# terms

id: PBO:0082199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082199"}


id: PBO:0063342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEST containing nuclear protein pseudogene 2","termid":"PBO:0063342"}


id: GO:0043602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of nitrates, inorganic or organic salts and esters of nitric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"cellular nitrogen compound catabolic process","termid":"GO:0044270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"nitrate catabolic process","synonyms":[{"name":"nitrate disassimilation","type":"exact"},{"name":"nitrate dissimilation","type":"exact"}],"termid":"GO:0043602"}


id: PBO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 5","termid":"PBO:0045066"}


id: PBO:0056486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 3","termid":"PBO:0056486"}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: PBO:0047622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fidgetin like 1","termid":"PBO:0047622"}


id: PBO:0011116
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein LIc","termid":"PBO:0011116"}


id: GO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-L-3-hydroxyproline = 1-pyrroline-2-carboxylate + H2O + H+.","definition_xrefs":["EC:4.2.1.77","RHEA:10320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase activity","secondary_identifiers":["KEGG_REACTION:R04374","MetaCyc:TRANS-L-3-HYDROXYPROLINE-DEHYDRATASE-RXN"],"synonyms":[{"name":"trans-L-3-hydroxyproline hydro-lyase (Delta1-pyrroline 2-carboxylate-forming)","type":"related"},{"name":"trans-L-3-hydroxyproline hydro-lyase activity","type":"related"}],"termid":"GO:0050346"}


id: PBO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase (predicted)","termid":"PBO:0001244"}


id: PBO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.-","termid":"PBO:0005352"}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: GO:1905106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Dizocilpine stimulus.","definition_xrefs":["GOC:TermGenie","PMID:20064280","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete response to Dizocilpine (obsolete GO:1905106)","termid":"GO:1905106"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00880","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: GO:0102290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + O2 + NADPH + H+ = 11alpha-hydroxy-beta-amyrin + H2O + NADP.","definition_xrefs":["EC:1.14.14.152","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"beta-amyrin monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-12681","RHEA:31715"],"termid":"GO:0102290"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: PBO:0041116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain specific homeobox","termid":"PBO:0041116"}


id: GO:0097001
data:
  {"annotated_genes":["SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112609],"is_not":false,"summary":null,"term":"GO:0097001"}]},"cv_name":"molecular_function","definition":"Binding to a ceramide, a class of lipids composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ceramide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097001","terms_by_termid":{"GO:0097001":null}}


id: PBO:0042080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 148","termid":"PBO:0042080"}


id: PBO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fip1","termid":"PBO:0000366"}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: PBO:0069994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1289, pseudogene","termid":"PBO:0069994"}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: GO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:expert_pt","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle remodeling","synonyms":[{"name":"HDL remodeling","type":"exact"},{"name":"HDL remodelling","type":"exact"},{"name":"high-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034375"}


id: PR:Q92375
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04025","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.03","secondary_identifiers":["UniProtKB:Q92375"],"synonyms":[{"name":"Spom972h-trxB","type":"exact"},{"name":"caffeine resistance protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92375"}


id: PBO:0076487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 2","termid":"PBO:0076487"}


id: GO:0002652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002652"}


id: PBO:0068599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 50, pseudogene","termid":"PBO:0068599"}


id: GO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside biosynthetic process","termid":"GO:0046132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytidine biosynthetic process","synonyms":[{"name":"cytidine anabolism","type":"exact"},{"name":"cytidine biosynthesis","type":"exact"},{"name":"cytidine formation","type":"exact"},{"name":"cytidine synthesis","type":"exact"}],"termid":"GO:0046088"}


id: GO:0048159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the oocyte has a nucleus slightly larger than those of the adjacent cells and is surrounded by a layer of loose squamous epithelial cells.","definition_xrefs":["ISBN:0198542771","GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary oocyte stage","synonyms":[{"name":"mammalian oogenesis stage 2","type":"exact"}],"termid":"GO:0048159"}


id: PBO:0047536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 2","termid":"PBO:0047536"}


id: GO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 27 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["GOC:sp","PMID:20622853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0032452","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3K27me2/H3K27me3 demethylase activity","secondary_identifiers":["Reactome:R-HSA-5617431","Reactome:R-HSA-3222593","Reactome:R-HSA-9822985","RHEA:60224","Reactome:R-HSA-5617887","Reactome:R-HSA-9822914","EC:1.14.11.68"],"synonyms":[{"name":"histone H3-tri/di-methyl-lysine-27 demethylase activity","type":"exact"},{"name":"histone H3K27me2 demethylase activity","type":"related"},{"name":"histone H3K27me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K27 specific)","type":"broad"}],"termid":"GO:0071558"}


id: PBO:0069694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 973, pseudogene","termid":"PBO:0069694"}


id: FYPO:0003876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis after mitosis checkpoint of a mitotic cell cycle is normal (i.e. indistinguishable from wild type). The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001312","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal cytokinesis checkpoint","synonyms":[{"name":"normal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"normal cytokinesis checkpoint activation","type":"related"},{"name":"normal mitotic cell cycle cytokinesis checkpoint","type":"exact"},{"name":"normally activated cytokinesis checkpoint","type":"related"}],"termid":"FYPO:0003876"}


id: PBO:0017814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter (predicted)","termid":"PBO:0017814"}


id: GO:0090582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).","definition_xrefs":["PMID:8626640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0022857","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity","termid":"GO:0090582"}


id: PBO:0069722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1003, pseudogene","termid":"PBO:0069722"}


id: PBO:0087150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent DExD/H-box ATPase; required for activation of spliceosome before first transesterification step in RNA splicing; implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome; ortholog of human protein DHX16","termid":"PBO:0087150"}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: PBO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 75","termid":"PBO:0052809"}


id: GO:0031417
data:
  {"annotated_genes":["SJAG_06449","SJAG_03215","SJAG_04131"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72236,100854,108006],"is_not":false,"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A conserved complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule that has a Met-Ile, Met-Leu, Met-Trp, or Met-Phe N-terminus. In Saccharomyces the complex includes Mak3p, Mak10p, and Mak31p.","definition_xrefs":["PMID:12890471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein acetyltransferase complex","termid":"GO:0031414"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03215":null,"SJAG_04131":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NatC complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"N-terminal acetyltransferase C complex","type":"exact"}],"termid":"GO:0031417","terms_by_termid":{"GO:0031417":null}}


id: SO:0000351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to decide a sequence of nucleotides, nucleotide analogs, or amino acids that has been designed by an experimenter and which may, or may not, correspond with any natural sequence.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthetic_sequence","synonyms":[{"name":"synthetic sequence","type":"exact"}],"termid":"SO:0000351"}


id: PBO:0085829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion localizes to the ER; YEL001C is non-essential; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0085829"}


id: SO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of an immunoglobuin (IG) gene.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_D_gene","synonyms":[{"name":"IGD_gene","type":"exact"},{"name":"Immunoglobulin_Diversity_ gene","type":"exact"},{"name":"immunoglobulin_D_gene","type":"exact"}],"termid":"SO:0002124"}


id: GO:0060037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharyngeal system development","termid":"GO:0060037"}


id: PBO:0047222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member B","termid":"PBO:0047222"}


id: PATO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's behavior aggregate of the responses or reactions or movements in a given situation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"behavioral quality","secondary_identifiers":["PATO:0001722"],"synonyms":[{"name":"behavioural quality","type":"exact"}],"termid":"PATO:0000186"}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:aruk","GOC:dph","GOC:sart","PMID:30280653","PMID:20080302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: GO:0016881
data:
  {"annotated_genes":["SJAG_01139","SJAG_02364","SJAG_03224","SJAG_03679","SJAG_01351","SJAG_01897","SJAG_00529","SJAG_00988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008841"},{"annotations":[76443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004357"},{"annotations":[70757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004363"},{"annotations":[72267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004592"},{"annotations":[77373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004632"},{"annotations":[76114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004639"},{"annotations":[78051,72179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004326"},{"annotations":[83990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004835"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_00988":null,"SJAG_01139":null,"SJAG_01351":null,"SJAG_01897":null,"SJAG_02364":null,"SJAG_03224":null,"SJAG_03679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acid-amino acid ligase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:6.3.2.-"],"synonyms":[{"name":"peptide synthase activity","type":"exact"}],"termid":"GO:0016881","terms_by_termid":{"GO:0004326":null,"GO:0004357":null,"GO:0004363":null,"GO:0004592":null,"GO:0004632":null,"GO:0004639":null,"GO:0004835":null,"GO:0008841":null}}


id: FYPO:0006743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to osmotic stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to osmotic stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during osmotic stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0006743"}


id: PBO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 11","termid":"PBO:0047660"}


id: PBO:0054609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2014","termid":"PBO:0054609"}


id: PBO:0075723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcalumenin","termid":"PBO:0075723"}


id: FYECO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which M-factor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ mating pheromone","termid":"FYECO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ M-factor","synonyms":[{"name":"M factor added","type":"exact"}],"termid":"FYECO:0000040"}


id: PBO:0089195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Stp1, unknown biological role","termid":"PBO:0089195"}


id: PBO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC37L1 divergent transcript","termid":"PBO:0042431"}


id: GO:1990933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the microtubule cytoskeleton is attached to the nuclear envelope.","definition_xrefs":["PMID:20507227","PMID:14655046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule cytoskeleton attachment to nuclear envelope","termid":"GO:1990933"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["PMID:16556257","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: GO:0035043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of a nuclear envelope containing nuclear pores and a lamina around the male pronucleus, the final step in sperm pronuclear formation.","definition_xrefs":["GOC:bf","PMID:11735001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronuclear envelope synthesis","termid":"GO:0018985"},{"relation_name":"part_of","term_name":"male pronucleus assembly","termid":"GO:0035039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"male pronuclear envelope synthesis","termid":"GO:0035043"}


id: PBO:0083979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosyl hydrolase required for beta-1,6-glucan biosynthesis; type II integral membrane protein that localizes to ER, plasma membrane, sites of polarized growth and secretory vesicles; functionally redundant with Skn1p; KRE6 has a paralog, SKN1, that arose from the whole genome duplication","termid":"PBO:0083979"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["EC:7.5.2.4","MetaCyc:3.6.3.40-RXN","GO:0015162"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: PBO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.23","termid":"PBO:0001671"}


id: PBO:0036319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human NEDD4 family-interacting protein ortholog (predicted)","termid":"PBO:0036319"}


id: PBO:0063435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 9","termid":"PBO:0063435"}


id: PBO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Shk1 kinase binding protein 5","termid":"PBO:0005327"}


id: GO:0005345
data:
  {"annotated_genes":["SJAG_03777","SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015207"},{"annotations":[107772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015208"},{"annotations":[78520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042907"}]},"cv_name":"molecular_function","definition":"Enables the transfer of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transmembrane transporter activity","termid":"GO:0015205"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"purine nucleobase transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"purine base transmembrane transporter activity","type":"exact"},{"name":"purine transmembrane transporter activity","type":"related"}],"termid":"GO:0005345","terms_by_termid":{"GO:0015207":null,"GO:0015208":null,"GO:0042907":null}}


id: PBO:0109359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109359"}


id: PBO:0034061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immediate_transformation_of","termid":"PBO:0034061"}


id: GO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the anther wall tapetum. This process pertains to the initial formation of a structure from unspecified parts. The anther wall tapetum is a layer of cells that provides a source of nutrition for the pollen grains as they mature.","definition_xrefs":["GOC:sm","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"},{"relation_name":"part_of","term_name":"anther wall tapetum morphogenesis","termid":"GO:0048655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum formation","synonyms":[{"name":"tapetal layer formation","type":"broad"},{"name":"tapetum formation","type":"broad"}],"termid":"GO:0048656"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: GO:0042015
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-20.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-20 binding","synonyms":[{"name":"IL-20 binding","type":"exact"}],"termid":"GO:0042015"}


id: PBO:0086810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YIR042C is a non-essential gene","termid":"PBO:0086810"}


id: FYPO:0000013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0005568","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"T-shaped vegetative cell with normal cell length","synonyms":[{"name":"T-shaped cell with normal cell length during vegetative growth","type":"exact"},{"name":"T-shaped vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"cell morphology, T shaped with normal cell length during vegetative growth","type":"exact"}],"termid":"FYPO:0000013"}


id: PBO:0049789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 24","termid":"PBO:0049789"}


id: GO:0015820
data:
  {"annotated_genes":["SJAG_03970","SJAG_00991","SJAG_03591","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83844],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[87374,94390,88931],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of leucine, 2-amino-4-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"leucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine transport","type":"narrow"}],"termid":"GO:0015820","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PBO:0083529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SIN4/YNL236W, a subunit of the mediator complex","termid":"PBO:0083529"}


id: PBO:0050019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DO beta","termid":"PBO:0050019"}


id: PBO:0046583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 25","termid":"PBO:0046583"}


id: PBO:0109371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6","termid":"PBO:0109371"}


id: PBO:0063618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3","termid":"PBO:0063618"}


id: PBO:0064020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 54","termid":"PBO:0064020"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: GO:0010076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism retains a population of floral meristem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of meristem identity","termid":"GO:0010074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral meristem identity","termid":"GO:0010076"}


id: PBO:0043594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIV alpha 1 chain","termid":"PBO:0043594"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["ISBN:0198542771","GOC:dph","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: GO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monosaccharide biosynthetic process","synonyms":[{"name":"monosaccharide anabolism","type":"exact"},{"name":"monosaccharide biosynthesis","type":"exact"},{"name":"monosaccharide formation","type":"exact"},{"name":"monosaccharide synthesis","type":"exact"}],"termid":"GO:0046364"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: GO:0044002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of nutrients from host","termid":"GO:0044002"}


id: GO:1901850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00072","GOC:yaf","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle metabolic process","termid":"GO:0046483"},{"relation_name":"is_a","term_name":"organic cyclic compound metabolic process","termid":"GO:1901360"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolism","type":"exact"},{"name":"coenzyme F0 metabolism","type":"exact"}],"termid":"GO:1901850"}


id: PBO:0083469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene PET130","termid":"PBO:0083469"}


id: PBO:0055533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2968","termid":"PBO:0055533"}


id: FYPO:0001712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of coenzyme Q10 measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular coenzyme Q10 level","termid":"FYPO:0006978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"coenzyme Q10 absent from cell","synonyms":[{"name":"UQ-10 absent from cell","type":"exact"},{"name":"coenzyme Q10 absent from cell during mitotic cell cycle","type":"related"},{"name":"coenzyme Q10 absent from cell during vegetative growth","type":"exact"},{"name":"ubiquinone 10 absent from cell","type":"exact"}],"termid":"FYPO:0001712"}


id: GO:1903283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione peroxidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutathione peroxidase activity","termid":"GO:1903282"},{"relation_name":"is_a","term_name":"negative regulation of peroxidase activity","termid":"GO:2000469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione peroxidase activity","synonyms":[{"name":"down regulation of GSH peroxidase activity","type":"exact"},{"name":"down regulation of glutathione peroxidase activity","type":"exact"},{"name":"down regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of GSH peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"down-regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"down-regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"down-regulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"downregulation of GSH peroxidase activity","type":"exact"},{"name":"downregulation of glutathione peroxidase activity","type":"exact"},{"name":"downregulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"downregulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"downregulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"downregulation of selenium-glutathione peroxidase activity","type":"exact"},{"name":"inhibition of GSH peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of glutathione:hydrogen-peroxide oxidoreductase activity","type":"narrow"},{"name":"inhibition of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of reduced glutathione peroxidase activity","type":"narrow"},{"name":"inhibition of selenium-glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of GSH peroxidase activity","type":"exact"},{"name":"negative regulation of glutathione:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"negative regulation of reduced glutathione peroxidase activity","type":"exact"},{"name":"negative regulation of selenium-glutathione peroxidase activity","type":"exact"}],"termid":"GO:1903283"}


id: GO:0018134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl glycine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0240"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via glycine oxazolecarboxylic acid (obsolete GO:0018134)","termid":"GO:0018134"}


id: PBO:0015655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3102","termid":"PBO:0015655"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: PBO:0016884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein","termid":"PBO:0016884"}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: GO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MCM complex, a hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["PMID:21813639","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"MCM complex assembly","termid":"GO:0072689"}


id: PBO:0004778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit F (predicted)","termid":"PBO:0004778"}


id: PBO:0040208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 1","termid":"PBO:0040208"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: GO:0061355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","PMID:19223472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"cell-cell signaling by wnt","termid":"GO:0198738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Wnt protein secretion","termid":"GO:0061355"}


id: GO:0042893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"polymyxin transport","termid":"GO:0042893"}


id: PBO:0015262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc1 (predicted)","termid":"PBO:0015262"}


id: PBO:0073772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 5","termid":"PBO:0073772"}


id: PATO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of whether the bearer exhibits the ability of a probe to react precisely with a specific target molecule.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specificity to","termid":"PATO:0002030"}


id: PBO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 19","termid":"PBO:0044336"}


id: PBO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein (predicted)","termid":"PBO:0000856"}


id: PBO:0057858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3169","termid":"PBO:0057858"}


id: PATO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the front of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed rostral","synonyms":[{"name":"splayed anterior","type":"exact"},{"name":"splayed superior (human torso)","type":"exact"}],"termid":"PATO:0002153"}


id: FYPO:0006321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at stalled replication forks is decreased.","definition_xrefs":["PomBase:mah","PMID:29215009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at stalled replication fork","synonyms":[{"name":"decreased protein localisation to chromatin at stalled replication fork during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at stalled replication fork during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromatin at stalled replication fork during vegetative growth","type":"exact"}],"termid":"FYPO:0006321"}


id: GO:1905316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a superior endocardial cushion is generated and organized.","definition_xrefs":["GOC:TermGenie","GO_REF:0000083","GOC:BHF","PMID:17050629","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior endocardial cushion morphogenesis","synonyms":[{"name":"dorsal endocardial cushion morphogenesis","type":"exact"}],"termid":"GO:1905316"}


id: PBO:0068901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 143, pseudogene","termid":"PBO:0068901"}


id: PR:000027617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UnMod","type":"exact"}],"termid":"PR:000027617"}


id: FYPO:0001080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased polysaccharide level during vegetative growth","synonyms":[{"name":"decreased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"decreased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"decreased polysaccharide level during mitotic cell cycle","type":"related"},{"name":"reduced polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001080"}


id: PBO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0035847"}


id: PBO:0045107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA meiotic recombinase 1","termid":"PBO:0045107"}


id: PBO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Swd3","termid":"PBO:0003241"}


id: GO:0043305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"negatively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell degranulation","synonyms":[{"name":"down regulation of mast cell degranulation","type":"exact"},{"name":"down-regulation of mast cell degranulation","type":"exact"},{"name":"downregulation of mast cell degranulation","type":"exact"},{"name":"inhibition of mast cell degranulation","type":"narrow"},{"name":"negative regulation of mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043305"}


id: PBO:0044080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 2","termid":"PBO:0044080"}


id: GO:1905325
data:
  {"annotated_genes":["SJAG_04259","SJAG_03327"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96801],"is_not":false,"summary":null,"term":"GO:1905325"},{"annotations":[108993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the meiosis I spindle assembly checkpoint.","definition_xrefs":["GOC:TermGenie","PMID:26483559","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiosis I","termid":"GO:0060631"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902102"},{"relation_name":"regulates","term_name":"meiosis I spindle assembly checkpoint signaling","termid":"GO:1905318"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03327":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"regulation of meiosis I spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905325","terms_by_termid":{"GO:1905325":null,"GO:1905326":null}}


id: GO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of natural killer cell tolerance induction","termid":"GO:0002871"},{"relation_name":"positively_regulates","term_name":"natural killer cell tolerance induction","termid":"GO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell tolerance induction","synonyms":[{"name":"activation of natural killer cell tolerance induction","type":"narrow"},{"name":"positive regulation of NK cell tolerance induction","type":"exact"},{"name":"stimulation of natural killer cell tolerance induction","type":"narrow"},{"name":"up regulation of natural killer cell tolerance induction","type":"exact"},{"name":"up-regulation of natural killer cell tolerance induction","type":"exact"},{"name":"upregulation of natural killer cell tolerance induction","type":"exact"}],"termid":"GO:0002873"}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: PBO:0060672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nedd4 family interacting protein 1 pseudogene 1","termid":"PBO:0060672"}


id: PBO:0078210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-3","termid":"PBO:0078210"}


id: PBO:0005116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transmembrane transporter family protein (predicted)","termid":"PBO:0005116"}


id: PBO:0038410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-characteristic_of_part_of","termid":"PBO:0038410"}


id: GO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which a three-stranded D-loop DNA is unwound or 'melted'.","definition_xrefs":["PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete triplex DNA unwinding (obsolete GO:0090703)","termid":"GO:0090703"}


id: PBO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 8","termid":"PBO:0060572"}


id: PBO:0083050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p; may contribute to regulation of protein degradation by deubiquitylating substrates that have been ubiquitylated by Ufd2p; member of the Ovarian Tumor (OTU) family; protein abundance increases in response to DNA replication stress","termid":"PBO:0083050"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: SO:0000678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 3' splice site that does not have the sequence \\\"AG\\\".","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_cis_splice_site","termid":"SO:0000164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_canonical_three_prime_splice_site","synonyms":[{"name":"non canonical 3' splice site","type":"related"},{"name":"non canonical three prime splice site","type":"exact"},{"name":"non-canonical three prime splice site","type":"exact"}],"termid":"SO:0000678"}


id: PR:000028989
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sterol regulatory element-binding protein that is a translation product of the Schizosaccharomyces pombe 972h- sre1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1-type sterol regulatory element-binding protein 1","synonyms":[{"name":"SRE-1","type":"related"},{"name":"SRE1","type":"related"},{"name":"SREBP1","type":"related"},{"name":"sre1","type":"exact"}],"termid":"PR:000028989"}


id: GO:0005555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group antigen (obsolete GO:0005555)","synonyms":[{"name":"blood group antigen","type":"exact"}],"termid":"GO:0005555"}


id: PBO:0084459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase involved in N-linked protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR2 has a paralog, YUR1, that arose from the whole genome duplication","termid":"PBO:0084459"}


id: GO:2000245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Ftsz-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"regulation of FtsZ-dependent cytokinesis","termid":"GO:2000244"},{"relation_name":"negatively_regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"negative regulation of prokaryote-type cytokinesis","type":"related"},{"name":"negative regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000245"}


id: PBO:0057131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 215","termid":"PBO:0057131"}


id: GO:0033214
data:
  {"annotated_genes":["SJAG_02834","SJAG_02735"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106051,106052],"is_not":false,"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"A process in which iron (Fe3+) is solubilized by ferric iron-specific chelators, known as siderophores, excreted by a cell; the iron-siderophore complex is then transported into the cell by specific cell surface receptors.","definition_xrefs":["GOC:mah","PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron import into cell","termid":"GO:0033212"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"iron coordination entity transport","termid":"GO:1901678"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"siderophore-dependent iron import into cell","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015688","GO:0033213"],"synonyms":[{"name":"iron assimilation by capture and transport","type":"related"},{"name":"iron assimilation by chelation and transport","type":"exact"},{"name":"iron chelate transport","type":"broad"}],"termid":"GO:0033214","terms_by_termid":{"GO:0033214":null}}


id: SO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are decreased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_decrease","synonyms":[{"name":"copy number decrease","type":"exact"}],"termid":"SO:0001912"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: GO:0070852
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron projection that is found in unipolar neurons and corresponds to the region between the cell body and the point at which the single projection branches.","definition_xrefs":["GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell body fiber","synonyms":[{"name":"cell body fibre","type":"exact"},{"name":"primary neurite","type":"related"}],"termid":"GO:0070852"}


id: PBO:0061739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2 pseudogene 1","termid":"PBO:0061739"}


id: GO:0051500
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73460],"is_not":false,"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tyrosyl-tRNA(Tyr) = D-tyrosine + tRNA(Tyr). Hydrolysis of the removal of D-tyrosine from tyrosine residues in charged tRNA.","definition_xrefs":["PMID:14527667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-aminoacyl-tRNA deacylase activity","termid":"GO:0051499"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016788","GO:0140101","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"D-tyrosyl-tRNA(Tyr) deacylase activity","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0051500","terms_by_termid":{"GO:0051500":null}}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: PBO:0080129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 8","termid":"PBO:0080129"}


id: GO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemangioblast. Hemangioblasts are the proposed common precursor of blood and endothelial lineages.","definition_xrefs":["GOC:bf","PMID:9670018","PMID:15378083","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"primitive hemopoiesis","termid":"GO:0060215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemangioblast cell differentiation","termid":"GO:0060217"}


id: PBO:0062462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 149 pseudogene","termid":"PBO:0062462"}


id: PR:P22068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit beta, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit beta, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.12c","secondary_identifiers":["UniProtKB:P22068"],"synonyms":[{"name":"Spom972h-ATP5B","type":"exact"}],"termid":"PR:P22068"}


id: GO:0007087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which nuclear pore complexes reform during mitotic cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear pore complex assembly","termid":"GO:0051292"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear membrane reassembly","termid":"GO:0007084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0007049","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"mitotic nuclear pore complex reassembly","termid":"GO:0007087"}


id: FYPO:0000970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mitomycin C. Cells stop growing (and may die) at a concentration of mitomycin C that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to mitomycin C","synonyms":[{"name":"hypersensitive to mitomycin C","type":"exact"},{"name":"sensitive to mitomycin C during mitotic cell cycle","type":"related"},{"name":"sensitive to mitomycin C during vegetative growth","type":"exact"}],"termid":"FYPO:0000970"}


id: PBO:0060101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 2","termid":"PBO:0060101"}


id: GO:0038192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by gastric inhibitory peptide (GIP) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","PMID:15955806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gastric inhibitory peptide signaling pathway","synonyms":[{"name":"GIP signaling","type":"exact"},{"name":"gastric inhibitory polypeptide receptor signaling pathway","type":"exact"},{"name":"glucose-dependent insulinotropic polypeptide signaling","type":"exact"}],"termid":"GO:0038192"}


id: GO:0036098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which an organism or tissue maintains a population of male germ-line stem cells.","definition_xrefs":["PMID:21752937","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line stem cell population maintenance","termid":"GO:0030718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell population maintenance","termid":"GO:0036098"}


id: PBO:0036483
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARGinine requiring","termid":"PBO:0036483"}


id: PR:Q9UUI9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22F8.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.03c","synonyms":[{"name":"Spom972h-SPAC22F8.03c","type":"exact"}],"termid":"PR:Q9UUI9"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: FYPO:0005120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is greater than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased RNA level during meiotic cell cycle","synonyms":[{"name":"increased RNA accumulation during meiotic cell cycle","type":"related"},{"name":"increased transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005120"}


id: PBO:0090426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase E","termid":"PBO:0090426"}


id: GO:0019055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Interactions, directly with the host cell macromolecular machinery, to allow a virus to modulate the rate of the host cell cycle to facilitate virus replication.","definition_xrefs":["ISBN:0781718325","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation by virus of host cell cycle regulation (obsolete GO:0019055)","synonyms":[{"name":"modification by virus of host cell cycle regulation","type":"exact"},{"name":"viral perturbation of cell cycle regulation","type":"exact"}],"termid":"GO:0019055"}


id: PBO:0059020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 9","termid":"PBO:0059020"}


id: PBO:0062623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily G member 2","termid":"PBO:0062623"}


id: PBO:0050637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 2","termid":"PBO:0050637"}


id: SO:0000790
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that is invalidated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated","termid":"SO:0000790"}


id: PBO:0040522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZGP1 pseudogene 2","termid":"PBO:0040522"}


id: PBO:0072319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 5","termid":"PBO:0072319"}


id: PBO:0065515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 1","termid":"PBO:0065515"}


id: GO:0006626
data:
  {"annotated_genes":["SJAG_03358","SJAG_04218","SJAG_01949","SJAG_00196","SJAG_01560","SJAG_02524","SJAG_00687","SJAG_01442","SJAG_00373","SJAG_02355","SJAG_01879","SJAG_02361","SJAG_03416","SJAG_00564","SJAG_04533","SJAG_02797","SJAG_00404","SJAG_03415","SJAG_04432","SJAG_02034","SJAG_00569","SJAG_04336","SJAG_02398","SJAG_03648","SJAG_01004","SJAG_01120","SJAG_02917","SJAG_01615","SJAG_02077","SJAG_04996","SJAG_01780","SJAG_01951","SJAG_07010","SJAG_03515","SJAG_04014","SJAG_03710","SJAG_02809","SJAG_02397","SJAG_01597","SJAG_03560","SJAG_04370","SJAG_04208","SJAG_01684","SJAG_01640","SJAG_04641","SJAG_03502","SJAG_05259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93918],"is_not":false,"summary":null,"term":"GO:0006626"},{"annotations":[77221,76032,76511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045041"},{"annotations":[84082,94923,95023,98116,101538,86561,100553,107042,90107,102939,111906,98690,92429,94745,105168,102853,102916,112344,110388,95792,85242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030150"},{"annotations":[102917,108408,98340,102940,111408,84394,74992,86080,73722,76815,73001],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045039"},{"annotations":[105672,107036,94095,70251,75732,102871,93754,102918,105333,103002,105682],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045040"},{"annotations":[75926,78539,78752,97645,77096,70151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards and into the mitochondrion, usually mediated by mitochondrial proteins that recognize signals contained within the imported protein.","definition_xrefs":["ISBN:0716731363","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00373":null,"SJAG_00404":null,"SJAG_00564":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01004":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01560":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01640":null,"SJAG_01684":null,"SJAG_01780":null,"SJAG_01879":null,"SJAG_01949":null,"SJAG_01951":null,"SJAG_02034":null,"SJAG_02077":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02397":null,"SJAG_02398":null,"SJAG_02524":null,"SJAG_02797":null,"SJAG_02809":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03648":null,"SJAG_03710":null,"SJAG_04014":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04370":null,"SJAG_04432":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein targeting to mitochondrion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0043681"],"synonyms":[{"name":"mitochondrial protein import","type":"related"},{"name":"mitochondrial translocation","type":"related"},{"name":"protein import into mitochondrion","type":"exact"},{"name":"protein targeting to mitochondria","type":"exact"},{"name":"protein-mitochondrial targeting","type":"exact"}],"termid":"GO:0006626","terms_by_termid":{"GO:0006626":null,"GO:0006627":null,"GO:0030150":null,"GO:0045039":null,"GO:0045040":null,"GO:0045041":null}}


id: PBO:0027617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_localization_to_mitotic_spindle_pole_body_following_normal_mitosis","termid":"PBO:0027617"}


id: PBO:0108912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 cohesin complex component","termid":"PBO:0108912"}


id: PBO:0056852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489","termid":"PBO:0056852"}


id: PBO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase Tcd1 (predicted)","termid":"PBO:0017560"}


id: PBO:0061501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of reactive oxygen species","termid":"PBO:0061501"}


id: PBO:0071540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 5","termid":"PBO:0071540"}


id: GO:0045960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the classical pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002925"},{"relation_name":"is_a","term_name":"regulation of complement activation, classical pathway","termid":"GO:0030450"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, classical pathway","termid":"GO:0006958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, classical pathway","synonyms":[{"name":"activation of complement activation, classical pathway","type":"narrow"},{"name":"positive regulation of complement cascade, classical pathway","type":"exact"},{"name":"stimulation of complement activation, classical pathway","type":"narrow"},{"name":"up regulation of complement activation, classical pathway","type":"exact"},{"name":"up-regulation of complement activation, classical pathway","type":"exact"},{"name":"upregulation of complement activation, classical pathway","type":"exact"}],"termid":"GO:0045960"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: GO:0047606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a hydroxynitrile = cyanide + an aldehyde or ketone.","definition_xrefs":["GOC:mah","PMID:3377504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"hydroxynitrilase activity","secondary_identifiers":["GO:0046991","https://github.com/geneontology/go-ontology/issues/16166","MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN","EC:4.1.2.47"],"synonyms":[{"name":"alpha-hydroxynitrile lyase activity","type":"narrow"},{"name":"hydroxynitrile lyase activity","type":"exact"},{"name":"oxynitrilase activity","type":"related"}],"termid":"GO:0047606"}


id: GO:0010436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative cleavage of carotenoids.","definition_xrefs":["PMID:16459333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carotenoid dioxygenase activity","synonyms":[{"name":"carotenoid-cleaving dioxygenase","type":"related"}],"termid":"GO:0010436"}


id: GO:0060599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch forms along the side of a mammary duct.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sprouting from an epithelium","termid":"GO:0060601"},{"relation_name":"part_of","term_name":"branching involved in mammary gland duct morphogenesis","termid":"GO:0060444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral sprouting involved in mammary gland duct morphogenesis","synonyms":[{"name":"mammary gland duct secondary branching","type":"exact"}],"termid":"GO:0060599"}


id: GO:0009344
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses nitrite reductase [NAD(P)H] activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrite reductase complex [NAD(P)H]","termid":"GO:0009344"}


id: PBO:0053726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 940","termid":"PBO:0053726"}


id: PBO:0029068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_nitric_oxide","termid":"PBO:0029068"}


id: PBO:0028443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_double-strand_break_formation_at_mating-type_locus","termid":"PBO:0028443"}


id: PBO:0053507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 491","termid":"PBO:0053507"}


id: PBO:0006172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell","termid":"PBO:0006172"}


id: PBO:0017735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1","termid":"PBO:0017735"}


id: GO:0035760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of a ribosomal RNA (rRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"},{"relation_name":"is_a","term_name":"polyadenylation-dependent ncRNA catabolic process","termid":"GO:0043634"},{"relation_name":"is_a","term_name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent rRNA catabolic process","synonyms":[{"name":"cytoplasmic poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0035760"}


id: PBO:0047586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3 pseudogene 6","termid":"PBO:0047586"}


id: GO:0052199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of enzyme activity in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of catalytic activity in other organism involved in symbiotic interaction (obsolete GO:0052199)","synonyms":[{"name":"down regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"down-regulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"downregulation of enzyme activity in other organism during symbiotic interaction","type":"related"},{"name":"inhibition of enzyme activity in other organism","type":"exact"},{"name":"inhibition of enzyme activity in other organism during symbiotic interaction","type":"narrow"},{"name":"negative regulation of enzyme activity in other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052199"}


id: PBO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S19 pseudogene 4","termid":"PBO:0072221"}


id: PBO:0085810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; epitope-tagged protein localizes to the cytoplasm; YKR074W is not an essential gene; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085810"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: GO:0045068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of extrathymically maturing T cells which react strongly with self-antigens.","definition_xrefs":["PMID:7880383","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative T cell selection","termid":"GO:0043383"},{"relation_name":"is_a","term_name":"extrathymic T cell selection","termid":"GO:0045062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative extrathymic T cell selection","synonyms":[{"name":"negative extrathymic T lymphocyte selection","type":"exact"},{"name":"negative extrathymic T-cell selection","type":"exact"},{"name":"negative extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045068"}


id: PBO:0039460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 11","termid":"PBO:0039460"}


id: PBO:0071472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 13","termid":"PBO:0071472"}


id: GO:0015024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the 2-sulfate groups of the 2-O-sulfo-D-glucuronate residues of chondroitin sulfate, heparin and heparitin sulfate.","definition_xrefs":["EC:3.1.6.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glucuronate-2-sulfatase activity","secondary_identifiers":["MetaCyc:3.1.6.18-RXN"],"synonyms":[{"name":"chondro-2-sulfatase activity","type":"related"},{"name":"glucuronate-2-sulphatase activity","type":"exact"},{"name":"glucurono-2-sulfatase activity","type":"related"},{"name":"polysaccharide-2-O-sulfo-D-glucuronate 2-sulfohydrolase activity","type":"related"}],"termid":"GO:0015024"}


id: GO:1904251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of bile acid metabolic process","synonyms":[{"name":"regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904251"}


id: FYPO:0003349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during anaphase B is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:1990023","PomBase:mah","GO:0000092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during anaphase B","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during anaphase B","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during anaphase B during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during anaphase B during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0003349"}


id: GO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["GOC:rph","CHEBI:17672","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"cellular nitrogen compound metabolic process","termid":"GO:0034641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bzn"],"synonyms":[{"name":"carbamoyl phosphate metabolism","type":"exact"}],"termid":"GO:0070408"}


id: PBO:0058092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4308","termid":"PBO:0058092"}


id: PBO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 3","termid":"PBO:0061569"}


id: PBO:0086342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved tRNA modification, in mitochondrial and cytoplasmic tRNAs; also responsible for pseudouracil modification of some mRNAs; PUS4 overexpression leads to translational derepression of GCN4 (Gcd- phenotype)","termid":"PBO:0086342"}


id: FYPO:0001540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of manganese ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular manganese level","synonyms":[{"name":"normal cellular manganese accumulation","type":"related"},{"name":"normal cellular manganese ion level","type":"exact"},{"name":"normal cellular manganese level during mitotic cell cycle","type":"related"},{"name":"normal cellular manganese level during vegetative growth","type":"exact"}],"termid":"FYPO:0001540"}


id: GO:0048689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a growth cone in an injured axon.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sprouting of injured axon","termid":"GO:0048682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of growth cone in injured axon","termid":"GO:0048689"}


id: PBO:0054184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1559","termid":"PBO:0054184"}


id: SO:0000527
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_C_cluster","synonyms":[{"name":"V D DJ C cluster","type":"exact"},{"name":"V-D-(DJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000527"}


id: PBO:0109649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 2 (pseudogene)","termid":"PBO:0109649"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: GO:0102162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8'-apo-beta,psi-caroten-8'-al + O2 = all-trans-retinal + 2,6-dimethylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.75","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans-8'-apo-beta-carotenal 15,15'-oxygenase activity","secondary_identifiers":["RHEA:26385","MetaCyc:RXN-11783"],"termid":"GO:0102162"}


id: PBO:0027580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multiseptate_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027580"}


id: FYPO:0000783
data:
  {"alleles_by_uniquename":{"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null},"genotype_count":1,"genotypes_by_uniquename":{"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to cytoplasm during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01745"],"single_locus_genotype_uniquenames":["lem2delta"],"synonyms":[{"name":"ectopic protein localization to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000783","terms_by_termid":{"FYECO:0000137":null,"FYPO:0003657":null,"FYPO_EXT:0000001":null}}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: GO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving puromycin, 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine, an aminonucleoside antibiotic that is a potent inhibitor of translation; produced by the bacterium Streptomyces alboniger.","definition_xrefs":["Wikipedia:Puromycin","GOC:jl","PMID:8226694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"puromycin metabolic process","synonyms":[{"name":"puromycin metabolism","type":"exact"}],"termid":"GO:0043637"}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: PBO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barrats oesophagus","termid":"PBO:0016564"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: PATO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decussate","synonyms":[{"name":"crosscutting","type":"exact"},{"name":"intercrossing","type":"exact"},{"name":"intersecting","type":"exact"}],"termid":"PATO:0001953"}


id: GO:0000422
data:
  {"annotated_genes":["SJAG_04232","SJAG_01283","SJAG_05261","SJAG_06309","SJAG_05017","SJAG_04502","SJAG_00059","SJAG_01274","SJAG_01251","SJAG_01135","SJAG_03100","SJAG_01783","SJAG_04963","SJAG_02699","SJAG_00645","SJAG_04219","SJAG_04759","SJAG_00115","SJAG_02414","SJAG_03435","SJAG_01382","SJAG_03851","SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85777,91007,93134,94116,95755,98994,103966,106935,108854],"is_not":false,"summary":null,"term":"GO:0000422"},{"annotations":[100211,105933,112896,110382,88519,87253,84769,88236,90539,72466,83597,95177,95458,90217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[69211],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"The autophagic process in which mitochondria are delivered to a type of vacuole and degraded in response to changing cellular conditions.","definition_xrefs":["PMID:15798367","PMID:19289147","PMID:23065344","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"},{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00115":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03435":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04759":null,"SJAG_04963":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"mitochondrion degradation","type":"broad"},{"name":"mitochondrion disassembly","type":"broad"},{"name":"mitophagy","type":"narrow"}],"termid":"GO:0000422","terms_by_termid":{"GO:0000422":null,"GO:0000423":null,"GO:1903599":null}}


id: PBO:0025535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22 (predicted)","termid":"PBO:0025535"}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: PBO:0109321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20/Hsp15.8","termid":"PBO:0109321"}


id: PBO:0063642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pepsinogen A5","termid":"PBO:0063642"}


id: SO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that does not lead to any change in the amino acid sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synonymous","termid":"SO:0001815"}


id: PBO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_meiotic_cell_cycle","termid":"PBO:0034570"}


id: PBO:0062306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily P member 3","termid":"PBO:0062306"}


id: GO:1905689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of diacylglycerol kinase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:23091060","GO_REF:0000059","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid kinase activity","termid":"GO:0090218"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol kinase activity","termid":"GO:1905687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of diacylglycerol kinase activity","synonyms":[{"name":"activation of 1,2-diacylglycerol kinase (phosphorylating)","type":"narrow"},{"name":"activation of 1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"activation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"activation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"activation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"activation of DG kinase activity","type":"narrow"},{"name":"activation of DGK activity","type":"narrow"},{"name":"activation of arachidonoyl-specific diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol kinase activity","type":"narrow"},{"name":"activation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"activation of diglyceride kinase activity","type":"narrow"},{"name":"activation of sn-1,2-diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"positive regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"positive regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"positive regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"positive regulation of DG kinase activity","type":"exact"},{"name":"positive regulation of DGK activity","type":"exact"},{"name":"positive regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"positive regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"positive regulation of diglyceride kinase activity","type":"exact"},{"name":"positive regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up regulation of DG kinase activity","type":"exact"},{"name":"up regulation of DGK activity","type":"exact"},{"name":"up regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up regulation of diglyceride kinase activity","type":"exact"},{"name":"up regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"up-regulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"up-regulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"up-regulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"up-regulation of DG kinase activity","type":"exact"},{"name":"up-regulation of DGK activity","type":"exact"},{"name":"up-regulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol kinase activity","type":"exact"},{"name":"up-regulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"up-regulation of diglyceride kinase activity","type":"exact"},{"name":"up-regulation of sn-1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase (phosphorylating)","type":"exact"},{"name":"upregulation of 1,2-diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of ATP:1,2-diacylglycerol 3-phosphotransferase activity","type":"narrow"},{"name":"upregulation of ATP:diacylglycerol phosphotransferase activity","type":"narrow"},{"name":"upregulation of CTP:diacylglycerol kinase activity","type":"narrow"},{"name":"upregulation of DG kinase activity","type":"exact"},{"name":"upregulation of DGK activity","type":"exact"},{"name":"upregulation of arachidonoyl-specific diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol kinase activity","type":"exact"},{"name":"upregulation of diacylglycerol:ATP kinase activity","type":"narrow"},{"name":"upregulation of diglyceride kinase activity","type":"exact"},{"name":"upregulation of sn-1,2-diacylglycerol kinase activity","type":"exact"}],"termid":"GO:1905689"}


id: PATO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to being turned, bowed, or twisted without breaking.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flexibility","termid":"PATO:0001543"}


id: PBO:0085126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; specifically associated with the U3 snoRNA, part of the large ribonucleoprotein complex known as the small subunit (SSU) processome, required for 18S rRNA biogenesis, part of the active pre-rRNA processing complex","termid":"PBO:0085126"}


id: PBO:0044535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase beta","termid":"PBO:0044535"}


id: GO:0050556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: deacetylisoipecoside + H2O = dopamine + secologanin.","definition_xrefs":["EC:4.3.3.3","RHEA:21756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine-lyase activity","termid":"GO:0016843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacetylisoipecoside synthase activity","secondary_identifiers":["MetaCyc:4.3.3.3-RXN","KEGG_REACTION:R05750"],"synonyms":[{"name":"deacetylisoipecoside dopamine-lyase (secologanin-forming)","type":"related"},{"name":"deacetylisoipecoside dopamine-lyase activity","type":"related"}],"termid":"GO:0050556"}


id: GO:2000923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"positive regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000923"}


id: PBO:0087971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichostatin A-insensitive homodimeric histone deacetylase (HDAC); specificity in vitro for histones H3, H4, H2A, and H2B; similar to Hda1p, Rpd3p, Hos1p, and Hos2p; deletion results in increased histone acetylation at rDNA repeats","termid":"PBO:0087971"}


id: FYPO:0001450
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to cold.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to cold","synonyms":[{"name":"increased growth during cellular response to cold","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to cold","type":"exact"},{"name":"resistance to cold during mitotic cell cycle","type":"related"},{"name":"resistance to cold during vegetative growth","type":"exact"},{"name":"resistance to low temperature","type":"exact"},{"name":"resistant to cold","type":"exact"}],"termid":"FYPO:0001450"}


id: PBO:0086716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene","termid":"PBO:0086716"}


id: PBO:0035771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035771"}


id: GO:0035769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell to cross a high endothelial venule in response to an external stimulus.","definition_xrefs":["CL:0000236","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis across high endothelial venule","termid":"GO:0002518"},{"relation_name":"is_a","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis across high endothelial venule","synonyms":[{"name":"B-cell chemotaxis across high endothelial venule","type":"exact"}],"termid":"GO:0035769"}


id: PBO:0054708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2117","termid":"PBO:0054708"}


id: FYPO:0000862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"normal centromeric histone H3-K9 dimethylation","type":"exact"},{"name":"normal histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000862"}


id: GO:0001884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine nucleoside, a compound consisting of a pyrimidine base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrimidine nucleoside binding","termid":"GO:0001884"}


id: PBO:0083609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a protein; completely overlaps the uncharacterized gene YKR075C; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083609"}


id: PBO:0088166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40 repeat-containing protein associated with the CCR4-NOT complex; interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission; CAF4 has a paralog, MDV1, that arose from the whole genome duplication","termid":"PBO:0088166"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: GO:0060589
data:
  {"annotated_genes":["SJAG_01699","SJAG_04943","SJAG_00858","SJAG_04548","SJAG_03678","SJAG_03085","SJAG_00991","SJAG_03748","SJAG_01011","SJAG_01526","SJAG_03655","SJAG_04522","SJAG_03153","SJAG_00551","SJAG_04080","SJAG_04283","SJAG_00864","SJAG_00807","SJAG_02520","SJAG_03021","SJAG_06588","SJAG_02063","SJAG_02486","SJAG_01659","SJAG_02819","SJAG_02160","SJAG_04771","SJAG_03089","SJAG_04938","SJAG_02277","SJAG_01025","SJAG_00028","SJAG_04400","SJAG_05346","SJAG_00467","SJAG_00990","SJAG_02539","SJAG_04910","SJAG_04615","SJAG_04733","SJAG_01319","SJAG_02012","SJAG_04284","SJAG_02027","SJAG_01576","SJAG_03142","SJAG_03705","SJAG_00143","SJAG_02493","SJAG_02645","SJAG_03246","SJAG_00216","SJAG_01415","SJAG_03836","SJAG_01386","SJAG_02529","SJAG_00092","SJAG_01114","SJAG_02004","SJAG_05210","SJAG_02390","SJAG_04074","SJAG_02368","SJAG_04491","SJAG_04010","SJAG_00289","SJAG_04776","SJAG_05184","SJAG_01309","SJAG_00514","SJAG_04982","SJAG_04724","SJAG_03338","SJAG_03600","SJAG_03268","SJAG_02471","SJAG_04391","SJAG_04462","SJAG_02831","SJAG_01048","SJAG_04203","SJAG_02765","SJAG_00338","SJAG_02248","SJAG_03002","SJAG_02422","SJAG_01600","SJAG_03361","SJAG_01184","SJAG_04653","SJAG_04464","SJAG_02307","SJAG_02379","SJAG_03488","SJAG_00801","SJAG_01695","SJAG_02231","SJAG_04765","SJAG_03704","SJAG_02833","SJAG_04013","SJAG_02278","SJAG_00824","SJAG_04837","SJAG_01030","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98927,72075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005092"},{"annotations":[102746,101834,102964,75965,92105,77310,71551,70268,88830,83302,106217,70354,90518,77068,110171,94354,100779,111184,90602,106111,84947,104726,72040,86909,73310,75867,102400,88924,78439,100537,91433,105394,84214,88932,95149,109440,89574,90981,106614,112240,70307,75849,90511,65577,91662,64726,74310,88457,93587,74895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005096"},{"annotations":[111448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[70652,86751,100655,102036,111176,75254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030695"},{"annotations":[90565,70176,72113,77168,109140,87742,111637,85572,91870,72308,88392,95315,106274,73568,102353,89912,92852,95316,77382,112973,92216,110672,87116,73547,89652,109186,78855,77115,94620,93255,93293,83281,100501,74219,89469,83816,93500,86843,101777,91615,105949,105404,74803,93967,109978,112987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005085"},{"annotations":[75411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005093"},{"annotations":[95019,106070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005094"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of an NTPase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":106,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00092":null,"SJAG_00143":null,"SJAG_00216":null,"SJAG_00289":null,"SJAG_00338":null,"SJAG_00467":null,"SJAG_00514":null,"SJAG_00551":null,"SJAG_00801":null,"SJAG_00807":null,"SJAG_00824":null,"SJAG_00858":null,"SJAG_00864":null,"SJAG_00990":null,"SJAG_00991":null,"SJAG_01011":null,"SJAG_01025":null,"SJAG_01030":null,"SJAG_01048":null,"SJAG_01114":null,"SJAG_01184":null,"SJAG_01309":null,"SJAG_01319":null,"SJAG_01386":null,"SJAG_01415":null,"SJAG_01526":null,"SJAG_01576":null,"SJAG_01600":null,"SJAG_01659":null,"SJAG_01695":null,"SJAG_01699":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02027":null,"SJAG_02063":null,"SJAG_02160":null,"SJAG_02231":null,"SJAG_02248":null,"SJAG_02277":null,"SJAG_02278":null,"SJAG_02307":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02390":null,"SJAG_02422":null,"SJAG_02471":null,"SJAG_02486":null,"SJAG_02493":null,"SJAG_02520":null,"SJAG_02529":null,"SJAG_02539":null,"SJAG_02645":null,"SJAG_02765":null,"SJAG_02819":null,"SJAG_02831":null,"SJAG_02833":null,"SJAG_03002":null,"SJAG_03021":null,"SJAG_03085":null,"SJAG_03089":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03246":null,"SJAG_03268":null,"SJAG_03338":null,"SJAG_03361":null,"SJAG_03488":null,"SJAG_03581":null,"SJAG_03600":null,"SJAG_03655":null,"SJAG_03678":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03748":null,"SJAG_03836":null,"SJAG_04010":null,"SJAG_04013":null,"SJAG_04074":null,"SJAG_04080":null,"SJAG_04203":null,"SJAG_04283":null,"SJAG_04284":null,"SJAG_04391":null,"SJAG_04400":null,"SJAG_04462":null,"SJAG_04464":null,"SJAG_04491":null,"SJAG_04522":null,"SJAG_04548":null,"SJAG_04615":null,"SJAG_04653":null,"SJAG_04724":null,"SJAG_04733":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04837":null,"SJAG_04910":null,"SJAG_04938":null,"SJAG_04943":null,"SJAG_04982":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05346":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"nucleoside-triphosphatase regulator activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:21873635":null},"synonyms":[{"name":"NTPase regulator activity","type":"exact"}],"termid":"GO:0060589","terms_by_termid":{"GO:0005085":null,"GO:0005092":null,"GO:0005093":null,"GO:0005094":null,"GO:0005095":null,"GO:0005096":null,"GO:0030695":null}}


id: GO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"},{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"natural killer cell cytokine production","synonyms":[{"name":"NK cell cytokine production","type":"exact"}],"termid":"GO:0002370"}


id: GO:0070390
data:
  {"annotated_genes":["SJAG_00641","SJAG_04472","SJAG_04656","SJAG_00298"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72581,75911,97408,106989],"is_not":false,"summary":null,"term":"GO:0070390"}]},"cv_name":"cellular_component","definition":"A protein complex that couples SAGA-dependent gene expression to mRNA export at the inner side of the nuclear pore complex (NPC). The TREX-2 complex is tethered to the inner side of the NPC via the nucleoporins Nup1 and Nup60; in S. cerevisiae it contains Sac3p, Thp1p, Sem1, Sus1p and Cdc31p.","definition_xrefs":["GOC:dgf","GOC:mah","PMID:19289793","PMID:28334829","PMID:17786152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_00641":null,"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"transcription export complex 2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Sac3-Thp1-Sus1-Sem1-Cdc31 complex","type":"exact"},{"name":"TREX-2 complex","type":"exact"}],"termid":"GO:0070390","terms_by_termid":{"GO:0070390":null}}


id: GO:0010441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the guard cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"guard cell differentiation","termid":"GO:0010052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"guard cell development","termid":"GO:0010441"}


id: FYPO:0005781
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the duration of cell cycle arrest or delay due to regulation by the mitotic spindle assembly checkpoint is lower than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"decreased duration of mitotic spindle assembly checkpoint","synonyms":[{"name":"decreased duration of mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"decreased duration of mitotic spindle assembly checkpoint activation","type":"exact"},{"name":"decreased duration of mitotic spindle assembly checkpoint during vegetative growth","type":"exact"},{"name":"decreased duration of spindle assembly checkpoint during mitotic cell cycle","type":"exact"},{"name":"premature mitotic spindle assembly checkpoint deactivation","type":"related"},{"name":"reduced duration of mitotic spindle assembly checkpoint","type":"exact"}],"termid":"FYPO:0005781"}


id: GO:0032045
data:
  {"annotated_genes":["SJAG_01659","SJAG_00143","SJAG_01032","SJAG_00688","SJAG_03089","SJAG_06588","SJAG_03928"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73546],"is_not":false,"summary":null,"term":"GO:0032045"},{"annotations":[89659,103191,100497,88503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071986"},{"annotations":[75080,76238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that stimulates the exchange of guanyl nucleotides associated with a GTPase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00688":null,"SJAG_01032":null,"SJAG_01659":null,"SJAG_03089":null,"SJAG_03928":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"guanine nucleotide exchange factor","type":"related"}],"termid":"GO:0032045","terms_by_termid":{"GO:0032045":null,"GO:0034066":null,"GO:0071986":null}}


id: GO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP.","definition_xrefs":["EC:2.4.1.175","MetaCyc:2.4.1.175-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1971482","MetaCyc:RXN-16325","Reactome:R-HSA-1971487","Reactome:R-HSA-3595176","Reactome:R-HSA-9632033"],"synonyms":[{"name":"N-acetylgalactosaminyltransferase II activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:beta-D-glucuronosyl-(1->3)-N-acetyl-beta-D-galactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"chondroitin synthase activity","type":"related"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"glucuronyl-N-acetylgalactosaminylproteoglycan beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylgalactosamine-chondroitin acetylgalactosaminyltransferase II activity","type":"related"}],"termid":"GO:0047238"}


id: GO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + penicillin N = CO2 + deacetoxycephalosporin C + H2O + succinate.","definition_xrefs":["RHEA:20748","EC:1.14.20.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacetoxycephalosporin-C synthase activity","secondary_identifiers":["MetaCyc:1.14.20.1-RXN","GO:0045441","KEGG_REACTION:R05301"],"synonyms":[{"name":"DAOC synthase activity","type":"related"},{"name":"DAOCS activity","type":"related"},{"name":"deacetoxycephalosporin C synthetase activity","type":"exact"},{"name":"expandase activity","type":"exact"},{"name":"penicillin N expandase activity","type":"related"},{"name":"penicillin-N,2-oxoglutarate:oxygen oxidoreductase (ring-expanding)","type":"related"}],"termid":"GO:0050599"}


id: GO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of signal promoting sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade during sporulation (sensu Saccharomyces) (obsolete GO:0000202)","synonyms":[{"name":"MAPKKK cascade during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000202"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: PBO:0068070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 375","termid":"PBO:0068070"}


id: GO:0039546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host MAVS (mitochondrial inhibitor of viral signaling) protein by cleavage of peptide bonds, thereby inhibiting the host innate immune response. For example, MAVS harbors a C-terminal transmembrane domain that targets it to the mitochondrial outer membrane; cleavage within this domain removes MAVS from the membrane, thus preventing it from signaling.","definition_xrefs":["PMID:21436888","PMID:22238314"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host MAVS activity by MAVS proteolysis (obsolete GO:0039546)","synonyms":[{"name":"viral protease cleavage of MAVS","type":"exact"}],"termid":"GO:0039546"}


id: PBO:0087102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17A has a paralog, RPS17B, that arose from the whole genome duplication","termid":"PBO:0087102"}


id: GO:1901635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of presynaptic active zone structure (obsolete GO:1901635)","synonyms":[{"name":"regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901635"}


id: PBO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aph-1 homolog B, gamma-secretase subunit","termid":"PBO:0039698"}


id: GO:0030334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell migration.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell motility","termid":"GO:2000145"},{"relation_name":"regulates","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell migration","termid":"GO:0030334"}


id: PBO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition","termid":"PBO:0031802"}


id: PBO:0053010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMP5 antisense RNA 1","termid":"PBO:0053010"}


id: GO:2000963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide metabolic process","termid":"GO:2000960"},{"relation_name":"regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000963"}


id: PBO:0044988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 40","termid":"PBO:0044988"}


id: PBO:0044519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAAM2 antisense RNA 1","termid":"PBO:0044519"}


id: PBO:0034369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-commensually_interacts_with","termid":"PBO:0034369"}


id: PBO:0070224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 157 pseudogene","termid":"PBO:0070224"}


id: PBO:0038395
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-affected_by","termid":"PBO:0038395"}


id: PBO:0074524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA B2","termid":"PBO:0074524"}


id: GO:1902539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A macropinocytosis which involves another organism.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism macropinocytosis (obsolete GO:1902539)","termid":"GO:1902539"}


id: GO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of compact myelin sheaths around the axons of the anterior lateral line nerve.","definition_xrefs":["PMID:12112375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelination of lateral line nerve axons","termid":"GO:0048897"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination of anterior lateral line nerve axons","termid":"GO:0048914"}


id: PBO:0062355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily P member 1","termid":"PBO:0062355"}


id: GO:1901150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vistamycin.","definition_xrefs":["UniPathway:UPA00972","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound metabolic process","termid":"GO:0006807"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vistamycin metabolic process","synonyms":[{"name":"ribostamycin metabolic process","type":"exact"},{"name":"ribostamycin metabolism","type":"exact"},{"name":"vistamycin metabolism","type":"exact"}],"termid":"GO:1901150"}


id: PBO:0039292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG8 alpha-1,3-glucosyltransferase","termid":"PBO:0039292"}


id: GO:0060192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of lipase activity, the hydrolysis of a lipid or phospholipid.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of lipase activity","termid":"GO:0060191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipase activity","termid":"GO:0060192"}


id: PBO:0044941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0044941"}


id: PR:O94395
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An X-ray repair cross-complementing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12604:SF2","OMA:SCHPO04947","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase II subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.02c","secondary_identifiers":["UniProtKB:O94395"],"synonyms":[{"name":"ATP-dependent DNA helicase II subunit Ku70 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-XRCC6","type":"exact"}],"termid":"PR:O94395"}


id: GO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005569)","synonyms":[{"name":"small nucleolar RNA","type":"exact"}],"termid":"GO:0005569"}


id: PBO:0056913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane integral NOTCH2 associated receptor 2","termid":"PBO:0056913"}


id: PR:Q9USQ5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9USQ5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine decarboxylase antizyme (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9USQ5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9USQ5-1"],"synonyms":[{"name":"Spom972h-spa1/iso:1","type":"exact"}],"termid":"PR:Q9USQ5-1"}


id: PBO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-absent_during","termid":"PBO:0012829"}


id: PBO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase","termid":"PBO:0001053"}


id: GO:1902930
data:
  {"annotated_genes":["SJAG_02406","SJAG_02104","SJAG_02044","SJAG_04018","SJAG_03538","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[105142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[84759,108890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[75053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[101203,84304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["PMID:23332010","GO_REF:0000058","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02406":null,"SJAG_03538":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of alcohol anabolism","type":"exact"},{"name":"regulation of alcohol biosynthesis","type":"exact"},{"name":"regulation of alcohol formation","type":"exact"},{"name":"regulation of alcohol synthesis","type":"exact"},{"name":"regulation of solventogenesis","type":"broad"}],"termid":"GO:1902930","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null,"GO:0090180":null}}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0068332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 39","termid":"PBO:0068332"}


id: PBO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MS ion channel protein 1 (predicted)","termid":"PBO:0005217"}


id: GO:1904649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17024416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell apoptotic process","synonyms":[{"name":"regulation of adipocyte apoptosis","type":"narrow"},{"name":"regulation of adipocyte apoptotic process","type":"exact"},{"name":"regulation of adipose cell apoptosis","type":"narrow"},{"name":"regulation of adipose cell apoptotic process","type":"exact"},{"name":"regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904649"}


id: GO:0018645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propene + NADH + H+ + O2 = 1,2-epoxypropane + NAD+ + H2O.","definition_xrefs":["EC:1.14.13.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alkene monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.69-RXN","UM-BBD_enzymeID:e0039","RHEA:11792"],"synonyms":[{"name":"alkene epoxygenase activity","type":"related"},{"name":"alkene,NADH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018645"}


id: PBO:0004004
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.15","termid":"PBO:0004004"}


id: GO:0005391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in).","definition_xrefs":["EC:7.2.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type sodium transporter activity","termid":"GO:0008554"},{"relation_name":"is_a","term_name":"P-type potassium transmembrane transporter activity","termid":"GO:0008556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"P-type sodium:potassium-exchanging transporter activity","secondary_identifiers":["Wikipedia:ATPase\\,_Na%2B/K%2B_transporting\\,_alpha_1","Reactome:R-HSA-936897","MetaCyc:3.6.3.9-RXN","RHEA:18353","TC:3.A.3.1.1"],"synonyms":[{"name":"Na(+)/K(+)-ATPase activity","type":"related"},{"name":"Na(+)/K(+)-exchanging ATPase activity","type":"related"},{"name":"Na+,K+-ATPase activity","type":"related"},{"name":"Na+/K+-ATPase activity","type":"related"},{"name":"Na+/K+-exchanging ATPase activity","type":"related"},{"name":"Na,K-activated ATPase activity","type":"related"},{"name":"P-type sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium pump","type":"broad"},{"name":"sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:0005391"}


id: PBO:0053882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1162","termid":"PBO:0053882"}


id: GO:0043636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bisphenol A, 4,4'-(propane-2,2-diyl)diphenol, a synthetic, aromatic organic compound used as a monomer in the manufacture of polycarbonate plastic and in the manufacture of epoxy resins.","definition_xrefs":["GOC:jl","Wikipedia:Bisphenol_A"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"bisphenol A catabolic process","synonyms":[{"name":"bisphenol-A catabolic process","type":"exact"},{"name":"bisphenol-A catabolism","type":"exact"}],"termid":"GO:0043636"}


id: PBO:0046599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 1","termid":"PBO:0046599"}


id: PBO:0089768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase alpha subunit Gta1","termid":"PBO:0089768"}


id: MOD:00797
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-cysteine residue to the PEP adduct, 2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","definition_xrefs":["PubMed:7999765","PubMed:8664284","ChEBI:149496","RESID:AA0391","PubMed:4696757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","synonyms":[{"name":"(2R)-2-amino-3-[1-carboxy-1-(phosphonooxy)ethyl]sulfanylpropanoic acid","type":"exact"},{"name":"2-(S-L-cysteinyl)pyruvic acid O-phosphothioketal","type":"exact"},{"name":"2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-2-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-([(2R)-2-azanyl-2-carboxyethyl]sulfanyl)-2-(phosphonooxy)propanoic acid","type":"exact"},{"name":"MOD_RES 2-(S-cysteinyl)pyruvic acid O-phosphothioketal","type":"exact"},{"name":"S-[1-carboxy-1-(phosphonooxy)ethyl]cysteine","type":"exact"},{"name":"SPEPCys","type":"exact"},{"name":"cysteinyl pyruvate O-phosphothioketal","type":"exact"},{"name":"phosphoenolpyruvate cysteine adduct","type":"exact"},{"name":"phospholactoyl cysteine adduct","type":"exact"}],"termid":"MOD:00797"}


id: PBO:0028154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_epirubicin","termid":"PBO:0028154"}


id: GO:0004324
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104982],"is_not":false,"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced ferredoxin + NADP+ = oxidized ferredoxin + NADPH + H+.","definition_xrefs":["RHEA:20125","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferredoxin-NAD(P) reductase activity","termid":"GO:0008937"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ferredoxin-NADP+ reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.18.1.2-RXN","EC:1.18.1.2"],"synonyms":[{"name":"NADP:ferredoxin oxidoreductase activity","type":"related"},{"name":"NADPH:ferredoxin oxidoreductase activity","type":"related"},{"name":"TPNH-ferredoxin reductase activity","type":"related"},{"name":"ferredoxin-NADP oxidoreductase activity","type":"related"},{"name":"ferredoxin-NADP reductase activity","type":"exact"},{"name":"ferredoxin-NADP-oxidoreductase activity","type":"related"},{"name":"ferredoxin-TPN reductase activity","type":"related"},{"name":"ferredoxin-nicotinamide adenine dinucleotide phosphate reductase activity","type":"related"},{"name":"ferredoxin-nicotinamide-adenine dinucleotide phosphate (oxidized) reductase activity","type":"related"},{"name":"ferredoxin:NADP+ oxidoreductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate-adrenodoxin reductase activity","type":"related"}],"termid":"GO:0004324","terms_by_termid":{"GO:0004324":null}}


id: GO:0070806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phialide development, a process that leads to the formation of phialides. Phialides are specialized cells that bud from the ends of metulae on the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of conidiophore development","termid":"GO:0070794"},{"relation_name":"is_a","term_name":"regulation of phialide development","termid":"GO:0070805"},{"relation_name":"negatively_regulates","term_name":"phialide development","termid":"GO:0070790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phialide development","termid":"GO:0070806"}


id: GO:0062091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the chloroplast inner membrane and facing the stroma that is associated with the chloroplast inner membrane translocase complex and provides the ATPase motor activity to drive import of proteins into the chloroplast stroma.","definition_xrefs":["PMID:30309901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ycf2/FtsHi complex","synonyms":[{"name":"TIC complex associated chloroplast protein import motor","type":"exact"}],"termid":"GO:0062091"}


id: PBO:0081031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11C","termid":"PBO:0081031"}


id: PBO:0074932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 99","termid":"PBO:0074932"}


id: GO:0021737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the emboliform nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:dph","GOC:jid","GOC:curators","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"emboliform nucleus development","termid":"GO:0021737"}


id: GO:0009114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate.","definition_xrefs":["PMID:3196295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"hypoxanthine metabolic process","termid":"GO:0046100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"hypoxanthine catabolic process","secondary_identifiers":["GO:0006150"],"synonyms":[{"name":"hypoxanthine breakdown","type":"exact"},{"name":"hypoxanthine catabolism","type":"exact"},{"name":"hypoxanthine degradation","type":"exact"},{"name":"hypoxanthine oxidation","type":"narrow"}],"termid":"GO:0009114"}


id: PBO:0068703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 84, pseudogene","termid":"PBO:0068703"}


id: PBO:0004756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25 (predicted)","termid":"PBO:0004756"}


id: PBO:0058002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-1","termid":"PBO:0058002"}


id: PBO:0061259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like B","termid":"PBO:0061259"}


id: PBO:0058052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4273","termid":"PBO:0058052"}


id: GO:1903338
data:
  {"annotated_genes":["SJAG_01787","SJAG_00610","SJAG_03705","SJAG_02684","SJAG_04668","SJAG_04666","SJAG_04462","SJAG_03655","SJAG_04551","SJAG_00661","SJAG_00163","SJAG_04771","SJAG_02258","SJAG_04522","SJAG_02278","SJAG_00424","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102963,103775,105392],"is_not":false,"summary":null,"term":"GO:1903338"},{"annotations":[106238,97587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903340"},{"annotations":[83280,88036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[86443,88022,98268,100710,112985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[85152,88042,98270,90509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[88319,95655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032995"},{"annotations":[106239,83357,71549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_01181":null,"SJAG_01787":null,"SJAG_02258":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_03655":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"regulation of cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903338","terms_by_termid":{"GO:0032995":null,"GO:0060237":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null}}


id: PBO:0038567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein 1","termid":"PBO:0038567"}


id: GO:0036305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an ameloblast, a cylindrical epithelial cell in the innermost layer of the enamel organ.","definition_xrefs":["CL:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ameloblast differentiation","termid":"GO:0036305"}


id: PBO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase (predicted)","termid":"PBO:0004290"}


id: PBO:0042777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 89","termid":"PBO:0042777"}


id: PBO:0050231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 9","termid":"PBO:0050231"}


id: PBO:0074040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 1","termid":"PBO:0074040"}


id: PBO:0088835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit","termid":"PBO:0088835"}


id: GO:0033897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0016829","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"ribonuclease T2 activity","secondary_identifiers":["MetaCyc:3.1.27.5-RXN"],"synonyms":[{"name":"Escherichia coli ribonuclease I' ribonuclease PP2 activity","type":"exact"},{"name":"Escherichia coli ribonuclease II activity","type":"related"},{"name":"RNAase CL activity","type":"exact"},{"name":"RNase (non-base specific) activity","type":"exact"},{"name":"RNase II activity","type":"broad"},{"name":"RNase M activity","type":"related"},{"name":"RNase Ms activity","type":"exact"},{"name":"RNase T2 activity","type":"related"},{"name":"acid RNase activity","type":"exact"},{"name":"acid ribonuclease activity","type":"exact"},{"name":"base-non-specific ribonuclease activity","type":"exact"},{"name":"non-base specific ribonuclease activity","type":"exact"},{"name":"nonbase-specific RNase activity","type":"exact"},{"name":"nonspecific RNase activity","type":"exact"},{"name":"ribonnuclease (non-base specific) activity","type":"exact"},{"name":"ribonuclease (non-base specific) activity","type":"related"},{"name":"ribonuclease II activity","type":"broad"},{"name":"ribonuclease M activity","type":"exact"},{"name":"ribonuclease N2 activity","type":"exact"},{"name":"ribonuclease PP3 activity","type":"related"},{"name":"ribonuclease U4 activity","type":"exact"},{"name":"ribonucleate 3'-oligonucleotide hydrolase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033897"}


id: PBO:0055771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand of numb-protein X 1","termid":"PBO:0055771"}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: GO:0045684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermis development","synonyms":[{"name":"activation of epidermis development","type":"narrow"},{"name":"positive regulation of epidermal development","type":"exact"},{"name":"positive regulation of hypodermis development","type":"related"},{"name":"stimulation of epidermis development","type":"narrow"},{"name":"up regulation of epidermis development","type":"exact"},{"name":"up-regulation of epidermis development","type":"exact"},{"name":"upregulation of epidermis development","type":"exact"}],"termid":"GO:0045684"}


id: PBO:0060913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1","termid":"PBO:0060913"}


id: GO:0006241
data:
  {"annotated_genes":["SJAG_00533","SJAG_05024","SJAG_02887","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95549],"is_not":false,"summary":null,"term":"GO:0006241"},{"annotations":[83552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[110087,88573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"CTP metabolic process","termid":"GO:0046036"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_02887":null,"SJAG_03708":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CTP anabolism","type":"exact"},{"name":"CTP biosynthesis","type":"exact"},{"name":"CTP formation","type":"exact"},{"name":"CTP synthesis","type":"exact"}],"termid":"GO:0006241","terms_by_termid":{"GO:0006241":null,"GO:0044210":null,"GO:0044211":null}}


id: MOD:01623
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a C-terminal 1-thioglycine.","definition_xrefs":["PubMed:19145231","RESID:AA0265#var","PubMed:11463785","PubMed:9367957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-thioglycine","termid":"MOD:01625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-thioglycine (C-terminal)","termid":"MOD:01623"}


id: GO:0060698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of endoribonuclease.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease inhibitor activity","termid":"GO:0008428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0003674","GO:0004857","GO:0098772"],"is_obsolete":false,"name":"endoribonuclease inhibitor activity","termid":"GO:0060698"}


id: GO:0040039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Migration of a cell in a multicellular organism that, having changed its location, is required to induce normal properties in one or more cells at its new location. An example of this would be the distal tip cells of Caenorhabditis elegans.","definition_xrefs":["ISBN:0879694882","ISBN:087969307X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive cell migration","termid":"GO:0040039"}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: FYPO:0005786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a shorter distance from the breaks site than normal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["PMID:27729451","PomBase:mah","GO:0000729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break processing","termid":"FYPO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased spatial extent of double-strand break processing","synonyms":[{"name":"decreased spatial extent of DSB processing","type":"exact"},{"name":"decreased spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"decreased spatial extent of double-strand break resection","type":"exact"},{"name":"reduced spatial extent of double-strand break processing","type":"exact"}],"termid":"FYPO:0005786"}


id: GO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}


id: GO:0071785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) cisternal network in a stable functional or structural state. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network maintenance","synonyms":[{"name":"ER cisternal network maintenance","type":"exact"}],"termid":"GO:0071785"}


id: GO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the respiratory chain located in the plasma membrane, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain. Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex II","termid":"GO:0045273"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane respirasome","termid":"GO:0070470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex II","synonyms":[{"name":"respiratory chain complex II","type":"broad"}],"termid":"GO:0045274"}


id: GO:0015864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a pyrimidine nucleoside, a pyrimidine base covalently bonded to a ribose or deoxyribose sugar, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pyrimidine nucleoside transport","termid":"GO:0015864"}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: GO:0071028
data:
  {"annotated_genes":["SJAG_03745","SJAG_02879","SJAG_04500","SJAG_03179","SJAG_04818","SJAG_04153","SJAG_04084","SJAG_01521","SJAG_04025","SJAG_00425","SJAG_02275","SJAG_00961","SJAG_04824","SJAG_02622","SJAG_04198","SJAG_01818","SJAG_00854","SJAG_00456","SJAG_04321","SJAG_02382","SJAG_01331","SJAG_01191","SJAG_04768","SJAG_03984","SJAG_04006","SJAG_01431"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71485,71776,72339,72964,74020,85158,87862,88678,90529,91477,96506,110586,111025],"is_not":false,"summary":null,"term":"GO:0071028"},{"annotations":[113171,70343,92785,102797,89053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[111471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[105079,84566,104559,86461,87986,101667,83257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant mRNAs within the nucleus.","definition_xrefs":["PMID:12417728","PMID:14718167","PMID:18644474","GOC:krc","GOC:dgf","PMID:11586364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_00456":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_01191":null,"SJAG_01331":null,"SJAG_01431":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02275":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04321":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0044248","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear mRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0071048","GO:0071049","GO:0071033"],"synonyms":[{"name":"nuclear aberrant mRNA catabolic process","type":"exact"},{"name":"nuclear mRNA quality control","type":"exact"},{"name":"nuclear retention of pre-mRNA at the site of transcription","type":"narrow"},{"name":"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription","type":"narrow"},{"name":"nuclear retention of unspliced pre-mRNA at the site of transcription","type":"narrow"}],"termid":"GO:0071028","terms_by_termid":{"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null}}


id: PATO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Absence of an organ, tissue or cell due to failure to develop from a primordium or precursor cell.","definition_xrefs":["PATOC:GVG","PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplastic/hypoplastic","termid":"PATO:0002290"},{"relation_name":"is_a","term_name":"agenesis","termid":"PATO:0002291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplastic","synonyms":[{"name":"aplasia","type":"exact"},{"name":"undeveloped","type":"exact"}],"termid":"PATO:0001483"}


id: PBO:0034056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_provides_input_for","termid":"PBO:0034056"}


id: GO:0042949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of arbutin, a glycoside found in the bearberry and related plants which has been used to treat urinary-tract diseases, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:19965875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transport","termid":"GO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"arbutin transport","termid":"GO:0042949"}


id: FYPO:0002286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to osmotic stress is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to osmotic stress","termid":"FYPO:0003198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to osmotic stress","synonyms":[{"name":"decreased RNA level during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to osmotic stress","type":"narrow"},{"name":"decreased transcript level during cellular response to osmotic stress","type":"exact"},{"name":"reduced RNA level during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002286"}


id: PBO:0040273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 7","termid":"PBO:0040273"}


id: PBO:0072630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and SPRY domain containing 1","termid":"PBO:0072630"}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: PBO:0085051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; expression induced in response to heat stress; FUN19 has a paralog, YOR338W, that arose from the whole genome duplication","termid":"PBO:0085051"}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: GO:0008718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor.","definition_xrefs":["RHEA:18125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-11193"],"synonyms":[{"name":"D-amino-acid:(acceptor) oxidoreductase (deaminating)","type":"exact"},{"name":"D-amino-acid:acceptor oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0008718"}


id: PBO:0086637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR196W is not an essential gene","termid":"PBO:0086637"}


id: MOD:00155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4'-dihydroxyphenylalanine.","definition_xrefs":["DeltaMass:0","PubMed:1610822","RESID:AA0146","OMSSA:194","OMSSA:64","PubMed:1903612","PubMed:3734192","Unimod:35#Y","ChEBI:141815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4'-dihydroxyphenylalanine","synonyms":[{"name":"(2S)-2-amino-3-(3,4-dihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4-Dihydroxy-Phenylalanine (from Tyrosine) (DOPA)","type":"exact"},{"name":"3HyTyr","type":"exact"},{"name":"L-3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"L-3'-hydroxytyrosine","type":"exact"},{"name":"L-DOPA","type":"exact"},{"name":"MOD_RES 3',4'-dihydroxyphenylalanine","type":"exact"},{"name":"hydroxylationy","type":"exact"},{"name":"levodopa","type":"exact"},{"name":"mod194","type":"exact"}],"termid":"MOD:00155"}


id: PBO:0034428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_iron_ion_starvation-induced_proteins_during_glutathione_starvation","termid":"PBO:0034428"}


id: GO:0140159
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106220],"is_not":false,"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:vw","PMID:17459946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"borate transmembrane transport","termid":"GO:0035445"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"borate export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140159","terms_by_termid":{"GO:0140159":null}}


id: GO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms produce an extracellular matrix and form multicellular aggregates at an air-liquid interface.","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"surface biofilm formation","termid":"GO:0090604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species surface biofilm formation","secondary_identifiers":["GO:0032022"],"synonyms":[{"name":"multicellular pellicle formation","type":"related"}],"termid":"GO:0090606"}


id: PBO:0078323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA aspartic acid methyltransferase 1","termid":"PBO:0078323"}


id: PBO:0063755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 20","termid":"PBO:0063755"}


id: PR:Q9UT52
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-tubulin complex subunit mod21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.08c","synonyms":[{"name":"Spom972h-mod21","type":"exact"}],"termid":"PR:Q9UT52"}


id: GO:0072694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of a caffeine stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to caffeine (obsolete GO:0072694)","termid":"GO:0072694"}


id: GO:0015283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptogenic cytochrome c release channel activity (obsolete GO:0015283)","synonyms":[{"name":"Bcl-2","type":"narrow"},{"name":"apoptogenic cytochrome c release channel activity","type":"exact"}],"termid":"GO:0015283"}


id: PBO:0066038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 7","termid":"PBO:0066038"}


id: GO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized, terminal region of a neuron projection such as an axon or a dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection terminus","synonyms":[{"name":"nerve terminal","type":"related"},{"name":"neuron projection terminal","type":"exact"},{"name":"neuron terminal specialization","type":"exact"}],"termid":"GO:0044306"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: FYPO:0001945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein secretion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport during vegetative growth","termid":"FYPO:0004848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein secretion","synonyms":[{"name":"normal protein secretion during mitotic cell cycle","type":"related"},{"name":"normal protein secretion during vegetative growth","type":"exact"}],"termid":"FYPO:0001945"}


id: PBO:0027160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_glucose_starvation","termid":"PBO:0027160"}


id: GO:0033127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of one or more phosphate groups to a histone protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone phosphorylation (obsolete GO:0033127)","termid":"GO:0033127"}


id: MOD:01075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a mercury atom or a cluster containing mercury for hydrogen atoms, or that coordinates a mercury ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury containing modified residue","synonyms":[{"name":"HgRes","type":"exact"}],"termid":"MOD:01075"}


id: PBO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 196 pseudogene","termid":"PBO:0070253"}


id: GO:0042839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate metabolic process","synonyms":[{"name":"D-glucuronate metabolism","type":"exact"}],"termid":"GO:0042839"}


id: PBO:0068169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 476","termid":"PBO:0068169"}


id: GO:0102472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + NADPH + O2 + 2 H+ = 2-hydroxyeriodictyol + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"eriodictyol 2-hydroxylase activity","secondary_identifiers":["RHEA:57596","MetaCyc:RXN-14077"],"termid":"GO:0102472"}


id: PBO:0074674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 59A","termid":"PBO:0074674"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: GO:0008673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate + ATP = 2-dehydro-3-deoxy-6-phospho-D-gluconate + ADP + 2 H+.","definition_xrefs":["RHEA:14797","EC:2.7.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"2-dehydro-3-deoxygluconokinase activity","secondary_identifiers":["MetaCyc:DEOXYGLUCONOKIN-RXN","KEGG_REACTION:R01541"],"synonyms":[{"name":"2-keto-3-deoxy-D-gluconic acid kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconate kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconokinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygluconokinase activity","type":"related"},{"name":"3-deoxy-2-oxo-D-gluconate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"KDG kinase activity","type":"related"},{"name":"ketodeoxygluconokinase activity","type":"related"}],"termid":"GO:0008673"}


id: GO:0050218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + propanoate + CoA = AMP + diphosphate + propanoyl-CoA.","definition_xrefs":["EC:6.2.1.17","MetaCyc:PROPIONATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid-CoA ligase activity","termid":"GO:0031955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"propionate-CoA ligase activity","secondary_identifiers":["RHEA:20373"],"synonyms":[{"name":"propanoate:CoA ligase (AMP-forming)","type":"related"},{"name":"propionyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050218"}


id: GO:0008240
data:
  {"annotated_genes":["SJAG_04928"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73623],"is_not":false,"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of an N-terminal tripeptide from a polypeptide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"tripeptidyl-peptidase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["EC:3.4.14.9","EC:3.4.14.10","MetaCyc:3.4.14.10-RXN","MetaCyc:3.4.14.9-RXN"],"termid":"GO:0008240","terms_by_termid":{"GO:0008240":null}}


id: GO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen","synonyms":[{"name":"endogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002483"}


id: PBO:0088212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase","termid":"PBO:0088212"}


id: FYPO:0005882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gamma-glutamyl-2-aminobutyrate (also called gamma-Glu-Abu) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular gamma-glutamyl-2-aminobutyrate level","synonyms":[{"name":"increased cellular gamma-Glu-Abu level","type":"related"},{"name":"increased cellular gamma-Glu-Abu(1-) level","type":"exact"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gamma-glutamyl-2-aminobutyrate level during vegetative growth","type":"exact"},{"name":"increased gamma-glutamyl-2-aminobutyrate accumulation","type":"related"}],"termid":"FYPO:0005882"}


id: PATO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male pseudohermaphrodite","termid":"PATO:0001828"}


id: PBO:0082177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082177"}


id: GO:0047754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + choline = adenosine 3',5'-diphosphate + choline sulfate + H+.","definition_xrefs":["RHEA:21984","EC:2.8.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"choline sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R01027","MetaCyc:CHOLINE-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:choline sulfotransferase activity","type":"related"},{"name":"choline sulphokinase activity","type":"related"},{"name":"choline sulphotransferase activity","type":"exact"}],"termid":"GO:0047754"}


id: PBO:0074095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A9 and RAB7B antisense RNA 1","termid":"PBO:0074095"}


id: PBO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc5","termid":"PBO:0001506"}


id: GO:0046548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a rod cell, one of the sensory cells in the eye that reacts to the presence of light. Rod cells contain the photopigment rhodopsin or porphyropsin and are responsible for vision in dim light.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell development","termid":"GO:0042462"},{"relation_name":"part_of","term_name":"retinal rod cell differentiation","termid":"GO:0060221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal rod cell development","termid":"GO:0046548"}


id: PATO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternation","termid":"PATO:0000999"}


id: GO:0106271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NADP+ = D-arabinono-1,4-lactone + NADPH.","definition_xrefs":["RHEA:21892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0045290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.117"],"termid":"GO:0106271"}


id: PBO:0034526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_recombination_at_hotspot","termid":"PBO:0034526"}


id: GO:0033571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lactoferrin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lactoferrin transport","termid":"GO:0033571"}


id: PBO:0069104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 352, pseudogene","termid":"PBO:0069104"}


id: GO:1903541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of exosomal secretion","synonyms":[{"name":"regulation of exosomal protein secretion","type":"narrow"},{"name":"regulation of exosomal secretory pathway","type":"exact"},{"name":"regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903541"}


id: PBO:0073920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 9","termid":"PBO:0073920"}


id: PBO:0081897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 848, pseudogene","termid":"PBO:0081897"}


id: PBO:0085561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing GATA family zinc finger motifs; similar to Gln3p and Dal80p; expression repressed by leucine","termid":"PBO:0085561"}


id: PBO:0024839
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SUV3","termid":"PBO:0024839"}


id: PBO:0086896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; non-essential gene; overexpression results in elevated colony sectoring, an indicator of chromosomal instability","termid":"PBO:0086896"}


id: PBO:0082523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-cycle checkpoint S/T protein kinase; required for transient G2/M arrest after DNA damage, damage-induced transcription, and nuclear-to-cytoplasmic redistribution of Rnr2p-Rnr4p after genotoxic stress and iron deprivation; phosphorylates repair protein Rad55p, transcriptional repressor Sml1p, superoxide dismutase, and ribonucleotide reductase inhibitors Crt1p and Dif1p; functions in the Mec1p pathway to regulate dNTP pools and telomere length; postreplicative repair role","termid":"PBO:0082523"}


id: PBO:0053581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 604","termid":"PBO:0053581"}


id: PATO:0001768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer or a population by virtue of some of it's members' inability to survive to reproduce.","definition_xrefs":["PATOC:CVC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-lethal (sensu genetics)","termid":"PATO:0001768"}


id: PBO:0081896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 847, pseudogene","termid":"PBO:0081896"}


id: PBO:0044593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 1","termid":"PBO:0044593"}


id: GO:0010189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterocycle biosynthetic process","termid":"GO:0018130"},{"relation_name":"is_a","term_name":"vitamin E metabolic process","termid":"GO:0042360"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"},{"relation_name":"is_a","term_name":"organic cyclic compound biosynthetic process","termid":"GO:1901362"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"vitamin E biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1422"],"synonyms":[{"name":"alpha-tocopherol biosynthesis","type":"narrow"},{"name":"alpha-tocopherol biosynthetic process","type":"narrow"},{"name":"tocopherol biosynthesis","type":"exact"},{"name":"tocopherol biosynthetic process","type":"exact"},{"name":"vitamin E anabolism","type":"exact"},{"name":"vitamin E biosynthesis","type":"exact"},{"name":"vitamin E formation","type":"exact"},{"name":"vitamin E synthesis","type":"exact"}],"termid":"GO:0010189"}


id: GO:0004142
data:
  {"annotated_genes":["SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88662],"is_not":false,"summary":null,"term":"GO:0004142"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine.","definition_xrefs":["RHEA:32939","EC:2.7.8.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482973","Reactome:R-HSA-1482961","MetaCyc:RXN-5781"],"synonyms":[{"name":"1-alkyl-2-acetyl-m-glycerol:CDPcholine choline phosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetyl-sn-glycerol cholinephosphotransferase activity","type":"related"},{"name":"1-alkyl-2-acetylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline diglyceride phosphotransferase activity","type":"related"},{"name":"CDP-choline:1,2-diacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"CPT","type":"related"},{"name":"alkylacylglycerol choline phosphotransferase activity","type":"related"},{"name":"alkylacylglycerol cholinephosphotransferase activity","type":"related"},{"name":"cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine glyceride transferase activity","type":"related"},{"name":"cytidine diphosphorylcholine diglyceride transferase activity","type":"related"},{"name":"diacylglycerol choline phosphotransferase activity","type":"related"},{"name":"phosphocholine diacylglyceroltransferase activity","type":"related"},{"name":"phosphorylcholine--glyceride transferase activity","type":"related"},{"name":"sn-1,2-diacylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0004142","terms_by_termid":{"GO:0004142":null}}


id: GO:0045726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin biosynthetic process","synonyms":[{"name":"activation of integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of integrin anabolism","type":"exact"},{"name":"positive regulation of integrin biosynthesis","type":"exact"},{"name":"positive regulation of integrin formation","type":"exact"},{"name":"positive regulation of integrin synthesis","type":"exact"},{"name":"stimulation of integrin biosynthetic process","type":"narrow"},{"name":"up regulation of integrin biosynthetic process","type":"exact"},{"name":"up-regulation of integrin biosynthetic process","type":"exact"},{"name":"upregulation of integrin biosynthetic process","type":"exact"}],"termid":"GO:0045726"}


id: PBO:0081023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 4","termid":"PBO:0081023"}


id: PBO:0070624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 8","termid":"PBO:0070624"}


id: GO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type II activin receptor.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor binding","termid":"GO:0070697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type II activin receptor binding","termid":"GO:0070699"}


id: GO:1901896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["PMID:19708671","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"activation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"activation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"activation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"activation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"activation of calcium ABC transporter","type":"narrow"},{"name":"activation of calcium efflux ATPase","type":"narrow"},{"name":"activation of calcium pump","type":"broad"},{"name":"activation of calcium transporting ATPase activity","type":"exact"},{"name":"activation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"activation of calcium-transporting ATPase activity","type":"narrow"},{"name":"activation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"activation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"activation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"positive regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"positive regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium ABC transporter","type":"narrow"},{"name":"positive regulation of calcium efflux ATPase","type":"narrow"},{"name":"positive regulation of calcium pump","type":"broad"},{"name":"positive regulation of calcium transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"positive regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"positive regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"positive regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium ABC transporter","type":"narrow"},{"name":"up regulation of calcium efflux ATPase","type":"narrow"},{"name":"up regulation of calcium pump","type":"broad"},{"name":"up regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium ABC transporter","type":"narrow"},{"name":"up-regulation of calcium efflux ATPase","type":"narrow"},{"name":"up-regulation of calcium pump","type":"broad"},{"name":"up-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"upregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"upregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium ABC transporter","type":"narrow"},{"name":"upregulation of calcium efflux ATPase","type":"narrow"},{"name":"upregulation of calcium pump","type":"broad"},{"name":"upregulation of calcium transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"upregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"upregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"upregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"upregulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901896"}


id: PBO:0076187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 2","termid":"PBO:0076187"}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["RHEA:23820","EC:4.2.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00888","MetaCyc:GDPMANDEHYDRA-RXN","Reactome:R-HSA-6787632"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: PBO:0069531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 800, pseudogene","termid":"PBO:0069531"}


id: PBO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 3","termid":"PBO:0042590"}


id: PBO:0005381
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombe glycoprotease","termid":"PBO:0005381"}


id: PBO:0073378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 2","termid":"PBO:0073378"}


id: PR:O94684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmh1 gene.","definition_xrefs":["UniProtKB:O94684","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.18c","synonyms":[{"name":"CDK-activating kinase assembly factor MAT1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING finger protein pmh1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B 38 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p38 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmh1","type":"exact"}],"termid":"PR:O94684"}


id: GO:0018022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form either the mono-, di- or trimethylated derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine methylation","termid":"GO:0018022"}


id: PBO:0029996
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies_during_glucose_starvation","termid":"PBO:0029996"}


id: GO:0098714
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97119],"is_not":false,"summary":null,"term":"GO:0098714"}]},"cv_name":"biological_process","definition":"The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transport","termid":"GO:0071423"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"malate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097405"],"synonyms":[{"name":"malate import into cell","type":"exact"}],"termid":"GO:0098714","terms_by_termid":{"GO:0098714":null}}


id: GO:0050482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of arachidonic acid from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"arachidonate transport","termid":"GO:1903963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"arachidonic acid secretion","termid":"GO:0050482"}


id: GO:0103054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A12 + O2 + 2-oxoglutarate = gibberellin A15 + carbon dioxide + succinate.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin A12, 2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A15-forming)","secondary_identifiers":["RHEA:60776","MetaCyc:RXN1F-162"],"termid":"GO:0103054"}


id: PBO:0060503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 2","termid":"PBO:0060503"}


id: SO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_repetitive_element","synonyms":[{"name":"engineered foreign repetitive element","type":"exact"}],"termid":"SO:0000293"}


id: GO:0009131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate metabolic process","termid":"GO:0009129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"pyrimidine nucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine nucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009131"}


id: PBO:0042445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3 pseudogene 1","termid":"PBO:0042445"}


id: PBO:0027168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation","termid":"PBO:0027168"}


id: GO:0101024
data:
  {"annotated_genes":["SJAG_00680","SJAG_01050","SJAG_03783","SJAG_03073","SJAG_04464","SJAG_03892","SJAG_01745","SJAG_03449","SJAG_03891","SJAG_00900","SJAG_00416","SJAG_01242","SJAG_04489","SJAG_05207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114172,114440,114472],"is_not":false,"summary":null,"term":"GO:0101024"},{"annotations":[96901,89441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140515"},{"annotations":[114547,101923,91527,86986,114546,114548,96361,93488,98556,114549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007084"}]},"cv_name":"biological_process","definition":"A mitotic cell cycle process which results in the assembly, arrangement, or disassembly of the nuclear inner or outer membrane during mitosis.","definition_xrefs":["PMID:15147872","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03073":null,"SJAG_03449":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049"],"is_obsolete":false,"name":"mitotic nuclear membrane organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear membrane organization involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101024","terms_by_termid":{"GO:0007084":null,"GO:0101024":null,"GO:0140515":null}}


id: GO:0008859
data:
  {"annotated_genes":["SJAG_06586"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109619],"is_not":false,"summary":null,"term":"GO:0008859"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA + H2O = 5'-phosphomononucleotides. Cleaves RNA in the 3' to 5' direction.","definition_xrefs":["EC:3.1.13.1","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5' exonuclease activity","termid":"GO:0008408"},{"relation_name":"is_a","term_name":"RNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0004527","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exoribonuclease II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.13.1-RXN"],"synonyms":[{"name":"5'-exoribonuclease activity","type":"related"},{"name":"BN ribonuclease activity","type":"related"},{"name":"Escherichia coli exo-RNase II","type":"related"},{"name":"RNase II","type":"related"},{"name":"RNase II activity","type":"exact"},{"name":"ribonuclease II activity","type":"related"},{"name":"ribonuclease Q","type":"related"}],"termid":"GO:0008859","terms_by_termid":{"GO:0008859":null}}


id: PBO:0038746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 4 pseudogene 1","termid":"PBO:0038746"}


id: PBO:0081861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 793","termid":"PBO:0081861"}


id: RO:0002323
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A mereological relationship or a topological relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mereotopologically_related_to","termid":"RO:0002323"}


id: GO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photoreceptor cell fate commitment","termid":"GO:0046552"}


id: PBO:0029184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029184"}


id: GO:1905835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22065602","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to pyrimidine ribonucleotide","termid":"GO:1905835"}


id: PBO:0088998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0088998"}


id: GO:0110162
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110219],"is_not":false,"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["GOC:vw","PMID:27697865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation","termid":"GO:0032888"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation (spindle phase three)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110162","terms_by_termid":{"GO:0110162":null}}


id: PBO:0030594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_aspartate_level","termid":"PBO:0030594"}


id: PBO:0013841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary microcephaly","termid":"PBO:0013841"}


id: PBO:0049716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 2","termid":"PBO:0049716"}


id: PBO:0085351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid-binding protein that interacts with both Ypt7p and Vps33p; may partially counteract the action of Vps33p and vice versa, localizes to the rim of the vacuole as cells approach stationary phase; contains a putative inverse BAR (I-BAR) domain that can mold lipid bilayer membranes into protrusions","termid":"PBO:0085351"}


id: PBO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8A","termid":"PBO:0043664"}


id: PBO:0076203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 13","termid":"PBO:0076203"}


id: FYPO:0002619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium butyrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on sodium butyrate","synonyms":[{"name":"normal cell population growth in presence of sodium butyrate","type":"exact"},{"name":"normal cell population growth on sodium butyrate","type":"exact"},{"name":"normal cellular response to sodium butyrate","type":"related"},{"name":"normal vegetative cell population growth on sodium butyrate","type":"exact"}],"termid":"FYPO:0002619"}


id: GO:0035564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of a kidney.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney size","termid":"GO:0035564"}


id: PBO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.96","termid":"PBO:0002561"}


id: GO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification wherein bone tissue forms within ligamentous tissue.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ligamentous ossification","termid":"GO:0036076"}


id: SO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contiguous sequence derived from sequence assembly. Has no gaps, but may contain N's from unavailable bases.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"},{"relation_name":"part_of","term_name":"supercontig","termid":"SO:0000148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig","secondary_identifiers":["http://en.wikipedia.org/wiki/Contig"],"termid":"SO:0000149"}


id: GO:0033898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to 2',3'-cyclic nucleotides.","definition_xrefs":["EC:4.6.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140098","GO:0016788"],"is_obsolete":false,"name":"Bacillus subtilis ribonuclease activity","secondary_identifiers":["MetaCyc:RXN-19924"],"synonyms":[{"name":"proteus mirabilis RNase activity","type":"exact"},{"name":"ribonucleate nucleotido-2'-transferase (cyclizing) activity","type":"broad"}],"termid":"GO:0033898"}


id: MOD:01199
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to an N-heptosyl-L-arginine.","definition_xrefs":["Unimod:490#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-heptosyl-L-arginine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01199"}


id: PBO:0040587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-secretase 2","termid":"PBO:0040587"}


id: PBO:0004817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L19","termid":"PBO:0004817"}


id: PBO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 associated regulatory protein","termid":"PBO:0039642"}


id: PR:O13657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.12c gene.","definition_xrefs":["UniProtKB:O13657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C27B12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.12c","synonyms":[{"name":"Spom972h-SPBC27B12.12c","type":"exact"}],"termid":"PR:O13657"}


id: PBO:0084034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored aspartyl protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; shares functions with Yap3p and Kex2p; MKC7 has a paralog, YPS1, that arose from the whole genome duplication","termid":"PBO:0084034"}


id: PBO:0005559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit (predicted)","termid":"PBO:0005559"}


id: PBO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 11-55 (non-functional)","termid":"PBO:0051464"}


id: GO:0008554
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73184],"is_not":false,"summary":null,"term":"GO:0008554"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out); by a phosphorylative mechanism.","definition_xrefs":["PMID:9224683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"P-type sodium transporter activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:14633","EC:7.2.2.3","MetaCyc:RXN-17739"],"synonyms":[{"name":"Na(+)-exporting ATPase activity","type":"broad"},{"name":"Na(+)-transporting ATPase activity","type":"broad"},{"name":"Na+-exporting ATPase activity","type":"broad"},{"name":"Na+-transporting ATPase activity","type":"broad"},{"name":"sodium exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"sodium transport ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity","type":"broad"},{"name":"sodium-exporting ATPase activity, phosphorylative mechanism","type":"exact"},{"name":"sodium-translocating P-type ATPase activity","type":"exact"}],"termid":"GO:0008554","terms_by_termid":{"GO:0008554":null}}


id: PBO:0088118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in the vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; member of the serine carboxypeptidase family; N-glycosylated","termid":"PBO:0088118"}


id: GO:0016147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, elongation (obsolete GO:0016147)","synonyms":[{"name":"protein-synthesizing GTPase activity, elongation","type":"exact"}],"termid":"GO:0016147"}


id: PBO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 181 member A","termid":"PBO:0047147"}


id: GO:0052926
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86782],"is_not":false,"summary":null,"term":"GO:0052926"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->3)-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["EC:2.4.1.259","RHEA:29531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R06259","MetaCyc:RXN-5467"],"synonyms":[{"name":"dolichylphosphomannose-dependent ALG9 mannosyltransferase activity","type":"related"}],"termid":"GO:0052926","terms_by_termid":{"GO:0052926":null}}


id: GO:0000930
data:
  {"annotated_genes":["SJAG_02431","SJAG_07018","SJAG_01756","SJAG_03835","SJAG_02886","SJAG_00856","SJAG_02609","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104897,112286,93172,101803,95556,105847,104152,96448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000931"},{"annotations":[96449,104153,104898,105848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008275"}]},"cv_name":"cellular_component","definition":"A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species.","definition_xrefs":["GOC:clt","PMID:12134075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02431":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"gamma-tubulin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000930","terms_by_termid":{"GO:0000931":null,"GO:0008275":null}}


id: FYPO:0004265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cortical microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to cortical microtubule cytoskeleton","synonyms":[{"name":"abnormal protein localisation to cortical microtubule cytoskeleton","type":"exact"}],"termid":"FYPO:0004265"}


id: PBO:0080339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 103 pseudogene","termid":"PBO:0080339"}


id: PATO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"biological sex","termid":"PATO:0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenotypic sex","termid":"PATO:0001894"}


id: PBO:0091944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Knh2","termid":"PBO:0091944"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: PBO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SUB2","termid":"PBO:0002140"}


id: GO:0008999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-alanyl-peptide = CoA + H+ + N-terminal N-alpha-acetyl-L-alanyl-peptide.","definition_xrefs":["RHEA:43752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide alpha-N-acetyltransferase activity","termid":"GO:0004596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0034212","GO:0003824"],"is_obsolete":false,"name":"peptide-alanine-alpha-N-acetyltransferase activity","secondary_identifiers":["RHEA:43756","MetaCyc:2.3.1.128-RXN"],"synonyms":[{"name":"acetyl-CoA:ribosomal-protein-L-alanine N-acetyltransferase activity","type":"related"},{"name":"ribosomal protein S18 acetyltransferase activity","type":"related"},{"name":"ribosomal-protein-alanine N-acetyltransferase activity","type":"broad"}],"termid":"GO:0008999"}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: PBO:0046145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 6","termid":"PBO:0046145"}


id: PBO:0085055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; likely exists as tetramer, may be regulated by the binding of small-molecule ligands (possibly sulfate ions), may have a role in yeast cell-wall biogenesis","termid":"PBO:0085055"}


id: GO:0102706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butein 4'-beta-D-glucoside + O2 = aureusidin 6-O-beta-glucoside + H2O + H+.","definition_xrefs":["GOC:pz","RHEA:34203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"butein:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-6242","EC:1.21.3.6"],"termid":"GO:0102706"}


id: PBO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotrophin","termid":"PBO:0060143"}


id: PBO:0049078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 119","termid":"PBO:0049078"}


id: PBO:0027125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_heat","termid":"PBO:0027125"}


id: GO:2000056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000056)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"related"}],"termid":"GO:2000056"}


id: FYPO:0004647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to copper ion","synonyms":[{"name":"increased RNA accumulation during cellular response to copper ion","type":"related"},{"name":"increased RNA level during cellular response to copper","type":"exact"},{"name":"increased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"increased transcript level during cellular response to copper ion","type":"exact"}],"termid":"FYPO:0004647"}


id: MOD:01347
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and an L-lysine residue to form a Schiff-base or an Amadori ketosamine lysine adduct.","definition_xrefs":["PubMed:15279557","DeltaMass:0","Unimod:41#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose glycated L-lysine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01347"}


id: PBO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase","termid":"PBO:0000046"}


id: PBO:0054339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1732","termid":"PBO:0054339"}


id: PBO:0091033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd2","termid":"PBO:0091033"}


id: GO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ciliary neurotrophic factor (CNTF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ciliary neurotrophic factor-mediated signaling pathway","synonyms":[{"name":"CNTF-mediated signaling pathway","type":"exact"},{"name":"ciliary neurotrophic factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0070120"}


id: PBO:0062096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 46 pseudogene","termid":"PBO:0062096"}


id: PBO:0027991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_G2_phase","termid":"PBO:0027991"}


id: PBO:0048787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNA15 divergent transcript","termid":"PBO:0048787"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: GO:0060887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epidermis of the limb over time, from its formation to the mature structure. The limb epidermis is the outer epithelial layer of the limb, it is a complex stratified squamous epithelium.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin epidermis development","termid":"GO:0098773"},{"relation_name":"part_of","term_name":"limb development","termid":"GO:0060173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis development","termid":"GO:0060887"}


id: FYPO:0005098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of poly(A) polymerase activity (EC name polynucleotide adenylyltransferase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"abnormal poly(A) polymerase activity","synonyms":[{"name":"abnormal PAP activity","type":"exact"},{"name":"abnormal polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"FYPO:0005098"}


id: PBO:0085996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shares a promoter with YNL194C; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YNL195C has a paralog, HBT1, that arose from the whole genome duplication","termid":"PBO:0085996"}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: PBO:0082636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of GID Complex that confers ubiquitin ligase (U3) activity; necessary for polyubiquitination and degradation of the gluconeogenic enzyme fructose-1,6-bisphosphatase; forms dimer with Fyv10p that is then recruited to GID Complex by Gid8p; also required for sporulation; conserved protein that has a degenerate RING finger domain","termid":"PBO:0082636"}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: PBO:0088427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0088427"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: PBO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 22","termid":"PBO:0042161"}


id: GO:2000093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"}


id: PBO:0055790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 1","termid":"PBO:0055790"}


id: PBO:0028576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_farnesyltransferase_activity","termid":"PBO:0028576"}


id: PBO:0072772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A2","termid":"PBO:0072772"}


id: PBO:0062268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 4 pseudogene","termid":"PBO:0062268"}


id: GO:1990343
data:
  {"annotated_genes":["SJAG_01601"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114615],"is_not":false,"summary":null,"term":"GO:1990343"}]},"cv_name":"cellular_component","definition":"A region of heterochromatin that is formed dynamically under specific growth conditions by a process that requires RNAi, and is enriched in histone H3 methylated on lysine 9 (H3K9me).","definition_xrefs":["PMID:24210919","PMID:23151475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heterochromatin domain","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"HOOD","type":"exact"}],"termid":"GO:1990343","terms_by_termid":{"GO:1990343":null}}


id: PBO:0029735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_papulacandin_B","termid":"PBO:0029735"}


id: PBO:0087872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional co-repressor of MBF-regulated gene expression; Nrm1p associates stably with promoters via MCB binding factor (MBF) to repress transcription upon exit from G1 phase","termid":"PBO:0087872"}


id: PBO:0027320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027320"}


id: GO:0102395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9-cis-beta-carotene + O2 = 9-cis-10'-apo-beta-carotenal + beta-ionone.","definition_xrefs":["GOC:pz","EC:1.13.11.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"9-cis-beta-carotene 9',10'-cleavage oxygenase activity","secondary_identifiers":["RHEA:34399","MetaCyc:RXN-13642"],"termid":"GO:0102395"}


id: GO:0033528
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75589],"is_not":false,"summary":null,"term":"GO:0033528"}]},"cv_name":"biological_process","definition":"A cyclic series of interconversions involving S-methyl-L-methionine, S-adenosyl-L-homocysteine, S-adenosyl-L-methionine, L-homocysteine, and L-methionine. Converts the methionine group of adenosylmethionine back to free methionine, and may serve regulate the cellular adenosylmethionine level.","definition_xrefs":["MetaCyc:PWY-5441","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methylmethionine metabolic process","termid":"GO:0033477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"S-methylmethionine cycle","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0033528","terms_by_termid":{"GO:0033528":null}}


id: GO:0008664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between the 2'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another.","definition_xrefs":["GOC:mah","PMID:8940112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA ligase activity","termid":"GO:0008452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2'-5'-RNA ligase activity","synonyms":[{"name":"2'-5' RNA ligase activity","type":"exact"}],"termid":"GO:0008664"}


id: PBO:0052783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 20","termid":"PBO:0052783"}


id: PBO:0086851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative regulatory subunit of protein phosphatase Glc7p; involved in glycogen metabolism; contains a conserved motif (GVNK motif) that is also found in Gac1p, Pig1p, and Pig2p; GIP2 has a paralog, PIG2, that arose from the whole genome duplication","termid":"PBO:0086851"}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: PBO:0059946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 32","termid":"PBO:0059946"}


id: PR:Q9UUJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear elongation and deformation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.13","synonyms":[{"name":"Spom972h-ned1","type":"exact"}],"termid":"PR:Q9UUJ6"}


id: PR:000044743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe) that lacks ubiquitinated lysine.","definition_xrefs":["PRO:DAN","PMID:29975113","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dma1/UnUbiq","pombase_gene_id":"SPAC17G8.10c","synonyms":[{"name":"Spom-dma1/UnUbiq","type":"exact"},{"name":"dma1/UnUbiq","type":"exact"}],"termid":"PR:000044743"}


id: GO:0060338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060338"}


id: PBO:0054199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1579","termid":"PBO:0054199"}


id: GO:0032657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of interleukin-14 production (obsolete GO:0032657)","synonyms":[{"name":"regulation of IL-14 production","type":"exact"},{"name":"regulation of interleukin-14 biosynthetic process","type":"narrow"}],"termid":"GO:0032657"}


id: PBO:0024837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf4 (predicted)","termid":"PBO:0024837"}


id: GO:0010670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010670)","synonyms":[{"name":"positive regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010670"}


id: GO:0071437
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell projection that emerges from the ECM-facing surface of a cell, is enriched in actin and associated cytoskeletal proteins, and displays localized proteolytic activity toward the substrate.","definition_xrefs":["PMID:19491051","GOC:mah","PMID:16651416","PMID:19931459"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium (obsolete GO:0071437)","termid":"GO:0071437"}


id: PBO:0091748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1948954delA","termid":"PBO:0091748"}


id: GO:1901371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf morphogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of shoot system morphogenesis","termid":"GO:1900618"},{"relation_name":"is_a","term_name":"regulation of plant organ morphogenesis","termid":"GO:1905421"},{"relation_name":"regulates","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf morphogenesis","termid":"GO:1901371"}


id: PBO:0071786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribophorin II","termid":"PBO:0071786"}


id: PR:O94277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminodeoxychorismate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.29","synonyms":[{"name":"ADC synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P-aminobenzoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PABA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abz1","type":"exact"},{"name":"para-aminobenzoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94277"}


id: PBO:0028791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028791"}


id: PR:Q09895
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.08c","synonyms":[{"name":"Spom972h-SPAC24B11.08c","type":"exact"}],"termid":"PR:Q09895"}


id: PBO:0081009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 45","termid":"PBO:0081009"}


id: PBO:0034373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlaps_sequence_of","termid":"PBO:0034373"}


id: PBO:0076540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR adaptor interacting with endolysosomal SLC15A4","termid":"PBO:0076540"}


id: GO:0033699
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110821],"is_not":false,"summary":null,"term":"GO:0033699"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-AMP-DNA + H2O = AMP + DNA; nucleophilic release of a covalently linked adenylate residue from a DNA strand, leaving a 5' phosphate terminus.","definition_xrefs":["PMID:16547001","PMID:17276982","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' DNA exonuclease activity","termid":"GO:0035312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0004527","GO:0016788","GO:0003674","GO:0016787","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA 5'-adenosine monophosphate hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.71"],"synonyms":[{"name":"AMP-removal activity","type":"related"},{"name":"DNA 5'-adenylate hydrolase activity","type":"exact"},{"name":"DNA adenylate hydrolysis activity","type":"broad"},{"name":"DNA de-adenylation","type":"related"},{"name":"DNA deadenylation","type":"related"}],"termid":"GO:0033699","terms_by_termid":{"GO:0033699":null}}


id: GO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroid hormones,compounds with a 1, 2, cyclopentanoperhydrophenanthrene nucleus that act as hormones.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"}


id: GO:0060346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"skeletal system morphogenesis","termid":"GO:0048705"},{"relation_name":"part_of","term_name":"bone trabecula morphogenesis","termid":"GO:0061430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula formation","synonyms":[{"name":"bone trabecula biogenesis","type":"related"},{"name":"bone trabeculation","type":"exact"},{"name":"skeletal trabecula biogenesis","type":"related"},{"name":"skeletal trabecula formation","type":"exact"},{"name":"skeletal trabeculation","type":"exact"}],"termid":"GO:0060346"}


id: PBO:0064900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit B'epsilon","termid":"PBO:0064900"}


id: GO:0006544
data:
  {"annotated_genes":["SJAG_01271","SJAG_02901","SJAG_03914","SJAG_03861","SJAG_03290","SJAG_01766","SJAG_03641","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[72148,73134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[93393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006546"},{"annotations":[76957,91955,73656,83192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_01766":null,"SJAG_02450":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycine metabolism","type":"exact"}],"termid":"GO:0006544","terms_by_termid":{"GO:0006545":null,"GO:0006546":null,"GO:0019264":null,"GO:0019464":null}}


id: GO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tissue remodeling","synonyms":[{"name":"regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034103"}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: GO:0006401
data:
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id: PBO:0060986
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id: PBO:0080510
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id: FYPO:0001367
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id: GO:0070700
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id: GO:1990052
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id: PBO:0071316
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id: PBO:0057591
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id: PBO:0050551
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id: PBO:0030910
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id: GO:0030718
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id: PBO:0033775
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id: PBO:0061391
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id: PBO:0079611
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id: GO:0043236
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id: PBO:0004639
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id: GO:0001567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + cholesterol + O2 = 25-hydroxycholesterol + A + H2O.","definition_xrefs":["EC:1.14.99.38","RHEA:21104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 25-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.99.38-RXN","KEGG_REACTION:R07218"],"synonyms":[{"name":"cholesterol 25-monooxygenase activity","type":"related"},{"name":"cholesterol,hydrogen-donor:oxygen oxidoreductase (25-hydroxylating) activity","type":"related"}],"termid":"GO:0001567"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["GOC:TermGenie","PMID:22375062","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0073872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member C2 (putative)","termid":"PBO:0073872"}


id: PBO:0078223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-1","termid":"PBO:0078223"}


id: PBO:0002116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan","termid":"PBO:0002116"}


id: PBO:0038523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (Junior blood group)","termid":"PBO:0038523"}


id: GO:0048694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an injured axon.","definition_xrefs":["GOC:dph","GOC:jid","GOC:lm","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of injured axon","synonyms":[{"name":"activation of collateral sprouting of injured axon","type":"narrow"},{"name":"stimulation of collateral sprouting of injured axon","type":"narrow"},{"name":"up regulation of collateral sprouting of injured axon","type":"exact"},{"name":"up-regulation of collateral sprouting of injured axon","type":"exact"},{"name":"upregulation of collateral sprouting of injured axon","type":"exact"}],"termid":"GO:0048694"}


id: PBO:0061292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 3","termid":"PBO:0061292"}


id: PBO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm2","termid":"PBO:0001989"}


id: PBO:0072568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras responsive element binding protein 1","termid":"PBO:0072568"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: GO:0140725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of free heme. These include transport of heme away from sensitive areas and to compartments or complexes whose purpose is sequestration of heme.","definition_xrefs":["PMID:26741528","PMID:32983129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of free heme","synonyms":[{"name":"free heme detoxification","type":"exact"}],"termid":"GO:0140725"}


id: GO:0006131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrolipoamide reduction (obsolete GO:0006131)","synonyms":[{"name":"dihydrolipoamide reduction","type":"exact"}],"termid":"GO:0006131"}


id: PBO:0045606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 17 (pseudogene)","termid":"PBO:0045606"}


id: PBO:0048553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 2","termid":"PBO:0048553"}


id: PBO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein alpha subunit","termid":"PBO:0002590"}


id: SO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with metal ions.","definition_xrefs":["UniProt:curation_manual","SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal_binding_site","termid":"SO:0001656"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_metal_contact","secondary_identifiers":["BS:00027"],"synonyms":[{"name":"metal_binding","type":"related"}],"termid":"SO:0001092"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[114585],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: PBO:0017679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain (predicted)","termid":"PBO:0017679"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: PBO:0011423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, zf-fungal binuclear cluster type","termid":"PBO:0011423"}


id: GO:2001192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation involved in immune response","termid":"GO:2001191"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"negative regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"negative regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001192"}


id: GO:0031262
data:
  {"annotated_genes":["SJAG_02814","SJAG_00794","SJAG_03683","SJAG_04076"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74446,75148,75176,76159],"is_not":false,"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"An essential outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis.","definition_xrefs":["PMID:34810257","PMID:28502666","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_02814":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0000776"],"is_obsolete":false,"name":"Ndc80 complex","references_by_uniquename":{"PMID:21873635":null},"synonyms":[{"name":"Nuf2-Ndc80 complex","type":"exact"}],"termid":"GO:0031262","terms_by_termid":{"GO:0031262":null}}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: PBO:0039554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 1","termid":"PBO:0039554"}


id: GO:0021983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pituitary gland development","synonyms":[{"name":"hypophysis development","type":"related"}],"termid":"GO:0021983"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: PBO:0083691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme of 'de novo' purine biosynthesis; contains both 5-aminoimidazole-4-carboxamide ribonucleotide transformylase and inosine monophosphate cyclohydrolase activities; ADE17 has a paralog, ADE16, that arose from the whole genome duplication; ade16 ade17 mutants require adenine and histidine","termid":"PBO:0083691"}


id: GO:0035099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a hemocyte within the embryo. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. In Drosophila, embryonic hemocytes originate from the head mesoderm as a cluster of cells. The cluster splits into two and one group of cells crosses the amnioserosa. Both populations then spread toward the middle of the embryo and then disperse evenly throughout the embryo.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","PMID:12885551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte migration","synonyms":[{"name":"arthropod blood cell migration","type":"exact"},{"name":"hemocyte cell migration","type":"exact"}],"termid":"GO:0035099"}


id: GO:0008390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: testosterone + donor-H2 + O2 = 16-alpha-hydroxytestosterone + H2O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"testosterone 16-alpha-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP2B10","type":"narrow"},{"name":"cytochrome P450 CYP2B9","type":"narrow"},{"name":"cytochrome P450 CYP2D10","type":"narrow"},{"name":"cytochrome P450 CYP2D11","type":"narrow"},{"name":"cytochrome P450 CYP2D9","type":"narrow"}],"termid":"GO:0008390"}


id: GO:0060374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a mast cell. A mast cell is a cell that is found in almost all tissues containing numerous basophilic granules and capable of releasing large amounts of histamine and heparin upon activation.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell differentiation","termid":"GO:0060374"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: PBO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 2","termid":"PBO:0043588"}


id: PBO:0054726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2135","termid":"PBO:0054726"}


id: FYPO:0008157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal at the silent-mating type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone deacetylation during vegetative growth","termid":"FYPO:0000201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone deacetylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008157"}


id: GO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of alpha-amylase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0003674","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"alpha-amylase inhibitor activity","termid":"GO:0015066"}


id: GO:0033941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D- and (1->6)-alpha-D- linkages in mannan, releasing D-mannose.","definition_xrefs":["EC:3.2.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mannan exo-1,2-1,6-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.137-RXN"],"synonyms":[{"name":"1,2-1,6-alpha-D-mannan D-mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,6-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033941"}


id: GO:0140648
data:
  {"annotated_genes":["SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111620,113282],"is_not":false,"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:22375066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"positively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140648","terms_by_termid":{"GO:0140648":null}}


id: PBO:0043931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRPPA antisense RNA 1","termid":"PBO:0043931"}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: PBO:0074692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 70B","termid":"PBO:0074692"}


id: PBO:0042274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8","termid":"PBO:0042274"}


id: PBO:0057340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 526a-1","termid":"PBO:0057340"}


id: GO:1905744
data:
  {"annotated_genes":["SJAG_01511","SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94084],"is_not":false,"summary":null,"term":"GO:1905744"},{"annotations":[113464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["PMID:2880558","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01040":null,"SJAG_01511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"regulation of nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"regulation of splicing","type":"broad"}],"termid":"GO:1905744","terms_by_termid":{"GO:1905744":null,"GO:1905746":null}}


id: PBO:0055382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2812","termid":"PBO:0055382"}


id: PBO:0042728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein F","termid":"PBO:0042728"}


id: PR:O94353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apq12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein apq12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.04","synonyms":[{"name":"Spom972h-apq12","type":"exact"}],"termid":"PR:O94353"}


id: PBO:0046307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectodermal-neural cortex 1","termid":"PBO:0046307"}


id: GO:0019583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactonate, the anion of galactonic acid, an organic acid derived from the sugar galactose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonic acid metabolic process","termid":"GO:0019520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactonate metabolic process","synonyms":[{"name":"galactonate metabolism","type":"exact"}],"termid":"GO:0019583"}


id: PBO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2481","termid":"PBO:0055065"}


id: PBO:0052848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-4","termid":"PBO:0052848"}


id: GO:0006009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into glucose 1-phosphate to produce glucose bisphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"glucose 1-phosphate metabolic process","termid":"GO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose 1-phosphate phosphorylation","termid":"GO:0006009"}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: GO:1902141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["PMID:16496115","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to inositol","termid":"GO:1902140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to inositol","termid":"GO:1902141"}


id: PR:Q9UT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NUBP2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23264:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor SPAC806.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.02c","secondary_identifiers":["UniProtKB:Q9UT57"],"synonyms":[{"name":"Spom972h-NUBP2","type":"exact"}],"termid":"PR:Q9UT57"}


id: PBO:0091725
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene was called cdc2L (cdc2 left) in PMID:16453669, name not added as potentially misleading","termid":"PBO:0091725"}


id: PBO:0079075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-3","termid":"PBO:0079075"}


id: PBO:0069657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 934, pseudogene","termid":"PBO:0069657"}


id: PBO:0087236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Separase/separin, a caspase-like cysteine protease; cleaves Mcd1p/Scc1p, a mitotic cohesin complex subunit, resulting in the dissociation of cohesin from chromatin and sister chromatid separation; cleaves meiotic-cohesin subunit Rec8p along chromosome arms in meiosis I and at centromeric sites during meiosis II; inhibits PP2A-Cdc55p to promote mitotic exit; inhibited by Pds1p (securin); relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087236"}


id: GO:0102747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + chlorophyllide a(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate(3-) = geranylgeranyl-chlorophyll a + diphosphoric acid.","definition_xrefs":["EC:2.5.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase activity","secondary_identifiers":["MetaCyc:RXN-7663"],"termid":"GO:0102747"}


