation of bile acid synthesis","type":"exact"},{"name":"stimulation of bile acid biosynthetic process","type":"narrow"},{"name":"up regulation of bile acid biosynthetic process","type":"exact"},{"name":"up-regulation of bile acid biosynthetic process","type":"exact"},{"name":"upregulation of bile acid biosynthetic process","type":"exact"}],"termid":"GO:0070859"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: GO:0034404
data:
  {"annotated_genes":["SJAG_00134","SJAG_02179","SJAG_03881","SJAG_06634","SJAG_05029","SJAG_04264","SJAG_01859","SJAG_03096","SJAG_00694","SJAG_00044","SJAG_01781","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[111962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[70216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[70217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[94099,94098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[89144,85474,89358,73211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[93267,109025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase-containing small molecule: a nucleobase, a nucleoside, or a nucleotide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound biosynthetic process","termid":"GO:0034654"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule metabolic process","termid":"GO:0055086"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleobase-containing small molecule biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"nucleobase, nucleoside and nucleotide anabolism","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide biosynthesis","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide formation","type":"exact"},{"name":"nucleobase, nucleoside and nucleotide synthesis","type":"exact"}],"termid":"GO:0034404","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0075096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 145","termid":"PBO:0075096"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: FYPO:0005408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the mitotic cell cycle is shorter than normal during a cellular response to methyl methanesulfonate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of mitotic S phase","termid":"FYPO:0000615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased duration of S phase during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to MMS","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic S phase during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced duration of mitotic S phase during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005408"}


id: PBO:0004183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1 guanyl-nucleotide exchange factor Efc25","termid":"PBO:0004183"}


id: GO:0016871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = cycloartenol.","definition_xrefs":["RHEA:21308","EC:5.4.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cycloartenol synthase activity","secondary_identifiers":["KEGG_REACTION:R03200","MetaCyc:CYCLOARTENOL-SYNTHASE-RXN"],"synonyms":[{"name":"(S)-2,3-epoxysqualene mutase (cyclizing, cycloartenol-forming)","type":"related"},{"name":"2,3-epoxysqualene cycloartenol-cyclase activity","type":"related"},{"name":"2,3-epoxysqualene--cycloartenol cyclase activity","type":"related"},{"name":"2,3-oxidosqualene-cycloartenol cyclase activity","type":"related"},{"name":"oxidosqualene:cycloartenol cyclase activity","type":"exact"},{"name":"squalene-2,3-epoxide-cycloartenol cyclase activity","type":"related"}],"termid":"GO:0016871"}


id: GO:0061841
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which transports ferrous iron (Fe(III) or Fe3+) ions from the vacuole, the main storage component of intracellular free iron, into the cytoplasm in a low iron environment.","definition_xrefs":["GOC:bhm","PMID:9413439","PMID:10608875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"ferroxidase complex","termid":"GO:1905862"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"high-affinity iron exporter complex","synonyms":[{"name":"FET5-FTH1 high affinity iron exporter complex","type":"narrow"},{"name":"FET5-FTH1 high-affinity iron exporter complex","type":"narrow"},{"name":"high affinity iron exporter complex","type":"exact"}],"termid":"GO:0061841"}


id: PBO:0075869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 9","termid":"PBO:0075869"}


id: PBO:0065955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component like 1","termid":"PBO:0065955"}


id: PBO:0041728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II gamma","termid":"PBO:0041728"}


id: PATO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's possessing or displaying a distinctive feature in type or degree or effect or force.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intensity","termid":"PATO:0000049"}


id: PBO:0070275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 15","termid":"PBO:0070275"}


id: PBO:0028346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028346"}


id: PR:Q9P7I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmk1 gene.","definition_xrefs":["UniProtKB:Q9P7I2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase type I (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK12.02c","synonyms":[{"name":"CaMK-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cmk1","type":"exact"}],"termid":"PR:Q9P7I2"}


id: PR:O14082
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.17 gene.","definition_xrefs":["UniProtKB:O14082","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein UNK4.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.17","synonyms":[{"name":"Spom972h-SPACUNK4.17","type":"exact"}],"termid":"PR:O14082"}


id: PBO:0042546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11A","termid":"PBO:0042546"}


id: PBO:0028392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glyoxalase_III_activity","termid":"PBO:0028392"}


id: PBO:0044024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 3","termid":"PBO:0044024"}


id: PBO:0065617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A3","termid":"PBO:0065617"}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: GO:1904090
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of peptidase inhibitor activity.","definition_xrefs":["GOC:TermGenie","PMID:20860624","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"peptidase inhibitor complex","synonyms":[{"name":"Cathepsin-B - cystatin-A complex","type":"narrow"}],"termid":"GO:1904090"}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: PBO:0044606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12","termid":"PBO:0044606"}


id: PBO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 2","termid":"PBO:0050431"}


id: PBO:0044211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin V","termid":"PBO:0044211"}


id: PBO:0090442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap104","termid":"PBO:0090442"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: PBO:0079076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-4","termid":"PBO:0079076"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","PMID:24939851","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: PBO:0000066
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric duplication","termid":"PBO:0000066"}


id: GO:1902687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of glucosidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","GOC:bhm","PMID:23826932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucosidase complex","termid":"GO:1902687"}


id: PBO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 47","termid":"PBO:0071441"}


id: FYPO:0007385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a longer time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:28366743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased duration of protein-protein interaction","synonyms":[{"name":"increased duration of protein binding","type":"exact"}],"termid":"FYPO:0007385"}


id: PBO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2","termid":"PBO:0039613"}


id: PBO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1 (predicted)","termid":"PBO:0018290"}


id: FYPO:0003379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abolished meiosis II","synonyms":[{"name":"abolished second meiotic nuclear division","type":"exact"},{"name":"absent meiosis II","type":"exact"},{"name":"meiosis II abolished","type":"exact"},{"name":"meiosis II: absent","type":"exact"}],"termid":"FYPO:0003379"}


id: PBO:0039928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 33","termid":"PBO:0039928"}


id: FYPO:0004408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing triplatin tetranitrate (also called BBR 3464).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on triplatin tetranitrate","synonyms":[{"name":"normal cell population growth in presence of triplatin tetranitrate","type":"exact"},{"name":"normal cell population growth on BBR 3464","type":"exact"},{"name":"normal cell population growth on triplatin tetranitrate","type":"exact"},{"name":"normal cellular response to triplatin tetranitrate","type":"related"},{"name":"normal vegetative cell population growth on triplatin tetranitrate","type":"exact"}],"termid":"FYPO:0004408"}


id: GO:0003978
data:
  {"annotated_genes":["SJAG_01784","SJAG_03818","SJAG_02951"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70799,72618,73477],"is_not":false,"summary":null,"term":"GO:0003978"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose = UDP-galactose.","definition_xrefs":["EC:5.1.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucose 4-epimerase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:UDPGLUCEPIM-RXN","Reactome:R-HSA-5610036","Reactome:R-HSA-70369","RHEA:22168"],"synonyms":[{"name":"4-epimerase activity","type":"related"},{"name":"UDP-D-galactose 4-epimerase activity","type":"related"},{"name":"UDP-galactose 4-epimerase activity","type":"related"},{"name":"UDP-glucose epimerase activity","type":"related"},{"name":"UDPG-4-epimerase activity","type":"related"},{"name":"UDPgalactose 4-epimerase activity","type":"related"},{"name":"UDPglucose 4-epimerase activity","type":"related"},{"name":"galactowaldenase activity","type":"related"},{"name":"uridine diphosphate galactose 4-epimerase activity","type":"related"},{"name":"uridine diphosphate glucose 4-epimerase activity","type":"related"},{"name":"uridine diphospho-galactose-4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose 4-epimerase activity","type":"related"},{"name":"uridine diphosphoglucose epimerase activity","type":"related"}],"termid":"GO:0003978","terms_by_termid":{"GO:0003978":null}}


id: GO:0012510
data:
  {"annotated_genes":["SJAG_02282","SJAG_04565","SJAG_04609","SJAG_00379","SJAG_04517","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76528,108211,96595,107998],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[90465,108117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vesicle transporting substances between the trans-Golgi network and other parts of the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"Golgi-associated vesicle membrane","termid":"GO:0030660"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"TGN transport vesicle membrane","type":"exact"},{"name":"trans-Golgi network constitutive secretory pathway transport vesicle membrane","type":"exact"}],"termid":"GO:0012510","terms_by_termid":{"GO:0030121":null,"GO:0030130":null}}


id: GO:0099589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine serotonin and transmitting a signal across a membrane by activating some effector activity. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"serotonin receptor activity","termid":"GO:0099589"}


id: FYPO:0000745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch internalization begins later than normal. Actin cortical patch internalization is the process in which the patch moves from the cell surface to the inside of the cell.","definition_xrefs":["PMID:21620704","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch internalization","termid":"FYPO:0000743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0004803","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of actin cortical patch internalization","synonyms":[{"name":"delayed actin cortical patch internalization","type":"exact"},{"name":"delayed onset of F-actin patch internalization","type":"exact"},{"name":"delayed onset of abnormal actin cortical patch internalization during vegetative growth","type":"exact"},{"name":"delayed onset of actin cortical patch internalisation","type":"exact"},{"name":"delayed onset of actin cortical patch internalization during mitotic cell cycle","type":"related"},{"name":"delayed onset of actin patch internalization","type":"exact"}],"termid":"FYPO:0000745"}


id: PBO:0073168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted and transmembrane 1","termid":"PBO:0073168"}


id: GO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"}


id: GO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining subsequent sites of bud emergence such that budding takes place at alternating poles of a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0007163","GO:0000281"],"is_obsolete":false,"name":"bipolar cellular bud site selection","synonyms":[{"name":"bipolar bud site selection","type":"exact"},{"name":"bipolar budding","type":"broad"},{"name":"polar budding","type":"broad"}],"termid":"GO:0007121"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: PBO:0088254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin Phb1","termid":"PBO:0088254"}


id: PBO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge","termid":"PBO:0001394"}


id: GO:0046043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving TDP, ribosylthymine diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"TDP metabolic process","synonyms":[{"name":"TDP metabolism","type":"exact"}],"termid":"GO:0046043"}


id: FYPO:0003668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caffeine than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to caffeine","termid":"FYPO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to caffeine during cellular response to hydroxyurea","synonyms":[{"name":"resistance to caffeine during cellular response to HU","type":"exact"},{"name":"resistance to caffeine during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to caffeine during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to caffeine during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0003668"}


id: GO:0031142
data:
  {"annotated_genes":["SJAG_00781"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110722],"is_not":false,"summary":null,"term":"GO:0031142"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion upon nitrogen starvation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen starvation","termid":"GO:0006995"},{"relation_name":"is_a","term_name":"induction of conjugation upon nutrient starvation","termid":"GO:0031140"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"induction of conjugation upon nitrogen starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031142","terms_by_termid":{"GO:0031142":null}}


id: PR:O13757
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein C17A2.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.07c","synonyms":[{"name":"Spom972h-SPAC17A2.07c","type":"exact"}],"termid":"PR:O13757"}


id: PBO:0088593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1","termid":"PBO:0088593"}


id: GO:0004822
data:
  {"annotated_genes":["SJAG_04285","SJAG_03545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71654,74654],"is_not":false,"summary":null,"term":"GO:0004822"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-isoleucine + ATP + tRNA(Ile) = L-isoleucyl-tRNA(Ile) + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:6.1.1.5","RHEA:11060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03545":null,"SJAG_04285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"isoleucine-tRNA ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-380176","MetaCyc:ISOLEUCINE--TRNA-LIGASE-RXN","Reactome:R-HSA-379893","KEGG_REACTION:R03656"],"synonyms":[{"name":"L-isoleucine:tRNAIle ligase (AMP-forming)","type":"related"},{"name":"isoleucine translase activity","type":"related"},{"name":"isoleucine-tRNA synthetase activity","type":"related"},{"name":"isoleucine-transfer RNA ligase activity","type":"related"},{"name":"isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"isoleucyl-transfer RNA synthetase activity","type":"related"},{"name":"isoleucyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004822","terms_by_termid":{"GO:0004822":null}}


id: GO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving amyloid-beta, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta metabolic process","synonyms":[{"name":"amyloid-beta metabolism","type":"exact"},{"name":"beta-amyloid metabolic process","type":"exact"},{"name":"beta-amyloid metabolism","type":"exact"}],"termid":"GO:0050435"}


id: PBO:0055713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM and cysteine rich domains 1","termid":"PBO:0055713"}


id: PBO:0080834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-tRNA synthetase 2","termid":"PBO:0080834"}


id: PBO:0056945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10a","termid":"PBO:0056945"}


id: FYPO:0007550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to hydroxyurea.","definition_xrefs":["PMID:19158664","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to hydroxyurea","synonyms":[{"name":"increased number of Rad22 foci during cellular response to hydroxyurea","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to HU","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007550"}


id: GO:0060546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of necroptotic process","termid":"GO:0060544"},{"relation_name":"is_a","term_name":"negative regulation of programmed necrotic cell death","termid":"GO:0062099"},{"relation_name":"negatively_regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of necroptotic process","synonyms":[{"name":"negative regulation of necroptosis","type":"narrow"}],"termid":"GO:0060546"}


id: GO:0008275
data:
  {"annotated_genes":["SJAG_07018","SJAG_03835","SJAG_02609","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96449,104153,104898,105848],"is_not":false,"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A complex usually comprising two gamma-tubulin molecules and two conserved non-tubulin proteins. Some gamma-tubulin small complexes are thought to be the repeating unit making up the core of the gamma-tubulin ring complex.","definition_xrefs":["PMID:12134075","PMID:11297925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-tubulin complex","termid":"GO:0000930"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01215":null,"SJAG_02609":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"gamma-tubulin small complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061495","GO:0000927","GO:0000928"],"synonyms":[{"name":"Tub4 complex","type":"narrow"},{"name":"gamma-tubulin small complex, centrosomal","type":"narrow"},{"name":"gamma-tubulin small complex, mitotic spindle pole body","type":"narrow"},{"name":"gamma-tubulin small complex, spindle pole body","type":"narrow"},{"name":"gammaTuSC","type":"exact"}],"termid":"GO:0008275","terms_by_termid":{"GO:0008275":null}}


id: PBO:0050557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HRas proto-oncogene, GTPase","termid":"PBO:0050557"}


id: PBO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0035821"}


id: PBO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1","termid":"PBO:0047730"}


id: GO:0031311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of contractile vacuolar membrane (obsolete GO:0031311)","synonyms":[{"name":"intrinsic to contractile vacuolar membrane","type":"narrow"}],"termid":"GO:0031311"}


id: GO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-[(R)-3-hydroxybutanoyloxy]butanoate + H2O = 2 (R)-3-hydroxybutanoate + H+.","definition_xrefs":["RHEA:10172","EC:3.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydroxybutyrate-dimer hydrolase activity","secondary_identifiers":["MetaCyc:HYDROXYBUTYRATE-DIMER-HYDROLASE-RXN","KEGG_REACTION:R00048"],"synonyms":[{"name":"(R)-3-((R)-3-hydroxybutanoyloxy)butanoate hydroxybutanoylhydrolase activity","type":"related"},{"name":"D-(-)-3-hydroxybutyrate-dimer hydrolase activity","type":"related"}],"termid":"GO:0047989"}


id: GO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo orientation (obsolete GO:0000284)","synonyms":[{"name":"shmoo orientation","type":"exact"}],"termid":"GO:0000284"}


id: GO:0044114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an organism from an initial condition to a later condition, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of symbiont in host","secondary_identifiers":["GO:0044124","GO:0044122"],"synonyms":[{"name":"development of symbiont in host intercellular space","type":"narrow"},{"name":"development of symbiont in host vascular tissue","type":"narrow"}],"termid":"GO:0044114"}


id: PBO:0043882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular repressor of E1A stimulated genes 1","termid":"PBO:0043882"}


id: PBO:0031094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sterile","termid":"PBO:0031094"}


id: PBO:0053057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARS2 antisense RNA 1","termid":"PBO:0053057"}


id: GO:0031570
data:
  {"annotated_genes":["SJAG_05373","SJAG_00640","SJAG_03898","SJAG_03048","SJAG_01010","SJAG_01044","SJAG_01680","SJAG_02563","SJAG_02771","SJAG_00429","SJAG_03927","SJAG_04287","SJAG_02576","SJAG_04280","SJAG_01708","SJAG_04671","SJAG_00327","SJAG_01855","SJAG_04140","SJAG_03026","SJAG_00486","SJAG_00364","SJAG_01605","SJAG_01873","SJAG_03942","SJAG_04332","SJAG_02026","SJAG_01205","SJAG_02074","SJAG_01677","SJAG_01076","SJAG_02266","SJAG_00623","SJAG_02098","SJAG_00169","SJAG_03160","SJAG_03720","SJAG_01084","SJAG_01429","SJAG_03695","SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[87069,111202,101975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[106447,89169,78775,109654,111146,111376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[87070,71971,77711,112371,78058,89563,112212,101978,107277,74459,71237,94854,96003,111927,111204,94694,104621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[104968,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[112130,112795,78075,96004,85908,96520,106971,94855,101979,74647,104622,87425,71973,87071,84843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[87072,107279,86126,84887,94856,84844,94695,77891,90130,91575,103018,96326,97795,111206,77710,73881,78073,106972,101980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and progresses through signal transduction and ends with cell cycle effector processes.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0072401"],"synonyms":[{"name":"DNA integrity checkpoint","type":"exact"},{"name":"signal transduction involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0031570","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0033314":null,"GO:0033315":null,"GO:0044773":null,"GO:0044778":null}}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: GO:0070640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin D3 metabolic process","synonyms":[{"name":"calciol metabolic process","type":"exact"},{"name":"cholecalciferol metabolic process","type":"exact"},{"name":"vitamin D3 metabolism","type":"exact"}],"termid":"GO:0070640"}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: GO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the covalent alteration of one or more amino acid or lipid residues occurring in a lipoprotein, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein modification","termid":"GO:0042160"}


id: PATO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000714 latency value (obsolete PATO:0000714)","termid":"PATO:0000714"}


id: PBO:0079590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 2","termid":"PBO:0079590"}


id: PBO:0027115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_shmoo_tip","termid":"PBO:0027115"}


id: PBO:0091509
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3855791delG","termid":"PBO:0091509"}


id: PBO:0027100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rDNA_antisense_small_RNA_level","termid":"PBO:0027100"}


id: PBO:0084019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylated integral membrane protein localized to plasma membrane; plays a role in fructose-1,6-bisphosphatase (FBPase) degradation; involved in FBPase transport from the cytosol to Vid (vacuole import and degradation) vesicles; VID22 has a paralog, ENV11, that arose from the whole genome duplication","termid":"PBO:0084019"}


id: PBO:0080484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 3B","termid":"PBO:0080484"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: FYPO:0004402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to JM216 (also called satraplatin). Cells stop growing (and may die) at a concentration of JM216 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to JM216","synonyms":[{"name":"hypersensitive to JM216","type":"exact"},{"name":"sensitive to JM216 during mitotic cell cycle","type":"related"},{"name":"sensitive to JM216 during vegetative growth","type":"exact"},{"name":"sensitive to satraplatin","type":"exact"}],"termid":"FYPO:0004402"}


