# terms

id: PBO:0079882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3A","termid":"PBO:0079882"}


id: GO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-aspartate + [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n = [beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-6-N-(beta-D-Asp)-L-Lys-D-Ala-D-Ala)]n + ADP + phosphate.","definition_xrefs":["EC:6.3.1.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-aspartate ligase activity","secondary_identifiers":["RHEA:10752","MetaCyc:6.3.1.12-RXN"],"synonyms":[{"name":"D-aspartate:[beta-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)]n ligase (ADP-forming) activity","type":"related"},{"name":"D-aspartic acid-activating enzyme","type":"related"},{"name":"UDP-MurNAc-pentapeptide:D-aspartate ligase activity","type":"related"},{"name":"aslfm","type":"related"}],"termid":"GO:0034025"}


id: GO:1900153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:TermGenie","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:1900151"},{"relation_name":"positively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0044248","GO:0010467"],"is_obsolete":false,"name":"positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","synonyms":[{"name":"activation of deadenylation-dependent mRNA decay","type":"narrow"},{"name":"activation of mRNA breakdown, deadenylation-dependent decay","type":"narrow"},{"name":"activation of mRNA catabolic process, deadenylation-dependent","type":"narrow"},{"name":"activation of mRNA catabolic process, deadenylylation-dependent","type":"narrow"},{"name":"activation of mRNA catabolism, deadenylation-dependent","type":"narrow"},{"name":"activation of mRNA catabolism, deadenylylation-dependent","type":"narrow"},{"name":"activation of mRNA degradation, deadenylation-dependent decay","type":"narrow"},{"name":"activation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"activation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"positive regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"positive regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"positive regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"positive regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"positive regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"positive regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"positive regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"positive regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"up regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"up regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"up regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"up regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"up regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"up regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"up regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"up regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"up regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"up-regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"up-regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"up-regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"up-regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"upregulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"upregulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"upregulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"upregulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900153"}


id: PR:000027845
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dma1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1","synonyms":[{"name":"dma1","type":"exact"}],"termid":"PR:000027845"}


id: PBO:0086806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL218W transcription is regulated by Azf1p and induced by starvation and aerobic conditions; expression also induced in cells treated with the mycotoxin patulin","termid":"PBO:0086806"}


id: GO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"activation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048350"}


id: PBO:0048852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNRHR2 pseudogene 1","termid":"PBO:0048852"}


id: GO:0045015
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108837],"is_not":false,"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to a HDEL sequence, the C terminus tetrapeptide sequence His-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:1327759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005048"],"is_obsolete":false,"name":"HDEL sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDEL receptor activity","type":"narrow"}],"termid":"GO:0045015","terms_by_termid":{"GO:0045015":null}}


id: PBO:0064392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 14","termid":"PBO:0064392"}


id: PBO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 1 pseudogene 1","termid":"PBO:0048438"}


id: PBO:0067729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 27","termid":"PBO:0067729"}


id: PR:Q9P6Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pct1 gene.","definition_xrefs":["UniProtKB:Q9P6Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.04","synonyms":[{"name":"Spom972h-pct1","type":"exact"},{"name":"TPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"polynucleotide 5'-triphosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q6"}


id: PBO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1 (predicted)","termid":"PBO:0000660"}


id: GO:0141102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethylaminomethyluridine34 in tRNA(Leu) + S-adenosyl-L-methionine = 5-carboxymethylaminomethyl-2'-O-methyluridine34 in tRNA(Leu) + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20855540","RHEA:43088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0016741","GO:0003824","GO:0140098","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.207"],"synonyms":[{"name":"tRNA (cytidine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase activity","type":"exact"}],"termid":"GO:0141102"}


id: PBO:0074383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 nonsense mediated mRNA decay factor","termid":"PBO:0074383"}


id: FYPO:0004507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the centromeric regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PomBase:mah","PMID:18362178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000337","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished centromeric DNA separation","synonyms":[{"name":"abolished DNA separation at centromere","type":"exact"},{"name":"abolished centromeric DNA separation during mitosis","type":"exact"},{"name":"abolished centromeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abolished centromeric DNA separation during vegetative growth","type":"exact"},{"name":"abolished mitotic centromeric DNA separation","type":"exact"},{"name":"abolished mitotic sister chromatid separation at centromere","type":"exact"},{"name":"abolished segregation of centromeric DNA","type":"related"},{"name":"abolished sister kinetochore separation","type":"related"}],"termid":"FYPO:0004507"}


id: PBO:0108701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp1","termid":"PBO:0108701"}


id: PBO:0083282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; partially overlaps the verified essential gene RRP14","termid":"PBO:0083282"}


id: GO:0015444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mg2+(out) = ADP + phosphate + Mg2+(in).","definition_xrefs":["RHEA:10260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transmembrane transporter activity","termid":"GO:0015095"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type magnesium transporter activity","secondary_identifiers":["EC:7.2.2.14","MetaCyc:TRANS-RXN-250"],"synonyms":[{"name":"ATP phosphohydrolase (Mg2+-importing)","type":"related"},{"name":"Mg(2+)-importing ATPase activity","type":"related"},{"name":"Mg2+-importing ATPase activity","type":"related"},{"name":"magnesium importing ATPase activity","type":"exact"},{"name":"magnesium transmembrane transporter activity, phosphorylative mechanism","type":"related"},{"name":"magnesium-translocating P-type ATPase activity","type":"related"}],"termid":"GO:0015444"}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_01209","SJAG_02178","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104214,109628,113534],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: PATO:0002509
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D shape quality inhering in a bearer by virtue of the bearer's having six angles and six sides.","definition_xrefs":["Merriam-Webster:hexagonal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexagonal","termid":"PATO:0002509"}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: PBO:0065093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 2","termid":"PBO:0065093"}


id: PBO:0088348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1","termid":"PBO:0088348"}


id: PBO:0028486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_IMP_cyclohydrolase_activity","termid":"PBO:0028486"}


id: GO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dTDP-mannose metabolic process","synonyms":[{"name":"dTDP-mannose metabolism","type":"exact"}],"termid":"GO:0046371"}


id: GO:1900238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulation of metanephric mesenchymal cell migration, by platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","PMID:19019919","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"regulation of metanephric mesenchyme chemotaxis by platelet-derived growth factor receptor-beta signaling pathway","type":"related"}],"termid":"GO:1900238"}


id: PBO:0085076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear 5' to 3' single-stranded RNA exonuclease; involved in RNA metabolism, including rRNA and snoRNA processing, as well as poly (A+) dependent and independent mRNA transcription termination; required for cotranscriptional pre-rRNA cleavage; displaces Cdk1p from elongating transcripts, especially as RNAPII reaches the poly(A) site, negatively regulates phosphorylation of the CTD of RNAPII, and inhibits RNAPII transcriptional elongation","termid":"PBO:0085076"}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


id: PBO:0079562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 1","termid":"PBO:0079562"}


id: FYPO:0001684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to purvalanol A","synonyms":[{"name":"decreased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"decreased transcript level during cellular response to purvalanol A","type":"exact"},{"name":"reduced RNA level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001684"}


id: PBO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 20","termid":"PBO:0075267"}


id: GO:0003051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drinking behavior","termid":"GO:0042756"},{"relation_name":"part_of","term_name":"brain renin-angiotensin system","termid":"GO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angiotensin-mediated drinking behavior","synonyms":[{"name":"angiotensin mediated drinking behavior","type":"exact"}],"termid":"GO:0003051"}


id: PBO:0044313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b561 family member D1","termid":"PBO:0044313"}


id: PBO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_vegetative_growth","termid":"PBO:0033808"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: PBO:0007714
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible frameshifted","termid":"PBO:0007714"}


id: PBO:0028810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_autophosphorylation_during_vegetative_growth","termid":"PBO:0028810"}


id: PBO:0005440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exonuclease for RNA 3' ss-tail","termid":"PBO:0005440"}


id: GO:0009467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoheme class I cytochrome c (obsolete GO:0009467)","synonyms":[{"name":"monoheme class I cytochrome c","type":"exact"}],"termid":"GO:0009467"}


id: GO:0018846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: styrene oxide = phenylacetaldehyde.","definition_xrefs":["EC:5.3.99.7","RHEA:21604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"styrene-oxide isomerase activity","secondary_identifiers":["KEGG_REACTION:R02615","MetaCyc:STYRENE-OXIDE-ISOMERASE-RXN","UM-BBD_reactionID:r0034"],"synonyms":[{"name":"SOI activity","type":"related"},{"name":"styrene oxide isomerase activity","type":"exact"},{"name":"styrene-oxide isomerase (epoxide-cleaving)","type":"related"}],"termid":"GO:0018846"}


id: GO:0075325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism disseminates its spores.","definition_xrefs":["Wikipedia:Spore"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproduction","termid":"GO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore dispersal","secondary_identifiers":["GO:0075327","GO:0075326"],"synonyms":[{"name":"active spore dispersal on or near host","type":"narrow"},{"name":"active spore dispersal on or near host during symbiotic interaction","type":"narrow"},{"name":"passive spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host","type":"narrow"},{"name":"spore dispersal on or near host during symbiotic interaction","type":"exact"}],"termid":"GO:0075325"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["RESID:AA0067","EC:2.1.1.320","RESID:AA0069","PMID:14705965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0008276","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["RHEA:48108","Reactome:R-HSA-6804383"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: PBO:0034211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_intercellular_endoparasite","termid":"PBO:0034211"}


id: SO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:allelic","type":"exact"},{"name":"allelic pseudogenic rRNA","type":"exact"}],"termid":"SO:0002196"}


id: PBO:0051015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 2","termid":"PBO:0051015"}


id: PBO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase, MBOAT Ale1 (predicted)","termid":"PBO:0032766"}


id: PBO:0076638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein like 1","termid":"PBO:0076638"}


id: GO:0004861
data:
  {"annotated_genes":["SJAG_01210"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104206],"is_not":false,"summary":null,"term":"GO:0004861"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["GOC:pr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase inhibitor activity","termid":"GO:0030291"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-69562","Reactome:R-HSA-187934"],"synonyms":[{"name":"CDK inhibitor","type":"related"},{"name":"cyclin dependent kinase inhibitor","type":"related"},{"name":"cyclin dependent protein kinase inhibitor activity","type":"exact"},{"name":"cyclin-dependent kinase inhibitor","type":"related"},{"name":"cyclin-dependent protein kinase inhibitor activity","type":"broad"}],"termid":"GO:0004861","terms_by_termid":{"GO:0004861":null}}


id: PBO:0056309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4 pseudogene 1","termid":"PBO:0056309"}


id: GO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly cGMP-activated cation channel activity","synonyms":[{"name":"intracellular cGMP activated cation channel activity","type":"exact"},{"name":"intracellular cGMP-activated cation channel activity","type":"exact"}],"termid":"GO:0005223"}


id: PBO:0087613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate","termid":"PBO:0087613"}


id: PBO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha B-subunit","termid":"PBO:0005070"}


id: PBO:0089133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD/NADH kinase","termid":"PBO:0089133"}


id: GO:0061381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that will reside in the diencephalon.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain cell migration","termid":"GO:0021885"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration in diencephalon","termid":"GO:0061381"}


id: GO:1900006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendrite development","synonyms":[{"name":"up regulation of dendrite development","type":"related"}],"termid":"GO:1900006"}


id: PBO:0013809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase Erg27 (predicted)","termid":"PBO:0013809"}


id: PBO:0089266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MutS protein Msh1","termid":"PBO:0089266"}


id: PBO:0074926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 94","termid":"PBO:0074926"}


id: PBO:0057805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3127","termid":"PBO:0057805"}


id: PBO:0069101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 348, pseudogene","termid":"PBO:0069101"}


id: FYPO:0003766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial DNA molecules are interlinked by unresolved recombination junctions.","definition_xrefs":["PomBase:mah","PMID:10954073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"aggregated mtDNA","synonyms":[{"name":"aggregated mitochondrial DNA","type":"exact"},{"name":"aggregated mitochondrial chromosomes","type":"exact"},{"name":"aggregated mtDNA during mitotic cell cycle","type":"related"},{"name":"aggregated mtDNA during vegetative growth","type":"exact"},{"name":"fused mitochondrial chromosomes","type":"related"},{"name":"fused mtDNA","type":"related"},{"name":"interlinked mtDNA","type":"exact"}],"termid":"FYPO:0003766"}


id: FYPO:0002549
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[114274,114286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[114273,114285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to stress","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_04312","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","pka1delta","atf1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress","type":"exact"},{"name":"hypersensitive to stress","type":"exact"},{"name":"stress resistance: decreased","type":"related"}],"termid":"FYPO:0002549","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: PBO:0089117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated lipid droplet biogenesis protein, seipin Sei1","termid":"PBO:0089117"}


id: PBO:0072334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 20","termid":"PBO:0072334"}


id: PBO:0109961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109961"}


id: MOD:01538
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["Unimod:730#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01538"}


id: GO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a bicyclic nitroimidazole.","definition_xrefs":["PMID:16387854","PMID:19039139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicyclic nitroimidazole metabolic process","termid":"GO:0052801"},{"relation_name":"is_a","term_name":"nitroimidazole catabolic process","termid":"GO:0052804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"bicyclic nitroimidazole catabolic process","synonyms":[{"name":"bicyclic nitroimidazole breakdown","type":"exact"},{"name":"bicyclic nitroimidazole catabolism","type":"exact"},{"name":"bicyclic nitroimidazole degradation","type":"exact"}],"termid":"GO:0052800"}


id: PR:Q09716
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18B11.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.11","synonyms":[{"name":"Spom972h-SPAC18B11.11","type":"exact"}],"termid":"PR:Q09716"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: FYPO:0001149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing methylamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on methylamine","synonyms":[{"name":"normal cell population growth in presence of methylamine","type":"exact"},{"name":"normal cell population growth on methylamine","type":"exact"},{"name":"normal cellular response to methylamine","type":"related"},{"name":"normal vegetative cell population growth on methylamine","type":"exact"}],"termid":"FYPO:0001149"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: PR:Q09771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atf31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor atf31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.02","synonyms":[{"name":"Spom972h-atf31","type":"exact"}],"termid":"PR:Q09771"}


id: GO:0140634
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of CARD8 and CASP1.","definition_xrefs":["PMID:33420028","PMID:33542150","PMID:33420033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005829","GO:0005737"],"is_obsolete":false,"name":"CARD8 inflammasome complex","termid":"GO:0140634"}


id: PBO:0071143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 6","termid":"PBO:0071143"}


id: PBO:0046653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase B3","termid":"PBO:0046653"}


id: PBO:0074867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 51","termid":"PBO:0074867"}


id: FYPO:0003822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a ribonuclease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased ribonuclease activity","synonyms":[{"name":"reduced ribonuclease activity","type":"exact"}],"termid":"FYPO:0003822"}


id: PBO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation","termid":"PBO:0030966"}


id: GO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell differentiation","termid":"GO:0060019"}


id: GO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ligase activity","synonyms":[{"name":"ligase regulator","type":"exact"}],"termid":"GO:0051340"}


id: PR:Q9UR07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-11 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.17","synonyms":[{"name":"Spom972h-Tf2-11","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR07"}


id: PR:Q09189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase PTC7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12320:SF0","OMA:SCHPO01568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-azacytidine resistance protein azr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.03","secondary_identifiers":["UniProtKB:Q09189"],"synonyms":[{"name":"Spom972h-PPTC7","type":"exact"}],"termid":"PR:Q09189"}


id: PBO:0082648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of serine palmitoyltransferase; responsible along with Lcb2p for the first committed step in sphingolipid synthesis, which is the condensation of serine with palmitoyl-CoA to form 3-ketosphinganine","termid":"PBO:0082648"}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: SO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes exon sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:exonic","type":"exact"},{"name":"Jannovar:exon_variant","type":"exact"},{"name":"VAAST:exon_variant","type":"exact"},{"name":"exon variant","type":"exact"},{"name":"snpEff:EXON","type":"exact"}],"termid":"SO:0001791"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["EC:3.5.1.40","RHEA:15065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["MetaCyc:ACYLAGMATINE-AMIDASE-RXN","KEGG_REACTION:R01425"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: PBO:0053881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1160","termid":"PBO:0053881"}


id: GO:1901604
data:
  {"annotated_genes":["SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87689],"is_not":false,"summary":null,"term":"GO:1901604"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dethiobiotin from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"dethiobiotin transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901604","terms_by_termid":{"GO:1901604":null}}


id: PBO:0081601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 525","termid":"PBO:0081601"}


id: FYPO:0002248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mannose binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"increased mannose binding","termid":"FYPO:0002248"}


id: GO:0071456
data:
  {"annotated_genes":["SJAG_04018","SJAG_00642","SJAG_01150","SJAG_00221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96687,105141,106954,112100],"is_not":false,"summary":null,"term":"GO:0071456"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hypoxia","termid":"GO:0001666"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to hypoxic stress","type":"exact"},{"name":"cellular response to lowered oxygen tension","type":"exact"}],"termid":"GO:0071456","terms_by_termid":{"GO:0071456":null}}


id: FYPO:0003146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrostatic pressure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hydrostatic pressure","synonyms":[{"name":"decreased growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to hydrostatic pressure","type":"exact"},{"name":"hypersensitive to hydrostatic pressure","type":"exact"},{"name":"sensitive to hydrostatic pressure during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrostatic pressure during vegetative growth","type":"exact"}],"termid":"FYPO:0003146"}


id: GO:0071296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotin","termid":"GO:0070781"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin","synonyms":[{"name":"cellular response to Bios IIB","type":"exact"},{"name":"cellular response to coenzyme R","type":"exact"},{"name":"cellular response to vitamin B7","type":"exact"},{"name":"cellular response to vitamin H","type":"exact"}],"termid":"GO:0071296"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"sulfur incorporation into metallo-sulfur cluster","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: GO:0032634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-5 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-5 production","secondary_identifiers":["GO:0042225","GO:0072603"],"synonyms":[{"name":"IL-5 production","type":"exact"},{"name":"interleukin-5 biosynthetic process","type":"narrow"},{"name":"interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032634"}


id: PBO:0062318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 3","termid":"PBO:0062318"}


id: GO:0009585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"},{"relation_name":"part_of","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"red, far-red light phototransduction","synonyms":[{"name":"phytochrome signaling pathway","type":"broad"},{"name":"red-sensitive opsin","type":"related"}],"termid":"GO:0009585"}


id: FYPO:0009031
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of bleomycin than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to bleomycin","synonyms":[{"name":"resistance to bleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to bleomycin during vegetative growth","type":"exact"},{"name":"resistant to bleomycin","type":"exact"}],"termid":"FYPO:0009031"}


id: PBO:0061893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, medium wave sensitive","termid":"PBO:0061893"}


id: PBO:0043296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 14A","termid":"PBO:0043296"}


id: GO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the cytoplasm, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ubiquitin ligase complex","termid":"GO:0000153"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic SCF ubiquitin ligase complex","synonyms":[{"name":"cytoplasmic SCF complex","type":"exact"},{"name":"cytoplasmic Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cytoplasmic cullin complex","type":"exact"}],"termid":"GO:0043223"}


id: PBO:0089485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","termid":"PBO:0089485"}


id: MOD:01978
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using either free L-asparagine and releasing ammonia or using a peptidyl L-aspartic acid residue and releasing water.","definition_xrefs":["PubMed:8706862","RESID:AA0525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01978"}


id: PBO:0075570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin 1","termid":"PBO:0075570"}


id: PBO:0085319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate (PI3P) phosphatase; involved in various protein sorting pathways, including CVT targeting and endosome to vacuole transport; has similarity to the conserved myotubularin dual specificity phosphatase family","termid":"PBO:0085319"}


id: PR:O14212
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C6B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.07c","synonyms":[{"name":"Spom972h-SPAC6B12.07c","type":"exact"}],"termid":"PR:O14212"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: PBO:0075270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 23","termid":"PBO:0075270"}


id: GO:0097312
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.","definition_xrefs":["PMID:22571672","GOC:imk","Wikipedia:Biofilm"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial biofilm matrix component (obsolete GO:0097312)","synonyms":[{"name":"biofilm matrix part","type":"exact"}],"termid":"GO:0097312"}


id: PBO:0029899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_periphery","termid":"PBO:0029899"}


id: PBO:0046203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B","termid":"PBO:0046203"}


id: MOD:00142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phytochromobilin.","definition_xrefs":["Unimod:389#C","PubMed:1634523","RESID:AA0133","ChEBI:15619","PubMed:7918400","PubMed:3208761","PubMed:16593380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phytochromobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-1,2,3,19,22,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phytochromobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"Phytochromobilin","type":"related"},{"name":"S-phytochromobilin-L-cysteine","type":"exact"},{"name":"phytochrome chromophore","type":"exact"},{"name":"phytochromobilin","type":"related"},{"name":"phytochromobilin cysteine adduct","type":"exact"}],"termid":"MOD:00142"}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: PBO:0048200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha4","termid":"PBO:0048200"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: PR:P78773
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acetyl-coenzyme A synthetase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04788","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-coenzyme A synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.02c","secondary_identifiers":["UniProtKB:P78773"],"synonyms":[{"name":"Spom972h-ACSS2","type":"exact"},{"name":"acetate--CoA ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"acyl-activating enzyme (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78773"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_00914","SJAG_04692","SJAG_02314","SJAG_00913","SJAG_02439","SJAG_02571","SJAG_00925","SJAG_00942","SJAG_04670","SJAG_04272","SJAG_02798","SJAG_04038","SJAG_02035","SJAG_03128","SJAG_03905","SJAG_01005","SJAG_00170","SJAG_02416","SJAG_03867","SJAG_00259","SJAG_04547","SJAG_02698","SJAG_04758","SJAG_02198","SJAG_04561","SJAG_03366","SJAG_04257","SJAG_02906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84556,85770,90882,98327,104962,106430],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[83741,93761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[98970,92000,90201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[108302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[93671,106522,108815,112024,103442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[91016,104098,90644,113039,108026,104094,109730,90404,110250,88002,103081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104","GO:0140597"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:24390142","GO_REF:0000059","PMID:22711818","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"},{"relation_name":"is_a","term_name":"regulation of negative chemotaxis","termid":"GO:0050923"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemorepellent activity","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: PBO:0054998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2413","termid":"PBO:0054998"}


id: SO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the final codon of an incompletely annotated transcript is changed.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"inframe_variant","termid":"SO:0001650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_terminal_codon_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:incomplete_terminal_codon_variant","type":"exact"},{"name":"incomplete terminal codon variant","type":"exact"},{"name":"partial_codon","type":"exact"}],"termid":"SO:0001626"}


id: PBO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 61","termid":"PBO:0050358"}


id: FYPO:0001168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ATPase activity","termid":"FYPO:0001167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased ATPase activity","synonyms":[{"name":"reduced ATPase activity","type":"exact"}],"termid":"FYPO:0001168"}


id: FYPO:0005619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured in the cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased level of sumoylated protein in cell","synonyms":[{"name":"increased accumulation of sumoylated protein in cell","type":"related"},{"name":"increased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"increased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"increased sumoylated protein level during vegetative growth","type":"exact"}],"termid":"FYPO:0005619"}


id: PBO:0069143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 394, pseudogene","termid":"PBO:0069143"}


id: PBO:0053211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 9","termid":"PBO:0053211"}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0047659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 10","termid":"PBO:0047659"}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: PBO:0066293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member U, pseudogene","termid":"PBO:0066293"}


id: PBO:0059679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 45","termid":"PBO:0059679"}


id: PBO:0050104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 14","termid":"PBO:0050104"}


id: PBO:0056550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiciliate differentiation and DNA synthesis associated cell cycle protein","termid":"PBO:0056550"}


id: GO:1904664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of N-terminal peptidyl-methionine acetylation.","definition_xrefs":["PMID:20807799","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein acetylation","termid":"GO:1901984"},{"relation_name":"is_a","term_name":"negative regulation of protein maturation","termid":"GO:1903318"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904663"},{"relation_name":"negatively_regulates","term_name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904664"}


id: GO:0009530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell wall that is still able to expand, permitting cell growth. Primary cell walls contain more pectin than secondary walls and no lignin is present.","definition_xrefs":["GOC:jid","PMID:9442872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall","termid":"GO:0009505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"primary cell wall","termid":"GO:0009530"}


id: PBO:0028877
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_maltose_carbon_source","termid":"PBO:0028877"}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: GO:0034564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,4'-dihydroxy-alpha-methylstilbene + O2 = 4-hydroxybenzaldehyde + 4-hydroxyacetophenone + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4,4'-dihydroxy-alpha-methylstilbene dioxygenase activity","termid":"GO:0034564"}


id: PBO:0039779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7 pseudogene 4","termid":"PBO:0039779"}


id: FYPO:0000207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to caffeine is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cellular response to caffeine","synonyms":[{"name":"abnormal cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to caffeine during vegetative growth","type":"exact"}],"termid":"FYPO:0000207"}


id: PBO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 1","termid":"PBO:0061229"}


id: PBO:0040734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR activator of RhoGEF and GTPase","termid":"PBO:0040734"}


id: GO:0022880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylglucosamine(out) = protein histidine + N-acetylglucosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylglucosamine transmembrane transporter activity","termid":"GO:0015572"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0022857","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylglucosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylglucosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022880"}


id: GO:1905420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vascular smooth muscle cell differentiation that is involved in phenotypic switching.","definition_xrefs":["GO_REF:0000060","GOC:BHF_miRNA","GOC:BHF","PMID:25089138","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"},{"relation_name":"is_a","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905420"}


id: FYPO:0006517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions during G0 phase. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere structure during G0","synonyms":[{"name":"normal chromosome structure at telomere during G0","type":"exact"},{"name":"normal chromosome structure at telomeric region during G0","type":"exact"},{"name":"normal telomere structure during cell quiescence","type":"exact"},{"name":"normal telomere structure during quiescence","type":"exact"},{"name":"normal telomeric region structure during G0","type":"exact"}],"termid":"FYPO:0006517"}


id: GO:0010373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gibberellin biosynthetic process","synonyms":[{"name":"negative regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010373"}


id: PBO:0033817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator Sak1","termid":"PBO:0033817"}


id: PBO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Syp1 (predicted)","termid":"PBO:0036461"}


id: GO:1902699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to acetate.","definition_xrefs":["GO_REF:0000093","PMID:18727018","PMID:19539744","GOC:mengo_curators","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to acetate (obsolete GO:1902699)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"pentose breakdown to acetate","type":"exact"},{"name":"pentose catabolism to acetate","type":"exact"},{"name":"pentose degradation to acetate","type":"exact"}],"termid":"GO:1902699"}


id: GO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-hydroxy-16-methoxy-2,3-dihydrotabersonine + S-adenosyl-L-methionine = S-adenosyl-L-homocysteine + deacetoxyvindoline + H+.","definition_xrefs":["EC:2.1.1.99","RHEA:11336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04013","MetaCyc:2.1.1.99-RXN"],"synonyms":[{"name":"16-methoxy-2,3-dihydro-3-hydroxytabersonine methyltransferase activity","type":"related"},{"name":"3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"},{"name":"NMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:3-hydroxy-16-methoxy-2,3-dihydrotabersonine N-methyltransferase activity","type":"related"}],"termid":"GO:0030768"}


id: PBO:0052405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 5B","termid":"PBO:0052405"}


id: GO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-insoluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["GOC:jl","PMID:6337890","PMID:18046696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk granule","termid":"GO:0042718"}


id: GO:0004058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-amino acid + H+ = R-H + CO2.","definition_xrefs":["EC:4.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aromatic-L-amino-acid decarboxylase activity","secondary_identifiers":["MetaCyc:AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN","GO:0016400","Reactome:R-HSA-209924","Reactome:R-HSA-209859"],"synonyms":[{"name":"5-hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"DOPA decarboxylase activity","type":"narrow"},{"name":"L-DOPA decarboxylase activity","type":"narrow"},{"name":"aromatic amino acid decarboxylase activity","type":"related"},{"name":"aromatic-L-amino-acid carboxy-lyase (tryptamine-forming)","type":"narrow"},{"name":"aromatic-L-amino-acid carboxy-lyase activity","type":"related"},{"name":"hydroxytryptophan decarboxylase activity","type":"narrow"},{"name":"tryptophan decarboxylase activity","type":"narrow"}],"termid":"GO:0004058"}


id: PBO:0080630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 77","termid":"PBO:0080630"}


id: GO:0015170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of propanediol from one side of a membrane to the other. Propanediol is a sweet colorless, viscous, hygroscopic liquid used as an antifreeze and in brake fluid; it is also as a humectant in cosmetics and personal care items, although it can be absorbed through the skin with harmful effects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"propanediol transmembrane transporter activity","termid":"GO:0015170"}


id: SO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of an insertion where the insert is in a cytologically inverted orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted","termid":"SO:0001515"}


id: PBO:0048628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric inhibitory polypeptide receptor","termid":"PBO:0048628"}


id: PBO:0075215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNTG2 antisense RNA 1","termid":"PBO:0075215"}


id: FYPO:0001768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional addition of methyl groups to the C38 residue in a tRNA-Asp molecule is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished tRNA-Asp C38 methylation","synonyms":[{"name":"abolished tRNA-Asp C38 methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA-Asp C38 methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA-Asp methylation on C38","type":"exact"},{"name":"tRNA-Asp C38 methylation abolished","type":"exact"}],"termid":"FYPO:0001768"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: GO:0099153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of serotonin from a presynapse, across a chemical synapse, the subsequent activation of serotonin receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, serotonergic","synonyms":[{"name":"serotonergic synaptic transmission","type":"exact"}],"termid":"GO:0099153"}


id: PBO:0091792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Muk1","termid":"PBO:0091792"}


id: GO:1903619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transdifferentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22118091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of transdifferentiation","termid":"GO:1903618"},{"relation_name":"negatively_regulates","term_name":"transdifferentiation","termid":"GO:0060290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transdifferentiation","synonyms":[{"name":"down regulation of transdifferentiation","type":"exact"},{"name":"down-regulation of transdifferentiation","type":"exact"},{"name":"downregulation of transdifferentiation","type":"exact"},{"name":"inhibition of transdifferentiation","type":"narrow"}],"termid":"GO:1903619"}


id: PBO:0089335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine kinase Eki1","termid":"PBO:0089335"}


id: PBO:0055677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase F, gastric type","termid":"PBO:0055677"}


id: GO:0071942
data:
  {"annotated_genes":["SJAG_01887","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72186,72566],"is_not":false,"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"A nucleotide-excision repair complex that is involved in damage sensing during global genome nucleotide excision repair (GG-NER). It is part of the pre-incision (or initial recognition) complex bound to sites of DNA damage. In human, it is composed of XPC, RAD23B and CETN2.","definition_xrefs":["PMID:11279143","PMID:15964821","PMID:19941824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"XPC complex","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0071942","terms_by_termid":{"GO:0071942":null}}


id: PBO:0063203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 2","termid":"PBO:0063203"}


id: FYECO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which menadione was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ menadione","termid":"FYECO:0000303"}


id: GO:0032598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into an immunological synapse.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport into membrane raft","termid":"GO:0032597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"B cell receptor transport into immunological synapse","synonyms":[{"name":"B cell receptor translocation into immunological synapse","type":"exact"},{"name":"BCR translocation into immunological synapse","type":"exact"},{"name":"BCR transport into immunological synapse","type":"exact"}],"termid":"GO:0032598"}


id: PBO:0085077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes","termid":"PBO:0085077"}


id: GO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box H + ACA snoRNP protein (obsolete GO:0005735)","synonyms":[{"name":"box H + ACA snoRNP protein","type":"exact"}],"termid":"GO:0005735"}


id: GO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen reduces a known acceptor other than a cytochrome, an iron-sulfur protein, NAD, NADP, or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, with other known acceptors","secondary_identifiers":["EC:1.12.98.-"],"termid":"GO:0046995"}


id: GO:0000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving carbon catabolites that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0000429"},{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription","termid":"GO:0045991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"carbon catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000436"}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: GO:0045841
data:
  {"annotated_genes":["SJAG_02169","SJAG_03353","SJAG_01837","SJAG_02336","SJAG_04259","SJAG_01330","SJAG_03681","SJAG_01679","SJAG_01297","SJAG_04126","SJAG_02451","SJAG_04699","SJAG_01082","SJAG_04884","SJAG_03126","SJAG_00883","SJAG_04999"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107203,103582,109460,111041,99307,108988,86398,95066,102582],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110692,109689,101679,105199,97246,94929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[89791],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[111803],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"negative regulation of mitotic nuclear division","termid":"GO:0045839"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0000070","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of mitotic metaphase/anaphase transition","type":"narrow"}],"termid":"GO:0045841","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0110353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4B-CDC7 kinase regulatory subunit","termid":"PBO:0110353"}


id: SO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC","secondary_identifiers":["http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"],"synonyms":[{"name":"P1","type":"exact"},{"name":"P1 artificial chromosome","type":"exact"}],"termid":"SO:0000154"}


id: PBO:0108984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 8","termid":"PBO:0108984"}


id: PBO:0060486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nanog homeobox retrogene P8","termid":"PBO:0060486"}


id: PR:O14279
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 14-N (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.10c","synonyms":[{"name":"Spom972h-rrp14","type":"exact"},{"name":"ribosome biogenesis protein rrp14-N (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14279"}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: GO:0030979
data:
  {"annotated_genes":["SJAG_02278","SJAG_04666","SJAG_03057","SJAG_01028","SJAG_02916","SJAG_04184","SJAG_00424","SJAG_00610","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70801,73104,77570,71586,72921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[98270,90509,85152,88042],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"alpha-glucan anabolism","type":"exact"},{"name":"alpha-glucan biosynthesis","type":"exact"},{"name":"alpha-glucan formation","type":"exact"},{"name":"alpha-glucan synthesis","type":"exact"}],"termid":"GO:0030979","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: GO:0070824
data:
  {"annotated_genes":["SJAG_03844","SJAG_00934","SJAG_03982","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71570,103492,107346,108496],"is_not":false,"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that contains a core of four proteins -- Clr1, Clr2, Clr3, and Mit1 in fission yeast -- and localizes to all heterochromatic regions in the genome as well as some euchromatic sites. The complex is involved in regulating nucleosome positioning to assemble higher-order chromatin structures.","definition_xrefs":["GOC:mah","PMID:17289569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuRD complex","termid":"GO:0016581"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005694","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"SHREC complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Snf2/HDAC containing repressor complex","type":"exact"},{"name":"Snf2/Hdac repressive complex","type":"exact"}],"termid":"GO:0070824","terms_by_termid":{"GO:0070824":null}}


id: PBO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2","termid":"PBO:0045994"}


id: GO:0018943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organotin, an organic compound containing a tin atom.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organotin metabolic process","synonyms":[{"name":"organotin metabolism","type":"exact"}],"termid":"GO:0018943"}


id: PBO:0048886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 5, pseudogene","termid":"PBO:0048886"}


id: GO:0071489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to red or far red light","termid":"GO:0071489"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: GO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-3-deoxygalactonate = D-glyceraldehyde + pyruvate.","definition_xrefs":["PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-keto-3-deoxygalactonate aldolase activity","synonyms":[{"name":"KDGal aldolase activity","type":"exact"}],"termid":"GO:0043724"}


id: GO:0043447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["Wikipedia:Alkane","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular biosynthetic process","termid":"GO:0044249"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkane biosynthetic process","synonyms":[{"name":"alkane anabolism","type":"exact"},{"name":"alkane biosynthesis","type":"exact"},{"name":"alkane formation","type":"exact"},{"name":"alkane synthesis","type":"exact"}],"termid":"GO:0043447"}


id: PBO:0091054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS complex subunit Mic19/25","termid":"PBO:0091054"}


id: GO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemopoiesis","termid":"GO:1903706"},{"relation_name":"regulates","term_name":"myeloid cell differentiation","termid":"GO:0030099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid cell differentiation","termid":"GO:0045637"}


id: PBO:0081133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP14 zinc finger protein","termid":"PBO:0081133"}


id: PR:Q9P7R0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentafunctional AROM polypeptide (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.02","synonyms":[{"name":"Spom972h-aro1","type":"exact"}],"termid":"PR:Q9P7R0"}


id: GO:1904562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylinositol 5-phosphate.","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:TermGenie","PMID:23916588","GOC:pad","GOC:PARL","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate metabolic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate metabolism","type":"exact"}],"termid":"GO:1904562"}


id: GO:1904661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:1716172","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of bitter taste","termid":"GO:1904660"},{"relation_name":"negatively_regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of bitter taste","synonyms":[{"name":"down regulation of bitter taste perception","type":"exact"},{"name":"down regulation of sensory perception of bitter taste","type":"exact"},{"name":"down-regulation of bitter taste perception","type":"exact"},{"name":"down-regulation of sensory perception of bitter taste","type":"exact"},{"name":"downregulation of bitter taste perception","type":"exact"},{"name":"downregulation of sensory perception of bitter taste","type":"exact"},{"name":"inhibition of bitter taste perception","type":"narrow"},{"name":"inhibition of sensory perception of bitter taste","type":"narrow"},{"name":"negative regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904661"}


id: GO:0018925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving m-cresol (3-hydroxytoluene), the meta-isoform of cresol. Used to produce agricultural chemicals, and in specialty resins, pharmaceuticals and pressure-sensitive dyes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"m-cresol metabolic process","secondary_identifiers":["MetaCyc:M-CRESOL-DEGRADATION-PWY","UM-BBD_pathwayID:mcr"],"synonyms":[{"name":"3-hydroxytoluene metabolic process","type":"exact"},{"name":"3-hydroxytoluene metabolism","type":"exact"},{"name":"m-cresol metabolism","type":"exact"},{"name":"meta-cresol metabolic process","type":"exact"},{"name":"meta-cresol metabolism","type":"exact"}],"termid":"GO:0018925"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: PBO:0063758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB2 pseudogene 1","termid":"PBO:0063758"}


id: GO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with serotonin and transmitting the signal across the membrane by activation of the Gi/o subunit of an associated cytoplasmic heterotrimeric G protein complex. The Gi/o subunit subsequently inhibits adenylate cyclase and results in a decrease in cyclic AMP (cAMP) levels.","definition_xrefs":["GOC:mah","PMID:18571247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor activity","termid":"GO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"Gi/o-coupled serotonin receptor activity","synonyms":[{"name":"5-HT1 receptor activity","type":"exact"},{"name":"serotonin receptor activity, coupled via Gi/o","type":"exact"}],"termid":"GO:0001586"}


id: GO:0002661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell tolerance induction","synonyms":[{"name":"regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"regulation of B-cell tolerance induction","type":"exact"},{"name":"regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002661"}


id: PBO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 6","termid":"PBO:0051389"}


id: PBO:0041244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 122","termid":"PBO:0041244"}


id: GO:0000947
data:
  {"annotated_genes":["SJAG_02734","SJAG_03743","SJAG_04842"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71275,73516,71729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02734":null,"SJAG_03743":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"amino acid catabolic process to alcohol via Ehrlich pathway","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000947","terms_by_termid":{"GO:0000949":null}}


id: PBO:0001783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha,alpha-trehalose-phosphate synthase (predicted)","termid":"PBO:0001783"}


id: GO:0102196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cortisol + NADP = cortisone + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:68616","PMID:16216911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"cortisol dehydrogenase activity","secondary_identifiers":["EC:1.1.1.146","MetaCyc:RXN-12085"],"termid":"GO:0102196"}


id: GO:0006664
data:
  {"annotated_genes":["SJAG_03115","SJAG_00295","SJAG_00846","SJAG_04924","SJAG_00831","SJAG_01860","SJAG_04878","SJAG_03066","SJAG_02523","SJAG_03506","SJAG_02168","SJAG_03672","SJAG_02913","SJAG_04165","SJAG_04337","SJAG_02488","SJAG_00068","SJAG_03292","SJAG_03801","SJAG_04975","SJAG_05278","SJAG_06383","SJAG_01570","SJAG_02776","SJAG_06425","SJAG_04913","SJAG_02903","SJAG_05327","SJAG_02804","SJAG_05219","SJAG_01416","SJAG_01227","SJAG_03953","SJAG_05311","SJAG_04881","SJAG_03878","SJAG_04119"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71088,74085,87036,74075,109149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[71319,72907,74900,76482,76634,74919,70142,75595,84651,99181,102079,75554,85256,77180,71835,76337,88600,109962,73036,76481,106846,74362,70783,111279,112333,76786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[72531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006505"},{"annotations":[90818,77971,74733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[87437,107762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolipids, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide). Some substances classified as bacterial glycolipids have the sugar group acylated by one or more fatty acids and the glycerol group may be absent.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane lipid metabolic process","termid":"GO:0006643"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"glycolipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycolipid metabolism","type":"exact"}],"termid":"GO:0006664","terms_by_termid":{"GO:0006505":null,"GO:0006506":null,"GO:0006675":null,"GO:0016255":null,"GO:0051999":null}}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: GO:1905752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of argininosuccinate synthase activity.","definition_xrefs":["PMID:19491403","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of argininosuccinate synthase activity (obsolete GO:1905752)","synonyms":[{"name":"regulation of L-citrulline:L-aspartate ligase (AMP-forming)","type":"exact"},{"name":"regulation of arginine succinate synthetase activity","type":"exact"},{"name":"regulation of argininosuccinate synthetase activity","type":"exact"},{"name":"regulation of argininosuccinic acid synthetase activity","type":"exact"},{"name":"regulation of arginosuccinate synthetase activity","type":"exact"},{"name":"regulation of citrulline--aspartate ligase activity","type":"exact"}],"termid":"GO:1905752"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: FYPO:0004014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to UV.","definition_xrefs":["PMID:7957098","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation during cellular response to UV","synonyms":[{"name":"normal cell cycle regulation during cellular response to UV","type":"exact"},{"name":"normal cell cycle regulation during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle delay following UV exposure","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to ultraviolet light","type":"exact"},{"name":"normal mitotic cell cycle regulation in response to UV","type":"exact"}],"termid":"FYPO:0004014"}


id: PBO:0042095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 167","termid":"PBO:0042095"}


id: PBO:0030556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import","termid":"PBO:0030556"}


id: PBO:0064237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 1","termid":"PBO:0064237"}


id: MOD:00116
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-diacylglycerol-L-cysteine.","definition_xrefs":["Unimod:377#C","PubMed:4575979","PubMed:9056182","PubMed:10896212","RESID:AA0107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-diacylglycerol-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[(2S)-2-((9Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-[(S)-2-((Z)-9-octadecenoyloxy)-3-(hexadecanoyloxy)propyl]thiopropanoic acid","type":"exact"},{"name":"Diacylglycerol","type":"related"},{"name":"LIPID S-diacylglycerol cysteine","type":"exact"},{"name":"S-(1-2'-oleoyl-3'-palmitoyl-glycerol)cysteine","type":"exact"},{"name":"S-(2',3'-diacylglycerol)-L-cysteine","type":"exact"},{"name":"S-diacylglycerol-L-cysteine","type":"exact"},{"name":"SAcyl2GlyceroCys","type":"exact"},{"name":"diacylglycerol","type":"related"}],"termid":"MOD:00116"}


id: PBO:0091318
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recovery of STe11 expression","termid":"PBO:0091318"}


id: PBO:0074008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 9","termid":"PBO:0074008"}


id: PATO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking susceptibilty toward an external stimulus.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"susceptibility toward","termid":"PATO:0001043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insusceptible toward","synonyms":[{"name":"insusceptible","type":"exact"}],"termid":"PATO:0001153"}


id: PATO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficiency","synonyms":[{"name":"high efficiency","type":"exact"}],"termid":"PATO:0001676"}


id: PBO:0066271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member E","termid":"PBO:0066271"}


id: PBO:0052217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 1","termid":"PBO:0052217"}


id: GO:0016031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a tRNA is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:11121736","GOC:ma","PMID:10988073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into mitochondrion","termid":"GO:0035927"},{"relation_name":"is_a","term_name":"tRNA transport","termid":"GO:0051031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tRNA import into mitochondrion","synonyms":[{"name":"cytoplasmic tRNA import into mitochondria","type":"exact"},{"name":"cytoplasmic tRNA import into mitochondrion","type":"narrow"},{"name":"cytoplasmic tRNA transport into mitochondrion","type":"exact"},{"name":"cytoplasmic tRNA, mitochondrial import","type":"exact"},{"name":"mitochondrial import of cytoplasmic tRNA","type":"narrow"},{"name":"nuclear-encoded tRNA import into mitochondrion","type":"narrow"}],"termid":"GO:0016031"}


id: FYPO:0003785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"aseptate mononucleate vegetative cell","synonyms":[{"name":"aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"mononucleate aseptate vegetative cell","type":"exact"},{"name":"unseptated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003785"}


id: GO:1990274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any disaggregation of an actomyosin contractile ring into its constituent components that is involved in a mitotic cell cycle.","definition_xrefs":["PMID:14602073","PMID:22891673"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic actomyosin contractile ring disassembly (obsolete GO:1990274)","termid":"GO:1990274"}


id: PBO:0018090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase Rbk1 (predicted)","termid":"PBO:0018090"}


id: PR:Q10138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr102 gene.","definition_xrefs":["UniProtKB:Q10138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C3H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.02","synonyms":[{"name":"Spom972h-csr102","type":"exact"}],"termid":"PR:Q10138"}


id: MOD:01764
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01764"}


id: GO:0097367
data:
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id: GO:0046701
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id: PR:O36020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug126 gene.","definition_xrefs":["UniProtKB:O36020","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 126 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.08","synonyms":[{"name":"Spom972h-mug126","type":"exact"}],"termid":"PR:O36020"}


id: GO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:amm","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 binding","synonyms":[{"name":"CCL5 binding","type":"exact"},{"name":"RANTES binding","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted binding","type":"exact"}],"termid":"GO:0071791"}


id: PBO:0027603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization","termid":"PBO:0027603"}


id: GO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which zygospores are formed. Zygospores are characteristic of the zygomycete fungi (phylum Zygomycota) thick-walled and darkly colored, and usually heavily ornamented as well, with many spines or ridges. It is formed between two specialized organs called suspensors, which are themselves usually heavily ornamented, one from each mating partner. The zygospore forms between them and then breaks away.","definition_xrefs":["GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"zygospore formation","termid":"GO:0034296"}


id: PBO:0053792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1046","termid":"PBO:0053792"}


id: GO:1902427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:nhn","GOC:TermGenie","PMID:22095752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of water channel activity","synonyms":[{"name":"regulation of aquaporin","type":"narrow"},{"name":"regulation of aquaporin permeability","type":"narrow"}],"termid":"GO:1902427"}


id: GO:0047387
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + serine phosphoethanolamine = H+ + phosphoethanolamine + serine.","definition_xrefs":["RHEA:17113","EC:3.1.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"serine-ethanolaminephosphate phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R02817","MetaCyc:3.1.4.13-RXN"],"synonyms":[{"name":"SEP diesterase activity","type":"related"},{"name":"serine ethanolamine phosphodiester phosphodiesterase activity","type":"related"},{"name":"serine-phosphoethanolamine ethanolaminephosphohydrolase activity","type":"related"}],"termid":"GO:0047387"}


id: PBO:0108699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF","termid":"PBO:0108699"}


id: GO:1990643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte colony-stimulating factor stimulus.","definition_xrefs":["PMID:9488469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to granulocyte colony-stimulating factor","termid":"GO:1990638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to granulocyte colony-stimulating factor","termid":"GO:1990643"}


id: PBO:0074806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 1","termid":"PBO:0074806"}


id: PR:000027572
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:11242054","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.2","termid":"PR:000027571"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"SPBC8D2.04, PI060","type":"related"},{"name":"Spom-hht2","type":"exact"}],"termid":"PR:000027572"}


id: PATO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000292 mobility value (obsolete PATO:0000292)","termid":"PATO:0000292"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: PBO:0088864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly chaperone for ribosomal protein Rpl3, WD repeat protein Rrb1","termid":"PBO:0088864"}


id: PBO:0070718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 23","termid":"PBO:0070718"}


id: PBO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12 (predicted)","termid":"PBO:0005401"}


id: PBO:0056045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 maturation factor of ABCE1","termid":"PBO:0056045"}


id: GO:0015019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + heparan alpha-D-glucosaminide = CoA + heparan N-acetyl-alpha-D-glucosaminide.","definition_xrefs":["EC:2.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"heparan-alpha-glucosaminide N-acetyltransferase activity","secondary_identifiers":["RHEA:15125","Reactome:R-HSA-2090085","Reactome:R-HSA-2263492","Reactome:R-HSA-1678660","MetaCyc:2.3.1.78-RXN","Reactome:R-HSA-9036056"],"synonyms":[{"name":"acetyl-CoA:alpha-glucosaminide N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:heparan-alpha-D-glucosaminide N-acetyltransferase activity","type":"related"},{"name":"heparin-alpha-glucosaminide N-acetyltransferase activity","type":"related"}],"termid":"GO:0015019"}


id: PBO:0089487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6","termid":"PBO:0089487"}


id: FYPO:0000938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton during interphase of the mitotic cell cycle does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"abolished protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cortical microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cortical microtubule cytoskeleton mitotic interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to cortical microtubule cytoskeleton during interphase of mitotic cell cycle","type":"exact"},{"name":"protein absent from cortical microtubule cytoskeleton during mitotic interphase","type":"related"},{"name":"protein localization to cortical microtubule cytoskeleton abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0000938"}


id: GO:1905282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:TermGenie","GOC:bc","GOC:BHF_miRNA","PMID:23069713","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905282"}


id: PBO:0041512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 180","termid":"PBO:0041512"}


id: GO:0030470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Process of breakdown or opening of the spore-containing structure, modification of the spore wall, and resumption of growth of the spore. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete spore germination (sensu Fungi) (obsolete GO:0030470)","synonyms":[{"name":"germination (sensu Saccharomyces)","type":"narrow"},{"name":"spore germination (sensu Fungi)","type":"exact"}],"termid":"GO:0030470"}


id: GO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein localization in organelle","termid":"GO:0072595"},{"relation_name":"part_of","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in vacuole","termid":"GO:0072667"}


id: GO:0008442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+.","definition_xrefs":["EC:1.1.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-hydroxyisobutyrate dehydrogenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN","Reactome:R-HSA-508473","Reactome:R-HSA-70885","RHEA:17681"],"termid":"GO:0008442"}


id: PBO:0075752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit alpha","termid":"PBO:0075752"}


id: PBO:0089218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex large subunit Toa1","termid":"PBO:0089218"}


id: GO:0005880
data:
  {"annotated_genes":["SJAG_02045"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87023],"is_not":false,"summary":null,"term":"GO:0005880"}]},"cv_name":"cellular_component","definition":"Any microtubule in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02045":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0015630"],"is_obsolete":false,"name":"nuclear microtubule","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005880","terms_by_termid":{"GO:0005880":null}}


id: FYPO:0005269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to H2O2","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0005269"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: PBO:0047022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A25, pseudogene","termid":"PBO:0047022"}


id: PBO:0087628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic iron-sulfur (FeS) protein assembly machinery; required for maturation of cytosolic and nuclear FeS proteins and for normal resistance to oxidative stress; deficiency results in shortened lifespan and sensitivity to paraquat; homologous to human Narf","termid":"PBO:0087628"}


id: GO:1902931
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23332010","GOC:mengo_curators","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"negatively_regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of alcohol anabolism","type":"exact"},{"name":"down regulation of alcohol biosynthesis","type":"exact"},{"name":"down regulation of alcohol biosynthetic process","type":"exact"},{"name":"down regulation of alcohol formation","type":"exact"},{"name":"down regulation of alcohol synthesis","type":"exact"},{"name":"down-regulation of alcohol anabolism","type":"exact"},{"name":"down-regulation of alcohol biosynthesis","type":"exact"},{"name":"down-regulation of alcohol biosynthetic process","type":"exact"},{"name":"down-regulation of alcohol formation","type":"exact"},{"name":"down-regulation of alcohol synthesis","type":"exact"},{"name":"downregulation of alcohol anabolism","type":"exact"},{"name":"downregulation of alcohol biosynthesis","type":"exact"},{"name":"downregulation of alcohol biosynthetic process","type":"exact"},{"name":"downregulation of alcohol formation","type":"exact"},{"name":"downregulation of alcohol synthesis","type":"exact"},{"name":"inhibition of alcohol anabolism","type":"narrow"},{"name":"inhibition of alcohol biosynthesis","type":"narrow"},{"name":"inhibition of alcohol biosynthetic process","type":"narrow"},{"name":"inhibition of alcohol formation","type":"narrow"},{"name":"inhibition of alcohol synthesis","type":"narrow"},{"name":"negative regulation of alcohol anabolism","type":"exact"},{"name":"negative regulation of alcohol biosynthesis","type":"exact"},{"name":"negative regulation of alcohol formation","type":"exact"},{"name":"negative regulation of alcohol synthesis","type":"exact"},{"name":"negative regulation of solventogenesis","type":"broad"}],"termid":"GO:1902931","terms_by_termid":{"GO:0010895":null}}


id: GO:0018787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + H2O = 4-hydroxybenzoyl CoA + chloride.","definition_xrefs":["EC:3.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"4-chlorobenzoyl-CoA dehalogenase activity","secondary_identifiers":["RHEA:14853","UM-BBD_enzymeID:e0113","MetaCyc:3.8.1.7-RXN"],"synonyms":[{"name":"4-chlorobenzoyl CoA chlorohydrolase activity","type":"related"}],"termid":"GO:0018787"}


id: PBO:0073928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 1","termid":"PBO:0073928"}


id: GO:0032766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotrimeric protein complex formed by the association of NHE3, E3KARP and alpha-actinin upon an increase in calcium ion concentration; found in clusters localized on plasma membrane and in intracellular compartments.","definition_xrefs":["PMID:11948184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NHE3/E3KARP/ACTN4 complex","synonyms":[{"name":"NHE3/E3KARP/alpha-actinin complex","type":"exact"}],"termid":"GO:0032766"}


id: PBO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to uncharacterized proteins from other fungi","termid":"PBO:0086005"}


id: PBO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 2","termid":"PBO:0050027"}


id: PBO:0042378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD209 molecule","termid":"PBO:0042378"}


id: PR:Q10173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein Nuf2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21650:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nuf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.04c","secondary_identifiers":["UniProtKB:Q10173"],"synonyms":[{"name":"NMS complex subunit nuf2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC27F1.04c","type":"related"},{"name":"Spom972h-NUF2","type":"exact"}],"termid":"PR:Q10173"}


id: PBO:0004784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase Gpd1","termid":"PBO:0004784"}


id: SO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a leucoplast, a colorless plastid generally containing starch or oil.","direct_ancestors":[{"relation_name":"is_a","term_name":"plastid_sequence","termid":"SO:0000740"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_sequence","synonyms":[{"name":"leucoplast sequence","type":"exact"}],"termid":"SO:0000747"}


id: MOD:01074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a napthylacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napthylacetyl modified residue","termid":"MOD:01074"}


id: GO:0044732
data:
  {"annotated_genes":["SJAG_04597","SJAG_02246","SJAG_00082","SJAG_03592","SJAG_00229","SJAG_04280","SJAG_00856","SJAG_00910","SJAG_03540","SJAG_01546","SJAG_06270","SJAG_01146","SJAG_05185","SJAG_01370","SJAG_04239","SJAG_02737","SJAG_01799","SJAG_00800","SJAG_00646","SJAG_02514","SJAG_04498","SJAG_04551","SJAG_02045","SJAG_03891","SJAG_01538","SJAG_04901","SJAG_04461","SJAG_04943","SJAG_02104","SJAG_05264","SJAG_05315","SJAG_00807","SJAG_00907","SJAG_00104","SJAG_02761","SJAG_03062","SJAG_01785","SJAG_00142","SJAG_03615","SJAG_03342","SJAG_01775","SJAG_05266","SJAG_01756","SJAG_03376","SJAG_00724","SJAG_02724","SJAG_02058","SJAG_01790","SJAG_01563","SJAG_02556","SJAG_01188","SJAG_02098","SJAG_03695","SJAG_05207","SJAG_05309","SJAG_00982","SJAG_03501","SJAG_02795","SJAG_02886","SJAG_04884","SJAG_01224","SJAG_00317","SJAG_05196","SJAG_04745","SJAG_03287","SJAG_04140","SJAG_01401","SJAG_01232","SJAG_07018","SJAG_05205","SJAG_04931","SJAG_03602","SJAG_03026","SJAG_03936","SJAG_03048","SJAG_04841","SJAG_01082","SJAG_02542","SJAG_00666","SJAG_04609","SJAG_03835","SJAG_03544","SJAG_03843","SJAG_01242","SJAG_02169","SJAG_00333","SJAG_01422","SJAG_05978","SJAG_02923","SJAG_03200","SJAG_03216","SJAG_01215","SJAG_00918","SJAG_02266","SJAG_02332","SJAG_01464","SJAG_04980","SJAG_04457","SJAG_02609","SJAG_01386","SJAG_03810","SJAG_03612","SJAG_03116","SJAG_04595","SJAG_02921","SJAG_02624","SJAG_00356","SJAG_02336","SJAG_05290","SJAG_03264","SJAG_04455","SJAG_04653","SJAG_03491","SJAG_03259","SJAG_03681","SJAG_02616","SJAG_04558","SJAG_02550","SJAG_03351","SJAG_01760","SJAG_00773","SJAG_01297","SJAG_01371","SJAG_03508","SJAG_01620","SJAG_02444","SJAG_02232","SJAG_01330","SJAG_03052","SJAG_01745","SJAG_00472","SJAG_04468","SJAG_01805","SJAG_00719","SJAG_02186","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70927,71155,74207,83164,84680,84957,85315,85346,85439,85683,85821,86395,86641,86651,86828,86976,87022,87382,87912,88133,88855,89066,89333,89397,89478,89539,89814,89841,89989,89996,90346,91819,91867,91927,91937,92018,92262,92314,92818,92984,93331,93557,93948,94129,95080,95557,95607,95674,95851,95984,96000,96060,96736,97082,97580,97755,98459,99123,99231,99303,99968,100542,100850,101674,101717,101804,101989,102200,102844,103578,103662,104055,104070,104332,104851,105194,105454,105462,106182,106304,106745,106923,107698,107980,108218,108870,109858,109975,110085,110123,110446,111039,111143,111646,111835,112128,112287,112296,112369,112391,113195,113275,113696,113792,114531,114533,114543],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[92405,95327,93794],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061493"},{"annotations":[104899,107852,104154,105849,108054,112049,110284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061496"},{"annotations":[105850,104900,106674,98229,96450,104155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061497"},{"annotations":[97787,100720,106439,86789,102490,101745,98235,95331,105791,96411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071958"},{"annotations":[91206,109681,108058,101746,95146,88452,100403,98238,102887,104161,105793,105853,104905,97790,106445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071957"},{"annotations":[112054,102445,110610,104162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061499"}]},"cv_name":"cellular_component","definition":"The microtubule organizing center that forms as part of the mitotic cell cycle; functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body","termid":"GO:0005816"}],"gene_count":136,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00104":null,"SJAG_00142":null,"SJAG_00229":null,"SJAG_00317":null,"SJAG_00333":null,"SJAG_00356":null,"SJAG_00472":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00719":null,"SJAG_00724":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00807":null,"SJAG_00856":null,"SJAG_00907":null,"SJAG_00910":null,"SJAG_00918":null,"SJAG_00982":null,"SJAG_01082":null,"SJAG_01146":null,"SJAG_01188":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01242":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01386":null,"SJAG_01401":null,"SJAG_01422":null,"SJAG_01464":null,"SJAG_01538":null,"SJAG_01546":null,"SJAG_01563":null,"SJAG_01620":null,"SJAG_01745":null,"SJAG_01756":null,"SJAG_01760":null,"SJAG_01775":null,"SJAG_01785":null,"SJAG_01790":null,"SJAG_01799":null,"SJAG_01805":null,"SJAG_02045":null,"SJAG_02058":null,"SJAG_02098":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02186":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_02266":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02444":null,"SJAG_02514":null,"SJAG_02542":null,"SJAG_02550":null,"SJAG_02556":null,"SJAG_02609":null,"SJAG_02616":null,"SJAG_02624":null,"SJAG_02724":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02795":null,"SJAG_02886":null,"SJAG_02921":null,"SJAG_02923":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03052":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03200":null,"SJAG_03216":null,"SJAG_03259":null,"SJAG_03264":null,"SJAG_03287":null,"SJAG_03342":null,"SJAG_03351":null,"SJAG_03376":null,"SJAG_03491":null,"SJAG_03501":null,"SJAG_03508":null,"SJAG_03540":null,"SJAG_03544":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03612":null,"SJAG_03615":null,"SJAG_03681":null,"SJAG_03695":null,"SJAG_03708":null,"SJAG_03810":null,"SJAG_03835":null,"SJAG_03843":null,"SJAG_03891":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04239":null,"SJAG_04280":null,"SJAG_04455":null,"SJAG_04457":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_04498":null,"SJAG_04551":null,"SJAG_04558":null,"SJAG_04595":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04653":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04901":null,"SJAG_04931":null,"SJAG_04943":null,"SJAG_04980":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05205":null,"SJAG_05207":null,"SJAG_05264":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05309":null,"SJAG_05315":null,"SJAG_05978":null,"SJAG_06270":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null,"PMID:32243490":null},"termid":"GO:0044732","terms_by_termid":{"GO:0044732":null,"GO:0061493":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0071958":null}}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: GO:0014735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle atrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle atrophy","termid":"GO:0014889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle atrophy","termid":"GO:0014735"}


id: PBO:0046560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 2","termid":"PBO:0046560"}


id: PBO:0035953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_acetylation_during_vegetative_growth","termid":"PBO:0035953"}


id: PBO:0078823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-6","termid":"PBO:0078823"}


id: PBO:0048897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 19","termid":"PBO:0048897"}


id: PBO:0005383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2-C, Ubc11","termid":"PBO:0005383"}


id: GO:0047536
data:
  {"annotated_genes":["SJAG_04678","SJAG_03312","SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72419,75731,94882],"is_not":false,"summary":null,"term":"GO:0047536"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-2-aminoadipate = 2-oxoadipate + L-glutamate.","definition_xrefs":["EC:2.6.1.39","RHEA:12601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03312":null,"SJAG_04678":null,"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"2-aminoadipate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["KEGG_REACTION:R01939","MetaCyc:2-AMINOADIPATE-AMINOTRANSFERASE-RXN","Reactome:R-HSA-508561","Reactome:R-HSA-70952"],"synonyms":[{"name":"2-aminoadipate aminotransferase activity","type":"exact"},{"name":"2-aminoadipic aminotransferase activity","type":"related"},{"name":"L-2-aminoadipate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"alpha-aminoadipate aminotransferase activity","type":"related"},{"name":"glutamate-alpha-ketoadipate transaminase activity","type":"related"},{"name":"glutamic-ketoadipic transaminase activity","type":"related"}],"termid":"GO:0047536","terms_by_termid":{"GO:0047536":null}}


id: PR:Q9HGQ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm401 gene.","definition_xrefs":["UniProtKB:Q9HGQ2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.04","synonyms":[{"name":"Spom972h-trm401","type":"exact"},{"name":"tRNA (cytosine-5-)-methyltransferase trm4a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGQ2"}


id: GO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine pentaphosphate metabolic process","termid":"GO:0015972"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine pentaphosphate biosynthetic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine pentaphosphate anabolism","type":"exact"},{"name":"guanosine pentaphosphate biosynthesis","type":"exact"},{"name":"guanosine pentaphosphate formation","type":"exact"},{"name":"guanosine pentaphosphate synthesis","type":"exact"}],"termid":"GO:0015973"}


id: PBO:0055631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3070","termid":"PBO:0055631"}


id: PBO:0090378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Ptr1-like","termid":"PBO:0090378"}


id: PBO:0071508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 11","termid":"PBO:0071508"}


id: GO:0140515
data:
  {"annotated_genes":["SJAG_03073","SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89441,96901],"is_not":false,"summary":null,"term":"GO:0140515"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the mitotic nuclear bridge during closed mitosis.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic nuclear membrane organization","termid":"GO:0101024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear bridge organization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140515","terms_by_termid":{"GO:0140515":null}}


id: GO:0006695
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75053],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol metabolic process","termid":"GO:0008203"},{"relation_name":"is_a","term_name":"sterol biosynthetic process","termid":"GO:0016126"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cholesterol biosynthetic process","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"cholesterol anabolism","type":"exact"},{"name":"cholesterol biosynthesis","type":"exact"},{"name":"cholesterol formation","type":"exact"},{"name":"cholesterol synthesis","type":"exact"}],"termid":"GO:0006695","terms_by_termid":{"GO:0045540":null}}


id: PBO:0029298
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_S-methyl-L-ergothioneine_level_during_G0","termid":"PBO:0029298"}


id: GO:0060705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the neurons of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in salivary gland development","termid":"GO:0060705"}


id: PBO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pcl1","termid":"PBO:0001369"}


id: PBO:0066127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 6","termid":"PBO:0066127"}


id: PBO:0055532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2967","termid":"PBO:0055532"}


id: PBO:0089911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 ATPase subunit","termid":"PBO:0089911"}


id: GO:0047127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + thiomorpholine-3-carboxylate = NAD(P)H + 3,4-dehydro-1,4-thiomorpholine-3-carboxylate.","definition_xrefs":["EC:1.5.1.25","MetaCyc:1.5.1.25-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thiomorpholine-carboxylate dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-5693347"],"synonyms":[{"name":"ketimine reductase activity","type":"related"},{"name":"ketimine-reducing enzyme","type":"related"},{"name":"thiomorpholine-3-carboxylate:NAD(P)+ 5,6-oxidoreductase activity","type":"related"}],"termid":"GO:0047127"}


id: PBO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.58","termid":"PBO:0002130"}


id: PBO:0086159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for proteasome assembly during quiescence; binds to base of the proteasome regulartory particle; required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086159"}


id: FYECO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A culture in which strains of different genetic backgrounds are grown together in one culture.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"competitive culture","termid":"FYECO:0000275"}


id: PBO:0069314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 572, pseudogene","termid":"PBO:0069314"}


id: PBO:0079690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 4A","termid":"PBO:0079690"}


id: PBO:0048821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5 pseudogene 5","termid":"PBO:0048821"}


id: GO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small cytoplasmic ribonucleoprotein (obsolete GO:0030356)","synonyms":[{"name":"scRNP","type":"exact"},{"name":"small cytoplasmic ribonucleoprotein","type":"exact"}],"termid":"GO:0030356"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: PR:Q9URY4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC869.01 gene.","definition_xrefs":["UniProtKB:Q9URY4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidase C869.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.01","synonyms":[{"name":"Spom972h-SPAC869.01","type":"exact"}],"termid":"PR:Q9URY4"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: PR:O74417
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC14G10.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14G10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC14G10.04","synonyms":[{"name":"Spom972h-SPCC14G10.04","type":"exact"}],"termid":"PR:O74417"}


id: PBO:0078697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 8-1","termid":"PBO:0078697"}


id: PATO:0000605
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000605 placement value (obsolete PATO:0000605)","synonyms":[{"name":"location","type":"related"},{"name":"position","type":"related"}],"termid":"PATO:0000605"}


id: PBO:0089847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein, protein phosphatase regulatory subunit","termid":"PBO:0089847"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: _global:causal_relation_between_material_entity_and_a_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","secondary_identifiers":["RO:0002595"],"termid":"_global:causal_relation_between_material_entity_and_a_process"}


id: GO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein, in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of peptidase activity in other organism involved in symbiotic interaction (obsolete GO:0052198)","synonyms":[{"name":"modulation of protease activity in other organism during symbiotic interaction","type":"related"},{"name":"modulation of protease activity in other organism involved in symbiotic interaction","type":"narrow"}],"termid":"GO:0052198"}


id: PBO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP93 divergent transcript","termid":"PBO:0061679"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: PBO:0066416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renin binding protein","termid":"PBO:0066416"}


id: PBO:0057451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR570 host gene","termid":"PBO:0057451"}


id: PBO:0030333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphoinositide_level","termid":"PBO:0030333"}


id: PBO:0058199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4492","termid":"PBO:0058199"}


id: PBO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysophosphatidylethanolamine_level","termid":"PBO:0034589"}


id: PBO:0058609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6741","termid":"PBO:0058609"}


id: PBO:0049407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylyl cyclase domain containing 1","termid":"PBO:0049407"}


id: GO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate = L-phenylalanine + H2O + CO2.","definition_xrefs":["MetaCyc:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN","EC:4.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"arogenate dehydratase activity","secondary_identifiers":["RHEA:12536"],"synonyms":[{"name":"L-arogenate hydro-lyase (decarboxylating)","type":"related"},{"name":"L-arogenate hydro-lyase (decarboxylating; L-phenylalanine-forming)","type":"related"},{"name":"carboxycyclohexadienyl dehydratase activity","type":"exact"}],"termid":"GO:0047769"}


id: GO:0018497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethene + 2 H+ + 2 e- = 1-chloro-2,2-bis(4-chlorophenyl)ethane. 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU; 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS.","definition_xrefs":["UM-BBD_reactionID:r0514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrogenase activity","synonyms":[{"name":"DDMS dehydrogenase activity","type":"exact"}],"termid":"GO:0018497"}


id: GO:0010196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is emitted as heat. This process helps maintain the balance between dissipation and utilization of light energy to minimize generation of oxidizing molecules, thereby protecting the plant against photo-oxidative damage.","definition_xrefs":["PMID:10938857","PMID:10667783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy quenching","termid":"GO:1990066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonphotochemical quenching","termid":"GO:0010196"}


id: PBO:0108543
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0108543"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: GO:0070516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the cyclin-dependent protein kinase activating kinase (CAK) holoenzyme complex with ERCC2.","definition_xrefs":["PMID:8692841","PMID:8692842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"CAK-ERCC2 complex","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase holoenzyme-ERCC2 complex","type":"exact"}],"termid":"GO:0070516"}


id: PBO:0085942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant sensitive to 6-azauracil (6AU) and mycophenolic acid (MPA)","termid":"PBO:0085942"}


id: GO:0047876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + oligoglycosylglucosylceramide = ceramide + oligoglycosylglucose.","definition_xrefs":["EC:3.2.1.123","MetaCyc:ENDOGLYCOSYLCERAMIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"endoglycosylceramidase activity","secondary_identifiers":["RHEA:22288"],"synonyms":[{"name":"EGCase activity","type":"related"},{"name":"endo-glucosylceramidase activity","type":"related"},{"name":"endoglycoceramidase activity","type":"related"},{"name":"glycosyl-N-acetyl-sphingosine 1,1-beta-D-glucanohydrolase activity","type":"related"},{"name":"oligoglycosylglucosylceramide glycohydrolase activity","type":"related"}],"termid":"GO:0047876"}


id: PBO:0061131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 1","termid":"PBO:0061131"}


id: PBO:0057252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 452","termid":"PBO:0057252"}


id: GO:2000414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibronectin-dependent thymocyte migration.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of thymocyte migration","termid":"GO:2000411"},{"relation_name":"is_a","term_name":"regulation of fibronectin-dependent thymocyte migration","termid":"GO:2000413"},{"relation_name":"negatively_regulates","term_name":"fibronectin-dependent thymocyte migration","termid":"GO:0072681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibronectin-dependent thymocyte migration","synonyms":[{"name":"negative regulation of fibronectin-dependent immature T cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-cell migration","type":"related"},{"name":"negative regulation of fibronectin-dependent immature T-lymphocyte migration","type":"related"},{"name":"negative regulation of fibronectin-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000414"}


id: PBO:0057673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1264","termid":"PBO:0057673"}


id: PBO:0079015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-SeC (TCA) 3-1","termid":"PBO:0079015"}


id: FYPO:0002849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is curved when the cell population has been in stationary phase and is then placed in conditions that allow recovery. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"curved cell during recovery from stationary phase","synonyms":[{"name":"comma-shaped cell during recovery from stationary phase","type":"exact"},{"name":"curved cell during recovery from stationary phase during mitotic cell cycle","type":"related"},{"name":"curved cell during vegetative growth following stationary phase","type":"exact"}],"termid":"FYPO:0002849"}


id: GO:0047593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-acetyl-D-glucose + H2O = D-glucose + acetate + H+.","definition_xrefs":["EC:3.1.1.33","RHEA:18485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0019213","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"6-acetylglucose deacetylase activity","secondary_identifiers":["KEGG_REACTION:R00327","MetaCyc:6-ACETYLGLUCOSE-DEACETYLASE-RXN"],"synonyms":[{"name":"6-O-acetylglucose deacetylase activity","type":"related"},{"name":"6-acetyl-D-glucose acetylhydrolase activity","type":"related"}],"termid":"GO:0047593"}


id: PBO:0068246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal 3","termid":"PBO:0068246"}


id: PBO:0090146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex polyphosphate synthetase subunit Vtc2/3","termid":"PBO:0090146"}


id: PBO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone M-factor receptor Map3","termid":"PBO:0001763"}


id: PBO:0017844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deaminase (predicted)","termid":"PBO:0017844"}


id: PBO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 22","termid":"PBO:0072091"}


id: PBO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 80 pseudogene","termid":"PBO:0070166"}


id: PR:O42667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssm4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein ssm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.13c","synonyms":[{"name":"Spom972h-ssm4","type":"exact"}],"termid":"PR:O42667"}


id: PBO:0070400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 axonemal microtubule associated","termid":"PBO:0070400"}


id: PBO:0069602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 879, pseudogene","termid":"PBO:0069602"}


id: GO:0098680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); the addition of a terminal nucleotide to an RNA molecule in the absence of a nucleic acid template.","definition_xrefs":["GOC:BHF","PMID:15994230","GOC:BHF_telomere","GOC:dos","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"template-free RNA nucleotidyltransferase","termid":"GO:0098680"}


id: PBO:0081862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF793 antisense RNA 1 (head to head)","termid":"PBO:0081862"}


id: MOD:01489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01489"}


id: PBO:0065456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 3","termid":"PBO:0065456"}


id: GO:1901706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of bone as it progresses from its formation to the mature state.","definition_xrefs":["GOC:TermGenie","PMID:21571217","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in bone development","termid":"GO:1901706"}


id: PBO:0003100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Pep12","termid":"PBO:0003100"}


id: GO:0098934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in a dendrite from the postsynapse towards the cell body.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic transport","termid":"GO:0098935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retrograde dendritic transport","termid":"GO:0098934"}


id: PBO:0070188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 106 pseudogene","termid":"PBO:0070188"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95561,99928],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["GOC:mah","PMID:25009287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: PBO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcipressin (predicted)","termid":"PBO:0000202"}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: PBO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 9","termid":"PBO:0071403"}


id: PBO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-box containing 3","termid":"PBO:0050276"}


id: GO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.","definition_xrefs":["EC:3.5.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"aminoacylase activity","secondary_identifiers":["Reactome:R-HSA-9753944","Reactome:R-HSA-9638046","Reactome:R-HSA-5579081","Reactome:R-HSA-5433074","RHEA:15565","MetaCyc:AMINOACYLASE-RXN"],"synonyms":[{"name":"L-amino-acid acylase activity","type":"related"},{"name":"L-aminoacylase activity","type":"related"},{"name":"N-acyl-L-amino-acid amidohydrolase activity","type":"related"},{"name":"acylase I activity","type":"narrow"},{"name":"alpha-N-acylaminoacid hydrolase activity","type":"related"},{"name":"amido acid deacylase activity","type":"related"},{"name":"aminoacylase I activity","type":"narrow"},{"name":"benzamidase activity","type":"related"},{"name":"dehydropeptidase II activity","type":"narrow"},{"name":"hippurase activity","type":"related"},{"name":"histozyme activity","type":"related"},{"name":"long acyl amidoacylase activity","type":"related"},{"name":"short acyl amidoacylase activity","type":"related"}],"termid":"GO:0004046"}


id: GO:1901641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ITP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ITP binding","termid":"GO:1901641"}


id: PBO:0057152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 300","termid":"PBO:0057152"}


id: GO:0051980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of the iron chelate iron-nicotianamine (Fe-NA) from one side of a membrane to the other.","definition_xrefs":["PMID:20625001","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"iron-nicotianamine transmembrane transporter activity","synonyms":[{"name":"Fe-NA chelate transporter activity","type":"exact"}],"termid":"GO:0051980"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72853],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:25533955","PMID:31101919","PMID:28283058","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PBO:0067783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 85","termid":"PBO:0067783"}


id: PBO:0090766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic spindle pole body KASH domain protein Kms2","termid":"PBO:0090766"}


id: PBO:0076257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1","termid":"PBO:0076257"}


id: PR:P40384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein SPO11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10848:SF0","OMA:SCHPO00725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.11","secondary_identifiers":["UniProtKB:P40384"],"synonyms":[{"name":"Spom972h-SPO11","type":"exact"}],"termid":"PR:P40384"}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: PBO:0028533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_secondary_cell_septum_biogenesis","termid":"PBO:0028533"}


id: PBO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3 (predicted)","termid":"PBO:0003043"}


id: GO:0010456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the dorsal spinal cord cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}


id: PBO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 like","termid":"PBO:0061279"}


id: PBO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid modulatory element binding protein 1","termid":"PBO:0048765"}


id: GO:0051346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catalytic activity","termid":"GO:0043086"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrolase activity","synonyms":[{"name":"down regulation of hydrolase activity","type":"exact"},{"name":"down-regulation of hydrolase activity","type":"exact"},{"name":"downregulation of hydrolase activity","type":"exact"},{"name":"hydrolase inhibitor","type":"exact"},{"name":"inhibition of hydrolase activity","type":"narrow"}],"termid":"GO:0051346"}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: GO:0070588
data:
  {"annotated_genes":["SJAG_03873","SJAG_02532","SJAG_04028","SJAG_02019","SJAG_03399","SJAG_01400","SJAG_04757","SJAG_04551","SJAG_01090","SJAG_02877","SJAG_03850","SJAG_05229","SJAG_04096","SJAG_03895","SJAG_04698","SJAG_02440","SJAG_03631","SJAG_00321","SJAG_04668","SJAG_00296","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72350,73271,77241,90394,91020,91545,97093,104675],"is_not":false,"summary":null,"term":"GO:0070588"},{"annotations":[91198,92892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[109624,73870,87968,88017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[110698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[86846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86864,108571],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[97585],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[72625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[103984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_03895":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"calcium ion membrane transport","type":"exact"},{"name":"transmembrane calcium transport","type":"exact"}],"termid":"GO:0070588","terms_by_termid":{"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: MOD:00655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an myristoylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoylated residue","termid":"MOD:00438"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-myristoylated residue","synonyms":[{"name":"SMyrRes","type":"exact"}],"termid":"MOD:00655"}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-7,8,13,14-tetrahydroprotoberberine = S-adenosyl-L-homocysteine + cis-N-methyl-(S)-7,8,13,14-tetrahydroprotoberberine.","definition_xrefs":["EC:2.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["RHEA:12805","MetaCyc:2.1.1.122-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: GO:0036280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-canavanine stimulus. L-canavanine is L-homoserine substituted at oxygen with a guanidino (carbamimidamido) group.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-canavanine","termid":"GO:1901354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-canavanine","termid":"GO:0036280"}


id: GO:0072147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular parietal epithelial cell. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport. These cells may also give rise to podocytes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"},{"relation_name":"part_of","term_name":"glomerular parietal epithelial cell differentiation","termid":"GO:0072139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular parietal epithelial cell fate commitment","synonyms":[{"name":"Bowman's capsule cell fate commitment","type":"exact"}],"termid":"GO:0072147"}


id: GO:0006852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial sodium/calcium ion exchange (obsolete GO:0006852)","synonyms":[{"name":"mitochondrial sodium/calcium exchange","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"exact"}],"termid":"GO:0006852"}


id: PBO:0036222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_rDNA","termid":"PBO:0036222"}


id: PBO:0041861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 7","termid":"PBO:0041861"}


id: PBO:0083459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene IFH1","termid":"PBO:0083459"}


id: PBO:0013028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex subunit Brr2","termid":"PBO:0013028"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114268],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: PBO:0054940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2354","termid":"PBO:0054940"}


id: PBO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10","termid":"PBO:0002212"}


id: GO:0065002
data:
  {"annotated_genes":["SJAG_02330","SJAG_03396","SJAG_00959","SJAG_03440","SJAG_02693","SJAG_02619","SJAG_01854","SJAG_00064","SJAG_00326","SJAG_00891","SJAG_05315","SJAG_01165","SJAG_03684","SJAG_02034","SJAG_03324","SJAG_02208","SJAG_02997","SJAG_02797","SJAG_00702","SJAG_02354","SJAG_02588","SJAG_04129"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72932,78822,73384,92877,72979,93579,103636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031204"},{"annotations":[73113,100607,63522,72121,70902,70319,92021,106638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[92501,73277,70929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[96773,112405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[103638,73386,74811,72981,93581,98005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_00959":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03396":null,"SJAG_03440":null,"SJAG_03684":null,"SJAG_04129":null,"SJAG_05315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"intracellular protein transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"intracellular membrane translocation of a protein","type":"exact"},{"name":"intracellular protein membrane transport","type":"exact"},{"name":"intracellular protein transport across a membrane","type":"exact"}],"termid":"GO:0065002","terms_by_termid":{"GO:0006616":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0031204":null}}


id: FYPO:0005899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is normal (i.e. indistinguishable from wild type). Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PMID:19570908","GO:0030048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of actin filament-based movement","synonyms":[{"name":"normal rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"normal rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005899"}


id: PBO:0039048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"advanced glycosylation end-product specific receptor","termid":"PBO:0039048"}


id: GO:0072136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a metanephric mesenchymal cell population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchymal cell proliferation","termid":"GO:0072135"},{"relation_name":"is_a","term_name":"cell proliferation involved in metanephros development","termid":"GO:0072203"},{"relation_name":"part_of","term_name":"metanephric mesenchyme development","termid":"GO:0072075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric mesenchymal cell proliferation involved in metanephros development","termid":"GO:0072136"}


id: PR:Q10355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02091","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C22E12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.02","secondary_identifiers":["UniProtKB:Q10355"],"synonyms":[{"name":"Spom972h-RBM7","type":"exact"}],"termid":"PR:Q10355"}


id: GO:0021949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The early migration of a precerebellar neuronal precursor in which a cell move from the rhombic lip, orthogonal to the direction of radial migration and ultimately reside in the brainstem.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","PMID:15157725","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain tangential cell migration","termid":"GO:0021934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brainstem precerebellar neuron precursor migration","termid":"GO:0021949"}


id: FYPO:0001458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"},{"relation_name":"is_a","term_name":"decreased histone H3 acetylation during vegetative growth","termid":"FYPO:0002362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K14 acetylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K14 acetylation during mitotic cell cycle","type":"related"},{"name":"decreased histone lysine H3 K14 acetylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001458"}


id: PBO:0087649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hat1p-Hat2p histone acetyltransferase complex; required for high affinity binding of the complex to free histone H4, thereby enhancing Hat1p activity; similar to human RbAp46 and 48; has a role in telomeric silencing","termid":"PBO:0087649"}


id: PR:O74558
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mob2 gene.","definition_xrefs":["UniProtKB:O74558","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maintenance of ploidy protein mob2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.04c","synonyms":[{"name":"Spom972h-mob2","type":"exact"}],"termid":"PR:O74558"}


id: PBO:0040518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 2","termid":"PBO:0040518"}


id: PBO:0069477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 744, pseudogene","termid":"PBO:0069477"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75550],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0016874","GO:0003824","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["Reactome:R-HSA-380224","MetaCyc:ARGININE--TRNA-LIGASE-RXN","Reactome:R-HSA-379993","RHEA:20301"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: GO:0072301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"}


id: PBO:0027836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septum_disassembly","termid":"PBO:0027836"}


id: GO:0046540
data:
  {"annotated_genes":["SJAG_01327","SJAG_02304","SJAG_03410","SJAG_03369","SJAG_03954","SJAG_01870","SJAG_04222","SJAG_04529","SJAG_03070","SJAG_02469","SJAG_00414","SJAG_01308","SJAG_00989","SJAG_00147","SJAG_00531","SJAG_04405","SJAG_01301","SJAG_02279","SJAG_04497","SJAG_00643","SJAG_01634","SJAG_02843","SJAG_04433","SJAG_03469","SJAG_02455","SJAG_03460","SJAG_02295","SJAG_05240","SJAG_01819","SJAG_04538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70764,71038,71711,72546,73795,74979,76298,76346,76452,76580,77085,77329,77527,78038,78446,88715,90747,93541,94300,96095,97623,101196,101240,103856,105349,105895,106386,108099,110033,111545],"is_not":false,"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.","definition_xrefs":["PMID:11867543","GOC:pr","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"U4/U6.U5 snRNP complex","type":"exact"}],"termid":"GO:0046540","terms_by_termid":{"GO:0046540":null}}


id: PBO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type","termid":"PBO:0000416"}


id: MOD:01704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydrobutyrine, by neutral loss of methyl sulfide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Met)","synonyms":[{"name":"dHAbu(Met)","type":"exact"}],"termid":"MOD:01704"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: GO:0016444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recombination occurring within or between DNA molecules in somatic cells.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"somatic cell DNA recombination","termid":"GO:0016444"}


id: PBO:0071389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 12","termid":"PBO:0071389"}


id: GO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD+ = 3-methylbutanal + NADH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265","KEGG_REACTION:R05685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanol:NAD oxidoreductase activity","secondary_identifiers":["RHEA:18529"],"synonyms":[{"name":"3-methylbutanal reductase (NAD) activity","type":"exact"},{"name":"3-methylbutanol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NAD) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NAD) activity","type":"exact"}],"termid":"GO:0052676"}


id: PBO:0084114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase encoded by the Y' element of subtelomeric regions; highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0084114"}


id: GO:0140660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a motor protein.","definition_xrefs":["PMID:33221250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor regulator activity","termid":"GO:0140659"},{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"cytoskeletal motor activator activity","synonyms":[{"name":"motor activity activator activity","type":"broad"}],"termid":"GO:0140660"}


id: PBO:0041287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 12","termid":"PBO:0041287"}


id: GO:0047284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl D-xylosyl phosphate + protein = dolichol-phosphate + D-xylosylprotein.","definition_xrefs":["MetaCyc:2.4.2.33-RXN","EC:2.4.2.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"dolichyl-xylosyl-phosphate-protein xylosyltransferase activity","secondary_identifiers":["RHEA:18361"],"synonyms":[{"name":"dolichyl-D-xylosyl-phosphate:protein D-xylosyltransferase activity","type":"related"}],"termid":"GO:0047284"}


id: GO:0048812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a neuron projection are generated and organized. A neuron projection is any process extending from a neural cell, such as axons or dendrites.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection morphogenesis","termid":"GO:0120039"},{"relation_name":"part_of","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection morphogenesis","synonyms":[{"name":"neurite biosynthesis","type":"narrow"},{"name":"neurite formation","type":"narrow"},{"name":"neurite growth","type":"narrow"},{"name":"neurite morphogenesis","type":"related"}],"termid":"GO:0048812"}


id: GO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of exons from two different primary transcripts of messenger RNA (mRNA) via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.","definition_xrefs":["GOC:krc","ISBN:0879695897","PMID:18458335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA trans splicing, via spliceosome","synonyms":[{"name":"nuclear mRNA trans splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA trans splicing, via spliceosome","type":"exact"}],"termid":"GO:0000365"}


id: GO:0070218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of sulfide ions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfide ion homeostasis (obsolete GO:0070218)","synonyms":[{"name":"sulfide generation","type":"related"},{"name":"sulfide homeostasis","type":"exact"},{"name":"sulfide production","type":"related"},{"name":"sulphide generation","type":"related"},{"name":"sulphide homeostasis","type":"exact"},{"name":"sulphide ion homeostasis","type":"exact"},{"name":"sulphide production","type":"related"}],"termid":"GO:0070218"}


id: GO:1990362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanal + NADH + H+ => n-butanol + NAD+.","definition_xrefs":["PMID:1999395","RHEA:33199","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"butanol dehydrogenase activity","termid":"GO:1990362"}


id: PBO:0028462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_lemon-shaped_cell","termid":"PBO:0028462"}


id: GO:0034553
data:
  {"annotated_genes":["SJAG_03574","SJAG_07005","SJAG_01895","SJAG_00703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70820,76985,94752,102833],"is_not":false,"summary":null,"term":"GO:0034553"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex II, in the mitochondrial inner membrane.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"},{"relation_name":"is_a","term_name":"respiratory chain complex II assembly","termid":"GO:0034552"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00703":null,"SJAG_01895":null,"SJAG_03574":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003","GO:0007005"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0034553","terms_by_termid":{"GO:0034553":null}}


id: PBO:0067996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 298","termid":"PBO:0067996"}


id: GO:0035994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a myofibril being extended beyond its slack length.","definition_xrefs":["GOC:vk","PMID:14583192","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle stretch","termid":"GO:0035994"}


id: GO:1900744
data:
  {"annotated_genes":["SJAG_06621","SJAG_02135","SJAG_03185","SJAG_03893","SJAG_00027","SJAG_04825","SJAG_06622","SJAG_01199","SJAG_02183","SJAG_03903","SJAG_03828","SJAG_01587","SJAG_05000","SJAG_06592","SJAG_02013","SJAG_02000","SJAG_00318","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90607,94935,112188,113365,91535,87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[104252,90823,104255,113331,104256,104251,104254,104257,107067,104253,107708,112468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of p38MAPK cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"p38MAPK cascade","termid":"GO:0038066"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of p38MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of osmosensory signaling MAPK cascade","type":"narrow"},{"name":"regulation of p38 MAPK cascade","type":"exact"},{"name":"regulation of p38 cascade","type":"exact"}],"termid":"GO:1900744","terms_by_termid":{"GO:1900745":null,"GO:1903753":null}}


id: GO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactogen + UDP-galactose = 1,6-beta-D-galctosylgalactogen + UDP.","definition_xrefs":["EC:2.4.1.205","MetaCyc:2.4.1.205-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactogen 6-beta-galactosyltransferase activity","synonyms":[{"name":"1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:galactogen beta-1,6-D-galactosyltransferase activity","type":"related"},{"name":"beta-(1,6)-D-galactosyltransferase activity","type":"related"},{"name":"galactogen 6beta-galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-galactogen galactosyltransferase activity","type":"related"}],"termid":"GO:0047255"}


id: PBO:0034563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_iron-sulfur_cluster_binding","termid":"PBO:0034563"}


id: GO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: meso-2,6-diaminopimelate + H2O + NADP+ = L-2-amino-6-oxopimelate + H+ + NADPH + NH4.","definition_xrefs":["EC:1.4.1.16","RHEA:13561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diaminopimelate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02755","MetaCyc:DIAMINOPIMELATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"meso-2,6-diaminoheptanedioate:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"meso-alpha,epsilon-diaminopimelate dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate D-dehydrogenase activity","type":"related"},{"name":"meso-diaminopimelate dehydrogenase activity","type":"related"}],"termid":"GO:0047850"}


id: PBO:0042773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 83","termid":"PBO:0042773"}


id: GO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P4 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"P4 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019822"}


id: PBO:0061268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOVA1 divergent transcript","termid":"PBO:0061268"}


id: PBO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase Required for RNAi-mediated heterochromatin assembly Hrr1","termid":"PBO:0005733"}


id: PBO:0074422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 21","termid":"PBO:0074422"}


id: FYPO:0002710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which nuclei formed by the second meiotic nuclear division do not contain detectable spindle pole bodies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body absent from cell","termid":"FYPO:0002709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spindle pole body absent from cell after meiosis II","synonyms":[{"name":"SPB absent from cell after meiosis II","type":"exact"},{"name":"absent spindle pole body after meiosis II","type":"exact"},{"name":"absent spindle pole body after second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0002710"}


id: PBO:0091096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Dhm2","termid":"PBO:0091096"}


id: GO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with mRNP particles and RNA polymerase II and is proposed to integrate transcript elongation with the regulation of alternative splicing. In humans it is composed of the proteins KIAA1967/DBC1 and ZNF326/ZIRD.","definition_xrefs":["GOC:sp","PMID:22446626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DBIRD complex","termid":"GO:0044609"}


id: GO:0140672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and possibly H4. Shares the histone acetylation (HAT) module of GCN5/PCAF-ADA2-ADA3-SGF29 (or orthologs) with the related SAGA complex (GO:0000124). Contains HAT subunits GCN5 or PCAF in a mutually exclusive manner. In addition to the HAT module contains DR1/NC2B, KAT14, MBIP, WDR5, YEATS2 and ZZZ3 or orthologs. Also regulates the activity of non-histone targets and orchestrates mitotic progression by regulating Cyclin A degradation through acetylation.","definition_xrefs":["PMID:20562830","PMID:28966424","PMID:19936620","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATAC complex","synonyms":[{"name":"ADA2A-containing complex","type":"exact"},{"name":"Ada Two-A containing complex","type":"exact"},{"name":"Ada two A containing complex","type":"exact"},{"name":"Ada-Two-A-containing complex","type":"exact"},{"name":"G-ATAC complex","type":"exact"},{"name":"KAT2A-containing ATAC complex","type":"exact"},{"name":"KAT2B-containing ATAC complex","type":"exact"}],"termid":"GO:0140672"}


id: PBO:0066823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 122","termid":"PBO:0066823"}


id: PBO:0088722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA demethylase","termid":"PBO:0088722"}


id: PBO:0049013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein M6A","termid":"PBO:0049013"}


id: PBO:0083636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3g subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; is essential for translation; stimulates resumption of ribosomal scanning during translation reinitiation; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083636"}


id: PBO:0090388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, calcineurin responsive Prz1","termid":"PBO:0090388"}


id: PBO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0018059"}


id: GO:0033027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of mast cell apoptotic process","termid":"GO:0033025"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"mast cell apoptotic process","termid":"GO:0033024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell apoptotic process","synonyms":[{"name":"activation of mast cell apoptosis","type":"narrow"},{"name":"positive regulation of mast cell apoptosis","type":"narrow"},{"name":"stimulation of mast cell apoptosis","type":"narrow"},{"name":"up regulation of mast cell apoptosis","type":"exact"},{"name":"up-regulation of mast cell apoptosis","type":"exact"},{"name":"upregulation of mast cell apoptosis","type":"exact"}],"termid":"GO:0033027"}


id: SO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_region","synonyms":[{"name":"UTR region","type":"exact"}],"termid":"SO:0000837"}


id: MOD:01335
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:16526082","Unimod:464#K","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00880"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized lysine","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:01335"}


id: PBO:0068054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 359","termid":"PBO:0068054"}


id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: GO:0033535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ajugose, the hexasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah","MetaCyc:CPD-8066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ajugose metabolic process","synonyms":[{"name":"ajugose metabolism","type":"exact"}],"termid":"GO:0033535"}


id: GO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency of heart contraction of another organism.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:20923766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heart rate","termid":"GO:0010459"},{"relation_name":"is_a","term_name":"modulation of heart rate in another organism","termid":"GO:0044554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart rate in another organism","synonyms":[{"name":"negative regulation of heart rate in other organism","type":"exact"}],"termid":"GO:0044555"}


id: GO:0010255
data:
  {"annotated_genes":["SJAG_02481","SJAG_00610","SJAG_00472","SJAG_03081","SJAG_00266","SJAG_04551","SJAG_00424","SJAG_04312","SJAG_02311","SJAG_02426","SJAG_01254","SJAG_01245","SJAG_01699","SJAG_04026","SJAG_00574","SJAG_01754","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101267,101850,104821,102202,111694,89816,104321,110669,97292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[88367,95911,111525,87712,103306],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110034"},{"annotations":[97583,85150,98267],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902660"}]},"cv_name":"biological_process","definition":"The process in which a change in the level of mono- and disaccharide glucose trigger the expression of genes controlling metabolic and developmental processes.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose mediated signaling","termid":"GO:0009757"},{"relation_name":"part_of","term_name":"cellular response to glucose stimulus","termid":"GO:0071333"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00424":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00610":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"glucose mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glucose mediated signalling","type":"exact"}],"termid":"GO:0010255","terms_by_termid":{"GO:0010619":null,"GO:0110034":null,"GO:1902660":null}}


id: GO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitroalkane + H2O + O2 = an aldehyde or ketone + nitrite + H2O2.","definition_xrefs":["EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitroalkane oxidase activity","secondary_identifiers":["KEGG_REACTION:R00799","MetaCyc:RXN-11045"],"synonyms":[{"name":"NAO activity","type":"related"},{"name":"nitroalkane reductase activity","type":"related"},{"name":"nitroalkane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0052664"}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: PBO:0083727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 18S rRNA dimethylase (dimethyladenosine transferase); responsible for conserved m6(2)Am6(2)A dimethylation in 3'-terminal loop of 18S rRNA, part of 90S and 40S pre-particles in nucleolus, involved in pre-ribosomal RNA processing; human homolog DIMT1 complements yeast dim1 mutant","termid":"PBO:0083727"}


id: PR:O13771
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- glc8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.09c","synonyms":[{"name":"Spom972h-glc8","type":"exact"}],"termid":"PR:O13771"}


id: PBO:0042868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 pseudogene 1","termid":"PBO:0042868"}


id: PBO:0091821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane spermine family transmembrane transporter Caf5","termid":"PBO:0091821"}


id: GO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diphosphoglycerate (DPG) + ATP = cyclic 2,3-diphosphoglycerate (cDPG) + ADP + phosphate.","definition_xrefs":["GOC:crds","PMID:2226838","PMID:8320225","PMID:9811660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"cyclic 2,3-diphosphoglycerate synthetase activity","synonyms":[{"name":"CPGS activity","type":"exact"},{"name":"cDPGS activity","type":"exact"}],"termid":"GO:0036356"}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: PBO:0041430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 82","termid":"PBO:0041430"}


id: PBO:0066750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 48","termid":"PBO:0066750"}


id: FYPO:0004479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah","PMID:16928959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to salt stress","synonyms":[{"name":"decreased transcription from CDRE promoter during cellular response to salt stress","type":"exact"},{"name":"decreased transcription from CDRE promoter in response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to salt stress during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to salt stress","type":"exact"}],"termid":"FYPO:0004479"}


id: PBO:0049369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2 pseudogene 1","termid":"PBO:0049369"}


id: PBO:0061489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor interacting protein 2","termid":"PBO:0061489"}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: PBO:0073363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family G member 1","termid":"PBO:0073363"}


id: GO:0047797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + cyclohexanone = AH(2) + cyclohex-2-enone.","definition_xrefs":["EC:1.3.99.14","RHEA:21780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexanone dehydrogenase activity","secondary_identifiers":["MetaCyc:CYCLOHEXANONE-DEHYDROGENASE-RXN","KEGG_REACTION:R02234"],"synonyms":[{"name":"cyclohexanone:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"cyclohexanone:acceptor 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047797"}


id: GO:0008120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine.","definition_xrefs":["EC:2.4.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"ceramide glucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1638104","MetaCyc:CERAMIDE-GLUCOSYLTRANSFERASE-RXN","RHEA:12088"],"synonyms":[{"name":"UDP-glucose-ceramide glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:ceramide glucosyltransferase activity","type":"related"},{"name":"UDPglucose:N-acylsphingosine D-glucosyltransferase activity","type":"related"},{"name":"ceramide:UDP-glucose glucosyltransferase activity","type":"related"},{"name":"ceramide:UDPGlc glucosyltransferase activity","type":"related"},{"name":"glucosylceramide synthase activity","type":"related"},{"name":"uridine diphosphoglucose-ceramide glucosyltransferase activity","type":"related"}],"termid":"GO:0008120"}


id: PBO:0049011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and KOW motifs","termid":"PBO:0049011"}


id: PBO:0029434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_septated_vegetative_cell","termid":"PBO:0029434"}


id: GO:0045292
data:
  {"annotated_genes":["SJAG_03890","SJAG_05009","SJAG_00076","SJAG_00888","SJAG_00446","SJAG_00094","SJAG_00531","SJAG_04694","SJAG_05211","SJAG_05349","SJAG_04293","SJAG_05926","SJAG_00639","SJAG_01301","SJAG_03966","SJAG_00818","SJAG_05240","SJAG_02227","SJAG_04230","SJAG_02304","SJAG_02722","SJAG_01654","SJAG_00147","SJAG_01015","SJAG_03687","SJAG_01327","SJAG_03369","SJAG_03279","SJAG_03238","SJAG_02558","SJAG_04497","SJAG_00571","SJAG_00322","SJAG_04117","SJAG_01511","SJAG_01852","SJAG_01547","SJAG_01200","SJAG_00058","SJAG_02686","SJAG_05208","SJAG_04071","SJAG_03291","SJAG_01819","SJAG_03301","SJAG_01008","SJAG_02862","SJAG_01452","SJAG_03460","SJAG_01958","SJAG_00577","SJAG_02687","SJAG_04949","SJAG_04911","SJAG_03112","SJAG_01152","SJAG_02455","SJAG_05212","SJAG_04163","SJAG_04405","SJAG_03894","SJAG_00504","SJAG_00249","SJAG_03993","SJAG_01064","SJAG_04782","SJAG_03210","SJAG_02469","SJAG_02083","SJAG_03469","SJAG_03245","SJAG_00911","SJAG_03070","SJAG_00414","SJAG_02005","SJAG_04914","SJAG_01629","SJAG_00363","SJAG_04079","SJAG_01308","SJAG_04898","SJAG_03995","SJAG_04589","SJAG_02018","SJAG_02843","SJAG_02396","SJAG_03849","SJAG_00859","SJAG_02844","SJAG_02317","SJAG_02688","SJAG_00539","SJAG_01810","SJAG_04529","SJAG_00643","SJAG_04214","SJAG_01408","SJAG_01214","SJAG_01040","SJAG_00313","SJAG_01870","SJAG_05235","SJAG_03983","SJAG_02279","SJAG_02772","SJAG_03498","SJAG_02905","SJAG_01144","SJAG_03601","SJAG_01504","SJAG_05025","SJAG_01557","SJAG_16453","SJAG_01440","SJAG_03937","SJAG_02879","SJAG_03547","SJAG_03711","SJAG_03430","SJAG_02185","SJAG_05224","SJAG_04222","SJAG_03954","SJAG_00809","SJAG_02078","SJAG_03427","SJAG_04783","SJAG_00989","SJAG_01634","SJAG_03410","SJAG_04433","SJAG_00225","SJAG_04025","SJAG_04318","SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77086,78091,83200,83543,84260,84716,85183,87061,87431,87726,87985,88274,88294,88300,88500,88654,88716,89191,90309,90570,90900,90942,91363,91515,91541,91766,91881,91993,92386,92939,93205,93543,93961,94302,96157,97194,97847,97904,98067,98127,98438,98571,98620,100071,100326,100996,101010,101197,102994,103227,103569,103859,104181,104848,105078,105340,105785,106529,107875,108102,108313,108380,108666,109050,109543,109549,110034,110368,111107,111548,111998,112141,112318,113048,113597,113757,113923,70580,70689,71040,71257,71713,71855,71935,72142,72657,72759,72988,73043,73619,73753,73796,73800,74068,74091,74174,74409,75131,75189,75237,75760,76089,76301,76347,76360,76582,76767,76890,77202,77532,78042,78080,78450,78505,78733,90754],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[112911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[90501,107596,91169,98131,105896,105350,101242,105910,93366,97973,90749,78108,89603,110405,108485,87201],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[113464],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[94084],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["ISBN:0879695897","PMID:18458335","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via 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cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"splicing","type":"broad"}],"termid":"GO:0045292","terms_by_termid":{"GO:0000354":null,"GO:0000395":null,"GO:0045292":null,"GO:1905744":null,"GO:1905746":null}}


id: PBO:0074789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 10","termid":"PBO:0074789"}


id: PBO:0049323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2A1 antisense RNA 1","termid":"PBO:0049323"}


id: GO:1901440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyalkanoate).","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic substance metabolic process","termid":"GO:0071704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) metabolic process","synonyms":[{"name":"poly(hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:1901440"}


id: GO:0071369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethylene (ethene) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ethylene","termid":"GO:0009723"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ethylene stimulus","synonyms":[{"name":"cellular response to ethene stimulus","type":"exact"}],"termid":"GO:0071369"}


id: PBO:0062443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 108 pseudogene","termid":"PBO:0062443"}


id: PBO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 2","termid":"PBO:0046154"}


id: PBO:0005256
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.7","termid":"PBO:0005256"}


id: GO:0043887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: melibiose(out) + Na+(out) = melibiose(in) + Na+(in).","definition_xrefs":["PMID:1970646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"melibiose:monoatomic cation symporter activity","termid":"GO:0015487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"melibiose:sodium symporter activity","synonyms":[{"name":"MelB","type":"related"},{"name":"Na+ (Li+)/melibiose symporter activity","type":"exact"},{"name":"Na+-melibiose symporter activity","type":"exact"},{"name":"Na+/melibiose symporter activity","type":"exact"},{"name":"Na+:melibiose symporter activity","type":"exact"},{"name":"melibiose carrier protein","type":"related"},{"name":"melibiose permease","type":"broad"},{"name":"melibiose-Na+ symporter activity","type":"exact"},{"name":"melibiose-sodium symporter activity","type":"exact"},{"name":"melibiose/Na+ symporter activity","type":"exact"},{"name":"melibiose/sodium symporter activity","type":"exact"},{"name":"melibiose:Na+ symporter activity","type":"exact"},{"name":"sodium-melibiose symporter activity","type":"exact"},{"name":"sodium/melibiose symporter activity","type":"exact"},{"name":"sodium:melibiose symporter activity","type":"exact"},{"name":"thiomethylgalactoside permease II","type":"related"}],"termid":"GO:0043887"}


id: PR:Q12704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04517","PANTHER:PTHR10267:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.22","secondary_identifiers":["UniProtKB:Q12704"],"synonyms":[{"name":"Spom972h-POLG","type":"exact"},{"name":"mitochondrial DNA polymerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12704"}


id: PBO:0064059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 93","termid":"PBO:0064059"}


id: PBO:0008948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RIP1","termid":"PBO:0008948"}


id: GO:0090579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule.","definition_xrefs":["PMID:15950878","GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete dsDNA loop formation (obsolete GO:0090579)","synonyms":[{"name":"chromatin looping","type":"related"},{"name":"dsDNA looping","type":"exact"}],"termid":"GO:0090579"}


id: SO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 18th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K18_acetylation_site","synonyms":[{"name":"H3K18 acetylation site","type":"exact"},{"name":"H3K18ac","type":"exact"}],"termid":"SO:0001718"}


id: GO:0045729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of elevated metabolic activity, during which oxygen consumption increases, that occurs at fertilization. An enhanced uptake of oxygen leads to the production of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals. Capacitation, a necessary prerequisite event to successful fertilization, can be induced by reactive oxygen species in vitro; hydrogen peroxide is used as an extracellular oxidant to cross-link the protective surface envelopes.","definition_xrefs":["ISBN:0198506732","PMID:2537493","PMID:9013127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst at fertilization","synonyms":[{"name":"metabolic burst at fertilization","type":"exact"},{"name":"oxidative burst at fertilization","type":"exact"}],"termid":"GO:0045729"}


id: PBO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR96","termid":"PBO:0000982"}


id: PATO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000351 macromolecular composition value (obsolete PATO:0000351)","termid":"PATO:0000351"}


id: PBO:0074740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 100","termid":"PBO:0074740"}


id: PBO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15","termid":"PBO:0090155"}


id: PBO:0054204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1584","termid":"PBO:0054204"}


id: PBO:0041919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 3","termid":"PBO:0041919"}


id: PBO:0079678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3A","termid":"PBO:0079678"}


id: PBO:0071093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 95","termid":"PBO:0071093"}


id: FYPO:0002163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall thickness during vegetative growth","termid":"FYPO:0006745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002946"],"is_obsolete":false,"name":"decreased cell wall thickness during vegetative growth","synonyms":[{"name":"decreased cell wall thickness during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness during vegetative growth","type":"exact"},{"name":"thin cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002163"}


id: GO:0046594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of maintaining mRNA in a specific location in the oocyte pole plasm. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:tb","GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"maintenance of RNA location","termid":"GO:0051237"},{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"pole plasm mRNA localization","termid":"GO:0019094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maintenance of pole plasm mRNA location","secondary_identifiers":["GO:0048122"],"synonyms":[{"name":"maintenance of oocyte pole plasm mRNA localization","type":"exact"},{"name":"maintenance of pole plasm mRNA localization","type":"related"}],"termid":"GO:0046594"}


id: GO:0102247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 a malonyl-[acp] = 2 carbon dioxide + an acetoacetyl-[acp] + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"malonyl-malonyl acyl carrier protein-condensing enzyme activity","secondary_identifiers":["MetaCyc:RXN-12361"],"termid":"GO:0102247"}


id: GO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a xenobiotic, a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to xenobiotic stimulus","termid":"GO:0009410"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to xenobiotic stimulus","secondary_identifiers":["GO:0035690"],"synonyms":[{"name":"cellular response to drug","type":"related"}],"termid":"GO:0071466"}


id: GO:0090554
data:
  {"annotated_genes":["SJAG_02897","SJAG_01731","SJAG_00669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90020,93464,95670],"is_not":false,"summary":null,"term":"GO:0090554"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:ab","PMID:16452632","RHEA:38583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine transporter activity","termid":"GO:0008525"},{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_01731":null,"SJAG_02897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"phosphatidylcholine floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent phosphatidylcholine transporter activity","type":"broad"},{"name":"ATPase-coupled phosphatidylcholine transporter activity","type":"broad"},{"name":"phosphatidylcholine floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"phosphatidylcholine-translocating ATPase activity","type":"broad"}],"termid":"GO:0090554","terms_by_termid":{"GO:0090554":null}}


id: PBO:0087316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small subunit of the heterodimeric cap binding complex with Sto1p; interacts with Npl3p, possibly to package mRNA for export from the nucleus; may have a role in telomere maintenance; contains an RNA-binding motif","termid":"PBO:0087316"}


id: FYPO:0005250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to caesium ions. Cells stop growing (and may die) at a concentration of caesium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to caesium","synonyms":[{"name":"hypersensitive to caesium","type":"exact"},{"name":"sensitive to caesium during mitotic cell cycle","type":"related"},{"name":"sensitive to caesium during vegetative growth","type":"exact"},{"name":"sensitive to caesium ions","type":"exact"},{"name":"sensitive to cesium","type":"exact"}],"termid":"FYPO:0005250"}


id: GO:0047500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-borneol + NAD+ = (1R, 4R)-camphor + H+ + NADH.","definition_xrefs":["EC:1.1.1.198","RHEA:17329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(+)-borneol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R02944","MetaCyc:+-BORNEOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(+)-borneol:NAD+ oxidoreductase activity","type":"related"},{"name":"bicyclic monoterpenol dehydrogenase activity","type":"related"}],"termid":"GO:0047500"}


id: PBO:0051388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 5 (pseudogene)","termid":"PBO:0051388"}


id: GO:0006941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within striated muscle tissue, resulting in the shortening of the muscle. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope.","definition_xrefs":["GOC:jl","ISBN:0198506732","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction","synonyms":[{"name":"sarcomeric muscle contraction","type":"exact"}],"termid":"GO:0006941"}


id: GO:1901968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of polynucleotide 3'-phosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:23316050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatase activity","termid":"GO:0010921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of polynucleotide 3'-phosphatase activity","synonyms":[{"name":"regulation of 2'(3')-polynucleotidase activity","type":"exact"},{"name":"regulation of 5'-polynucleotidekinase 3'-phosphatase activity","type":"exact"},{"name":"regulation of DNA 3'-phosphatase activity","type":"exact"},{"name":"regulation of deoxyribonucleate 3'-phosphatase activity","type":"exact"},{"name":"regulation of polynucleotide 3'-phosphohydrolase activity","type":"exact"}],"termid":"GO:1901968"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: PBO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 39","termid":"PBO:0039542"}


id: PBO:0064128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor alpha","termid":"PBO:0064128"}


id: PBO:0088229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0088229"}


id: PBO:0001399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.16.1.18","termid":"PBO:0001399"}


id: GO:0022619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a generative cell. The generative cell gives rise to the sperm cells in the male gametophyte.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generative cell differentiation","termid":"GO:0022619"}


id: GO:0047676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + ATP + CoA = AMP + arachidonoyl-CoA + diphosphate + H+.","definition_xrefs":["RHEA:19713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid-CoA ligase activity","termid":"GO:0004467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"arachidonate-CoA ligase activity","secondary_identifiers":["EC:6.2.1.15","MetaCyc:ARACHIDONATE--COA-LIGASE-RXN","KEGG_REACTION:R01598"],"synonyms":[{"name":"arachidonate:CoA ligase (AMP-forming)","type":"related"},{"name":"arachidonoyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047676"}


id: GO:1904524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA amplification.","definition_xrefs":["GOC:TermGenie","PMID:26195783","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA amplification","termid":"GO:1904523"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"DNA amplification","termid":"GO:0006277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA amplification","synonyms":[{"name":"down regulation of DNA amplification","type":"exact"},{"name":"down-regulation of DNA amplification","type":"exact"},{"name":"downregulation of DNA amplification","type":"exact"},{"name":"inhibition of DNA amplification","type":"narrow"}],"termid":"GO:1904524"}


id: GO:1990438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition a methyl group to the 2'-oxygen atom of a nucleotide residue in an U6 snRNA molecule.","definition_xrefs":["PMID:9844635","PMID:11842100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA 2'-O-methylation","termid":"GO:1990437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"U6 2'-O-snRNA methylation","termid":"GO:1990438"}


id: GO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of phospho-guanosine to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein nucleotidylation","termid":"GO:0018175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein guanylylation","synonyms":[{"name":"protein amino acid guanylylation","type":"exact"}],"termid":"GO:0018260"}


id: GO:0033486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of delphinidin 3-O-glucoside, a basic, water-soluble anthocyanin responsible for blue coloration of flowers and fruits.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"delphinidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"delphinidin 3-O-glucoside anabolism","type":"exact"},{"name":"delphinidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"delphinidin 3-O-glucoside formation","type":"exact"},{"name":"delphinidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033486"}


id: PBO:0076910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor A, mitochondrial pseudogene 2","termid":"PBO:0076910"}


id: PBO:0041553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 25","termid":"PBO:0041553"}


id: PBO:0089372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1","termid":"PBO:0089372"}


id: GO:0102557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (20S)-protopanaxadiol + O2 + NADPH(4-) + H+ = protopanaxatriol + NADP + H2O.","definition_xrefs":["EC:1.14.14.121","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protopanaxadiol 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14978","RHEA:22272"],"termid":"GO:0102557"}


id: PBO:0063134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated transcript 1","termid":"PBO:0063134"}


id: GO:0044182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape.","definition_xrefs":["GOC:mtg_cambridge_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}


id: PBO:0066424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-glutamic acid dipeptide repeats","termid":"PBO:0066424"}


id: GO:0019768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"high-affinity IgE receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019768"}


id: FYPO:0009086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of lithium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of lithium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"hypersensitive to lithium chloride and SDS","type":"exact"},{"name":"hypersensitive to lithium chloride and sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to lithium chloride and SDS","type":"exact"},{"name":"sensitive to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and SDS in combination","type":"exact"},{"name":"sensitive to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"}],"termid":"FYPO:0009086"}


id: GO:0015139
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92112],"is_not":false,"summary":null,"term":"GO:0015139"}]},"cv_name":"molecular_function","definition":"Enables the transfer of alpha-ketoglutarate from one side of a membrane to the other. Alpha-ketoglutarate (or oxoglutarate) is a compound with important roles in carbohydrate and amino acid metabolism, especially in transamination reactions and as a component of the TCA cycle.","definition_xrefs":["ISBN:0198547684","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"alpha-ketoglutarate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372480"],"synonyms":[{"name":"2-oxoglutarate transporter activity","type":"exact"}],"termid":"GO:0015139","terms_by_termid":{"GO:0015139":null}}


id: GO:0036081
data:
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id: PBO:0039742
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id: PR:P78804
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id: PBO:0065967
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id: GO:0031120
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id: GO:0016462
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