# terms

id: PBO:0057674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1265","termid":"PBO:0057674"}


id: FYPO:0006419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for longer than normal during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Rad51 focus presence during meiotic cell cycle","synonyms":[{"name":"prolonged Rad51 focus presence during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006419"}


id: PBO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta small subunit Cdc1","termid":"PBO:0002321"}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: PBO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulator Est1","termid":"PBO:0004294"}


id: PBO:0065627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 5","termid":"PBO:0065627"}


id: GO:0051190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"prosthetic group metabolic process","termid":"GO:0051189"},{"relation_name":"part_of","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"prosthetic group catabolic process","synonyms":[{"name":"coenzyme and prosthetic group catabolic process","type":"broad"},{"name":"coenzyme and prosthetic group catabolism","type":"broad"},{"name":"prosthetic group breakdown","type":"exact"},{"name":"prosthetic group catabolism","type":"exact"},{"name":"prosthetic group degradation","type":"exact"}],"termid":"GO:0051190"}


id: GO:0050108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monoterpenyl diphosphate + H2O = monoterpenol + diphosphate.","definition_xrefs":["MetaCyc:MONOTERPENYL-PYROPHOSPHATASE-RXN","EC:3.1.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoric monoester hydrolase activity","termid":"GO:0016794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"monoterpenyl-diphosphatase activity","synonyms":[{"name":"bornyl diphosphate hydrolase activity","type":"related"},{"name":"bornyl pyrophosphate hydrolase activity","type":"related"},{"name":"monoterpenyl-diphosphate diphosphohydrolase activity","type":"related"},{"name":"monoterpenyl-pyrophosphatase activity","type":"exact"}],"termid":"GO:0050108"}


id: GO:0030809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide biosynthetic process","termid":"GO:0030808"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide biosynthetic process","synonyms":[{"name":"down regulation of nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of nucleotide biosynthetic process","type":"exact"},{"name":"inhibition of nucleotide biosynthetic process","type":"narrow"},{"name":"negative regulation of nucleotide anabolism","type":"exact"},{"name":"negative regulation of nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of nucleotide formation","type":"exact"},{"name":"negative regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030809"}


id: GO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the metanephric S-shaped body is generated and organized. The metanephric S-shaped body is the successor of the metanephric comma-shaped body that contributes to the morphogenesis of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-shaped body morphogenesis","termid":"GO:0072050"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}


id: SO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA_primary_transcript","synonyms":[{"name":"rRNA primary transcript","type":"exact"},{"name":"ribosomal RNA primary transcript","type":"exact"}],"termid":"SO:0000209"}


id: GO:0099191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by brain-derived neurotrophic factor (BDNF) crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by BDNF","synonyms":[{"name":"trans-synaptic signaling by brain-derived neurotrophic factor","type":"exact"}],"termid":"GO:0099191"}


id: PBO:0003954
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.18","termid":"PBO:0003954"}


id: PR:O74312
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg9 gene.","definition_xrefs":["UniProtKB:O74312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.07c","synonyms":[{"name":"Spom972h-atg9","type":"exact"}],"termid":"PR:O74312"}


id: GO:0055046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation as the microspore to the mature structure.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"pollen development","termid":"GO:0009555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microgametogenesis","secondary_identifiers":["Wikipedia:Microgametogenesis"],"synonyms":[{"name":"pollen development from the microspore","type":"exact"}],"termid":"GO:0055046"}


id: PBO:0027424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027424"}


id: FYPO:0004072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during a cellular response to a pheromone. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to pheromone","termid":"FYPO:0003426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to pheromone","synonyms":[{"name":"transcripts absent from cell during cellular response to pheromone","type":"exact"},{"name":"undetectable RNA level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0004072"}


id: PBO:0076219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite oxidase","termid":"PBO:0076219"}


id: MOD:00896
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a riboflavin phosphate (flavin mononucleotide, FMN) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN modified residue","termid":"MOD:00896"}


id: PBO:0038500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 9","termid":"PBO:0038500"}


id: GO:0042848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbose metabolic process","termid":"GO:0019311"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"sorbose catabolic process","synonyms":[{"name":"sorbose breakdown","type":"exact"},{"name":"sorbose catabolism","type":"exact"},{"name":"sorbose degradation","type":"exact"}],"termid":"GO:0042848"}


id: PBO:0062389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 10 pseudogene","termid":"PBO:0062389"}


id: PBO:0043328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3 pseudogene 2","termid":"PBO:0043328"}


id: PBO:0074018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 12","termid":"PBO:0074018"}


id: PBO:0031416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell-substrate_adhesion","termid":"PBO:0031416"}


id: PBO:0091845
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product is often automatically annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. However, fission yeast lacks the remaining 40 subunits found in mammals","termid":"PBO:0091845"}


id: PBO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C-Pck2-signaling pathway","termid":"PBO:0001551"}


id: PBO:0029665
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_topoisomerase_type_I_activity","termid":"PBO:0029665"}


id: GO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chitin","termid":"GO:0010200"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chitin","termid":"GO:0071323"}


id: FYPO:0002233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but longer than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable elongated vegetative cell population (obsolete FYPO:0002233)","synonyms":[{"name":"population of viable long cells","type":"exact"},{"name":"viable long vegetative cell population","type":"exact"},{"name":"viable population of elongated vegetative cells","type":"exact"}],"termid":"FYPO:0002233"}


id: PBO:0036119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036119"}


id: GO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that contains an alpha subunit (Runx1, Runx2 or Runx3 in human) that binds DNA and a non-DNA-binding beta subunit (CBFbeta), and binds to a consensus sequence 5'-YGYGGTY-3' found in several enhancers and promoters; the beta subunit enhances the DNA binding of the alpha subunit.","definition_xrefs":["PMID:15156179","PMID:8497254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"core-binding factor complex","synonyms":[{"name":"AML1 complex","type":"narrow"},{"name":"CBF complex","type":"exact"},{"name":"PEPB2 complex","type":"narrow"}],"termid":"GO:0016513"}


id: PBO:0075454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5 like 1","termid":"PBO:0075454"}


id: PBO:0056533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCCC1 antisense RNA 1","termid":"PBO:0056533"}


id: PBO:0079889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine phosphorylase 2","termid":"PBO:0079889"}


id: GO:0098572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the plastid thylakoid membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plastid thylakoid membrane","termid":"GO:0055035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"stromal side of plastid thylakoid membrane","termid":"GO:0098572"}


id: PBO:0080080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 42","termid":"PBO:0080080"}


id: PBO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 4","termid":"PBO:0072671"}


id: GO:0032941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a substance by a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"secretion by tissue","synonyms":[{"name":"expulsion of gland contents","type":"related"},{"name":"tissue secretion","type":"exact"}],"termid":"GO:0032941"}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: PBO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase (predicted)","termid":"PBO:0000128"}


id: GO:1900085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein autophosphorylation","termid":"GO:0031953"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine autophosphorylation","termid":"GO:1900084"},{"relation_name":"negatively_regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"down regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"down regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"down regulation of tyrosine autophosphorylation","type":"exact"},{"name":"down-regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"down-regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"down-regulation of tyrosine autophosphorylation","type":"exact"},{"name":"downregulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"downregulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"downregulation of tyrosine autophosphorylation","type":"exact"},{"name":"inhibition of peptidyl-tyrosine autophosphorylation","type":"narrow"},{"name":"inhibition of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"inhibition of tyrosine autophosphorylation","type":"narrow"},{"name":"negative regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"negative regulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900085"}


id: GO:0031763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"galanin receptor binding","synonyms":[{"name":"galanin receptor ligand","type":"narrow"}],"termid":"GO:0031763"}


id: PBO:0073797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 4","termid":"PBO:0073797"}


id: PBO:0004389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L29","termid":"PBO:0004389"}


id: PR:O13960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecm33 gene.","definition_xrefs":["UniProtKB:O13960","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein ecm33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.03c","synonyms":[{"name":"Spom972h-ecm33","type":"exact"}],"termid":"PR:O13960"}


id: GO:0036105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class I peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane in a PEX19-dependent manner.","definition_xrefs":["PMID:14709540","PMID:17020786","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome membrane targeting sequence binding","termid":"GO:0033328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane class-1 targeting sequence binding","synonyms":[{"name":"PEX19-dependent mPTS binding","type":"related"},{"name":"class 1 mPTS binding","type":"exact"}],"termid":"GO:0036105"}


id: PBO:0045375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate mannosyltransferase subunit 1, catalytic","termid":"PBO:0045375"}


id: PBO:0083048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dethiobiotin synthetase; catalyzes the third step in the biotin biosynthesis pathway; BIO4 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria; expression appears to be repressed at low iron levels","termid":"PBO:0083048"}


id: PR:P78798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 2 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01952","PRO:DNx","PANTHER:PTHR22850:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal 2 receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.01","secondary_identifiers":["UniProtKB:P78798"],"synonyms":[{"name":"PTS2 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PEX7","type":"exact"},{"name":"peroxin-7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78798"}


id: PBO:0084216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homo-isocitrate dehydrogenase; an NAD-linked mitochondrial enzyme required for the fourth step in the biosynthesis of lysine, in which homo-isocitrate is oxidatively decarboxylated to alpha-ketoadipate","termid":"PBO:0084216"}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: PBO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophosphate N-acetylneuraminic acid synthetase","termid":"PBO:0043392"}


id: PBO:0079217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 2","termid":"PBO:0079217"}


id: PBO:0018089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad9 homolog Crb2","termid":"PBO:0018089"}


id: GO:0002654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"activation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"positive regulation of immune response-dependent tolerance induction","type":"exact"},{"name":"stimulation of tolerance induction dependent upon immune response","type":"narrow"},{"name":"up regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"up-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"upregulation of tolerance induction dependent upon immune response","type":"exact"}],"termid":"GO:0002654"}


id: PBO:0038298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_sequence","termid":"PBO:0038298"}


id: GO:0017011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycoerythrobilin to phycoerythrins.","definition_xrefs":["RESID:AA0259","RESID:AA0132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycoerythrobilin linkage","termid":"GO:0017011"}


id: GO:0035191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise asymmetric spreading out of nuclei internally along the anterior-posterior axis of the developing insect embryo during mitotic cycles 4 to 6. This movement leads to the distribution of nuclei in a hollow ellipsoid underlying the cortex.","definition_xrefs":["PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytial nuclear migration","termid":"GO:0035190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear axial expansion","synonyms":[{"name":"nuclear distribution along anterior-posterior axis","type":"exact"},{"name":"nucleus distribution along anterior-posterior axis","type":"exact"}],"termid":"GO:0035191"}


id: PBO:0080890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F1","termid":"PBO:0080890"}


id: PBO:0028811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028811"}


id: FYPO:0005722
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles and begins to elongate, but becomes curved during anaphase B and eventually collapses. The spindle pole bodies separate, but often become spatially closer together as the spindle elongates and curves.","definition_xrefs":["PMID:15147872","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"mitotic spindle collapse during anaphase B elongation","synonyms":[{"name":"broken mitotic spindle during anaphase B elongation","type":"related"},{"name":"mitotic spindle breakage during anaphase B elongation","type":"exact"},{"name":"mitotic spindle collapse during elongation during anaphase B","type":"exact"},{"name":"mitotic spindle curvature and collapse during anaphase B","type":"exact"}],"termid":"FYPO:0005722"}


id: PBO:0089887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein, claudin Dni1","termid":"PBO:0089887"}


id: PBO:0055953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 63","termid":"PBO:0055953"}


id: FYPO:0007449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah","PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localization to ER, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0007449"}


id: GO:0019163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine 5'-phosphate + 2-oxoglutarate = pyridoxal 5'-phosphate + D-glutamate.","definition_xrefs":["EC:2.6.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"pyridoxamine-phosphate transaminase activity","secondary_identifiers":["RHEA:15877","MetaCyc:PYRDAMPTRANS-RXN"],"synonyms":[{"name":"pyridoxamine 5'-phosphate transaminase activity","type":"related"},{"name":"pyridoxamine 5'-phosphate-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"pyridoxamine phosphate aminotransferase activity","type":"related"},{"name":"pyridoxamine-5'-phosphate:2-oxoglutarate aminotransferase (D-glutamate-forming)","type":"related"},{"name":"pyridoxamine-phosphate aminotransferase activity","type":"exact"}],"termid":"GO:0019163"}


id: PBO:0040527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1 pseudogene 1","termid":"PBO:0040527"}


id: PBO:0074408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM11 pseudogene 2","termid":"PBO:0074408"}


id: PBO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family Wdr83 (predicted)","termid":"PBO:0036395"}


id: PBO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal family membrane transporter (predicted)","termid":"PBO:0012315"}


id: GO:0034899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N,N-trimethylamine + NADPH + H+ + O2 = N,N,N-trimethylamine N-oxide + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.148","UM-BBD_reactionID:r1407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimethylamine monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R05623","RHEA:31979"],"termid":"GO:0034899"}


id: PBO:0061589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding transcript regulating alternative splicing","termid":"PBO:0061589"}


id: RO:0002257
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of developmentally induced by","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_succeeded_by","termid":"RO:0002286"},{"relation_name":"is_a","term_name":"has_potential_to_developmentally_induce","termid":"RO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_induces","termid":"RO:0002257"}


id: PATO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An intensity which is characterized by being very severe.","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intensity","termid":"PATO:0000049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profound intensity","termid":"PATO:0002629"}


id: PBO:0050007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction recognition protein","termid":"PBO:0050007"}


id: FYPO:0002414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable swollen vegetative cell","synonyms":[{"name":"inviable enlarged vegetative cell","type":"related"},{"name":"inviable large vegetative cell","type":"related"},{"name":"inviable swollen cell during vegetative growth","type":"exact"},{"name":"inviable swollen vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable vegetative cell with increased cell size","type":"related"},{"name":"inviable vegetative cell with increased cell volume","type":"exact"},{"name":"lethal; swollen vegetative cell","type":"exact"}],"termid":"FYPO:0002414"}


id: PBO:0067273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 351, pseudogene","termid":"PBO:0067273"}


id: GO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a metanephric mesenchymal tissue are generated and organized. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"}


id: PBO:0040721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 immune signaling adaptor","termid":"PBO:0040721"}


id: PBO:0082552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central kinetochore protein and subunit of the Ctf19 complex; mutants have elevated rates of chromosome loss; orthologous to fission yeast kinetochore protein cnl2","termid":"PBO:0082552"}


id: PBO:0083350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene HED1/YDR014W-A","termid":"PBO:0083350"}


id: SO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The string of non-encoded U's at the 3' end of a guide RNA (SO:0000602).","direct_ancestors":[{"relation_name":"adjacent_to","term_name":"guide_RNA","termid":"SO:0000602"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligo_U_tail","synonyms":[{"name":"oligo U tail","type":"exact"}],"termid":"SO:0000609"}


id: FYPO:0000611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested in S phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic S phase","synonyms":[{"name":"abnormal cell cycle arrest in S phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in S phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with incompletely replicated DNA","type":"exact"},{"name":"mitotic cell cycle progression in S phase: arrested","type":"related"}],"termid":"FYPO:0000611"}


id: PBO:0062672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily Z member 3 pseudogene","termid":"PBO:0062672"}


id: PBO:0063982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 16","termid":"PBO:0063982"}


id: PR:Q9P7M1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein dep1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.02c","synonyms":[{"name":"Spom972h-dep1","type":"exact"}],"termid":"PR:Q9P7M1"}


id: PBO:0049517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2AC histone family pseudogene 2","termid":"PBO:0049517"}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: PBO:0069575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 848, pseudogene","termid":"PBO:0069575"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: PBO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase Pho1","termid":"PBO:0004957"}


id: PBO:0066592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member G","termid":"PBO:0066592"}


id: PBO:0058441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5006","termid":"PBO:0058441"}


id: PBO:0080796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 3","termid":"PBO:0080796"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["EC:2.1.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"methylhistidine N-methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine:N-alpha-dimethyl-L-histidine N-alpha-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:alpha-N-dimethyl-L-histidine alpha-N-methyltransferase activity","type":"related"},{"name":"histidine-alpha-N-methyltransferase activity","type":"broad"},{"name":"methylhistidine methyltransferase activity","type":"related"}],"termid":"GO:0052705"}


id: GO:0010901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"regulation of VLDL remodeling","type":"exact"},{"name":"regulation of VLDL remodelling","type":"exact"},{"name":"regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010901"}


id: PBO:0031275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_flocculation","termid":"PBO:0031275"}


id: GO:1901257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"down regulation of M-CSF production","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of M-CSF production","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of M-CSF production","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of M-CSF production","type":"exact"},{"name":"inhibition of macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of M-CSF production","type":"exact"}],"termid":"GO:1901257"}


id: GO:1900055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf senescence.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"leaf senescence","termid":"GO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf senescence","termid":"GO:1900055"}


id: PBO:0080253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 16 pseudogene","termid":"PBO:0080253"}


id: PBO:0059881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 4","termid":"PBO:0059881"}


id: GO:0090114
data:
  {"annotated_genes":["SJAG_03153","SJAG_05344","SJAG_03907","SJAG_00284","SJAG_02539","SJAG_00072","SJAG_03558","SJAG_02349","SJAG_05345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72879],"is_not":false,"summary":null,"term":"GO:0090114"},{"annotations":[91082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[75461,74163,74516,71512,75848,74894,77277],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090110"}]},"cv_name":"biological_process","definition":"The evagination of an endoplasmic reticulum membrane, resulting in formation of a COPII-coated vesicle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"COPII-coated vesicle budding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"COPII vesicle budding","type":"related"},{"name":"ER exit","type":"narrow"},{"name":"ER vesicle budding","type":"broad"}],"termid":"GO:0090114","terms_by_termid":{"GO:0048208":null,"GO:0090110":null,"GO:0090114":null}}


id: PBO:0017931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Mgr2 (predicted)","termid":"PBO:0017931"}


id: PBO:0017865
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli fbp","termid":"PBO:0017865"}


id: PBO:0029583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029583"}


id: GO:0140752
data:
  {"annotated_genes":["SJAG_05285"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110961],"is_not":false,"summary":null,"term":"GO:0140752"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + a branched [(1->3)-beta-D-glucosyl](n+1).","definition_xrefs":["PMID:34959732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,3-beta-D-glucan synthase activity","termid":"GO:0003843"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"branched 1,3-beta-D-glucan synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140752","terms_by_termid":{"GO:0140752":null}}


id: GO:1904491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary transition zone.","definition_xrefs":["PMID:21422230","GO_REF:0000087","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to ciliary transition zone","synonyms":[{"name":"protein localisation in ciliary transition zone","type":"exact"},{"name":"protein localisation to ciliary transition zone","type":"exact"},{"name":"protein localization in ciliary transition zone","type":"exact"}],"termid":"GO:1904491"}


id: GO:0106422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Zeaxanthin + O2 = (3R)-11-cis-3-hydroxyretinal + (3R)-all-trans-3-hydroxyretinal.","definition_xrefs":["PMID:19020100","PMID:19889630","RHEA:33931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid dioxygenase activity","termid":"GO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"carotenoid isomerooxygenase activity","secondary_identifiers":["EC:1.13.11.65"],"termid":"GO:0106422"}


id: GO:0070201
data:
  {"annotated_genes":["SJAG_04312","SJAG_02592","SJAG_04464","SJAG_03453","SJAG_03970","SJAG_00906","SJAG_04509","SJAG_01311","SJAG_01245","SJAG_03048","SJAG_01805","SJAG_04343"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[101176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[71459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[106269,89411,95912,97297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[89961,97819,86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[87643,83664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a protein to a specific location.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of establishment of protein localisation","type":"exact"}],"termid":"GO:0070201","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0070863":null}}


id: FYPO:0003816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires histidine or lysine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for histidine or lysine","synonyms":[{"name":"growth auxotrophic for histidine or lysine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for histidine or lysine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for lysine or histidine","type":"exact"},{"name":"histidine or lysine auxotrophy","type":"exact"}],"termid":"FYPO:0003816"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: PBO:0044518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled associated activator of morphogenesis 2","termid":"PBO:0044518"}


id: PBO:0064506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit G","termid":"PBO:0064506"}


id: PBO:0048300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase","termid":"PBO:0048300"}


id: PBO:0065388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 2","termid":"PBO:0065388"}


id: PBO:0054490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1890","termid":"PBO:0054490"}


id: GO:0034788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxy-2'-carboxybiphenyl + O2 = 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H+.","definition_xrefs":["UM-BBD_reactionID:r1041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-2'-carboxybiphenyl 1,2-dioxygenase activity","termid":"GO:0034788"}


id: PBO:0089236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit Spc1","termid":"PBO:0089236"}


id: PBO:0082668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cytosolic Fe-S protein assembly (CIA) machinery; contains an Fe-S cluster that receives electrons from NADPH via the action of Tah18p in an early step in the CIA pathway; ortholog of human Ciapin1; protein abundance increases in response to DNA replication stress; inviability of the null mutant is functionally complemented by human CIAPIN1","termid":"PBO:0082668"}


id: PBO:0086041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: GO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N2-(D-1,3-dicarboxypropyl)-L-arginine + NADP+ + H2O = L-arginine + 2-oxoglutarate + NADPH.","definition_xrefs":["EC:1.5.1.19","MetaCyc:D-NOPALINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-nopaline dehydrogenase activity","secondary_identifiers":["RHEA:19637"],"synonyms":[{"name":"2-N-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-nopaline synthase activity","type":"related"},{"name":"N2-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"NOS activity","type":"related"},{"name":"nopaline dehydrogenase activity","type":"related"},{"name":"nopaline synthase activity","type":"related"}],"termid":"GO:0047829"}


id: PBO:0039776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 1","termid":"PBO:0039776"}


id: PBO:0049229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 3","termid":"PBO:0049229"}


id: RO:0002510
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is transcribed from y if and only if x is synthesized from template y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_from","termid":"RO:0002510"}


id: GO:0032154
data:
  {"annotated_genes":["SJAG_00514","SJAG_02222","SJAG_01114","SJAG_04668","SJAG_05285","SJAG_04509","SJAG_04358","SJAG_02572","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83642,85552,88010,95233,101460,102389,110947],"is_not":false,"summary":null,"term":"GO:0032154"},{"annotations":[83745,86924],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090689"}]},"cv_name":"cellular_component","definition":"The cleavage furrow is a plasma membrane invagination at the cell division site. The cleavage furrow begins as a shallow groove and eventually deepens to divide the cytoplasm.","definition_xrefs":["GOC:vw","ISBN:0805319409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01114":null,"SJAG_02222":null,"SJAG_02572":null,"SJAG_03915":null,"SJAG_04358":null,"SJAG_04509":null,"SJAG_04668":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cleavage furrow","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cleavage_furrow"],"termid":"GO:0032154","terms_by_termid":{"GO:0032154":null,"GO:0090689":null}}


id: PBO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Sid1","termid":"PBO:0001270"}


id: PBO:0013767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase ipp1 (predicted)","termid":"PBO:0013767"}


id: GO:0019557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histidine into other compounds, including glutamate and formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"histidine catabolic process","termid":"GO:0006548"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"histidine catabolic process to glutamate and formate","synonyms":[{"name":"histidine breakdown to glutamate and formate","type":"exact"},{"name":"histidine degradation to glutamate and formate","type":"exact"}],"termid":"GO:0019557"}


id: PBO:0088052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; also functions as a protein tag with roles in nutrient sensing and oxidative stress response","termid":"PBO:0088052"}


id: PBO:0068331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 38","termid":"PBO:0068331"}


id: GO:0002207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion following the induction of and contributing to an immune response.","definition_xrefs":["GOC:add","PMID:14991701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion of immunoglobulin genes","termid":"GO:0002206"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes involved in immune response","synonyms":[{"name":"gene conversion of antibody genes during immune response","type":"related"},{"name":"gene conversion of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002207"}


id: PBO:0058032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4253","termid":"PBO:0058032"}


id: GO:0060827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of Wnt signaling through beta-catenin that results in the formation of the neural plate anterior/posterior pattern.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060827)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060827"}


id: GO:0000506
data:
  {"annotated_genes":["SJAG_03066","SJAG_04881","SJAG_02804","SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71170,76336,103904,106845],"is_not":false,"summary":null,"term":"GO:0000506"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast.","definition_xrefs":["GOC:rb","PMID:15163411","GOC:kp","PMID:10944123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"GPI-GlcNAc transferase complex","type":"exact"},{"name":"GPI-GnT complex","type":"exact"},{"name":"GPI-N-acetylglucosaminyltransferase complex","type":"exact"}],"termid":"GO:0000506","terms_by_termid":{"GO:0000506":null}}


id: PBO:0074077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 1","termid":"PBO:0074077"}


id: PBO:0074928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 96A","termid":"PBO:0074928"}


id: PBO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC pseudogene 1","termid":"PBO:0060974"}


id: GO:0003219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a right cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac right ventricle morphogenesis","termid":"GO:0003215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right ventricle formation","termid":"GO:0003219"}


id: PBO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_cellular_hyperosmotic_response","termid":"PBO:0030355"}


id: PBO:0063627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 3","termid":"PBO:0063627"}


id: GO:0046186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetaldehyde, a colorless, flammable liquid intermediate in the metabolism of alcohol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde metabolic process","termid":"GO:0006117"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetaldehyde biosynthetic process","synonyms":[{"name":"acetaldehyde anabolism","type":"exact"},{"name":"acetaldehyde biosynthesis","type":"exact"},{"name":"acetaldehyde formation","type":"exact"},{"name":"acetaldehyde synthesis","type":"exact"}],"termid":"GO:0046186"}


id: PBO:0080213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villin 1","termid":"PBO:0080213"}


id: GO:0102906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (-)-7-epi-alpha-selinene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.86","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7-epi-alpha-selinene synthase activity","secondary_identifiers":["MetaCyc:RXN-8609","RHEA:30383"],"termid":"GO:0102906"}


id: GO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as proteases, lipases, and inflammatory mediators by a neutrophil.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"neutrophil activation involved in immune response","termid":"GO:0002283"},{"relation_name":"part_of","term_name":"neutrophil mediated immunity","termid":"GO:0002446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"neutrophil degranulation","synonyms":[{"name":"heterophil degranulation","type":"related"},{"name":"neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043312"}


id: GO:0102921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + D-glycerate = H+ + 2-(alpha-D-mannosyl)-D-glycerate + GDP.","definition_xrefs":["EC:2.4.1.269","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"mannosylglycerate synthase activity","secondary_identifiers":["MetaCyc:RXN-8849","RHEA:30639"],"termid":"GO:0102921"}


id: GO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis on or near host (obsolete GO:0052145)","termid":"GO:0052145"}


id: GO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-methylacyl-CoA = (2R)-2-methylacyl-CoA.","definition_xrefs":["EC:5.1.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase activity","secondary_identifiers":["Reactome:R-HSA-193452","MetaCyc:5.1.99.4-RXN","Reactome:R-HSA-193763","Reactome:R-HSA-192056","Reactome:R-HSA-389897","RHEA:12657","Reactome:R-HSA-193736"],"synonyms":[{"name":"2-methylacyl-CoA 2-epimerase activity","type":"related"}],"termid":"GO:0008111"}


id: GO:0052429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the B-cell mediated immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont B-cell mediated immune response (obsolete GO:0052429)","synonyms":[{"name":"modulation by organism of symbiont B-cell mediated immune response","type":"exact"},{"name":"regulation by organism of symbiont B-cell mediated immune response","type":"exact"}],"termid":"GO:0052429"}


id: GO:0043591
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structures that lie outside the inner membrane and surround the entire endospore; consists of a peptidoglycan-containing inner layer (the endospore cortex) surrounded by a multilayered proteinaceous coat. An exosporium may be present as an extreme outer layer.","definition_xrefs":["GOC:go_curators","PMID:15035041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore external encapsulating structure","secondary_identifiers":["GO:0055030"],"synonyms":[{"name":"endospore wall","type":"exact"},{"name":"peptidoglycan-based spore wall","type":"exact"},{"name":"spore wall","type":"broad"}],"termid":"GO:0043591"}


id: PBO:0050296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1","termid":"PBO:0050296"}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: PR:000050475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047.","definition_xrefs":["PMID:12181336","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/Phos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"Spom-wis1/Phos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469, MOD:00046|Thr-473, MOD:00047","type":"narrow"},{"name":"wis1/Phos:(S469,T473)","type":"exact"}],"termid":"PR:000050475"}


id: FYPO:0004461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of sexual differentiation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Sexual differentiation RNAs are transcribed from genes whose products are involved in sexual differentiation, i.e. mating and sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of regulation of sexual differentiation gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of sexual differentiation gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased level of sexual differentiation regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased regulation of sexual differentiation gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of sexual differentiation gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004461"}


id: PBO:0064471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 2, accessory subunit","termid":"PBO:0064471"}


id: GO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002856"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"}],"termid":"GO:0002859"}


id: PBO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 27","termid":"PBO:0050171"}


id: GO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid kinase activity","termid":"GO:0043550"}


id: PBO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 4","termid":"PBO:0071866"}


id: PR:Q9HDU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dTDP-D-glucose 4,6-dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.11","secondary_identifiers":["UniProtKB:Q9HDU4"],"synonyms":[{"name":"Spom972h-TGDS","type":"exact"}],"termid":"PR:Q9HDU4"}


id: GO:0061421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving oleic acid that activates or increases the rate of transcription.","definition_xrefs":["PMID:20395639","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription by oleic acid (obsolete GO:0061421)","termid":"GO:0061421"}


id: PBO:0059412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 2","termid":"PBO:0059412"}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: PR:Q9UUK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tma23 gene.","definition_xrefs":["UniProtKB:Q9UUK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1952.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.02","synonyms":[{"name":"Spom972h-tma23","type":"exact"}],"termid":"PR:Q9UUK4"}


id: GO:1905158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:617517"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Factor XII activation (obsolete GO:1905158)","synonyms":[{"name":"regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905158"}


id: PBO:0109112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, tRNA N3-cytidine","termid":"PBO:0109112"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.92","RHEA:18033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0623","MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN","KEGG_REACTION:R01295"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: GO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}


id: GO:0102626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: costunolide + NADPH + O2 + H+ = parthenolide + NADP(3-) + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"parthenolide synthase activity","secondary_identifiers":["MetaCyc:RXN-15531"],"termid":"GO:0102626"}


id: GO:0170015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with carbon dioxide to initiate a change in cell activity.","definition_xrefs":["PMID:24240097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"carbon dioxide receptor activity","termid":"GO:0170015"}


id: GO:0035044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and organization of an aster composed of microtubule arrays originating from the sperm basal body and extending virtually to the egg periphery. The sperm aster ensures the appropriate positioning of the male and female pronuclei.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"sperm aster formation","termid":"GO:0035044"}


id: GO:0038121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 21 (CCL21) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:15059845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 21 receptor activity","synonyms":[{"name":"CCL21 receptor activity","type":"related"}],"termid":"GO:0038121"}


id: PBO:0060065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 12","termid":"PBO:0060065"}


id: GO:0030072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a peptide hormone from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"hormone secretion","termid":"GO:0046879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"peptide hormone secretion","termid":"GO:0030072"}


id: PBO:0084110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein regulator; binds to Hsp90p and may stimulate ATPase activity; originally identified as a high-copy number suppressor of a HSP90 loss-of-function mutation; role in regulating Hsp90 inhibitor drug sensitivity; GFP-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0084110"}


id: PBO:0072849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 4","termid":"PBO:0072849"}


id: GO:0030942
data:
  {"annotated_genes":["SJAG_01759","SJAG_03684","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74809,87265,110297],"is_not":false,"summary":null,"term":"GO:0030942"}]},"cv_name":"molecular_function","definition":"Binding to an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"endoplasmic reticulum signal peptide binding","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"ER signal peptide binding","type":"exact"}],"termid":"GO:0030942","terms_by_termid":{"GO:0030942":null}}


id: PBO:0065665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type N2","termid":"PBO:0065665"}


id: GO:0018905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethyl ether, CH3-O-CH3, the simplest ether. Dimethyl ether, also known wood ether and methyl ether, is a colorless gas that has been used in refrigeration applications.","definition_xrefs":["UM-BBD_pathwayID:dme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dimethyl ether metabolic process","synonyms":[{"name":"dimethyl ether metabolism","type":"exact"},{"name":"methyl ether metabolic process","type":"exact"},{"name":"methyl ether metabolism","type":"exact"}],"termid":"GO:0018905"}


id: GO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-21 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-21 receptor activity","synonyms":[{"name":"IL-21 receptor activity","type":"exact"},{"name":"IL-21R","type":"exact"}],"termid":"GO:0001532"}


id: PBO:0071946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 23","termid":"PBO:0071946"}


id: CHEBI:53745
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-azauracil","termid":"CHEBI:53745"}


id: PBO:0056404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ring-CH-type finger 2","termid":"PBO:0056404"}


id: PBO:0081995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 26","termid":"PBO:0081995"}


id: PBO:0082748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; involved in telomere maintenance; RSC2 has a paralog, RSC1, that arose from the whole genome duplication","termid":"PBO:0082748"}


id: GO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fibrous network that is part of the hyalin layer extracellular matrix. The apical lamina is thought to be principally composed of the glycoproteins fibropellins. This matrix has been found in echinoderms.","definition_xrefs":["GOC:ecd","PMID:2060714","PMID:7608987","PMID:9638331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"hyaline layer","termid":"GO:0033166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical lamina of hyaline layer","termid":"GO:0032579"}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: PBO:0072344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 30","termid":"PBO:0072344"}


id: PBO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase superfamily member 1","termid":"PBO:0046329"}


id: PBO:0073946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1","termid":"PBO:0073946"}


id: FYPO:0002478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"viable curved vacuolated vegetative cell","synonyms":[{"name":"curved vacuolated viable cell","type":"exact"},{"name":"viable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"viable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002478"}


id: PBO:0053826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1090","termid":"PBO:0053826"}


id: PATO:0001271
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of green hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated green","synonyms":[{"name":"bright green","type":"related"}],"termid":"PATO:0001271"}


id: PBO:0087184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A49; essential for nucleolar assembly and for high polymerase loading rate; required for nucleolar localization of Rpa34p","termid":"PBO:0087184"}


id: PBO:0049131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein regulated inducer of neurite outgrowth 2","termid":"PBO:0049131"}


id: GO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the mammary gland cord is generated and organized. The mammary gland cord is a solid epithelial structure that will hollow out, forming the mammary duct.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in mammary gland cord morphogenesis","termid":"GO:0060655"}


id: GO:0006373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-splice site cleavage, exon ligation (obsolete GO:0006373)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"exact"}],"termid":"GO:0006373"}


id: PBO:0090995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 with SPX domain Pqr1/Spx1","termid":"PBO:0090995"}


id: PBO:0084524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the ChAPs family (Chs5p-Arf1p-binding proteins); members include Bch1p, Bch2p, Bud7p, and Chs6p; ChAPs family proteins form the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; BUD7 has a paralog, BCH1, that arose from the whole genome duplication","termid":"PBO:0084524"}


id: FYECO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking nitrogen and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation and recovery","synonyms":[{"name":"recovery from nitrogen depletion","type":"exact"},{"name":"recovery from nitrogen starvation","type":"exact"}],"termid":"FYECO:0000110"}


id: PBO:0091923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus3","termid":"PBO:0091923"}


id: PBO:0073113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 1","termid":"PBO:0073113"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: PBO:0031913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic26/27 (predicted)","termid":"PBO:0031913"}


id: PBO:0086522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; partially overlaps the dubious gene YOR072W-A; diploid deletion strains are methotrexate, paraquat and wortmannin sensitive","termid":"PBO:0086522"}


id: PBO:0055501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2935","termid":"PBO:0055501"}


id: GO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of GTP to directly drive the cellular or subcellular transport of a substance.","definition_xrefs":["EC:3.6.5.-","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement (obsolete GO:0050800)","synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement","type":"exact"}],"termid":"GO:0050800"}


id: FYPO:0001649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased glutamate import","synonyms":[{"name":"decreased L-glutamate import","type":"exact"},{"name":"decreased glutamate import across plasma membrane","type":"exact"},{"name":"decreased glutamate import into cell","type":"exact"},{"name":"decreased glutamate uptake","type":"exact"},{"name":"reduced glutamate import","type":"exact"}],"termid":"FYPO:0001649"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein.","definition_xrefs":["GOC:bf","EC:3.1.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-1482811","Reactome:R-HSA-8980228","Reactome:R-HSA-2395768","Reactome:R-HSA-174757","Reactome:R-HSA-6789310","Reactome:R-HSA-8979996"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: GO:0051853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an associated organism causes the formation of an abnormal mass of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth (obsolete GO:0051853)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth","type":"exact"}],"termid":"GO:0051853"}


id: PR:Q9HDW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01136","PANTHER:PTHR12993:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.01c","secondary_identifiers":["UniProtKB:Q9HDW9"],"synonyms":[{"name":"Spom972h-PIGL","type":"exact"}],"termid":"PR:Q9HDW9"}


id: GO:1901675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 acetylation (obsolete GO:1901675)","synonyms":[{"name":"down regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down regulation of histone H3K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"down-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"down-regulation of histone H3K27 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K27","type":"exact"},{"name":"downregulation of histone H3-K27 acetylation","type":"exact"},{"name":"downregulation of histone H3K27 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K27","type":"exact"},{"name":"inhibition of histone H3-K27 acetylation","type":"narrow"},{"name":"inhibition of histone H3K27 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K27","type":"exact"},{"name":"negative regulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901675"}


id: PBO:0090897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit, ubiquitin-protein ligase E4 Prp19","termid":"PBO:0090897"}


id: GO:0009058
data:
  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id: GO:0060168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenosine receptor signaling pathway. The adenosine receptor pathway is the series of molecular signals generated as a consequence of an adenosine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"is_a","term_name":"regulation of adenosine receptor signaling pathway","termid":"GO:0060167"},{"relation_name":"positively_regulates","term_name":"G protein-coupled adenosine receptor signaling pathway","termid":"GO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of adenosine receptor signaling pathway","synonyms":[{"name":"positive regulation of adenosine receptor signalling pathway","type":"exact"}],"termid":"GO:0060168"}


id: PBO:0090991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taz1-like protein","termid":"PBO:0090991"}


id: PBO:0048694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS2 antisense RNA 1","termid":"PBO:0048694"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: PBO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 64","termid":"PBO:0071062"}


id: GO:0030171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a proton by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:28774948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton channel activity","termid":"GO:0015252"},{"relation_name":"is_a","term_name":"voltage-gated monoatomic cation channel activity","termid":"GO:0022843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated proton channel activity","synonyms":[{"name":"voltage gated proton channel activity","type":"exact"},{"name":"voltage-dependent proton channel activity","type":"exact"}],"termid":"GO:0030171"}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: MOD:01467
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:15939799","Unimod:302#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menadione quinone derivative - site K","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01467"}


id: PBO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in response to mating pheromone","termid":"PBO:0001191"}


id: GO:0038182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular bile acid and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:12524422","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"bile acid receptor activity","termid":"GO:0038181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled bile acid receptor activity","secondary_identifiers":["Wikipedia:G_protein-coupled_bile_acid_receptor"],"synonyms":[{"name":"G-protein coupled bile acid receptor activity","type":"exact"},{"name":"cell surface bile acid receptor","type":"broad"},{"name":"membrane bile acid receptor activity","type":"broad"}],"termid":"GO:0038182"}


id: GO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions within the cell that occur as a result of a single trigger reaction or compound interacting with a chemoreceptor resulting in a modulation of the force with which blood travels through the circulatory system. Chemoreceptors respond to oxygen, carbon dioxide and hydrogen ions.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of blood pressure by chemoreceptor signaling pathway","synonyms":[{"name":"regulation of blood pressure by chemoreceptor signalling pathway","type":"exact"}],"termid":"GO:0010850"}


id: PBO:0005763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf22","termid":"PBO:0005763"}


id: FYPO:0007380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"}],"interesting_parent_ids":["FYPO:0005568","FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"elongated T-shaped vegetative cell","synonyms":[{"name":"elongated T-shaped cell during vegetative growth","type":"exact"},{"name":"elongated T-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"long T-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0007380"}


id: GO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 36 of histone H3.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K36 methylation (obsolete GO:0000415)","synonyms":[{"name":"down regulation of histone H3-K36 methylation","type":"exact"},{"name":"down-regulation of histone H3-K36 methylation","type":"exact"},{"name":"downregulation of histone H3-K36 methylation","type":"exact"},{"name":"inhibition of histone H3-K36 methylation","type":"narrow"}],"termid":"GO:0000415"}


id: GO:0033730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NADP+ = L-tyrosine + NADPH + CO2.","definition_xrefs":["EC:1.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arogenate dehydrogenase [NAD(P)+] activity","termid":"GO:0033731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arogenate dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:15417","MetaCyc:RXN-5682"],"synonyms":[{"name":"L-arogenate:NADP+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"TyrAAT1","type":"related"},{"name":"TyrAAT2","type":"related"},{"name":"TyrAa","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033730"}


id: PR:O13647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.11 gene.","definition_xrefs":["UniProtKB:O13647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8D2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.11","synonyms":[{"name":"Spom972h-SPBC8D2.11","type":"exact"}],"termid":"PR:O13647"}


id: PR:Q09921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F7.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F7.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.10","synonyms":[{"name":"Spom972h-SPAC1F7.10","type":"exact"}],"termid":"PR:Q09921"}


id: PBO:0071458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 64","termid":"PBO:0071458"}


id: GO:0010481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the physical partitioning and separation of an epidermal cell, any of the cells making up the epidermis, into daughter cells.","definition_xrefs":["PMID:17450124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermal cell division","synonyms":[{"name":"hypodermal cell division","type":"related"}],"termid":"GO:0010481"}


id: PR:G2TRQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP23A10.17 gene.","definition_xrefs":["UniProtKB:G2TRQ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P23A10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.17","synonyms":[{"name":"Spom972h-SPBP23A10.17","type":"exact"}],"termid":"PR:G2TRQ4"}


id: GO:0031631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle membrane organization","termid":"GO:1901633"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0023052","GO:0061024"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"down regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"down regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"down-regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"down-regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"downregulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"downregulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"inhibition of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"negative regulation of synaptic vesicle fusion to pre-synaptic active zone membrane","type":"exact"},{"name":"negative regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"broad"},{"name":"negative regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"}],"termid":"GO:0031631"}


id: PBO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 4","termid":"PBO:0045044"}


id: PR:O74752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mas5 gene.","definition_xrefs":["UniProtKB:O74752","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein import protein mas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.11","synonyms":[{"name":"Spom972h-mas5","type":"exact"}],"termid":"PR:O74752"}


id: GO:0032306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of icosanoid secretion","termid":"GO:0032303"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of prostaglandin secretion","synonyms":[{"name":"regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032306"}


id: PBO:0059193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRG antisense RNA 1","termid":"PBO:0059193"}


id: PBO:0058145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4441","termid":"PBO:0058145"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: CHEBI:76243
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrous ammonium sulfate (anhydrous)","termid":"CHEBI:76243"}


id: GO:2001170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170"}


id: PBO:0040968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 39","termid":"PBO:0040968"}


id: FYPO:0001292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"reduced CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"}],"termid":"FYPO:0001292"}


id: PATO:0001247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan hue and high brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"light cyan","termid":"PATO:0001247"}


id: PBO:0027598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: PR:Q9P6N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC823.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitive to high expression protein 9 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.13c","synonyms":[{"name":"Spom972h-SPAC823.13c","type":"exact"}],"termid":"PR:Q9P6N3"}


id: PBO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level","termid":"PBO:0031009"}


id: GO:0008865
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70508,75376],"is_not":false,"summary":null,"term":"GO:0008865"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 6-phosphate.","definition_xrefs":["EC:2.7.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexokinase activity","termid":"GO:0004396"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"fructokinase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:16125","MetaCyc:FRUCTOKINASE-RXN"],"synonyms":[{"name":"ATP:D-fructose 6-phosphotransferase activity","type":"related"},{"name":"D-fructokinase activity","type":"related"},{"name":"D-fructose(D-mannose)kinase activity","type":"related"},{"name":"fructokinase (phosphorylating)","type":"related"}],"termid":"GO:0008865","terms_by_termid":{"GO:0008865":null}}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: GO:0045089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of innate immune response","synonyms":[{"name":"stimulation of innate immune response","type":"narrow"},{"name":"up regulation of innate immune response","type":"exact"},{"name":"up-regulation of innate immune response","type":"exact"},{"name":"upregulation of innate immune response","type":"exact"}],"termid":"GO:0045089"}


id: GO:0015309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + cycloheximide(in) = H+(in) + cycloheximide(out).","definition_xrefs":["TC:2.A.1.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"cycloheximide transmembrane transporter activity","termid":"GO:0015243"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cycloheximide:proton antiporter activity","synonyms":[{"name":"cycloheximide:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015309"}


id: PBO:0069017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 261, pseudogene","termid":"PBO:0069017"}


id: PBO:0047716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 7, pseudogene","termid":"PBO:0047716"}


id: PBO:0085191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF with sequence and positional similarity to the MAL64 gene; the MAL64 gene is thought to be a nonfunctional copy of MAL63; encoded within the complex locus MAL3 in some strains of S. cerevisiae, but not in S288C","termid":"PBO:0085191"}


id: GO:0061938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to or maintained in a location within the somatodendritic compartment.","definition_xrefs":["PMID:18341993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to somatodendritic compartment","synonyms":[{"name":"somatodendritic protein localization","type":"exact"}],"termid":"GO:0061938"}


id: PBO:0039900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF3 antisense RNA 1","termid":"PBO:0039900"}


id: PBO:0075338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 3","termid":"PBO:0075338"}


id: GO:0102698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-5-epi-aristolochene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.61","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-epi-aristolochene synthase activity","secondary_identifiers":["RHEA:28635","MetaCyc:RXN-4781"],"termid":"GO:0102698"}


id: GO:0070499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the formation of an exosporium, the outermost layer of a bacterial endospore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"exosporium assembly","synonyms":[{"name":"exosporium formation","type":"exact"}],"termid":"GO:0070499"}


id: GO:1904771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a doxorubicin stimulus.","definition_xrefs":["PMID:19801496","GO_REF:0000071","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to doxorubicin (obsolete GO:1904771)","termid":"GO:1904771"}


id: PBO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0031594"}


id: PBO:0090340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc1","termid":"PBO:0090340"}


id: GO:0071382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin I","termid":"GO:0034697"},{"relation_name":"is_a","term_name":"cellular response to prostaglandin stimulus","termid":"GO:0071379"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prostaglandin I stimulus","termid":"GO:0071382"}


id: RO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the partners are related via a feeding relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophically_interacts_with","termid":"RO:0002438"}


id: GO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: norspermine + oxygen + H2O = norspermidine + 3-aminopropanal + hydrogen peroxide.","definition_xrefs":["MetaCyc:RXN-10464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine oxidase activity","termid":"GO:0046592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"norspermine:oxygen oxidoreductase activity","secondary_identifiers":["RHEA:25816","EC:1.5.3.16"],"synonyms":[{"name":"norspermine oxidase activity","type":"broad"}],"termid":"GO:0052894"}


id: MOD:00607
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:288","PubMed:7949339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioxoindolealanine lactone","synonyms":[{"name":"Trp->Oxolactone","type":"related"},{"name":"Tryptophan oxidation to oxolactone","type":"related"}],"termid":"MOD:00607"}


id: GO:1903992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein stabilization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18573880"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein stabilization (obsolete GO:1903992)","synonyms":[{"name":"regulation of lysosomal protein stabilization","type":"narrow"},{"name":"regulation of positive regulation of protein stability","type":"exact"},{"name":"regulation of protein sequestering","type":"related"},{"name":"regulation of protein stabilization","type":"exact"},{"name":"regulation of protein stabilization activity","type":"related"}],"termid":"GO:1903992"}


id: PBO:0029386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydroxyurea","termid":"PBO:0029386"}


id: GO:0090588
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in).","definition_xrefs":["PMID:15060041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003824","GO:0016740","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity","termid":"GO:0090588"}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0086453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane-localized protein of unknown function","termid":"PBO:0086453"}


id: PBO:0046854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 2B, pseudogene","termid":"PBO:0046854"}


id: GO:0090586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0022857","GO:0005215","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity","termid":"GO:0090586"}


id: GO:0021594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dgh","GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere formation","termid":"GO:0021594"}


id: GO:0003871
data:
  {"annotated_genes":["SJAG_02290"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96137],"is_not":false,"summary":null,"term":"GO:0003871"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate.","definition_xrefs":["EC:2.1.1.14","RHEA:21196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity","termid":"GO:0042085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R04405","MetaCyc:HOMOCYSMET-RXN"],"synonyms":[{"name":"5-methyltetrahydropteroyltri-L-glutamate:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"MetE","type":"related"},{"name":"cobalamin-independent methionine synthase activity","type":"related"},{"name":"homocysteine methylase activity","type":"related"},{"name":"methionine synthase (cobalamin-independent) activity","type":"related"},{"name":"methyltetrahydropteroylpolyglutamate:homocysteine methyltransferase activity","type":"related"},{"name":"methyltransferase, tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroylglutamate-homocysteine transmethylase activity","type":"related"},{"name":"tetrahydropteroyltriglutamate methyltransferase activity","type":"related"}],"termid":"GO:0003871","terms_by_termid":{"GO:0003871":null}}


id: MOD:00022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-methionine.","definition_xrefs":["PubMed:6692818","PubMed:6411710","RESID:AA0013","ChEBI:29983","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine residue","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-amino-4-(methylthio)butyric acid","type":"exact"},{"name":"2-azanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"L-(-)-methionine","type":"exact"},{"name":"L-methionine","type":"exact"},{"name":"Met","type":"exact"},{"name":"S-methyl-L-homocysteine","type":"exact"},{"name":"alpha-amino-gamma-methylmercaptobutyric acid","type":"exact"},{"name":"alpha-amino-gamma-methylthiobutyric acid","type":"exact"},{"name":"gamma-methylthio-alpha-aminobutyric acid","type":"exact"}],"termid":"MOD:00022"}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: PBO:0001689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Bet3 (predicted)","termid":"PBO:0001689"}


id: GO:0043906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ala-tRNA(Pro).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA editing activity","termid":"GO:0002161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0140098","GO:0140101","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"Ala-tRNA(Pro) hydrolase activity","synonyms":[{"name":"Ala-tRNAPro hydrolase activity","type":"exact"}],"termid":"GO:0043906"}


id: PBO:0087346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base kinase; responsible for synthesis of long-chain base phosphates, which function as signaling molecules, regulates synthesis of ceramide from exogenous long-chain bases, localizes to the Golgi and late endosomes; LCB4 has a paralog, LCB5, that arose from the whole genome duplication","termid":"PBO:0087346"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: GO:0050975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of touch","secondary_identifiers":["Wikipedia:Touch"],"synonyms":[{"name":"perception of touch","type":"exact"},{"name":"tactile sense","type":"exact"},{"name":"taction","type":"exact"},{"name":"tactition","type":"exact"}],"termid":"GO:0050975"}


id: GO:0019678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylmalonyl pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"propionate metabolic process, methylmalonyl pathway","secondary_identifiers":["MetaCyc:PROPIONMET-PWY"],"synonyms":[{"name":"propionate metabolism, methylmalonyl pathway","type":"exact"}],"termid":"GO:0019678"}


id: PBO:0088578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphoryl diester phosphodiesterase Gde1","termid":"PBO:0088578"}


id: PBO:0038339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_added","termid":"PBO:0038339"}


id: PBO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_contributes_to","termid":"PBO:0034334"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: PBO:0050793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR3E antisense RNA 1","termid":"PBO:0050793"}


id: PBO:0065709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase 10","termid":"PBO:0065709"}


id: GO:0052314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["Wikipedia:Phytoalexin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"phytoalexin metabolic process","synonyms":[{"name":"phytoalexin metabolism","type":"exact"}],"termid":"GO:0052314"}


id: PBO:0079651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 U","termid":"PBO:0079651"}


id: PBO:0030904
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoskeleton_organization_during_vegetative_growth","termid":"PBO:0030904"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: FYPO:0005068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites of double-strand breaks in DNA is greater than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:18180284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites during vegetative growth","termid":"FYPO:0000455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites during mitotic S phase","synonyms":[{"name":"accumulation of DNA damage foci during mitotic S phase","type":"related"},{"name":"accumulation of double-strand break sites during mitotic S phase","type":"exact"},{"name":"increased number of DNA damage foci during mitotic S phase","type":"related"},{"name":"increased number of double-strand break sites during S phase during vegetative growth","type":"exact"},{"name":"increased number of double-strand break sites during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0005068"}


id: PBO:0069686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 965, pseudogene","termid":"PBO:0069686"}


id: PR:O42908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A presequence protease, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR11851:SF68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial presequence protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.17","secondary_identifiers":["UniProtKB:O42908"],"synonyms":[{"name":"SPBC119.17","type":"related"},{"name":"Spom972h-PITRM1","type":"exact"}],"termid":"PR:O42908"}


id: MOD:00363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-selenocysteine residues to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#SEC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"},{"relation_name":"is_a","term_name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Sec)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00363"}


id: GO:0008508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).","definition_xrefs":["TC:2.A.28.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"},{"relation_name":"is_a","term_name":"monocarboxylate:sodium symporter activity","termid":"GO:0140161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"bile acid:sodium symporter activity","secondary_identifiers":["Reactome:R-HSA-194187","Reactome:R-HSA-433089","Reactome:R-HSA-194121"],"synonyms":[{"name":"sodium/bile acid symporter activity","type":"exact"}],"termid":"GO:0008508"}


id: PBO:0064956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 8","termid":"PBO:0064956"}


id: PBO:0013747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor Sif3 (predicted)","termid":"PBO:0013747"}


id: GO:0031205
data:
  {"annotated_genes":["SJAG_02354","SJAG_00175","SJAG_02588","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86263,72931,91302,70213],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"}]},"cv_name":"cellular_component","definition":"An endoplasmic reticulum membrane-associated complex involved in the translocation of proteins that are targeted to the ER. In yeast, this complex consists of two subcomplexes, namely, the Sec61 complex and the Sec62/Sec63 complex.","definition_xrefs":["GOC:mtg_sensu","PMID:14617809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0005575","GO:0032991","GO:0005783"],"is_obsolete":false,"name":"endoplasmic reticulum Sec complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0031205","terms_by_termid":{"GO:0031207":null}}


id: PBO:0086547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR274C is not an essential gene","termid":"PBO:0086547"}


id: GO:1900245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of MDA-5 signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"regulation of MDA-5 signaling pathway","termid":"GO:0039533"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"MDA-5 signaling pathway","termid":"GO:0039530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of MDA-5 signaling pathway","synonyms":[{"name":"activation of IFIH1 signaling pathway","type":"narrow"},{"name":"activation of MDA-5 signaling pathway","type":"narrow"},{"name":"activation of MDA5 signaling pathway","type":"narrow"},{"name":"activation of melanoma differentiation-associated gene 5 signaling pathway","type":"narrow"},{"name":"positive regulation of IFIH1 signaling pathway","type":"exact"},{"name":"positive regulation of MDA-5 signalling pathway","type":"exact"},{"name":"positive regulation of MDA5 signaling pathway","type":"narrow"},{"name":"positive regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"up-regulation of IFIH1 signaling pathway","type":"exact"},{"name":"up-regulation of MDA-5 signaling pathway","type":"exact"},{"name":"up-regulation of MDA5 signaling pathway","type":"narrow"},{"name":"up-regulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"},{"name":"upregulation of IFIH1 signaling pathway","type":"exact"},{"name":"upregulation of MDA-5 signaling pathway","type":"exact"},{"name":"upregulation of MDA5 signaling pathway","type":"narrow"},{"name":"upregulation of melanoma differentiation-associated gene 5 signaling pathway","type":"exact"}],"termid":"GO:1900245"}


id: PBO:0057687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1276","termid":"PBO:0057687"}


id: GO:1902337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","GOC:TermGenie","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"regulation of apoptosis involved in development","type":"related"},{"name":"regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902337"}


id: GO:0102543
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: epsilon-rhodomycinone + H2O = 15-demethoxy-epsilon-rhodomycinone + methanol + H+.","definition_xrefs":["GOC:pz","EC:3.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"epsilon-rhodomycinone methylesterase activity","secondary_identifiers":["MetaCyc:RXN-14865"],"termid":"GO:0102543"}


id: GO:0004438
data:
  {"annotated_genes":["SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87126],"is_not":false,"summary":null,"term":"GO:0004438"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3-phosphate + H2O = 1-phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["EC:3.1.3.64"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675994","Reactome:R-HSA-6809777","Reactome:R-HSA-1676114","Reactome:R-HSA-6809975","Reactome:R-HSA-6809325","RHEA:12316","MetaCyc:PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN","GO:0016315","Reactome:R-HSA-1676141","Reactome:R-HSA-6809720","Reactome:R-HSA-1675795"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"D-myo-inositol-1,3-bisphosphate 3-phosphohydrolase activity","type":"related"},{"name":"inositol 1,3-bisphosphate phosphatase activity","type":"related"},{"name":"inositol-1,3-bisphosphate 3-phosphatase activity","type":"related"},{"name":"inositol-polyphosphate 3-phosphatase activity","type":"related"},{"name":"phosphatidyl-3-phosphate 3-phosphohydrolase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphatase activity","type":"exact"}],"termid":"GO:0004438","terms_by_termid":{"GO:0004438":null}}


id: GO:1990164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of a phosphate group.","definition_xrefs":["GOC:mah","PMID:23080121"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A phosphorylation (obsolete GO:1990164)","termid":"GO:1990164"}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: PBO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease Rex3 (predicted)","termid":"PBO:0002679"}


id: PBO:0083085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' AMP hydrolase involved in DNA repair; member of the histidine triad (HIT) superfamily of nucleotide-binding proteins; homolog of Aprataxin, a Hint related protein that is mutated in individuals with ataxia with oculomotor apraxia; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0083085"}


id: GO:0034281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-isokaurene + diphosphate.","definition_xrefs":["PMID:17141283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ent-isokaurene synthase activity","termid":"GO:0034281"}


id: PBO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p150-Glued","termid":"PBO:0002570"}


id: FYPO:0006216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which establishment of actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Establishment of actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled in a specific location.","definition_xrefs":["PomBase:mah","GO:1903486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal establishment of actomyosin contractile ring localization","synonyms":[{"name":"normal establishment of actomyosin contractile ring localisation","type":"exact"},{"name":"normal establishment of actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal establishment of actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal establishment of actomyosin contractile ring positioning","type":"exact"},{"name":"normal establishment of cytokinetic contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006216"}


id: GO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","termid":"GO:0075260"}


id: GO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a cytokine mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of response to cytokine stimulus","termid":"GO:0060760"},{"relation_name":"positively_regulates","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytokine-mediated signaling pathway","synonyms":[{"name":"activation of cytokine mediated signaling pathway","type":"narrow"},{"name":"positive regulation of cytokine and chemokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"positive regulation of cytokine mediated signalling pathway","type":"exact"},{"name":"stimulation of cytokine mediated signaling pathway","type":"narrow"},{"name":"up regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"up-regulation of cytokine mediated signaling pathway","type":"exact"},{"name":"upregulation of cytokine mediated signaling pathway","type":"exact"}],"termid":"GO:0001961"}


id: GO:0110050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(4-oxoglutarate)-L-cysteinylglycine + H2O = 2-oxoglutarate + L-cysteinylglycine.","definition_xrefs":["GOC:ka","PMID:28373563","RHEA:54532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"deaminated glutathione amidase activity","secondary_identifiers":["EC:3.5.1.128"],"termid":"GO:0110050"}


id: GO:1902376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein denaturation that is involved in proteasomal ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:21091378"],"gene_count":0,"genotype_count":0,"name":"obsolete protein denaturation involved in proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1902376)","synonyms":[{"name":"protein denaturation involved in proteasomal pathway","type":"exact"},{"name":"protein denaturation involved in proteasomal processing","type":"related"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein breakdown","type":"exact"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein catabolism","type":"exact"},{"name":"protein denaturation involved in proteasomal ubiquitin-dependent protein degradation","type":"exact"},{"name":"protein denaturation involved in proteasome pathway","type":"related"}],"termid":"GO:1902376"}


id: GO:2001054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process","synonyms":[{"name":"negative regulation of mesenchymal cell apoptosis","type":"narrow"}],"termid":"GO:2001054"}


id: GO:0097443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.","definition_xrefs":["NIF_Subcellular:sao1028571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"sorting endosome","synonyms":[{"name":"MVB-tubule complex","type":"related"}],"termid":"GO:0097443"}


id: PBO:0062233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 15 pseudogene","termid":"PBO:0062233"}


id: GO:0002605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"negatively_regulates","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell antigen processing and presentation","synonyms":[{"name":"down regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"down-regulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"downregulation of dendritic cell antigen processing and presentation","type":"exact"},{"name":"inhibition of dendritic cell antigen processing and presentation","type":"narrow"}],"termid":"GO:0002605"}


id: PBO:0016941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM254 ortholog","termid":"PBO:0016941"}


id: PBO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 109","termid":"PBO:0071107"}


id: GO:0050687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of antiviral mechanisms, thereby facilitating viral replication.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"},{"relation_name":"negatively_regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to virus","synonyms":[{"name":"down regulation of antiviral response","type":"exact"},{"name":"down-regulation of antiviral response","type":"exact"},{"name":"downregulation of antiviral response","type":"exact"},{"name":"inhibition of antiviral response","type":"narrow"},{"name":"negative regulation of antiviral response","type":"exact"}],"termid":"GO:0050687"}


id: FYPO:0001489
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114478],"is_not":false,"summary":null,"term":"FYPO:0001489"}],"single_locus_phenotype":[{"annotations":[114354],"is_not":false,"summary":null,"term":"FYPO:0001489"},{"annotations":[114389],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[114475],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable in the phase of the life cycle during which wild type cells undergo vegetative growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00871":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"inviable vegetative cell","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00409","SJAG_04332","SJAG_04464"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta"],"synonyms":[{"name":"inviable cell during vegetative growth","type":"exact"},{"name":"inviable vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal in vegetative cell","type":"exact"}],"termid":"FYPO:0001489","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0001489":null,"FYPO:0003976":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0060025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 13","termid":"PBO:0060025"}


id: PBO:0053086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1D","termid":"PBO:0053086"}


id: FYECO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract, galactose, glucose, and other components. The concentrations of galactose and glucose are typically around 2-3% each.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES + galactose","synonyms":[{"name":"rich medium with glucose and galactose","type":"related"}],"termid":"FYECO:0000358"}


id: PBO:0066974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 277","termid":"PBO:0066974"}


id: PBO:0086464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication","termid":"PBO:0086464"}


id: GO:0050779
data:
  {"annotated_genes":["SJAG_04880","SJAG_05010","SJAG_01625","SJAG_01191","SJAG_02725","SJAG_00686","SJAG_04825","SJAG_04824","SJAG_02036","SJAG_02383","SJAG_04407","SJAG_04818","SJAG_04006","SJAG_16457","SJAG_03745","SJAG_04084","SJAG_03179","SJAG_03597","SJAG_02808","SJAG_03883","SJAG_02370","SJAG_01910","SJAG_02239","SJAG_04321","SJAG_05694","SJAG_02213","SJAG_03157","SJAG_01521","SJAG_02540","SJAG_01053","SJAG_01818","SJAG_05322","SJAG_01836","SJAG_03113","SJAG_00343","SJAG_00854","SJAG_04153","SJAG_04350","SJAG_01944","SJAG_03876","SJAG_00966","SJAG_00759","SJAG_00285","SJAG_00391"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[75020,76570,78310,105175,107247,73926],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[72347,71784,73805,71493,76493,74485],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043928"},{"annotations":[67296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[72342,101823,102798,110587,71779,88679,87865,71488,97517,91478,92786,111026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[78049,95402,110310,75716,70843,93584,93665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[88205,91075,87567,87622,77677,89925,86452,85485,71361,110794,88112,104506,72418,112267,98444],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87304],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"}]},"cv_name":"biological_process","definition":"Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"positively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01836":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02725":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA destabilization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"termid":"GO:0050779","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043928":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:1990074":null}}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13832:SF93","PRO:DNx","OMA:SCHPO01064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: PBO:0085221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase with autoacylation activity; required for palmitoylation of amino acid permeases containing a C-terminal Phe-Trp-Cys site; required for modification of Chs3p; member of the DHHC family of putative palmitoyltransferases","termid":"PBO:0085221"}


id: GO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a mammary stem cell population by cell division. Mammary stem cells are a source of cells for growth of the mammary gland during puberty and gestation. These cells can give rise to both the luminal and myoepithelial cell types of the gland, and can regenerate the entire organ.","definition_xrefs":["PMID:15987436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary stem cell proliferation","termid":"GO:0002174"}


id: PR:O14144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD-linked sulfhydryl oxidase erv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.08","synonyms":[{"name":"Spom972h-erv1","type":"exact"}],"termid":"PR:O14144"}


id: GO:0019526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"pentitol biosynthetic process","synonyms":[{"name":"pentitol anabolism","type":"exact"},{"name":"pentitol biosynthesis","type":"exact"},{"name":"pentitol formation","type":"exact"},{"name":"pentitol synthesis","type":"exact"}],"termid":"GO:0019526"}


id: PBO:0083096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage response kinase; signal transduction pathway component required for DNA damage and replication checkpoints, promoting cell cycle arrest and DNA repair; role in initiation of DNA replication; inhibits gene gating through NPC protein phosphorylation, to promote fork stability; activates downstream kinase Dun1p; senses mtDNA depletion and mitochondrial ROS; relocalizes to cytosol under hypoxia; contains two FHA domains; human homolog CHEK2 implicated in breast cancer complements the null","termid":"PBO:0083096"}


id: GO:0032978
data:
  {"annotated_genes":["SJAG_05300","SJAG_01405","SJAG_01917","SJAG_03633","SJAG_05302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77173,109869,84527,108558,96385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into a lipid bilayer, e.g., the prokaryotic, mitochondrial, or chloroplast inner membrane, from the inner side.","definition_xrefs":["PMID:14739936","PMID:15473843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane from inner side","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"insertion of proteins into membrane from the inner side","type":"exact"}],"termid":"GO:0032978","terms_by_termid":{"GO:0032979":null}}


id: PBO:0072180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 7","termid":"PBO:0072180"}


id: PBO:0073862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: PBO:0076354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 1","termid":"PBO:0076354"}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: PBO:0040806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"betaine--homocysteine S-methyltransferase 2","termid":"PBO:0040806"}


id: FYPO:0006434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical node of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex. There may be little or no protein detected at the medial cortical node.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortical node","termid":"FYPO:0006326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to medial cortical node, with protein distributed in cell cortex, during vegetative growth","synonyms":[{"name":"cortical drift","type":"related"},{"name":"decreased protein localisation to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localisation to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytokinetic nodes, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"decreased protein localization to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"decreased protein localization to medial cortical node during vegetative growth, with protein distributed in cortex","type":"exact"},{"name":"decreased protein localization to medial cortical node, with protein distributed in cell cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortical node, with protein distributed in cortex, during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"related"},{"name":"reduced protein localization to medial cortical node during vegetative growth, with protein distributed in cell cortex","type":"exact"},{"name":"reduced protein localization to medial cortical node, with protein distributed in cell cortex, during vegetative growth","type":"exact"}],"termid":"FYPO:0006434"}


id: GO:1901576
data:
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