# terms

id: PR:Q9P7P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.07c gene.","definition_xrefs":["UniProtKB:Q9P7P8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.07c","synonyms":[{"name":"Spom972h-SPAC186.07c","type":"exact"}],"termid":"PR:Q9P7P8"}


id: GO:0043132
data:
  {"annotated_genes":["SJAG_04328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of nicotinamide adenine dinucleotide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore; transport may be of either the oxidized form, NAD, or the reduced form, NADH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"NAD transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) transport","type":"exact"},{"name":"NAD (reduced) transport","type":"exact"},{"name":"NADH transport","type":"exact"},{"name":"nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"oxidized NAD transport","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide transport","type":"exact"},{"name":"reduced NAD transport","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide transport","type":"exact"}],"termid":"GO:0043132","terms_by_termid":{"GO:1990549":null}}


id: PBO:0041320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 72","termid":"PBO:0041320"}


id: PBO:0086971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of Cdc7p-Dbf4p kinase complex; required for Cdc7p kinase activity and initiation of DNA replication; phosphorylates the Mcm2-7 family of proteins; cell cycle regulated; relative distribution to the nucleus increases upon DNA replication stress; co-expression of human CDC7 and DBF4 complements single cdc7 or dbf4 null mutations or the cdc7 dbf4 double null mutation","termid":"PBO:0086971"}


id: FYPO:0000587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore formation begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000121","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of sporulation","synonyms":[{"name":"delayed onset of ascospore formation","type":"exact"},{"name":"delayed sporulation","type":"exact"},{"name":"sporulation: delayed","type":"related"}],"termid":"FYPO:0000587"}


id: GO:1904600
data:
  {"annotated_genes":["SJAG_02989","SJAG_01894","SJAG_01993","SJAG_02864","SJAG_01943","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84006,88123,93809,94409,94488,109514],"is_not":false,"summary":null,"term":"GO:1904600"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an actin fusion focus.","definition_xrefs":["GOC:TermGenie","PMID:25825517","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"part_of","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085","GO:0000747"],"is_obsolete":false,"name":"mating projection actin fusion focus assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin fusion focus assembly","type":"broad"},{"name":"actin fusion focus formation","type":"exact"}],"termid":"GO:1904600","terms_by_termid":{"GO:1904600":null}}


id: PBO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member B","termid":"PBO:0046886"}


id: GO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune effector process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"negatively_regulates","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune effector process","synonyms":[{"name":"down regulation of immune effector process","type":"exact"},{"name":"down-regulation of immune effector process","type":"exact"},{"name":"downregulation of immune effector process","type":"exact"},{"name":"inhibition of immune effector process","type":"narrow"}],"termid":"GO:0002698"}


id: GO:0045939
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of steroid metabolic process","type":"exact"},{"name":"down-regulation of steroid metabolic process","type":"exact"},{"name":"downregulation of steroid metabolic process","type":"exact"},{"name":"inhibition of steroid metabolic process","type":"narrow"},{"name":"negative regulation of steroid metabolism","type":"exact"}],"termid":"GO:0045939","terms_by_termid":{"GO:0010895":null}}


id: FYPO:0001951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of calcium ions out of a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal calcium export","synonyms":[{"name":"abnormal calcium efflux from cell","type":"exact"},{"name":"abnormal calcium export during mitotic cell cycle","type":"related"},{"name":"abnormal calcium export during vegetative growth","type":"exact"},{"name":"abnormal calcium export from cell","type":"narrow"},{"name":"abnormal calcium ion export","type":"exact"},{"name":"abnormal calcium ion export from cell","type":"exact"},{"name":"abnormal cellular calcium export","type":"exact"}],"termid":"FYPO:0001951"}


id: GO:0043537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell migration","termid":"GO:0010596"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell migration","termid":"GO:0043535"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell migration","termid":"GO:0043534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell migration","synonyms":[{"name":"down regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell migration","type":"exact"},{"name":"downregulation of blood vessel endothelial cell migration","type":"exact"},{"name":"inhibition of blood vessel endothelial cell migration","type":"narrow"}],"termid":"GO:0043537"}


id: PBO:0057293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 511","termid":"PBO:0057293"}


id: GO:0032069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclease activity","synonyms":[{"name":"nuclease regulator activity","type":"related"}],"termid":"GO:0032069"}


id: PBO:0002153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex ATPase subunit Get3 (predicted)","termid":"PBO:0002153"}


id: PBO:0109600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 family member B, pseudogene","termid":"PBO:0109600"}


id: PBO:0076696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation regulator 1","termid":"PBO:0076696"}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: GO:0045009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.","definition_xrefs":["PMID:8970154","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chitosome","termid":"GO:0045009"}


id: PR:Q9UTE9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11038:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.03c","secondary_identifiers":["UniProtKB:Q9UTE9"],"synonyms":[{"name":"SPAC222.03c","type":"related"},{"name":"Spom972h-TIMM10","type":"exact"}],"termid":"PR:Q9UTE9"}


id: FYPO:0004160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the meiotic spindle is normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal spindle","termid":"FYPO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic spindle","synonyms":[{"name":"normal spindle during meiosis","type":"exact"},{"name":"normal spindle during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004160"}


id: FYPO:0003358
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to miconazole. Cells stop growing (and may die) at a concentration of miconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to miconazole","synonyms":[{"name":"hypersensitive to miconazole","type":"exact"},{"name":"sensitive to miconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to miconazole during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003358"}


id: PBO:0045996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 3","termid":"PBO:0045996"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: PBO:0065590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 6","termid":"PBO:0065590"}


id: GO:0004167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate.","definition_xrefs":["EC:5.3.3.12","RHEA:13041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"dopachrome isomerase activity","secondary_identifiers":["MetaCyc:DOPACHROME-DELTA-ISOMERASE-RXN","KEGG_REACTION:R03673","GO:0048059"],"synonyms":[{"name":"DCF activity","type":"related"},{"name":"DCT activity","type":"related"},{"name":"L-dopachrome isomerase activity","type":"related"},{"name":"L-dopachrome keto-enol isomerase activity","type":"related"},{"name":"L-dopachrome-methyl ester tautomerase activity","type":"related"},{"name":"TRP activity","type":"related"},{"name":"TRP-1","type":"related"},{"name":"TRP-2","type":"related"},{"name":"TRP2","type":"related"},{"name":"dopachrome Delta(7),Delta(2)-isomerase activity","type":"related"},{"name":"dopachrome conversion activity","type":"broad"},{"name":"dopachrome conversion factor activity","type":"broad"},{"name":"dopachrome delta-isomerase activity","type":"exact"},{"name":"dopachrome delta7,Delta2-isomerase activity","type":"related"},{"name":"dopachrome keto-enol isomerase activity","type":"related"},{"name":"dopachrome oxidoreductase activity","type":"related"},{"name":"dopachrome rearranging enzyme activity","type":"related"},{"name":"dopachrome tautomerase activity","type":"related"},{"name":"dopachrome-rearranging enzyme","type":"related"},{"name":"tryosinase-related protein-2","type":"related"},{"name":"tyrosinase-related protein 2 activity","type":"related"}],"termid":"GO:0004167"}


id: GO:0002849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"regulates","term_name":"peripheral T cell tolerance induction","termid":"GO:0002458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"}


id: PBO:0067741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 40","termid":"PBO:0067741"}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: PBO:0067348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 445, pseudogene","termid":"PBO:0067348"}


id: PBO:0063955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1","termid":"PBO:0063955"}


id: PR:O14226
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["UniProtKB:O14226","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: PBO:0088363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Greatwall kinase Ppk18","termid":"PBO:0088363"}


id: GO:0042158
data:
  {"annotated_genes":["SJAG_02913","SJAG_05278","SJAG_02903","SJAG_00068","SJAG_00846","SJAG_01227","SJAG_03115","SJAG_06425","SJAG_03672","SJAG_04975","SJAG_04119","SJAG_00059","SJAG_00831","SJAG_05327","SJAG_03292","SJAG_02488","SJAG_02523","SJAG_06309","SJAG_06383","SJAG_03066","SJAG_00295","SJAG_02776","SJAG_03878","SJAG_05219","SJAG_04337","SJAG_02804","SJAG_01416","SJAG_04924","SJAG_01860","SJAG_04881","SJAG_03506","SJAG_04165","SJAG_03801"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74085,87036,71088,74075,109149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[74919,88600,75554,74900,111279,77180,84651,70142,85256,74362,76786,102079,109962,72907,76634,71319,99181,70783,76481,76337,71835,75595,106846,73036,76482,112333],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006506"},{"annotations":[105935,85781],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061739"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"},{"relation_name":"is_a","term_name":"organonitrogen compound biosynthetic process","termid":"GO:1901566"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00068":null,"SJAG_00295":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06309":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"lipoprotein anabolism","type":"exact"},{"name":"lipoprotein biosynthesis","type":"exact"},{"name":"lipoprotein formation","type":"exact"},{"name":"lipoprotein synthesis","type":"exact"}],"termid":"GO:0042158","terms_by_termid":{"GO:0006506":null,"GO:0016255":null,"GO:0061739":null}}


id: GO:0008565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of proteins into, out of or within a cell, or between cells.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete protein transporter activity (obsolete GO:0008565)","synonyms":[{"name":"enzyme transporter activity","type":"narrow"},{"name":"holin","type":"related"},{"name":"protein transport chaperone","type":"narrow"},{"name":"secretin","type":"related"}],"termid":"GO:0008565"}


id: GO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of cytidine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"wobble position cytosine ribose methylation","termid":"GO:0002131"}


id: FYPO:0003014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring disassembly is decreased. Contractile ring disassembly is the part of cytokinesis in which the actomyosin contractile ring is disaggregated into its constituent components.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring disassembly","termid":"FYPO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000032","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring disassembly","synonyms":[{"name":"decreased rate of actomyosin contractile ring disassembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring disassembly during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring disassembly","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring disassembly","type":"exact"},{"name":"decreased rate of mitotic contractile ring disassembly","type":"exact"},{"name":"reduced rate of actomyosin contractile ring disassembly","type":"exact"}],"termid":"FYPO:0003014"}


id: PBO:0066708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 5","termid":"PBO:0066708"}


id: GO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"negatively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell differentiation","synonyms":[{"name":"down regulation of muscle cell differentiation","type":"exact"},{"name":"down-regulation of muscle cell differentiation","type":"exact"},{"name":"downregulation of muscle cell differentiation","type":"exact"},{"name":"inhibition of muscle cell differentiation","type":"narrow"}],"termid":"GO:0051148"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: PBO:0111284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_characteristic","termid":"PBO:0111284"}


id: PBO:0109079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3103","termid":"PBO:0109079"}


id: PBO:0086455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication","termid":"PBO:0086455"}


id: FYPO:0003709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type less strongly or to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased agglutination","synonyms":[{"name":"decreased agglutination involved in conjugation with cellular fusion","type":"exact"},{"name":"reduced agglutination","type":"exact"}],"termid":"FYPO:0003709"}


id: PBO:0090096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK cascade adaptor protein Ste4","termid":"PBO:0090096"}


id: GO:0005684
data:
  {"annotated_genes":["SJAG_03210","SJAG_03469","SJAG_03430","SJAG_02558","SJAG_02455","SJAG_00206","SJAG_03983","SJAG_00249","SJAG_02560","SJAG_03112","SJAG_00363","SJAG_01152","SJAG_02078","SJAG_05349","SJAG_04163","SJAG_05009","SJAG_00414","SJAG_00058","SJAG_00577","SJAG_02185","SJAG_00076","SJAG_02722","SJAG_01810","SJAG_04117","SJAG_01870","SJAG_00094","SJAG_03301","SJAG_01301","SJAG_02304","SJAG_03427","SJAG_03995","SJAG_00809","SJAG_00498","SJAG_00322","SJAG_05025","SJAG_00147","SJAG_01452","SJAG_05240","SJAG_01214","SJAG_00474","SJAG_01008","SJAG_02844","SJAG_04214","SJAG_16453","SJAG_03547","SJAG_00859","SJAG_00225","SJAG_02279","SJAG_04898","SJAG_01654","SJAG_00911","SJAG_04783","SJAG_01504","SJAG_04318","SJAG_03993","SJAG_00602","SJAG_00504","SJAG_02227","SJAG_04911","SJAG_03966","SJAG_00597"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71256,74753,75188,76550,77305,78503,83542,84259,91362,91722,93204,98432,99887,99917,100232,102517,106528,109069,113047,113922],"is_not":false,"summary":null,"term":"GO:0005684"},{"annotations":[108480,72100,78104,113753,96710,87196,93362,76049,77916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000243"},{"annotations":[70912,73040,76830,76355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071006"},{"annotations":[76356,78039,76831,71932,76887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071007"},{"annotations":[104178,77565,85881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071008"},{"annotations":[76453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071021"},{"annotations":[100995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071005"},{"annotations":[107595,70190,78106,105339,72102,96713,104803,77594,90745,100883,75088,91880,108484,105909,73532,104081,75935,101767,113756,91166,107874,97193,101238,109058,97969,93365,88977,70765,72200,102297,72956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron that has canonical consensus sequences near the 5' and 3' ends.","definition_xrefs":["GOC:mah","GOC:krc","PMID:11343900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00206":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00602":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01152":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01870":null,"SJAG_02078":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02558":null,"SJAG_02560":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03301":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U2-type spliceosomal complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"GT-AG spliceosome","type":"narrow"},{"name":"major (U2-type) spliceosomal complex","type":"exact"},{"name":"major spliceosomal complex","type":"exact"}],"termid":"GO:0005684","terms_by_termid":{"GO:0000243":null,"GO:0005684":null,"GO:0071004":null,"GO:0071005":null,"GO:0071006":null,"GO:0071007":null,"GO:0071008":null,"GO:0071021":null}}


id: PBO:0028501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_UDP-galactose_transmembrane_transport","termid":"PBO:0028501"}


id: GO:0004612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + oxaloacetate = ADP + CO2 + H+ + phosphoenolpyruvate.","definition_xrefs":["EC:4.1.1.49","RHEA:18617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase (ATP) activity","secondary_identifiers":["KEGG_REACTION:R00341","MetaCyc:PEPCARBOXYKIN-RXN"],"synonyms":[{"name":"ATP:oxaloacetate carboxy-lyase (transphosphorylating)","type":"related"},{"name":"ATP:oxaloacetate carboxy-lyase (transphosphorylating; phosphoenolpyruvate-forming)","type":"related"},{"name":"PEPCK (ATP)","type":"related"},{"name":"PEPK","type":"related"},{"name":"phosphoenolpyruvate carboxylase (ATP)","type":"related"},{"name":"phosphoenolpyruvic carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase","type":"broad"},{"name":"phosphopyruvate carboxykinase (adenosine triphosphate)","type":"related"},{"name":"phosphopyruvate carboxylase (ATP)","type":"related"}],"termid":"GO:0004612"}


id: PBO:0081317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 101","termid":"PBO:0081317"}


id: PBO:0086292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ER delivery of tail-anchored membrane proteins; interacts with Sgt2p; binds to the TRC complex, which inserts proteins into the ER membrane; interacts with Msn5p karyopherin; YBR137W is not an essential gene","termid":"PBO:0086292"}


id: GO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone of a dopaminergic neuron to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:PARL","PMID:21106844","PMID:23517308","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron axon guidance","synonyms":[{"name":"DA axon guidance","type":"exact"},{"name":"dopaminergic axon guidance","type":"exact"},{"name":"mdDA axon guidance","type":"exact"}],"termid":"GO:0036514"}


id: PATO:0001638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A necessity quality inhering in a process by virtue of the bearer's being essential or indispensable.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necessity of occurrent","termid":"PATO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessary (occurrent)","termid":"PATO:0001638"}


id: PBO:0086076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion","termid":"PBO:0086076"}


id: GO:1901698
data:
  {"annotated_genes":["SJAG_04384","SJAG_04063","SJAG_04583","SJAG_01134","SJAG_01051","SJAG_00126","SJAG_02694","SJAG_04429","SJAG_01626","SJAG_04345","SJAG_01854","SJAG_03841","SJAG_07000","SJAG_02539","SJAG_01585","SJAG_00530","SJAG_03288","SJAG_04612","SJAG_02685","SJAG_00131","SJAG_00931","SJAG_01768","SJAG_04571","SJAG_01709","SJAG_03345","SJAG_00941","SJAG_00403","SJAG_03032","SJAG_01858","SJAG_00627","SJAG_05274","SJAG_00948","SJAG_03153","SJAG_04904","SJAG_03657","SJAG_05022","SJAG_00790","SJAG_00681","SJAG_02774","SJAG_03227"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97656,83172],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070458"},{"annotations":[103447,107224,85368,96236,85647,92507,90554,85250,93742,100662,98814,83560,112256,108199,100123,98345,87043,103508,88309,73401,108674,110997,88697,90086,89175,99382,108968,111534,90300,104865,103025,111725,100203,110908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[74863,77745],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[89153,91277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00131":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00627":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_00931":null,"SJAG_00941":null,"SJAG_00948":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01585":null,"SJAG_01626":null,"SJAG_01709":null,"SJAG_01768":null,"SJAG_01854":null,"SJAG_01858":null,"SJAG_02539":null,"SJAG_02685":null,"SJAG_02694":null,"SJAG_02774":null,"SJAG_03032":null,"SJAG_03153":null,"SJAG_03227":null,"SJAG_03288":null,"SJAG_03345":null,"SJAG_03657":null,"SJAG_03841":null,"SJAG_04063":null,"SJAG_04345":null,"SJAG_04384":null,"SJAG_04429":null,"SJAG_04571":null,"SJAG_04583":null,"SJAG_04612":null,"SJAG_04904":null,"SJAG_05022":null,"SJAG_05274":null,"SJAG_07000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901698","terms_by_termid":{"GO:0030970":null,"GO:0036503":null,"GO:0070458":null,"GO:0097466":null}}


id: PBO:0108613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member C, pseudogene","termid":"PBO:0108613"}


id: PBO:0040024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 12","termid":"PBO:0040024"}


id: PBO:0041952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 3","termid":"PBO:0041952"}


id: FYPO:0003087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at a replication fork barrier in the mating-type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding at mating-type region replication fork barrier","termid":"FYPO:0003087"}


id: PBO:0027199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_orientation_correction","termid":"PBO:0027199"}


id: PBO:0053149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 5","termid":"PBO:0053149"}


id: GO:0050483
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70219],"is_not":false,"summary":null,"term":"GO:0050483"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-nucleotidase activity","termid":"GO:0008253"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"IMP 5'-nucleotidase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["MetaCyc:RXN-7607","RHEA:27718"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483","terms_by_termid":{"GO:0050483":null}}


id: PBO:0053757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 999","termid":"PBO:0053757"}


id: PBO:0027271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0027271"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["ISBN:0781735149","GOC:jal","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: PBO:0065751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYDC2 antisense RNA 1","termid":"PBO:0065751"}


id: PBO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1","termid":"PBO:0044887"}


id: GO:2000700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myoblast differentiation","termid":"GO:0045663"},{"relation_name":"is_a","term_name":"positive regulation of cardioblast differentiation","termid":"GO:0051891"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"positively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"positive regulation of cardiac myoblast differentiation","type":"related"},{"name":"positive regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000700"}


id: GO:0102933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-4-amino-4,6-dideoxy-alpha-D-mannose + 2-oxoglutarate = GDP-4-dehydro-6-deoxy-alpha-D-mannose + L-glutamate.","definition_xrefs":["GOC:pz","RHEA:36779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose-4-aminotransferase activity","secondary_identifiers":["EC:2.6.1.102","MetaCyc:RXN-8953"],"termid":"GO:0102933"}


id: PBO:0011463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER signal peptide peptidase (predited)","termid":"PBO:0011463"}


id: GO:0009782
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The antenna complex of photosystem I. A photosystem has two closely linked components, an antenna containing light-absorbing pigments and a reaction center. Each antenna contains one or more light-harvesting complexes (LHCs).","definition_xrefs":["GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem I antenna complex","termid":"GO:0009782"}


id: PBO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.5","termid":"PBO:0002224"}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: PBO:0076191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 2","termid":"PBO:0076191"}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:19539744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0044248","GO:0006629","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: GO:0034912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phthalate 3,4-cis-dihydrodiol + NAD+ = 3,4-dihydroxyphthalate + NADH + H+.","definition_xrefs":["UM-BBD_reactionID:r1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"phthalate 3,4-cis-dihydrodiol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN5F9-56"],"termid":"GO:0034912"}


id: PBO:0048410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin","termid":"PBO:0048410"}


id: GO:0016728
data:
  {"annotated_genes":["SJAG_02948","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102611,88057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051063"},{"annotations":[71875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004748"},{"annotations":[71872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008998"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a disulfide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02948":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["EC:1.17.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on CH or CH2 groups, disulphide as acceptor","type":"exact"}],"termid":"GO:0016728","terms_by_termid":{"GO:0004748":null,"GO:0008998":null,"GO:0051063":null}}


id: GO:0044794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism activates or increases the frequency, rate or extent of the release of a process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral process","termid":"GO:0044788"},{"relation_name":"positively_regulates","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of viral process","termid":"GO:0044794"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: GO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan biosynthetic process","termid":"GO:0006024"},{"relation_name":"is_a","term_name":"heparin metabolic process","termid":"GO:0030202"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"heparin biosynthetic process","synonyms":[{"name":"heparan sulfate biosynthetic process","type":"related"},{"name":"heparin anabolism","type":"exact"},{"name":"heparin biosynthesis","type":"exact"},{"name":"heparin formation","type":"exact"},{"name":"heparin synthesis","type":"exact"}],"termid":"GO:0030210"}


id: PBO:0058614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6746","termid":"PBO:0058614"}


id: FYPO:0002866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tryptone. Cells stop growing (and may die) at a concentration of tryptone that allows wild type cells to grow. Tryptone is a mixture of peptides produced by digestion of casein with trypsin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tryptone","synonyms":[{"name":"hypersensitive to tryptone","type":"exact"},{"name":"sensitive to tryptone during mitotic cell cycle","type":"related"},{"name":"sensitive to tryptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002866"}


id: FYPO:0006107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which haploid cells mate and undergo meiotic nuclear division and sporulation in the presence of nutrients, notably nitrogen and glucose. Normally, fission yeast mate, undergo meiosis, and sporulate only under conditions of nitrogen and carbon starvation.","definition_xrefs":["PMID:27613427","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mating, meiosis, and sporulation without starvation","synonyms":[{"name":"conjugation, meiosis, and sporulation without starvation","type":"exact"},{"name":"deregulated sporulation","type":"related"},{"name":"mating, meiotic nuclear division, and sporulation without starvation","type":"exact"},{"name":"meiotic cell cycle in presence of nutrients","type":"exact"},{"name":"meiotic cell cycle without starvation","type":"exact"},{"name":"sporulation in presence of nutrients","type":"related"}],"termid":"FYPO:0006107"}


id: PBO:0045010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIO3 opposite strand upstream RNA","termid":"PBO:0045010"}


id: GO:0021663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 4. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","GOC:curators","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 formation","termid":"GO:0021663"}


id: PBO:0063010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 2","termid":"PBO:0063010"}


id: PBO:0073740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 7","termid":"PBO:0073740"}


id: PBO:0016892
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AUreobasidin A Resistance","termid":"PBO:0016892"}


id: GO:0035096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage-specific programmed cell death of cells of the larval midgut, during histolysis of the larval organ.","definition_xrefs":["GOC:bf","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"larval midgut histolysis","termid":"GO:0035069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval midgut cell programmed cell death","synonyms":[{"name":"larval midgut cell death","type":"exact"},{"name":"programmed cell death of larval midgut cells","type":"exact"}],"termid":"GO:0035096"}


id: GO:0061509
data:
  {"annotated_genes":["SJAG_00229","SJAG_03508","SJAG_02514","SJAG_04455","SJAG_01790","SJAG_06270"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74157,91207,96739,100404,102888,105455],"is_not":false,"summary":null,"term":"GO:0061509"}]},"cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained to the old mitotic spindle pole body resulting in its being distributed asymmetrically.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric protein localization to old or new spindle pole body","termid":"GO:0061492"},{"relation_name":"is_a","term_name":"protein localization to mitotic spindle pole body","termid":"GO:1902440"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_01790":null,"SJAG_02514":null,"SJAG_03508":null,"SJAG_04455":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"asymmetric protein localization to old mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0061509","terms_by_termid":{"GO:0061509":null}}


id: PBO:0078450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 3","termid":"PBO:0078450"}


id: PBO:0055436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2866","termid":"PBO:0055436"}


id: GO:0033028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.","definition_xrefs":["PMID:15330259","CL:0000763","GOC:add","GOC:mtg_apoptosis","PMID:11292031","PMID:17133093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell apoptotic process","synonyms":[{"name":"apoptosis of myeloid cells","type":"exact"},{"name":"myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033028"}


id: PBO:0041123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 6 pseudogene 1","termid":"PBO:0041123"}


id: PR:P87239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily A member 3, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ homolog 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.14","secondary_identifiers":["UniProtKB:P87239"],"synonyms":[{"name":"Spom972h-DNAJA3","type":"exact"}],"termid":"PR:P87239"}


id: GO:0140421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement into cell of externally available heme by receptor-mediated endocytosis.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic iron import into cell","termid":"GO:0140298"},{"relation_name":"is_a","term_name":"heme import into cell","termid":"GO:0140420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endocytic heme import into cell","synonyms":[{"name":"heme assimilation","type":"broad"}],"termid":"GO:0140421"}


id: GO:0035224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium).","definition_xrefs":["PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"genital disc pattern formation","termid":"GO:0035221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc anterior/posterior pattern formation","termid":"GO:0035224"}


id: PBO:0043436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 2","termid":"PBO:0043436"}


id: PBO:0030048
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric_iron_import","termid":"PBO:0030048"}


id: PBO:0045199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B9","termid":"PBO:0045199"}


id: GO:2000393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lamellipodium morphogenesis.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of lamellipodium organization","termid":"GO:1902744"},{"relation_name":"is_a","term_name":"regulation of lamellipodium morphogenesis","termid":"GO:2000392"},{"relation_name":"negatively_regulates","term_name":"lamellipodium morphogenesis","termid":"GO:0072673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellipodium morphogenesis","synonyms":[{"name":"negative regulation of lamellipodium organization","type":"related"}],"termid":"GO:2000393"}


id: GO:0097140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BIM-BCL-xl complex","termid":"GO:0097140"}


id: PBO:0070084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 41, pseudogene","termid":"PBO:0070084"}


id: PBO:0029551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_branched,_elongated_cell","termid":"PBO:0029551"}


id: PBO:0014281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box protein Hmo1","termid":"PBO:0014281"}


id: PBO:0063839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase type 2 alpha","termid":"PBO:0063839"}


id: PBO:0066881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 181","termid":"PBO:0066881"}


id: GO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:tb","GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glomerulus development","termid":"GO:0090192"}


id: FYPO:0001908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any unspliced or incompletely spliced mRNA precursor measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"increased pre-mRNA level","synonyms":[{"name":"accumulation of pre-mRNA transcripts","type":"related"},{"name":"increased pre-mRNA accumulation","type":"related"},{"name":"increased pre-mRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-mRNA level during vegetative growth","type":"exact"},{"name":"increased pre-mRNA transcript level","type":"exact"}],"termid":"FYPO:0001908"}


id: PATO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's affording unobstructed passage or view.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"closure","termid":"PATO:0000136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open","termid":"PATO:0000610"}


id: PATO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fatigability which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased strength","termid":"PATO:0001778"},{"relation_name":"is_a","term_name":"fatigability","termid":"PATO:0001815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fatigability","synonyms":[{"name":"high fatigability","type":"exact"}],"termid":"PATO:0001816"}


id: PBO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2","termid":"PBO:0075223"}


id: PBO:0074492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 3","termid":"PBO:0074492"}


id: PBO:0083781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0083781"}


id: PBO:0050450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U pseudogene 1","termid":"PBO:0050450"}


id: GO:0031099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a lost or destroyed body part, such as an organ or tissue. This process may occur via renewal, repair, and/or growth alone (i.e. increase in size or mass).","definition_xrefs":["GOC:pr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regeneration","secondary_identifiers":["Wikipedia:Regeneration_(biology)"],"termid":"GO:0031099"}


id: PBO:0029764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_double-strand_break_site","termid":"PBO:0029764"}


id: GO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001196)","termid":"GO:0001196"}


id: PBO:0087596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; green fluorescent protein (GFP)-fusion protein localizes to the endosome; YLR408C is not an essential gene","termid":"PBO:0087596"}


id: PBO:0050999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport associated protein","termid":"PBO:0050999"}


id: PBO:0069920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1212, pseudogene","termid":"PBO:0069920"}


id: PR:Q76PC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mti3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q76PC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.13","synonyms":[{"name":"Spom972h-mti3","type":"exact"}],"termid":"PR:Q76PC7"}


id: GO:1905294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["PMID:15073157","GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"positively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell differentiation","synonyms":[{"name":"activation of neural crest cell differentiation","type":"narrow"},{"name":"up regulation of neural crest cell differentiation","type":"exact"},{"name":"up-regulation of neural crest cell differentiation","type":"exact"},{"name":"upregulation of neural crest cell differentiation","type":"exact"}],"termid":"GO:1905294"}


id: GO:0033544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to cis-2-enoyl-CoA through one more cycle of the core beta-oxidation pathway. Cis-2-enoyl-CoA cannot be completely degraded via the core beta-oxidation pathway because hydratation of cis-2-enoyl-CoA yields D-3-hydroxyacyl-CoA, which is not a substrate for 3-hydroxylacyl-CoA dehydrogenase. Cis-2-enoyl-CoA must enter the so-called epimerase pathway, which involves converting D-3-hydroxyacyl-CoA to L-3-hydroxyacyl-CoA by 3-hydroxylacyl-CoA epimerase or by two stereo-specific enoyl-CoA hydratases. L-3-hydroxyacyl-CoA then returns to the core beta-oxidation pathway. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, epimerase pathway","termid":"GO:0033544"}


id: GO:0045659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte differentiation","termid":"GO:0030853"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"negatively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil differentiation","synonyms":[{"name":"down regulation of neutrophil differentiation","type":"exact"},{"name":"down-regulation of neutrophil differentiation","type":"exact"},{"name":"downregulation of neutrophil differentiation","type":"exact"},{"name":"inhibition of neutrophil differentiation","type":"narrow"}],"termid":"GO:0045659"}


id: PBO:0089072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex WD repeat subunit Gid7","termid":"PBO:0089072"}


id: PBO:0076350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT15 antisense RNA 1","termid":"PBO:0076350"}


id: FYPO:0000860
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[114463,114465],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[114464,114466],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[114355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[114513,114505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002678"},{"annotations":[114512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[114195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[114504,114508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[114449],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004205"},{"annotations":[114113],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[114451],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004982"},{"annotations":[114381,114379,114380],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001327"},{"annotations":[114501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002680"},{"annotations":[114498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"},{"annotations":[114450],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004574"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cellular metabolic process is abnormal. A metabolic process is any set of chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances.","definition_xrefs":["PomBase:mah","GO:0044237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"abnormal cellular 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type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"abnormal metabolic process","references_by_uniquename":{"PMID:23786411":null,"PMID:26774782":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_03940","SJAG_03689","SJAG_01787","SJAG_04697","SJAG_00610","SJAG_03575","SJAG_03351","SJAG_01956","SJAG_02796","SJAG_04551"],"single_locus_genotype_uniquenames":["nem2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","pck2delta","pck1delta","dcr1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","gms1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal metabolism","type":"exact"},{"name":"abnormal cellular metabolic process","type":"exact"}],"termid":"FYPO:0000860","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYPO:0001038":null,"FYPO:0001327":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004574":null,"FYPO:0004982":null,"FYPO:0005957":null,"FYPO:0007363":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0071872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an epinephrine stimulus. Epinephrine is a catecholamine that has the formula C9H13NO3; it is secreted by the adrenal medulla to act as a hormone, and released by certain neurons to act as a neurotransmitter active in the central nervous system.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to epinephrine","termid":"GO:0071871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to epinephrine stimulus","synonyms":[{"name":"cellular response to adrenaline stimulus","type":"exact"}],"termid":"GO:0071872"}


id: FYPO:0006790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which meiotic drive occurs to a lower extent than normal, or does not occur at all, despite the presence of a gene or allele that normally causes drive. Meiotic drive results in the unequal transmission of alleles, haplotypes, or chromosomes from a parental genome to such that are unequally represented (i.e. the \\\"driver\\\" is overrepresented) among the surviving products of meiosis.","definition_xrefs":["PMID:30475921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biological process","termid":"FYPO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"meiotic drive suppression","synonyms":[{"name":"decreased meiotic drive","type":"related"},{"name":"abolished meiotic drive","type":"related"},{"name":"suppression of meiotic drive","type":"exact"}],"termid":"FYPO:0006790"}


id: PR:O13879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.15c gene.","definition_xrefs":["UniProtKB:O13879","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1B3.15C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.15c","synonyms":[{"name":"Spom972h-SPAC1B3.15c","type":"exact"}],"termid":"PR:O13879"}


id: PBO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VII","termid":"PBO:0046800"}


id: GO:0000159
data:
  {"annotated_genes":["SJAG_00078","SJAG_00229","SJAG_03681","SJAG_00526","SJAG_00600","SJAG_01270","SJAG_03353"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71233,71673,75098,77198,95065,99899,111040],"is_not":false,"summary":null,"term":"GO:0000159"}]},"cv_name":"cellular_component","definition":"A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit.","definition_xrefs":["GOC:mah","ISBN:0198547684","PMID:17245430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_01270":null,"SJAG_03353":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase type 2A complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"PP2A complex","type":"exact"},{"name":"PP2A-pi","type":"narrow"},{"name":"PP2a-protector","type":"narrow"},{"name":"protein phosphatase 2 complex","type":"related"}],"termid":"GO:0000159","terms_by_termid":{"GO:0000159":null}}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0077126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulointerstitial nephritis antigen","termid":"PBO:0077126"}


id: SO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2B modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2B_acetylation_site","synonyms":[{"name":"H2Bac","type":"exact"},{"name":"histone 2B acetylation site","type":"exact"}],"termid":"SO:0002143"}


id: GO:0098035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging","termid":"GO:0019073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}


id: SO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that consists of at least three copies of the pentanucleotide NGAAN, bound by the heat shock transcription factor HSF.","definition_xrefs":["PMID:8689565","PMID:17347150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSE","synonyms":[{"name":"heat shock element","type":"exact"}],"termid":"SO:0001850"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:1905077","GO:0045379"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0085840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOR342C has a paralog, YAL037W, that arose from the whole genome duplication","termid":"PBO:0085840"}


id: PBO:0061361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 21","termid":"PBO:0061361"}


id: PBO:0042578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2D","termid":"PBO:0042578"}


id: PBO:0047209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 220 member C, pseudogene","termid":"PBO:0047209"}


id: PBO:0087332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting nexin for late-Golgi enzymes; required to maintain late-Golgi resident enzymes in their proper location by recycling molecules from the prevacuolar compartment; contains a PX domain and sequence similarity to human Snx3p","termid":"PBO:0087332"}


id: PBO:0085710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in splicing Group I aI5-beta intron from COX1 mRNA; mitochondrial matrix protein","termid":"PBO:0085710"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0068987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 231, pseudogene","termid":"PBO:0068987"}


id: PBO:0058295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4669","termid":"PBO:0058295"}


id: PBO:0073694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 6","termid":"PBO:0073694"}


id: GO:0102762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: eriodictyol + S-adenosyl-L-methionine = H+ + hesperetin(1-) + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"eriodictyol 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7754"],"termid":"GO:0102762"}


id: PBO:0062014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 3","termid":"PBO:0062014"}


id: GO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acetoacetic acid, a beta-keto acid of the keto acid group, empirical formula is C4H6O3 or CH3COCH2COOH.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"acetoacetic acid metabolic process","termid":"GO:0043438"},{"relation_name":"is_a","term_name":"ketone body catabolic process","termid":"GO:0046952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetoacetic acid catabolic process","synonyms":[{"name":"acetoacetic acid breakdown","type":"exact"},{"name":"acetoacetic acid catabolism","type":"exact"},{"name":"acetoacetic acid degradation","type":"exact"}],"termid":"GO:0043442"}


id: PBO:0044087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A7","termid":"PBO:0044087"}


id: PBO:0044888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPDC1 antisense RNA 1","termid":"PBO:0044888"}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: PR:G2TRU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.20","synonyms":[{"name":"Spom972h-SPCC18.20","type":"exact"}],"termid":"PR:G2TRU1"}


id: PBO:0060589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neighbor of BRCA1 lncRNA 2","termid":"PBO:0060589"}


id: PBO:0046067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 2","termid":"PBO:0046067"}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93704],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: GO:1903323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snoRNA metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016074"],"is_obsolete":false,"name":"regulation of snoRNA metabolic process","synonyms":[{"name":"regulation of snoRNA metabolism","type":"exact"}],"termid":"GO:1903323"}


id: GO:2000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"positively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte migration","synonyms":[{"name":"positive regulation of immature T cell migration","type":"related"},{"name":"positive regulation of immature T lymphocyte migration","type":"related"},{"name":"positive regulation of immature T-cell migration","type":"related"},{"name":"positive regulation of immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000412"}


id: PBO:0062588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily H member 3","termid":"PBO:0062588"}


id: PBO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AJ member 1","termid":"PBO:0061971"}


id: GO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type mitochondrial RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single subunit type RNA polymerase activity","termid":"GO:0001064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0140098","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"mitochondrial single subunit type RNA polymerase activity","termid":"GO:0001065"}


id: GO:1901152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vistamycin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00972","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"vistamycin metabolic process","termid":"GO:1901150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vistamycin biosynthetic process","synonyms":[{"name":"ribostamycin anabolism","type":"exact"},{"name":"ribostamycin biosynthesis","type":"exact"},{"name":"ribostamycin biosynthetic process","type":"exact"},{"name":"ribostamycin formation","type":"exact"},{"name":"ribostamycin synthesis","type":"exact"},{"name":"vistamycin anabolism","type":"exact"},{"name":"vistamycin biosynthesis","type":"exact"},{"name":"vistamycin formation","type":"exact"},{"name":"vistamycin synthesis","type":"exact"}],"termid":"GO:1901152"}


id: RO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"before_or_simultaneous_with","termid":"RO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simultaneous_with","termid":"RO:0002082"}


id: GO:0004661
data:
  {"annotated_genes":["SJAG_03029","SJAG_04923","SJAG_03810","SJAG_04434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71416,73573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[77581,96867,73476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.","definition_xrefs":["PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0018224","RHEA:21240"],"synonyms":[{"name":"protein-cysteine geranylgeranyltransferase activity","type":"exact"}],"termid":"GO:0004661","terms_by_termid":{"GO:0004662":null,"GO:0004663":null}}


id: PBO:0070139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 53 pseudogene","termid":"PBO:0070139"}


id: GO:0030047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Covalent modification of an actin molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actin modification","secondary_identifiers":["GO:0007013"],"termid":"GO:0030047"}


id: PBO:0027646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_BE49385A","termid":"PBO:0027646"}


id: PBO:0066359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 3","termid":"PBO:0066359"}


id: GO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of oligopeptide transport","termid":"GO:0090088"}


id: GO:1990649
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103624],"is_not":false,"summary":null,"term":"GO:1990649"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,2,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,2,4-trisphosphate + phosphate.","definition_xrefs":["GOC:al","PMID:15316017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-1,2,4,5-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990649","terms_by_termid":{"GO:1990649":null}}


id: PBO:0043681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORO7-PAM16 readthrough","termid":"PBO:0043681"}


id: GO:1901327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tacrolimus stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organonitrogen compound","termid":"GO:0010243"},{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tacrolimus","synonyms":[{"name":"response to FK506","type":"exact"},{"name":"response to tacrolimus hydrate","type":"exact"}],"termid":"GO:1901327"}


id: GO:0005217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellularly ligand-gated monoatomic ion channel activity","synonyms":[{"name":"intracellular ligand-gated ion channel activity","type":"broad"},{"name":"intracellular ligand-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0005217"}


id: PBO:0071619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 37","termid":"PBO:0071619"}


id: PBO:0038992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 1","termid":"PBO:0038992"}


id: PBO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR2","termid":"PBO:0012608"}


id: PBO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transporter","termid":"PBO:0000951"}


id: PBO:0040963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 34","termid":"PBO:0040963"}


id: MOD:00776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-aspartic acid by oxidative degradation.","definition_xrefs":["OMSSA:55","PubMed:9252331","Unimod:349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid residue","termid":"MOD:00013"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid (His)","synonyms":[{"name":"His->Asp","type":"related"},{"name":"his2asph","type":"exact"},{"name":"histidine oxidation to aspartic acid","type":"related"}],"termid":"MOD:00776"}


id: PBO:0086449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mannosyltransferase involved in protein glycosylation; member of the KRE2/MNT1 mannosyltransferase family; KTR7 has a paralog, KTR5, that arose from the whole genome duplication","termid":"PBO:0086449"}


id: PBO:0028498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ribosome_binding","termid":"PBO:0028498"}


id: GO:0018585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluorene + 2 H+ + 2 e- + O2 = H2O + 9-fluorenol.","definition_xrefs":["UM-BBD_reactionID:r0407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fluorene oxygenase activity","termid":"GO:0018585"}


id: PR:Q10238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic PUF family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.05","synonyms":[{"name":"Spom972h-mpf1","type":"exact"}],"termid":"PR:Q10238"}


id: PBO:0028516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028516"}


id: PBO:0038740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin maturation protease","termid":"PBO:0038740"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PBO:0068021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 326","termid":"PBO:0068021"}


id: PBO:0075663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, non-erythrocytic 4","termid":"PBO:0075663"}


id: GO:1990637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prolactin stimulus. The anterior pituitary hormone prolactin has a number of roles including being essential for lactation.","definition_xrefs":["PMID:7760850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prolactin","termid":"GO:1990637"}


id: GO:0031769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glucagon receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"glucagon receptor binding","synonyms":[{"name":"glucagon receptor ligand","type":"narrow"}],"termid":"GO:0031769"}


id: PBO:0041649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA2D3 antisense RNA 1","termid":"PBO:0041649"}


id: PBO:0089712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase Msf1","termid":"PBO:0089712"}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: GO:0031817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y8 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"P2Y8 nucleotide receptor binding","synonyms":[{"name":"P2Y8 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031817"}


id: GO:0004589
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + NAD+ = H+ + NADH + orotate.","definition_xrefs":["RHEA:13513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R01869","EC:1.3.1.14","MetaCyc:OROTATE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"(S)-dihydroorotate:NAD+ oxidoreductase activity","type":"related"},{"name":"orotate reductase (NADH) activity","type":"exact"}],"termid":"GO:0004589"}


id: PBO:0043812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 3","termid":"PBO:0043812"}


id: PBO:0005145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-methytransferase (predicted)","termid":"PBO:0005145"}


id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: GO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow.","definition_xrefs":["ISBN:0198547684","GOC:add","ISBN:068340007X","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"membrane attack complex","secondary_identifiers":["Wikipedia:Complement_membrane_attack_complex"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"TCC","type":"exact"},{"name":"membrane attack complex protein alphaM chain","type":"narrow"},{"name":"membrane attack complex protein beta2 chain","type":"narrow"},{"name":"terminal complement complex","type":"exact"}],"termid":"GO:0005579"}


id: PBO:0086657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some characteristics of a transcriptional activator; may be a target of Dbf2p-Mob1p kinase; GFP-fusion protein co-localizes with clathrin-coated vesicles; YML037C is not an essential gene","termid":"PBO:0086657"}


id: GO:1903727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:10657240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"positively_regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid metabolic process","synonyms":[{"name":"activation of phospholipid metabolic process","type":"narrow"},{"name":"activation of phospholipid metabolism","type":"narrow"},{"name":"positive regulation of phospholipid metabolism","type":"exact"},{"name":"up regulation of phospholipid metabolic process","type":"exact"},{"name":"up regulation of phospholipid metabolism","type":"exact"},{"name":"up-regulation of phospholipid metabolic process","type":"exact"},{"name":"up-regulation of phospholipid metabolism","type":"exact"},{"name":"upregulation of phospholipid metabolic process","type":"exact"},{"name":"upregulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903727"}


id: GO:0090132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up an epithelium undergo directed movement.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue migration","termid":"GO:0090130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelium migration","termid":"GO:0090132"}


id: PBO:0087823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (67 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087823"}


id: PR:Q96WW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh5 gene.","definition_xrefs":["UniProtKB:Q96WW1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.08c","synonyms":[{"name":"Spom972h-omh5","type":"exact"}],"termid":"PR:Q96WW1"}


id: GO:1905453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:27010503","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"}


id: GO:0140028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a transient pore in the plasma membrane and the attached contractile vacuolar membrane, to release water from the cell. This process does not involve fusion of the two membranes.","definition_xrefs":["Wikipedia:Exocytosis","PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"pore formation during contractile vacuole discharge","termid":"GO:0140028"}


id: GO:0033141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation of a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidyl-serine phosphorylation","termid":"GO:0033138"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation of STAT protein","termid":"GO:0033139"},{"relation_name":"positively_regulates","term_name":"serine phosphorylation of STAT protein","termid":"GO:0042501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-serine phosphorylation of STAT protein","secondary_identifiers":["GO:1903263"],"synonyms":[{"name":"activation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"positive regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"up regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"up-regulation of serine phosphorylation of STAT3 protein","type":"narrow"},{"name":"upregulation of serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0033141"}


id: GO:0070185
data:
  {"annotated_genes":["SJAG_02428"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93199],"is_not":false,"summary":null,"term":"GO:0070185"}]},"cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in a mitochondrion, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02428":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0006520","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"mitochondrial valyl-tRNA aminoacylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070185","terms_by_termid":{"GO:0070185":null}}


id: PBO:0041791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 4","termid":"PBO:0041791"}


id: PBO:0064462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase beta","termid":"PBO:0064462"}


id: GO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cob(I)alamin + hydrogen cyanide + NADP+ = cyanocob(III)alamin + H+ + NADPH.","definition_xrefs":["RHEA:16113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cyanocobalamin reductase (cyanide-eliminating) activity","secondary_identifiers":["MetaCyc:1.6.99.12-RXN","KEGG_REACTION:R02999","EC:1.16.1.6","Reactome:R-HSA-3149519"],"synonyms":[{"name":"NADPH2:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"NADPH:cyanocob(III)alamin oxidoreductase (cyanide-eliminating) activity","type":"related"},{"name":"cob(I)alamin, cyanide:NADP+ oxidoreductase activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH, cyanide-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase (NADPH; CN-eliminating) activity","type":"related"},{"name":"cyanocobalamin reductase activity","type":"related"}],"termid":"GO:0033787"}


id: MOD:00406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Applied Biosystems original isotope-coded affinity tag d0 reagent.","definition_xrefs":["Unimod:13#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems original ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Applied Biosystems original ICAT(TM) d0","type":"related"},{"name":"ICAT-D","type":"related"}],"termid":"MOD:00406"}


id: PBO:0041359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4BPA pseudogene 2","termid":"PBO:0041359"}


id: GO:1901897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["PMID:19708671","GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"}


id: GO:0033314
data:
  {"annotated_genes":["SJAG_01605","SJAG_02098","SJAG_03026","SJAG_02266","SJAG_00364","SJAG_01205","SJAG_03160","SJAG_04671","SJAG_02563","SJAG_04287","SJAG_03695","SJAG_01010","SJAG_03927","SJAG_02771","SJAG_01044","SJAG_01076","SJAG_02074"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71237,71971,74459,77711,78058,87070,89563,94694,94854,96003,101978,104621,107277,111204,111927,112212,112371],"is_not":false,"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0072443","GO:0072446","GO:0072459","GO:0031574"],"synonyms":[{"name":"S-M DNA replication checkpoint","type":"exact"},{"name":"S-M checkpoint","type":"exact"},{"name":"S-phase checkpoint","type":"broad"},{"name":"mitotic DNA replication checkpoint","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in S-M checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA replication checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0033314","terms_by_termid":{"GO:0033314":null}}


id: GO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal cysteine of proteins to form the derivative N-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid acetylation","termid":"GO:0006474"},{"relation_name":"is_a","term_name":"peptidyl-cysteine acetylation","termid":"GO:0018533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"N-terminal peptidyl-cysteine acetylation","secondary_identifiers":["GO:0017191"],"synonyms":[{"name":"peptidyl-cysteine N-acetylation","type":"exact"}],"termid":"GO:0018275"}


id: MOD:01386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 3-hydroxy-L-valine.","definition_xrefs":["RESID:AA0463","ChEBI:141793","PubMed:7328054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-L-valine","synonyms":[{"name":"(2S)-2-amino-3-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"3-hydroxy-L-valine","type":"exact"},{"name":"3-hydroxyvaline","type":"exact"},{"name":"3HyVal","type":"exact"},{"name":"MOD_RES 3-hydroxyvaline","type":"exact"}],"termid":"MOD:01386"}


id: GO:2000220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pseudohyphal growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"regulates","term_name":"pseudohyphal growth","termid":"GO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pseudohyphal growth","termid":"GO:2000220"}


id: PBO:0036467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3 (predicted)","termid":"PBO:0036467"}


id: GO:0006586
data:
  {"annotated_genes":["SJAG_01346","SJAG_02505","SJAG_03167","SJAG_01455","SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73233,109838,71310,78102,76218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01346":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indolalkylamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"indolalkylamine metabolism","type":"exact"},{"name":"indolamine metabolic process","type":"broad"},{"name":"indolamine metabolism","type":"broad"}],"termid":"GO:0006586","terms_by_termid":{"GO:0000162":null}}


id: PBO:0040997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 2","termid":"PBO:0040997"}


id: MOD:00835
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-oxoalanine.","definition_xrefs":["PubMed:14563551","PubMed:9478923","PubMed:9276974","PubMed:7628016","DeltaMass:349","PubMed:8681943","RESID:AA0185#SER","Unimod:401#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"L-3-oxoalanine","termid":"MOD:01169"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-oxoalanine (Ser)","synonyms":[{"name":"(S)-2-amino-3-oxopropanoic acid","type":"exact"},{"name":"2-amino-3-oxopropionic acid","type":"exact"},{"name":"C(alpha)-formylglycine","type":"related"},{"name":"Didehydro","type":"related"},{"name":"L-3-oxoalanine","type":"exact"},{"name":"L-amino-malonic acid semialdehyde","type":"exact"},{"name":"L-aminomalonaldehydic acid","type":"exact"},{"name":"L-serinesemialdehyde","type":"related"},{"name":"MOD_RES 3-oxoalanine (Ser)","type":"exact"},{"name":"dehydrogenated serine residue","type":"related"},{"name":"formylglycine","type":"related"},{"name":"formylglycine (from serine)","type":"exact"},{"name":"oxoalanine","type":"related"}],"termid":"MOD:00835"}


id: PBO:0069430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 695, pseudogene","termid":"PBO:0069430"}


id: FYPO:0003651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to nitrosative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to nitrosative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to nitrosative stress","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to nitrosative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to nitrosative stress","type":"exact"}],"termid":"FYPO:0003651"}


id: PBO:0074627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 23","termid":"PBO:0074627"}


id: PBO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_exchange_in_actomyosin_contractile_ring","termid":"PBO:0036064"}


id: PR:Q09847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup146 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup146 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.06c","synonyms":[{"name":"Spom972h-nup146","type":"exact"},{"name":"nuclear pore protein nup146 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09847"}


id: GO:0006687
data:
  {"annotated_genes":["SJAG_02168","SJAG_04878","SJAG_03953","SJAG_05311","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90818,74733,77971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[107762,87437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006675"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02168":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycosphingolipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"glycosphingolipid metabolism","type":"exact"}],"termid":"GO:0006687","terms_by_termid":{"GO:0006675":null,"GO:0051999":null}}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: PATO:0001229
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color saturation which is of high purity.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color saturation","termid":"PATO:0000017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high saturation","synonyms":[{"name":"bright ","type":"exact"},{"name":"vivid","type":"related"}],"termid":"PATO:0001229"}


id: FYPO:0009059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is increased.","definition_xrefs":["PMID:36749320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex during vegetative growth","termid":"FYPO:0000928"},{"relation_name":"is_a","term_name":"increased protein localization to cell periphery during vegetative growth","termid":"FYPO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to cell cortex during vegetative growth","synonyms":[{"name":"higher protein localization to cell cortex during vegetative growth","type":"exact"},{"name":"increased protein localisation to cell cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0009059"}


id: PBO:0042905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 2","termid":"PBO:0042905"}


id: PBO:0042634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 9 pseudogene","termid":"PBO:0042634"}


id: PR:Q9P7H6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf3 gene.","definition_xrefs":["UniProtKB:Q9P7H6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1782.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.03","synonyms":[{"name":"Spom972h-saf3","type":"exact"}],"termid":"PR:Q9P7H6"}


id: PBO:0076453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin","termid":"PBO:0076453"}


id: GO:0080071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indol-3-yl-methyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = indol-3-yl-methyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"desulfoglucosinolate sulfotransferase activity","termid":"GO:0047364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXN-1443"],"termid":"GO:0080071"}


id: PBO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob1","termid":"PBO:0004051"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GOC:bhm","PMID:18790874","GOC:TermGenie","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: PBO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity (predicted)","termid":"PBO:0012037"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: PBO:0089098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21","termid":"PBO:0089098"}


id: GO:0043319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated cytotoxicity","termid":"GO:0001916"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of cytotoxic T cell degranulation","termid":"GO:0043317"},{"relation_name":"positively_regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cytotoxic T cell degranulation","synonyms":[{"name":"activation of cytotoxic T cell degranulation","type":"narrow"},{"name":"positive regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"positive regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"},{"name":"stimulation of cytotoxic T cell degranulation","type":"narrow"},{"name":"up regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"up-regulation of cytotoxic T cell degranulation","type":"exact"},{"name":"upregulation of cytotoxic T cell degranulation","type":"exact"}],"termid":"GO:0043319"}


id: GO:0019864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgG isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"IgG binding","termid":"GO:0019864"}


id: PR:O94600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TELO2-interacting protein 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04677","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEL2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.13c","secondary_identifiers":["UniProtKB:O94600"],"synonyms":[{"name":"Spom972h-TTI1","type":"exact"}],"termid":"PR:O94600"}


id: PBO:0073391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 6, protein lysine methyltransferase","termid":"PBO:0073391"}


id: PBO:0040685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 3","termid":"PBO:0040685"}


id: FYPO:0007068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the probability that a DNA replication will initiate at a particular replication origin located in heterochromatin at subtelomeric regions is higher than in wild type. In cells with increased origin firing efficiency, genomic DNA replication initiates from more origins than wild type, and is completed in more, smaller segments, than wild type.","definition_xrefs":["PMID:18093330","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased origin firing efficiency","termid":"FYPO:0001249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased origin firing efficiency in subtelomeric heterochromatin","synonyms":[{"name":"increased origin firing efficiency at subtelomeric heterochromatin","type":"exact"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased origin firing efficiency in subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased origin firing efficiency in telomeric heterochromatin","type":"related"}],"termid":"FYPO:0007068"}


id: SO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains the code for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_attribute","termid":"SO:0000237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic","termid":"SO:0000880"}


id: PBO:0110261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex RNA-binding subunit Pcf11","termid":"PBO:0110261"}


id: PBO:0028730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_L-ergothioneine_level","termid":"PBO:0028730"}


id: FYPO:0005481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an diphosphoinositol-pentakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal diphosphoinositol-pentakisphosphate kinase activity","synonyms":[{"name":"normal PP-InsP5 kinase activity","type":"exact"}],"termid":"FYPO:0005481"}


id: FYPO:0007984
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) disassembly does not take place after cell division.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished eMTOC disassembly","termid":"FYPO:0007984"}


id: PBO:0038292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_id","termid":"PBO:0038292"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of nitrogen compound metabolic process","termid":"GO:0051173"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: PBO:0067179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 237, pseudogene","termid":"PBO:0067179"}


id: SO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 1 base long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translational_frameshift","synonyms":[{"name":"minus 1 ribosomal frameshift","type":"exact"},{"name":"minus 1 ribosomal slippage","type":"exact"},{"name":"minus 1 translational frameshift","type":"exact"}],"termid":"SO:0002329"}


id: PBO:0078970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 2-1","termid":"PBO:0078970"}


id: GO:0097735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A section of the Actinobacterium-type cell wall composed of (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate, diphthioceranate and other compounds.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Gram-positive-bacterium-type cell wall","termid":"GO:0009275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"DIM/DIP cell wall layer","termid":"GO:0097735"}


id: GO:0036050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a peptidyl-lysine residue by the addition of a succinyl group (CO-CH2-CH2-CO) to form N6-succinyl-L-lysine.","definition_xrefs":["GOC:sp","RESID:AA0545","GOC:jsg","PMID:21151122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein succinylation","termid":"GO:0018335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine succinylation","termid":"GO:0036050"}


id: PBO:0036378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga6 (predicted)","termid":"PBO:0036378"}


id: GO:0007598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the self-limited process linking exposure and activation of tissue factor to the activation of clotting factor X.","definition_xrefs":["GOC:add","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}


id: GO:0008657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ATP-hydrolyzing DNA topoisomerase. ATP-hydrolyzing DNA topoisomerase catalyzes the DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ATPase inhibitor activity","termid":"GO:0042030"},{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) regulator activity","termid":"GO:0072586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0140678","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity","synonyms":[{"name":"DNA gyrase inhibitor activity","type":"exact"}],"termid":"GO:0008657"}


id: PBO:0072601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 2","termid":"PBO:0072601"}


id: RO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"},{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_in","termid":"RO:0002624"}


id: GO:0008821
data:
  {"annotated_genes":["SJAG_03675","SJAG_01044","SJAG_05237","SJAG_04752","SJAG_02708","SJAG_00623"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59322,73878,76508,77346,77888,90316],"is_not":false,"summary":null,"term":"GO:0008821"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage at a junction such as a reciprocal single-stranded crossover between two homologous DNA duplexes (Holliday junction).","definition_xrefs":["EC:3.1.21.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_02708":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"crossover junction DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0008844","MetaCyc:3.1.22.4-RXN"],"synonyms":[{"name":"Hje endonuclease activity","type":"related"},{"name":"Holliday junction endonuclease CCE1 activity","type":"narrow"},{"name":"Holliday junction nuclease activity","type":"related"},{"name":"Holliday junction resolvase activity","type":"narrow"},{"name":"RusA endonuclease activity","type":"narrow"},{"name":"RuvC endonuclease activity","type":"narrow"},{"name":"SpCCe1 Holliday junction resolvase activity","type":"narrow"},{"name":"SpCCe1 holliday junction resolvase","type":"narrow"},{"name":"crossover junction endodeoxyribonuclease activity","type":"exact"},{"name":"crossover junction endoribonuclease activity","type":"exact"},{"name":"cruciform-cutting endonuclease activity","type":"related"},{"name":"endo X3","type":"related"},{"name":"endodeoxyribonuclease RUS activity","type":"exact"},{"name":"endonuclease RuvC activity","type":"narrow"},{"name":"endonuclease VII activity","type":"narrow"},{"name":"endonuclease X3 activity","type":"narrow"}],"termid":"GO:0008821","terms_by_termid":{"GO:0008821":null}}


id: PBO:0071222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 63","termid":"PBO:0071222"}


id: PBO:0085323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol-4-kinase; functions in Pkc1p protein kinase pathway; required for normal vacuole morphology, cell wall integrity, and actin cytoskeleton organization; required for autophagosome-vacuole fusion during autophagy and for lipophagy in stationary phase cells and during nitrogen starvation; localizes to plasma membrane and mitochondria in HTP studies","termid":"PBO:0085323"}


id: GO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of alternate transcripts of immunoglobulin genes through alternate splicing of exons.","definition_xrefs":["ISBN:0781735149","PMID:9185563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via alternate splicing","termid":"GO:0002563"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"alternate splicing of immunoglobulin genes","synonyms":[{"name":"alternate splicing of antibody genes","type":"exact"}],"termid":"GO:0002564"}


id: PBO:0044991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExH-box helicase 58","termid":"PBO:0044991"}


id: GO:0140142
data:
  {"annotated_genes":["SJAG_03693","SJAG_03470","SJAG_01358","SJAG_00586","SJAG_03959","SJAG_01083","SJAG_04366","SJAG_00840","SJAG_04411","SJAG_01909","SJAG_01534","SJAG_01789","SJAG_02998","SJAG_02425","SJAG_00968","SJAG_02661","SJAG_03662"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112360,86741,71631,92059,108739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005049"},{"annotations":[76691,89005,72661,92060,73346,89064,73333,75441,109647,72525,97981,71136,74405,112361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061608"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a cargo between the nucleus and the cytoplasm by moving along with the cargo. The cargo can be either a RNA or a protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01083":null,"SJAG_01358":null,"SJAG_01534":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_02425":null,"SJAG_02661":null,"SJAG_02998":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04411":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nucleocytoplasmic carrier activity","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0061717","GO:0090631"],"synonyms":[{"name":"miRNA transporter activity","type":"narrow"},{"name":"nucleocytoplasmic importin/exportin activity","type":"exact"},{"name":"pre-miRNA transporter activity","type":"narrow"}],"termid":"GO:0140142","terms_by_termid":{"GO:0005049":null,"GO:0061608":null}}


id: GO:1904482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrahydrofolate stimulus.","definition_xrefs":["GOC:BHF","GOC:hal","GOC:TermGenie","GO_REF:0000071","PMID:24698160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organonitrogen compound","termid":"GO:0071417"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to tetrahydrofolate","termid":"GO:1904481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tetrahydrofolate","termid":"GO:1904482"}


id: GO:0042069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catecholamines.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine metabolic process","synonyms":[{"name":"regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0042069"}


id: GO:0106078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + histone = CoA + succinyl-histone.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone succinyltransferase activity","termid":"GO:0106078"}


id: PBO:0076399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF1A antisense RNA 1","termid":"PBO:0076399"}


id: PBO:0061217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 8 pseudogene 1","termid":"PBO:0061217"}


id: PBO:0042672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 6","termid":"PBO:0042672"}


id: PR:Q9UTL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPN-loop GTPase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21231:SF3","OMA:SCHPO01930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.07c","secondary_identifiers":["UniProtKB:Q9UTL7"],"synonyms":[{"name":"ATP-binding domain 1 family member B homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPN2","type":"exact"}],"termid":"PR:Q9UTL7"}


id: PBO:0051627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILRUN pseudogene 1","termid":"PBO:0051627"}


id: GO:1905161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","GOC:bf","GOC:PARL","PMID:23303671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to phagocytic vesicle","synonyms":[{"name":"protein localisation in phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagocytic vesicle","type":"exact"},{"name":"protein localisation to phagosome","type":"exact"},{"name":"protein localization in phagocytic vesicle","type":"exact"},{"name":"protein recruitment to phagosome","type":"exact"}],"termid":"GO:1905161"}


id: GO:0097058
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.","definition_xrefs":["GOC:BHF","PMID:10966616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"CRLF-CLCF1 complex","synonyms":[{"name":"CLF-CLC complex","type":"narrow"}],"termid":"GO:0097058"}


id: GO:1902555
data:
  {"annotated_genes":["SJAG_04907","SJAG_03796","SJAG_03952","SJAG_04062","SJAG_01551","SJAG_01056","SJAG_03234","SJAG_01260","SJAG_02553","SJAG_06613","SJAG_00306","SJAG_03328","SJAG_00754","SJAG_03789","SJAG_04252","SJAG_02275","SJAG_01581","SJAG_04916","SJAG_01623","SJAG_02374","SJAG_01369","SJAG_03425","SJAG_00955","SJAG_04582","SJAG_02547"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90526,87330,99521,113599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[113634,99948,108690,97490,71498,110455,86742,100158,94973,71367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[73282,110537,71263,75309,108693,110457,101020,92337,86743,100160,101021,71497,113635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[84513,109754,112283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[77692,71574,73570,101289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endoribonuclease activity.","definition_xrefs":["PMID:18191223","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endoribonuclease complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"Ire1 complex dimer","type":"related"},{"name":"Ire1 complex homodimer","type":"related"},{"name":"Ire1 complex homooligomer","type":"related"}],"termid":"GO:1902555","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0090730":null,"GO:0120330":null}}


id: PBO:0049096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 153","termid":"PBO:0049096"}


id: GO:0048491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the presynapse to the cell body.","definition_xrefs":["GOC:lmg","PMID:24762653","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"retrograde synaptic vesicle transport","synonyms":[{"name":"retrograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048491"}


id: PBO:0030841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenine_import","termid":"PBO:0030841"}


id: PR:P78954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif45 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.15","synonyms":[{"name":"Spom972h-tif45","type":"exact"},{"name":"eIF-4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4F 25 kDa subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF4E-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mRNA cap-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78954"}


id: PBO:0005690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex28/29 (predicted)","termid":"PBO:0005690"}


id: PBO:0062194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 3 pseudogene","termid":"PBO:0062194"}


id: FYPO:0002027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is not perpendicular to the long axis of the cell.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"angled actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring not orthogonal to long axis of cell","type":"exact"},{"name":"actomyosin contractile ring not perpendicular to long axis of cell","type":"related"},{"name":"angled actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"angled actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"angled cytokinetic contractile ring","type":"exact"},{"name":"angled mitotic contractile ring","type":"exact"},{"name":"tilted actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002027"}


id: GO:0016281
data:
  {"annotated_genes":["SJAG_00507","SJAG_01954","SJAG_03223","SJAG_04772"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72405,73708,74189,83284],"is_not":false,"summary":null,"term":"GO:0016281"}]},"cv_name":"cellular_component","definition":"The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome.","definition_xrefs":["GOC:hb","PMID:32883864","PMID:8449919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01954":null,"SJAG_03223":null,"SJAG_04772":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 4F complex","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"cytoplasmic cap-binding complex","type":"exact"},{"name":"eIF-4F","type":"exact"},{"name":"eukaryotic translation initiation factor 4 complex","type":"broad"}],"termid":"GO:0016281","terms_by_termid":{"GO:0016281":null}}


id: PBO:0028662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_slippage_during_replication_fork_processing","termid":"PBO:0028662"}


id: GO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"positive regulation of muscle organ development","termid":"GO:0048636"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extraocular skeletal muscle development","termid":"GO:0014727"}


id: PBO:0051902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGA9 antisense RNA 1","termid":"PBO:0051902"}


id: PBO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin","termid":"PBO:0002813"}


id: GO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"integrin biosynthetic process","termid":"GO:0045112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin biosynthetic process","synonyms":[{"name":"down regulation of integrin biosynthetic process","type":"exact"},{"name":"down-regulation of integrin biosynthetic process","type":"exact"},{"name":"downregulation of integrin biosynthetic process","type":"exact"},{"name":"inhibition of integrin biosynthetic process","type":"narrow"},{"name":"negative regulation of integrin anabolism","type":"exact"},{"name":"negative regulation of integrin biosynthesis","type":"exact"},{"name":"negative regulation of integrin formation","type":"exact"},{"name":"negative regulation of integrin synthesis","type":"exact"}],"termid":"GO:0045720"}


id: PBO:0003339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NASP family CENP-A chaperone","termid":"PBO:0003339"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["EC:2.4.1.186","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7667","RHEA:56560"],"termid":"GO:0102751"}


id: PBO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_myxothiazol","termid":"PBO:0035942"}


id: PBO:0051273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 4","termid":"PBO:0051273"}


id: GO:1900898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane biosynthetic process","termid":"GO:1900896"},{"relation_name":"is_a","term_name":"positive regulation of heptadecane metabolic process","termid":"GO:1900901"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptadecane biosynthetic process","synonyms":[{"name":"activation of heptadecane anabolism","type":"narrow"},{"name":"activation of heptadecane biosynthesis","type":"narrow"},{"name":"activation of heptadecane biosynthetic process","type":"narrow"},{"name":"activation of heptadecane formation","type":"narrow"},{"name":"activation of heptadecane synthesis","type":"narrow"},{"name":"positive regulation of heptadecane anabolism","type":"related"},{"name":"positive regulation of heptadecane biosynthesis","type":"related"},{"name":"positive regulation of heptadecane formation","type":"related"},{"name":"positive regulation of heptadecane synthesis","type":"related"},{"name":"up regulation of heptadecane anabolism","type":"related"},{"name":"up regulation of heptadecane biosynthesis","type":"related"},{"name":"up regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up regulation of heptadecane formation","type":"related"},{"name":"up regulation of heptadecane synthesis","type":"related"},{"name":"up-regulation of heptadecane anabolism","type":"related"},{"name":"up-regulation of heptadecane biosynthesis","type":"related"},{"name":"up-regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up-regulation of heptadecane formation","type":"related"},{"name":"up-regulation of heptadecane synthesis","type":"related"},{"name":"upregulation of heptadecane anabolism","type":"related"},{"name":"upregulation of heptadecane biosynthesis","type":"related"},{"name":"upregulation of heptadecane biosynthetic process","type":"exact"},{"name":"upregulation of heptadecane formation","type":"related"},{"name":"upregulation of heptadecane synthesis","type":"related"}],"termid":"GO:1900898"}


id: GO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Plays a role in regulating transcription initiation.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription initiation factor activity (obsolete GO:0016986)","synonyms":[{"name":"transcription initiation factor activity","type":"exact"},{"name":"transcriptional initiation factor activity","type":"exact"}],"termid":"GO:0016986"}


id: FYPO:0007638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the anisotropic movement of chromatin occurs to a lower extent than normal during mitosis. Normally, chromatin moves to a lesser extent, and with less freedom of movement direction (i.e. more anisotropically), during mitosis than during interphase.","definition_xrefs":["PMID:33434270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin mobility","termid":"FYPO:0007637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased anisotropic motion of mitotic chromatin","synonyms":[{"name":"decreased anisotropic chromatin motion during mitosis","type":"exact"},{"name":"decreased anisotropic chromatin motion during mitotic M phase","type":"related"},{"name":"decreased anisotropic chromatin movement during mitosis","type":"exact"},{"name":"decreased anisotropic mitotic chromatin mobility","type":"exact"},{"name":"decreased anisotropic mitotic chromatin motion","type":"exact"},{"name":"decreased anisotropic motion of mitotic chromatin during vegetative growth","type":"exact"},{"name":"decreased anisotropic movement of mitotic chromatin","type":"exact"},{"name":"reduced anisotropic motion of mitotic chromatin","type":"exact"}],"termid":"FYPO:0007638"}


id: GO:0009487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A small disulfide-containing redox protein that serves as a glutathione-disulfide oxidoreductase.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete glutaredoxin (obsolete GO:0009487)","synonyms":[{"name":"glutaredoxin","type":"exact"}],"termid":"GO:0009487"}


id: GO:0005816
data:
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id: GO:1905517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a macrophage from one site to another.","definition_xrefs":["GOC:TermGenie","GO_REF:0000091","PMID:25749876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage migration","termid":"GO:1905517"}


id: GO:0071565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that is found in post-mitotic neurons, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, DPF1/BAF45B, DPF3/BAF45C, ACTL6B/BAF53B genes. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.","definition_xrefs":["GOC:ss","PMID:17640523","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nBAF complex","termid":"GO:0071565"}


id: PBO:0079810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glycosyltransferase family 3 member A2","termid":"PBO:0079810"}


id: GO:0007124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells grow as a chain of physically attached, elongated cells in response to an environmental stimulus or stimuli.","definition_xrefs":["PMID:19347739","PMID:24710476","GOC:krc","PMID:11104818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudohyphal growth","termid":"GO:0007124"}


id: PBO:0043102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 14","termid":"PBO:0043102"}


id: PBO:0089678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex 3'-5'-exoribonuclease subunit 6","termid":"PBO:0089678"}


id: PBO:0050968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 2","termid":"PBO:0050968"}


id: PBO:0053737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 960","termid":"PBO:0053737"}


id: SO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA transposable element defined as having termini with perfect, or nearly perfect short inverted repeats, generally 10 - 40 nucleotides long.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_inverted_repeat_element","synonyms":[{"name":"TIR element","type":"exact"},{"name":"terminal inverted repeat element","type":"exact"}],"termid":"SO:0000208"}


id: FYPO:0005655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is normal (i.e. indistinguishable from wild type). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah","PMID:25806539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"normal iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"normal level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005655"}


id: FYPO:0007466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation","synonyms":[{"name":"abnormal histone H3 K9 methylation","type":"exact"},{"name":"abnormal histone H3K9me","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation","type":"exact"}],"termid":"FYPO:0007466"}


id: PATO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000154 pain threshold (obsolete PATO:0000154)","termid":"PATO:0000154"}


id: GO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones, neuropeptides and renin from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 1 activity (obsolete GO:0004285)","synonyms":[{"name":"prohormone convertase 3","type":"related"},{"name":"NEC 1 activity","type":"narrow"},{"name":"PC1 activity","type":"narrow"},{"name":"neuroendocrine convertase 1 activity","type":"narrow"},{"name":"prohormone convertase I activity","type":"narrow"},{"name":"proprotein convertase 1 activity","type":"exact"}],"termid":"GO:0004285"}


id: PBO:0088868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein P2","termid":"PBO:0088868"}


id: PBO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 32","termid":"PBO:0070661"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005654","GO:0032991"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: PBO:0090887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic serine-tRNA ligase Srs1","termid":"PBO:0090887"}


id: PBO:0042589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 2","termid":"PBO:0042589"}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: PBO:0053887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1167","termid":"PBO:0053887"}


id: FYPO:0007526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to salt stress.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"increased protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0007526"}


id: PBO:0084793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for respiratory growth under some conditions and for stability of the mitochondrial genome; subunit of a complex containing Mrx6p, Pim1p, and Mam33p that may regulate mtDNA replication","termid":"PBO:0084793"}


id: PBO:0066325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 intronic transcript 1","termid":"PBO:0066325"}


id: GO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiosulfate + 2 glutathione = sulfite + glutathione disulfide + sulfide.","definition_xrefs":["MetaCyc:THIOSULFATE--THIOL-SULFURTRANSFERASE-RXN","EC:2.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"thiosulfate-thiol sulfurtransferase activity","secondary_identifiers":["RHEA:14505","Reactome:R-HSA-1655879"],"synonyms":[{"name":"glutathione-dependent thiosulfate reductase activity","type":"related"},{"name":"sulfane reductase activity","type":"related"},{"name":"sulfane sulfurtransferase activity","type":"related"},{"name":"thiosulfate:thiol sulfurtransferase activity","type":"related"},{"name":"thiosulphate-thiol sulphurtransferase activity","type":"exact"}],"termid":"GO:0050337"}


id: FYPO:0005128
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PMID:17927811","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of middle meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of middle meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of middle meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005128"}


id: PR:Q09672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-methyl-2-oxobutanoate hydroxymethyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00057","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.09c","secondary_identifiers":["UniProtKB:Q09672"],"synonyms":[{"name":"Spom972h-panB","type":"exact"},{"name":"ketopantoate hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09672"}


id: PBO:0070367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 5","termid":"PBO:0070367"}


id: PBO:0046657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESF1 nucleolar pre-rRNA processing protein homolog","termid":"PBO:0046657"}


id: PBO:0039988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 6 interacting protein 1 pseudogene 2","termid":"PBO:0039988"}


id: PBO:0079685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitination factor E4B","termid":"PBO:0079685"}


id: GO:0035696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a monocyte from the blood vessels into the surrounding tissue.","definition_xrefs":["PMID:10657654","GOC:BHF","CL:0000576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular extravasation","termid":"GO:0045123"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte extravasation","termid":"GO:0035696"}


id: GO:1901274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00856","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthetic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid anabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid biosynthesis","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid formation","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid synthesis","type":"exact"}],"termid":"GO:1901274"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: PBO:0072970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 2","termid":"PBO:0072970"}


id: PBO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_mitotic_DNA_replication_fork_barriers","termid":"PBO:0031263"}


id: PBO:0027622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_linear_element_morphology","termid":"PBO:0027622"}


id: GO:1904315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any transmitter-gated ion channel activity that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:TermGenie","GO_REF:0000061","PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0038023","GO:0005215"],"is_obsolete":false,"name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ionotropic neurotransmitter receptor activity involved in regulation of post-synaptic membrane potential","type":"narrow"},{"name":"ionotropic neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"narrow"},{"name":"transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential","type":"broad"}],"termid":"GO:1904315"}


id: GO:2000620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H4-K16 acetylation (obsolete GO:2000620)","synonyms":[{"name":"positive regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000620"}


id: PBO:0034794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0034794"}


id: GO:0070048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains endobrevin (VAMP8), SNAP-25, and syntaxin 1a (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endobrevin-SNAP-25-syntaxin-1a complex","synonyms":[{"name":"SNARE complex (Stx1a, Snap25, Vamp8)","type":"narrow"},{"name":"Stx1a-Snap25-Vamp8 complex","type":"narrow"}],"termid":"GO:0070048"}


id: GO:0120108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110822],"is_not":false,"summary":null,"term":"GO:0120108"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (DNA)-3'-diphospho-5'-guanosine + H2O = (DNA)-3'-phosphate + GMP.","definition_xrefs":["PMID:26007660","RHEA:52140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA-3'-diphospho-5'-guanosine diphosphatase","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.1.72"],"synonyms":[{"name":"DNA-3'pp5'G guanylate hydrolase","type":"exact"}],"termid":"GO:0120108","terms_by_termid":{"GO:0120108":null}}


id: PBO:0005282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 4","termid":"PBO:0005282"}


id: GO:0033624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"negatively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of integrin activation","synonyms":[{"name":"negative regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033624"}


id: GO:0046070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dGTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGTP metabolic process","synonyms":[{"name":"dGTP metabolism","type":"exact"}],"termid":"GO:0046070"}


id: PBO:0051455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 6-57","termid":"PBO:0051455"}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: PBO:0051748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 14","termid":"PBO:0051748"}


id: GO:0019379
data:
  {"annotated_genes":["SJAG_04060","SJAG_03475","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76850,78508,95480],"is_not":false,"summary":null,"term":"GO:0019379"}]},"cv_name":"biological_process","definition":"The pathway by which inorganic sulfate is processed and incorporated into sulfated compounds, where the phosphoadenylyl sulfate reduction step is catalyzed by the enzyme phosphoadenylyl-sulfate reductase (thioredoxin) (EC:1.8.4.8).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03475":null,"SJAG_04060":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["MetaCyc:SO4ASSIM-PWY"],"synonyms":[{"name":"sulphate assimilation, phosphoadenylyl sulphate reduction by a phosphoadenylyl-sulphate reductase (thioredoxin)","type":"exact"}],"termid":"GO:0019379","terms_by_termid":{"GO:0019379":null}}


id: MOD:00858
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to D-alanine.","definition_xrefs":["PubMed:7961627","RESID:AA0191#SER"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-alanine","termid":"MOD:00862"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"deoxygenated residue","termid":"MOD:01161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-alanine (Ser)","synonyms":[{"name":"(R)-2-aminopropanoic acid","type":"exact"},{"name":"D-Ala(Ser)","type":"exact"},{"name":"D-alanine","type":"exact"},{"name":"MOD_RES D-alanine (Ser)","type":"exact"}],"termid":"MOD:00858"}


id: PBO:0053279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B5","termid":"PBO:0053279"}


id: PBO:0028491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_midzone_assembly","termid":"PBO:0028491"}


id: PBO:0073410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 14","termid":"PBO:0073410"}


id: PR:Q9UTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtilase-type proteinase psp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.01","synonyms":[{"name":"Spom972h-psp3","type":"exact"}],"termid":"PR:Q9UTS0"}


id: PBO:0056316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K2 divergent transcript","termid":"PBO:0056316"}


id: PBO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IB","termid":"PBO:0061547"}


id: PBO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-16","termid":"PBO:0075053"}


id: PBO:0063785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 10 pseudogene 1","termid":"PBO:0063785"}


id: PBO:0055869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 1","termid":"PBO:0055869"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: PBO:0089982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, meiosis specific","termid":"PBO:0089982"}


id: PBO:0030231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_increase_in_steady-state_intracellular_calcium_level_following_extracellular_calcium_stimulus_(obsolete_FYPO:0001467)","termid":"PBO:0030231"}


id: GO:0102662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxopropanoate + coenzyme A(4-) + NAD(1-) = acetyl-CoA(4-) + carbon dioxide + NADH(2-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity (obsolete GO:0102662)","termid":"GO:0102662"}


id: FYPO:0006460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal in regions containing protein-coding genes during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at protein coding gene during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at protein coding gene during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at protein-coding gene during meiosis I","type":"exact"}],"termid":"FYPO:0006460"}


id: PBO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ serine hydrolase family fusion protein Dfr1","termid":"PBO:0013479"}


id: PBO:0004746
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNL3L","termid":"PBO:0004746"}


id: GO:1904714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:PARL","PMID:20176123","GOC:TermGenie","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0030163","GO:0006914"],"is_obsolete":false,"name":"regulation of chaperone-mediated autophagy","synonyms":[{"name":"regulation of CMA","type":"related"}],"termid":"GO:1904714"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: PBO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformed_into","termid":"PBO:0017417"}


id: GO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD(P)+ = an 11-oxosteroid + NAD(P)H + H+.","definition_xrefs":["PMID:15761036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity","secondary_identifiers":["Reactome:R-HSA-194023","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"synonyms":[{"name":"11beta-hydroxy steroid dehydrogenase","type":"related"},{"name":"11beta-hydroxysteroid dehydrogenase","type":"related"},{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-reductase","type":"related"},{"name":"corticosteroid 11beta-dehydrogenase","type":"related"}],"termid":"GO:0003845"}


id: FYPO:0009074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing serine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth on serine nitrogen source","synonyms":[{"name":"increased growth on serine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on serine nitrogen source","type":"exact"}],"termid":"FYPO:0009074"}


id: PBO:0078615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64F, pseudogene","termid":"PBO:0078615"}


id: PBO:0073414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 20","termid":"PBO:0073414"}


id: GO:0021908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:dph","PMID:11262869","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway involved in spinal cord anterior/posterior pattern formation","synonyms":[{"name":"retinoic acid receptor signalling pathway in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021908"}


id: PBO:0108562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1 And Mei2-associated RNA","termid":"PBO:0108562"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: GO:0001877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with lipoarabinomannan and transmitting the signal to initiate an innate immune response.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lipoarabinomannan immune receptor activity","synonyms":[{"name":"LAM receptor activity","type":"exact"},{"name":"lipoarabinomannan receptor activity","type":"broad"}],"termid":"GO:0001877"}


id: PBO:0058436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5000","termid":"PBO:0058436"}


id: GO:1905200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gibberellic acid across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:27139299","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"gibberellic acid transmembrane transport","termid":"GO:1905200"}


id: PBO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A beta","termid":"PBO:0002337"}


id: GO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the proboscis over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proboscis development","secondary_identifiers":["GO:0016349"],"termid":"GO:0048728"}


id: PBO:0044580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBI pseudogene 2","termid":"PBO:0044580"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: GO:0034607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sharp ventral turn performed by the male as he approaches either the hermaphrodite head or tail, whilst trying to locate his partner's vulva. Turning occurs via a sharp ventral coil of the male's tail.","definition_xrefs":["PMID:18050467","WB_REF:WBPaper00002109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"turning behavior involved in mating","synonyms":[{"name":"turning behavior during mating","type":"exact"}],"termid":"GO:0034607"}


id: PBO:0053855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1124","termid":"PBO:0053855"}


id: PBO:0064848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B","termid":"PBO:0064848"}


id: PBO:0045745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous Bornavirus like nucleoprotein 2","termid":"PBO:0045745"}


id: PBO:0081702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 623","termid":"PBO:0081702"}


id: GO:0018467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + H2O + NAD+ = formate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.46","RHEA:16425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formaldehyde dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00604","UM-BBD_reactionID:r0240","MetaCyc:FORMALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"formaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"glutathione-independent formaldehyde dehydrogenase activity","type":"exact"}],"termid":"GO:0018467"}


id: PBO:0048916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member K","termid":"PBO:0048916"}


id: GO:0052096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a syncytium, a multi-nucleate and physiologically active aggregation of fused root cells induced by a symbiotic nematode in a plant host. The syncytium exclusively provides the nematode with nourishment during its sedentary life, for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of syncytium involving giant cell for nutrient acquisition","synonyms":[{"name":"formation by organism of syncytium involving giant cell for nutrient acquisition from host","type":"exact"},{"name":"formation by symbiont of syncytium involving giant cell for nutrient acquisition from host","type":"related"}],"termid":"GO:0052096"}


id: PBO:0052849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-5","termid":"PBO:0052849"}


id: PBO:0059764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 38","termid":"PBO:0059764"}


id: PBO:0065771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI interacting lncRNA","termid":"PBO:0065771"}


id: GO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"gamma-delta intraepithelial T cell development","type":"related"},{"name":"gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002304"}


id: PBO:0067555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 706, pseudogene","termid":"PBO:0067555"}


id: GO:1990502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to transform a dense core granule generated at the trans-Golgi network into a fully formed and transmissible dense core granule. Dense core granule maturation proceeds through clathrin-mediated membrane remodeling events and is essential for efficient processing of cargo within dense core granules as well as for removing factors that might otherwise interfere with dense core granule trafficking and exocytosis.","definition_xrefs":["GOC:kmv","PMID:22654674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule maturation","termid":"GO:0061792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dense core granule maturation","synonyms":[{"name":"dense core vesicle maturation","type":"exact"}],"termid":"GO:1990502"}


id: PBO:0063055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) specific ribonuclease subunit PAN2","termid":"PBO:0063055"}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: PBO:0000756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C2HC5 type","termid":"PBO:0000756"}


id: FYPO:0005048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at RNA polymerase II promoters is increased.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at RNA polymerase II promoter during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin at RNA polymerase II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA pol II promoter during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at RNA polymerase II promoter during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005048"}


id: PBO:0068092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 399","termid":"PBO:0068092"}


id: GO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plant organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of plant organ formation","termid":"GO:0090709"}


id: PBO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine aminotransferease subunit (predicted)","termid":"PBO:0000686"}


id: PBO:0060493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylneuraminic acid phosphatase","termid":"PBO:0060493"}


id: GO:0005143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-12 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-12 receptor binding","synonyms":[{"name":"IL-12","type":"narrow"},{"name":"interleukin-12 receptor ligand","type":"narrow"}],"termid":"GO:0005143"}


id: GO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of UTP:glucose-1-phosphate uridylyltransferase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"UTP:glucose-1-phosphate uridylyltransferase regulator activity","synonyms":[{"name":"UDP-glucose diphosphorylase regulator activity","type":"exact"},{"name":"UDP-glucose pyrophosphorylase regulator activity","type":"exact"},{"name":"glucose-1-phosphate uridylyltransferase regulator activity","type":"exact"}],"termid":"GO:0043763"}


id: PBO:0056761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15","termid":"PBO:0056761"}


id: PBO:0004866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase (predicted)","termid":"PBO:0004866"}


id: PBO:0109167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein Hpz1, implicated in DNA repair","termid":"PBO:0109167"}


id: PBO:0081562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 486","termid":"PBO:0081562"}


id: GO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mast cell cytokine production","termid":"GO:0032762"}


id: PATO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: GO:0009998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"},{"relation_name":"is_a","term_name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate specification","synonyms":[{"name":"down regulation of retinal cone cell fate specification","type":"exact"},{"name":"down-regulation of retinal cone cell fate specification","type":"exact"},{"name":"downregulation of retinal cone cell fate specification","type":"exact"},{"name":"inhibition of retinal cone cell fate specification","type":"narrow"},{"name":"negative regulation of retina cone cell fate specification","type":"exact"},{"name":"suppression of retina cone cell fate","type":"exact"},{"name":"suppression of retinal cone cell fate","type":"exact"}],"termid":"GO:0009998"}


id: GO:0016441
data:
  {"annotated_genes":["SJAG_03689","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114467,114468],"is_not":false,"summary":null,"term":"GO:0016441"}]},"cv_name":"biological_process","definition":"The inactivation of gene expression that occurs after transcription.","definition_xrefs":["PMID:15020054","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-transcriptional regulation of gene expression","termid":"GO:0010608"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"post-transcriptional gene silencing","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["Wikipedia:Post_transcriptional_gene_silencing"],"synonyms":[{"name":"PTGS","type":"exact"},{"name":"posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0016441","terms_by_termid":{"GO:0016441":null}}


id: PBO:0063873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C pseudogene 2","termid":"PBO:0063873"}


id: GO:0043395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heparan sulfate proteoglycan, any proteoglycan containing heparan sulfate as the glycosaminoglycan carbohydrate unit.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"heparan sulfate proteoglycan binding","synonyms":[{"name":"heparin proteoglycan binding","type":"related"}],"termid":"GO:0043395"}


id: PBO:0030280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0030280"}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: GO:0047208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + UDP-D-glucose = daphnin + H+ + UDP.","definition_xrefs":["EC:2.4.1.104","RHEA:14325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"o-dihydroxycoumarin 7-O-glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.104-RXN","KEGG_REACTION:R03548"],"synonyms":[{"name":"UDP-glucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:o-dihydroxycoumarin glucosyltransferase activity","type":"related"},{"name":"UDPglucose:7,8-dihydroxycoumarin 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-o-dihydroxycoumarin 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047208"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: GO:0015888
data:
  {"annotated_genes":["SJAG_00835","SJAG_02962","SJAG_04673","SJAG_03652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[85839,85838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thiamine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transport","type":"exact"},{"name":"vitamin B1 transport","type":"exact"}],"termid":"GO:0015888","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: PBO:0060253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 3","termid":"PBO:0060253"}


id: PBO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, E","termid":"PBO:0050042"}


id: GO:0034269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin catabolic process","termid":"GO:0009823"},{"relation_name":"is_a","term_name":"discadenine metabolic process","termid":"GO:0034267"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"discadenine catabolic process","synonyms":[{"name":"discadenine breakdown","type":"exact"},{"name":"discadenine catabolism","type":"exact"},{"name":"discadenine degradation","type":"exact"}],"termid":"GO:0034269"}


id: PBO:0004622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp4 (predicted)","termid":"PBO:0004622"}


id: PBO:0061712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 7","termid":"PBO:0061712"}


id: GO:2000689
data:
  {"annotated_genes":["SJAG_02864","SJAG_04621","SJAG_00938","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85043,93807,93558,103470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[76424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"}]},"cv_name":"biological_process","definition":"An actin filament organization process that contributes to actomyosin contractile ring assembly during cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0008150","GO:0030036","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring assembly actin filament organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"actin filament organisation of constriction ring assembly","type":"related"},{"name":"actin filament organisation of contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"actin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of constriction ring assembly","type":"related"},{"name":"actin filament organization of contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:2000689","terms_by_termid":{"GO:0071520":null,"GO:1903479":null}}


id: PBO:0028508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposable_element-derived_small_RNA_level","termid":"PBO:0028508"}


id: GO:0009502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A series of membrane-linked oxidation-reduction reactions in which electrons are transferred from an initial electron donor through a series of intermediates to a final electron acceptor (usually oxygen).","definition_xrefs":["GOC:mtg_electron_transport","ISBN:0140514031"],"gene_count":0,"genotype_count":0,"name":"obsolete photosynthetic electron transport chain (obsolete GO:0009502)","synonyms":[{"name":"photosynthetic electron transport chain","type":"exact"}],"termid":"GO:0009502"}


id: GO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initiation of the activity of the inactive enzyme JUN kinase kinase kinase (JNKKK) activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of JNKKK activity (obsolete GO:0042655)","synonyms":[{"name":"activation of JUN kinase kinase kinase activity","type":"exact"},{"name":"positive regulation of JUNKKK activity","type":"broad"}],"termid":"GO:0042655"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: PBO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-11 (pseudogene)","termid":"PBO:0051193"}


id: RO:HOM0000037
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves a structure that has no other homologs in the species in which it is defined, and several homologous structures in another species.","definition_xrefs":["BGEE:curator"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_homology_relationship_with","synonyms":[{"name":"1 to many homologous to","type":"exact"},{"name":"1:many homology","type":"related"},{"name":"one-to-many homology","type":"exact"}],"termid":"RO:HOM0000037"}


id: SO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element involved in RNA stability found in the 3' UTR of some RNA (consensus UGUAAAUA).","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio_response_element","synonyms":[{"name":"PRE binding RNA","type":"exact"},{"name":"pumilio response element","type":"exact"}],"termid":"SO:0002234"}


id: GO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Unc13b (or orthologs thereof).","definition_xrefs":["PMID:8999968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Unc13 complex","synonyms":[{"name":"SNARE complex (Snap25, Syt1, Unc13b, Vamp2, Stx1b2, Stx1a)","type":"narrow"},{"name":"Snap25-Syt1-Unc13b-Vamp2-Stx1b2-Stx1a complex","type":"narrow"}],"termid":"GO:0070768"}


id: PBO:0078315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta constant","termid":"PBO:0078315"}


id: PBO:0077679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 10","termid":"PBO:0077679"}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: PBO:0080808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 4","termid":"PBO:0080808"}


id: PBO:0017451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-output_of","termid":"PBO:0017451"}


id: PBO:0086277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a possible role in tRNA export; shows similarity to 6-phosphogluconolactonase non-catalytic domains but does not exhibit this enzymatic activity; homologous to Sol3p and Sol4p; SOL2 has a paralog, SOL1, that arose from the whole genome duplication","termid":"PBO:0086277"}


id: GO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete avoidance of symbiont defenses (obsolete GO:0051858)","termid":"GO:0051858"}


id: PBO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 1","termid":"PBO:0044220"}


id: GO:0046197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orcinol (5-methyl-1,3-benzenediol), an aromatic compound derived from the fermentation of lichen and synthesized by some higher plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orcinol metabolic process","termid":"GO:0018940"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orcinol biosynthetic process","synonyms":[{"name":"orcinol anabolism","type":"exact"},{"name":"orcinol biosynthesis","type":"exact"},{"name":"orcinol formation","type":"exact"},{"name":"orcinol synthesis","type":"exact"}],"termid":"GO:0046197"}


id: GO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of a cell in the epidermis resulting in the formation of the mammary line. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["PMID:16168142","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wnt signaling pathway","termid":"GO:0016055"},{"relation_name":"part_of","term_name":"mammary gland specification","termid":"GO:0060594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway involved in mammary gland specification","synonyms":[{"name":"Wnt receptor signaling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt-activated signaling pathway involved in mammary gland specification","type":"exact"}],"termid":"GO:0060593"}


id: GO:0052356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:11085997"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall chitin (obsolete GO:0052356)","termid":"GO:0052356"}


id: PBO:0061593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK3 antisense RNA 1","termid":"PBO:0061593"}


id: GO:0051697
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87255],"is_not":false,"summary":null,"term":"GO:0051697"}]},"cv_name":"biological_process","definition":"The breakage of covalent bonds to detach lipid groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein delipidation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051697","terms_by_termid":{"GO:0051697":null}}


id: PBO:0047697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1","termid":"PBO:0047697"}


id: PBO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-differs_in","termid":"PBO:0034145"}


id: PBO:0053248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX2 antisense RNA 1","termid":"PBO:0053248"}


id: GO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrolipoamide, the reduced form of lipoamide, produced as an intermediate in the reactions in which lipoamide acts as a cofactor.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organonitrogen compound metabolic process","termid":"GO:1901564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dihydrolipoamide metabolic process","synonyms":[{"name":"dihydrolipoamide metabolism","type":"exact"},{"name":"dihydrolipoamide reduction","type":"narrow"},{"name":"dihydrothioctamide metabolic process","type":"exact"},{"name":"dihydrothioctamide metabolism","type":"exact"}],"termid":"GO:0051068"}


id: GO:0045026
data:
  {"annotated_genes":["SJAG_02924","SJAG_02351","SJAG_02878","SJAG_00870","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105478,87974,76641,90857,91919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032220"}]},"cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.","definition_xrefs":["GOC:elh","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00870":null,"SJAG_02351":null,"SJAG_02878":null,"SJAG_02924":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane fusion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"secondary_identifiers":["GO:0006947"],"synonyms":[{"name":"cell fusion","type":"broad"},{"name":"cell-cell fusion","type":"broad"}],"termid":"GO:0045026","terms_by_termid":{"GO:0032220":null}}


id: PBO:0060558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 2","termid":"PBO:0060558"}


id: PBO:0078395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 5-1","termid":"PBO:0078395"}


id: PBO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor corepressor 1","termid":"PBO:0060651"}


id: PBO:0082072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-phosphoglycerate kinase; catalyzes transfer of high-energy phosphoryl groups from the acyl phosphate of 1,3-bisphosphoglycerate to ADP to produce ATP; key enzyme in glycolysis and gluconeogenesis","termid":"PBO:0082072"}


id: PR:Q9UTD1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yth1 gene.","definition_xrefs":["UniProtKB:Q9UTD1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA 3'-end-processing protein yth1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.08c","synonyms":[{"name":"Spom972h-yth1","type":"exact"}],"termid":"PR:Q9UTD1"}


id: PBO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 3' to 5' DNA helicase (predicted)","termid":"PBO:0001347"}


id: GO:2000715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034182"},{"relation_name":"regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000715"}


id: GO:0019412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of hydrogen (H2) to water (H2O), using oxygen (O2) as the electron acceptor. A hydrogenase enzyme binds H2 and the hydrogen atoms are passed through an electron transfer chain to O2 to form water.","definition_xrefs":["MetaCyc:P283-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration, using hydrogen as electron donor","synonyms":[{"name":"hydrogen oxidation","type":"broad"}],"termid":"GO:0019412"}


id: PBO:0041549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 54","termid":"PBO:0041549"}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: PBO:0081279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF45 antisense RNA 1","termid":"PBO:0081279"}


id: PBO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein, splicing factor Cdc5","termid":"PBO:0001680"}


id: GO:1905296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GOC:BHF","GOC:rl","GO_REF:0000058","PMID:15073157","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of neural crest formation","termid":"GO:0090301"},{"relation_name":"is_a","term_name":"negative regulation of neural crest cell differentiation","termid":"GO:1905293"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"negatively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell fate specification","synonyms":[{"name":"down regulation of neural crest cell fate specification","type":"exact"},{"name":"down-regulation of neural crest cell fate specification","type":"exact"},{"name":"downregulation of neural crest cell fate specification","type":"exact"},{"name":"inhibition of neural crest cell fate specification","type":"narrow"}],"termid":"GO:1905296"}


id: SO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 2S rRNA is a 30 nucleotide RNA component of the large subunit of cytosolic ribosomes in Drosophila and at least some other Diptera. It is homologous to the 3' part of other 5.8S rRNA molecules. The 3' end of the 5.8S molecule is able to base-pair with the 5' end of the 2S rRNA to generate a helical region equivalent in position to the 'GC-rich hairpin' found in all previously sequenced 5.8S molecules.","definition_xrefs":["PMID:10788608","PMID:768488","PMID:407103","PMID:4847940"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_2S_gene","termid":"SO:0002336"},{"relation_name":"is_a","term_name":"cytosolic_LSU_rRNA","termid":"SO:0000651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_2S_rRNA","synonyms":[{"name":"cytosolic 2S rRNA","type":"exact"},{"name":"cytosolic rRNA 2S","type":"exact"}],"termid":"SO:0002337"}


id: GO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large, multimeric protein complex which catalyzes the biosynthesis of cellulose for the plant primary cell wall. In Arabidopsis, contains the essential component proteins CESA1 and -3, and a CESA6-related protein.","definition_xrefs":["PMID:17878302","PMID:21307367","GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose synthase complex","termid":"GO:0010330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"primary cell wall cellulose synthase complex","synonyms":[{"name":"primary cell wall CESA complex","type":"exact"},{"name":"primary cell-wall cellulose synthase complex","type":"exact"}],"termid":"GO:0044567"}


id: GO:0070851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a growth factor receptor.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"growth factor receptor binding","termid":"GO:0070851"}


id: PBO:0004326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family","termid":"PBO:0004326"}


id: PBO:0090105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom20","termid":"PBO:0090105"}


id: PBO:0038344
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-co-occurs","termid":"PBO:0038344"}


id: GO:1905717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"positively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cornification","synonyms":[{"name":"activation of cornification","type":"narrow"},{"name":"up regulation of cornification","type":"exact"},{"name":"up-regulation of cornification","type":"exact"},{"name":"upregulation of cornification","type":"exact"}],"termid":"GO:1905717"}


id: PBO:0073397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain and mariner transposase fusion gene","termid":"PBO:0073397"}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: PBO:0109126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 2","termid":"PBO:0109126"}


id: PBO:0050024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 2 (pseudogene)","termid":"PBO:0050024"}


id: SO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating trinucleotide sequence (three bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_microsatellite_feature","synonyms":[{"name":"dinucleotide repeat microsatellite marker","type":"related"},{"name":"rinucleotide repeat microsatellite","type":"exact"},{"name":"trinucleotide repeat microsatellite feature","type":"exact"},{"name":"trinucleotide repeat microsatellite locus","type":"exact"}],"termid":"SO:0000291"}


id: PATO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000074 shattering (obsolete PATO:0000074)","termid":"PATO:0000074"}


id: PBO:0045204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B14","termid":"PBO:0045204"}


id: GO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance P, the peptide Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"substance P receptor activity","termid":"GO:0016496"}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: GO:1902199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"},{"relation_name":"is_a","term_name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","termid":"GO:1902198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0006629","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) catabolic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) breakdown","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) catabolism","type":"exact"},{"name":"3-methylbut-2-enoyl-CoA(4-) degradation","type":"exact"}],"termid":"GO:1902199"}


id: GO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the adrenal cortex. This process pertains to the initial formation of a structure from unspecified parts. The adrenogonadal primordium from which the adrenal cortex is formed derives from a condensation of coelomic epithelial cells (the urogenital ridge; the same structure from which gonads and kidney also originate).","definition_xrefs":["PMID:12185666","PMID:21115154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"adrenal cortex development","termid":"GO:0035801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex formation","synonyms":[{"name":"adrenal gland cortex formation","type":"exact"}],"termid":"GO:0035802"}


id: PBO:0072961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin II","termid":"PBO:0072961"}


id: PBO:0047340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBN1 divergent transcript","termid":"PBO:0047340"}


id: GO:0006798
data:
  {"annotated_genes":["SJAG_00132","SJAG_03964","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70686,91355,110992],"is_not":false,"summary":null,"term":"GO:0006798"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a polyphosphate, the anion or salt of polyphosphoric acid.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyphosphate metabolic process","termid":"GO:0006797"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"organic substance catabolic process","termid":"GO:1901575"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00570":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"polyphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"polyphosphate breakdown","type":"exact"},{"name":"polyphosphate catabolism","type":"exact"},{"name":"polyphosphate degradation","type":"exact"}],"termid":"GO:0006798","terms_by_termid":{"GO:0006798":null}}


id: PBO:0028094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028094"}


id: PR:Q9UU82
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- are2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol O-acyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.05c","synonyms":[{"name":"Spom972h-are2","type":"exact"},{"name":"sterol-ester synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU82"}


id: GO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1/2)-unsubstituted naphthalenoid-(2/1)-sulfonate + 2 H+ + 2 e- + O2 = 1,2-dihydroxynaphthalene derivative + HSO3(-). Substrates include naphthalene-1,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate), naphthalene-1-sulfonate (forms 1,2-dihydroxynaphthalene), naphthalene-2,6-disulfonate (forms 1,2-dihydroxynaphthalene-6-sulfonate) and naphthalene-2-sulfonate (forms 1,2-dihydroxynaphthalene).","definition_xrefs":["UM-BBD_enzymeID:e0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"naphthalene disulfonate 1,2-dioxygenase activity","synonyms":[{"name":"naphthalene disulphonate 1,2-dioxygenase activity","type":"exact"}],"termid":"GO:0018689"}


id: GO:0061592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of osteoblasts, and contributes to bone mineralization.","definition_xrefs":["GOC:krc","PMID:22936354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane phospholipid scrambling","termid":"GO:0017121"},{"relation_name":"part_of","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"phosphatidylserine exposure on osteoblast involved in bone mineralization","termid":"GO:0061592"}


id: SO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one D-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_cluster","synonyms":[{"name":"D cluster","type":"exact"},{"name":"D-CLUSTER","type":"exact"}],"termid":"SO:0000559"}


id: PBO:0055804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 6","termid":"PBO:0055804"}


id: PBO:0041526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 87","termid":"PBO:0041526"}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: GO:0033147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"negatively_regulates","term_name":"intracellular estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"negative regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"negative regulation of estrogen receptor signalling pathway","type":"exact"}],"termid":"GO:0033147"}


id: GO:0034939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypyrrole-2-carboxylate = 5-oxo-4,5-dihydropyrrole-2-carboxylate.","definition_xrefs":["UM-BBD_reactionID:r0969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"5-hydroxypyrrole-2-carboxylate tautomerase activity","termid":"GO:0034939"}


id: FYPO:0006474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to starvation for one or more amino acids is abnormal.","definition_xrefs":["PMID:29432178","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of translation in response to amino acid starvation","synonyms":[{"name":"abnormal regulation of translation during cellular response to amino acid starvation","type":"exact"},{"name":"abnormal regulation of translation in response to amino acid starvation during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of translation in response to amino acid starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0006474"}


id: GO:0015363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dicarboxylate (succinate/fumarate/malate) antiporter activity (obsolete GO:0015363)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"exact"}],"termid":"GO:0015363"}


id: GO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell development","termid":"GO:0072142"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell development","termid":"GO:0061229"}


id: PBO:0077481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 201","termid":"PBO:0077481"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PBO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor Def1 (predicted)","termid":"PBO:0003246"}


id: GO:0042816
data:
  {"annotated_genes":["SJAG_00252","SJAG_01543","SJAG_00691","SJAG_01881","SJAG_00707","SJAG_01383","SJAG_00283","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94533],"is_not":false,"summary":null,"term":"GO:0042816"},{"annotations":[88436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[74626,76911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[109580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[83489,74716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[74714,83491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[77294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[96342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of the vitamin B6 compounds: pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"vitamin B6 metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"vitamin B6 metabolism","type":"exact"}],"termid":"GO:0042816","terms_by_termid":{"GO:0008614":null,"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_mitosis","termid":"PBO:0036185"}


id: GO:0034907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetanilide + O2 + 2 H+ + NADH = catechol + NAD+ + acetamide.","definition_xrefs":["UM-BBD_reactionID:r0723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"acetanilide 1,2-dioxygenase activity","secondary_identifiers":["EC:1.14.12.-"],"termid":"GO:0034907"}


id: PBO:0078490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 9-1","termid":"PBO:0078490"}


id: PBO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 15","termid":"PBO:0071392"}


id: PBO:0069590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 864, pseudogene","termid":"PBO:0069590"}


id: FYPO:0003280
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003197"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation","termid":"FYPO:0006209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during copper ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during vegetative growth","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003280"}


id: GO:0001755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo.","definition_xrefs":["GOC:tb","ISBN:0878932437","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell migration","termid":"GO:0090497"},{"relation_name":"part_of","term_name":"neural crest cell development","termid":"GO:0014032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration","termid":"GO:0001755"}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: GO:0097038
data:
  {"annotated_genes":["SJAG_04049","SJAG_04059","SJAG_01227","SJAG_01722","SJAG_03750","SJAG_03609","SJAG_00825","SJAG_01785","SJAG_03162","SJAG_04883","SJAG_04583","SJAG_00790","SJAG_00355","SJAG_01329","SJAG_02532","SJAG_03281","SJAG_04578","SJAG_03943","SJAG_01422"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71449,73079,74101,84218,84494,102738,105203,105733,109126,109376,109590,113906],"is_not":false,"summary":null,"term":"GO:0097038"},{"annotations":[88696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099020"},{"annotations":[96063,90299,94167,83137,101688,93332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"}]},"cv_name":"cellular_component","definition":"The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.","definition_xrefs":["GOC:pr","GOC:mcc","GOC:vw","GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01227":null,"SJAG_01329":null,"SJAG_01422":null,"SJAG_01722":null,"SJAG_01785":null,"SJAG_02532":null,"SJAG_03162":null,"SJAG_03281":null,"SJAG_03609":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04578":null,"SJAG_04583":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"perinuclear endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"synonyms":[{"name":"perinuclear ER","type":"exact"}],"termid":"GO:0097038","terms_by_termid":{"GO:0097038":null,"GO:0099020":null,"GO:1990578":null}}


id: GO:0003235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sinus venosus over time, from its formation to the mature structure. The sinus venosus is a heart chamber attached to the atrium on the venous side of the embryonic heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinus venosus development","termid":"GO:0003235"}


id: GO:0071262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"part_of","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation in response to starvation","synonyms":[{"name":"regulation of translational initiation in response to nutrient starvation","type":"exact"}],"termid":"GO:0071262"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: PBO:0062016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 6 pseudogene","termid":"PBO:0062016"}


id: FYPO:0003158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"},{"relation_name":"is_a","term_name":"abolished actin filament bundle assembly","termid":"FYPO:0006026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abolished actin cable assembly","synonyms":[{"name":"abolished actin bundling","type":"related"},{"name":"abolished actin cable assembly during mitotic cell cycle","type":"related"},{"name":"abolished actin cable assembly during vegetative growth","type":"exact"},{"name":"abolished formin-nucleated actin cable assembly","type":"exact"},{"name":"actin bundling absent","type":"related"},{"name":"actin cable assembly abolished","type":"exact"}],"termid":"FYPO:0003158"}


id: PBO:0057545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 661","termid":"PBO:0057545"}


id: GO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by circulating epinephrine","synonyms":[{"name":"positive regulation of heart rate by circulating adrenaline","type":"exact"}],"termid":"GO:0003111"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74102],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol.","definition_xrefs":["EC:2.3.1.158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"PMID:21873635":null},"secondary_identifiers":["RHEA:14057","MetaCyc:2.3.1.158-RXN"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: PBO:0017766
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M Twenty Six binding protein","termid":"PBO:0017766"}


id: GO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiogenesis","termid":"GO:0045765"}


id: GO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a long or persistent exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to long exposure to lithium ion (obsolete GO:0043460)","synonyms":[{"name":"response to long exposure to lithium ion","type":"exact"}],"termid":"GO:0043460"}


id: PBO:0091293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA initiator Methionine","termid":"PBO:0091293"}


id: PBO:0082024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyxin pseudogene 1","termid":"PBO:0082024"}


id: PBO:0024840
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae DSS1","termid":"PBO:0024840"}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: GO:0030922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(E)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.","definition_xrefs":["RESID:AA0365","PMID:12623015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-tyrosine dehydrogenation","termid":"GO:0018251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dehydrogenation to form (E)-2,3-didehydrotyrosine","termid":"GO:0030922"}


id: FYPO:0004914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit differs from normal.","definition_xrefs":["PMID:18157152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal telomeric repeat sequence","termid":"FYPO:0004914"}


id: CHEBI:16240
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide","termid":"CHEBI:16240"}


id: GO:1900373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:TermGenie","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"positive regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"activation of purine nucleotide anabolism","type":"exact"},{"name":"activation of purine nucleotide biosynthesis","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of purine nucleotide formation","type":"exact"},{"name":"activation of purine nucleotide synthesis","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of purine nucleotide formation","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis","type":"exact"},{"name":"up regulation of purine nucleotide anabolism","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of purine nucleotide formation","type":"exact"},{"name":"up regulation of purine nucleotide synthesis","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of purine nucleotide formation","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis","type":"exact"},{"name":"upregulation of purine nucleotide anabolism","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of purine nucleotide formation","type":"exact"},{"name":"upregulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900373"}


id: PBO:0031331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_canavanine","termid":"PBO:0031331"}


id: PR:O74973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4B4.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.12c","synonyms":[{"name":"Spom972h-SPBC4B4.12c","type":"exact"}],"termid":"PR:O74973"}


id: PBO:0035825
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_ubiquitination_during_vegetative_growth","termid":"PBO:0035825"}


id: PBO:0005124
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1 mediated H3 K4 methylation is preferentially enriched at euchromatic loci","termid":"PBO:0005124"}


id: PBO:0090376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr4 homolog 2 Tsr402","termid":"PBO:0090376"}


id: PBO:0003544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT II complex subunit Dot2","termid":"PBO:0003544"}


id: PBO:0018212
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NARP","termid":"PBO:0018212"}


id: GO:0033475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an amino acid or polypeptide through an amide bond.","definition_xrefs":["GOC:mah","MetaCyc:PWY-1782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid conjugate biosynthetic process","termid":"GO:0033474"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid amide conjugate biosynthetic process","synonyms":[{"name":"IAA amide conjugate biosynthetic process","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indole acetic acid amide conjugate biosynthetic process","type":"exact"},{"name":"indoleacetic acid amide conjugate anabolism","type":"exact"},{"name":"indoleacetic acid amide conjugate biosynthesis","type":"exact"},{"name":"indoleacetic acid amide conjugate formation","type":"exact"},{"name":"indoleacetic acid amide conjugate synthesis","type":"exact"}],"termid":"GO:0033475"}


id: PBO:0056167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic arrest deficient 2 like 2","termid":"PBO:0056167"}


id: PBO:0074382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG5 nonsense mediated mRNA decay factor","termid":"PBO:0074382"}


id: PBO:0076309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 1","termid":"PBO:0076309"}


id: SO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The in-frame interval between the stop codons of a reading frame which when read as sequential triplets, has the potential of encoding a sequential string of amino acids. TER(NNN)nTER.","definition_xrefs":["SO:ma","SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF","synonyms":[{"name":"open reading frame","type":"exact"}],"termid":"SO:0000236"}


id: GO:0036443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + dermatan = adenosine 3',5'-bisphosphate + dermatan 6'-sulfate.","definition_xrefs":["GOC:bf","KEGG_REACTION:R07288","EC:2.8.2.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"dermatan 6-sulfotransferase activity","termid":"GO:0036443"}


id: GO:0034361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:expert_pt","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich plasma lipoprotein particle","termid":"GO:0034385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"very-low-density lipoprotein particle","synonyms":[{"name":"VLDL complex","type":"exact"},{"name":"VLDL particle","type":"exact"},{"name":"very-low-density lipoprotein complex","type":"exact"}],"termid":"GO:0034361"}


id: PBO:0054663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2069","termid":"PBO:0054663"}


id: PBO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1 (predicted)","termid":"PBO:0018125"}


id: PR:Q4ZGE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8C9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q4ZGE1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0618 protein C8C9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.19","synonyms":[{"name":"Spom972h-SPAC8C9.19","type":"exact"}],"termid":"PR:Q4ZGE1"}


id: GO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + H2O = NH4 + phenol + pyruvate.","definition_xrefs":["EC:4.1.99.2","RHEA:21704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"tyrosine phenol-lyase activity","secondary_identifiers":["MetaCyc:TYROSINE-PHENOL-LYASE-RXN","KEGG_REACTION:R00728"],"synonyms":[{"name":"L-tyrosine phenol-lyase (deaminating)","type":"related"},{"name":"L-tyrosine phenol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-tyrosinase activity","type":"related"}],"termid":"GO:0050371"}


id: GO:0010370
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromocenter adjacent to the nucleolus.","definition_xrefs":["PMID:15805479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromocenter","termid":"GO:0010369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perinucleolar chromocenter","termid":"GO:0010370"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:10640599","PMID:25639242","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: PBO:0051990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 2","termid":"PBO:0051990"}


id: GO:0006064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucuronate, any salt or ester of glucuronic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glucuronate catabolic process","synonyms":[{"name":"glucuronate breakdown","type":"exact"},{"name":"glucuronate catabolism","type":"exact"},{"name":"glucuronate degradation","type":"exact"}],"termid":"GO:0006064"}


id: GO:0106373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyglucosone + H2O + NAD+ = 2-dehydro-3-deoxy-D-gluconate + 2 H+ + NADH.","definition_xrefs":["PMID:17175089","RHEA:67244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-deoxyglucosone dehydrogenase activity","termid":"GO:0106373"}


id: GO:0044629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of complement activation by the classical pathway, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of complement activation, classical pathway in another organism (obsolete GO:0044629)","synonyms":[{"name":"negative regulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044629"}


id: PBO:0078413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (CCC) 7-1","termid":"PBO:0078413"}


id: PBO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 5","termid":"PBO:0052613"}


id: GO:0000454
data:
  {"annotated_genes":["SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74043],"is_not":false,"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of pseudouridylation.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01234":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"snoRNA guided rRNA pseudouridine synthesis","references_by_uniquename":{"PMID:21873635":null},"termid":"GO:0000454","terms_by_termid":{"GO:0000454":null}}


id: PBO:0049601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 4","termid":"PBO:0049601"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN","KEGG_REACTION:R01174"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: GO:0098552
data:
  {"annotated_genes":["SJAG_04509","SJAG_02260","SJAG_02173","SJAG_02093","SJAG_04018","SJAG_04483","SJAG_00310","SJAG_02435","SJAG_05272","SJAG_01242","SJAG_04238","SJAG_01114","SJAG_00415","SJAG_02587","SJAG_04732","SJAG_00797","SJAG_01086","SJAG_01029","SJAG_00948","SJAG_05207","SJAG_05268","SJAG_03081","SJAG_02989","SJAG_00368","SJAG_04666","SJAG_00109","SJAG_03640","SJAG_02233","SJAG_04363","SJAG_00254","SJAG_03204","SJAG_04685","SJAG_01307","SJAG_00340","SJAG_04851","SJAG_04789","SJAG_01738","SJAG_04875","SJAG_04026","SJAG_02444","SJAG_01835","SJAG_04850","SJAG_02916","SJAG_00218","SJAG_01774","SJAG_00077","SJAG_03596","SJAG_04077","SJAG_02196","SJAG_00096","SJAG_01290","SJAG_02605","SJAG_04209","SJAG_01249","SJAG_03464","SJAG_00784","SJAG_01806","SJAG_03345","SJAG_00852","SJAG_01134","SJAG_02392","SJAG_00605","SJAG_04266"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[83825,104605],"is_not":false,"summary":null,"term":"GO:0098552"},{"annotations":[101199,90649,105137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[94758,100198,110905,95990,99864,97932,101946,84970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[85423,99133,88188,83644,88026,102390,106123,97851,94484,75557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[101948,91404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[97677,97683,90426,108249,97684,89653,109560,109661,109928,111411,90842,113384,113806,90427,110736,112436,90413,87216,99409,112858,101917,85813,103119,90425,108944,85619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009897"},{"annotations":[105810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[99170,95925],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099616"},{"annotations":[89813,102482,104319,109034,101849],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[95262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098553"},{"annotations":[89418,85653,91799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099617"}]},"cv_name":"cellular_component","definition":"A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00077":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00218":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00368":null,"SJAG_00415":null,"SJAG_00605":null,"SJAG_00784":null,"SJAG_00797":null,"SJAG_00852":null,"SJAG_00948":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01114":null,"SJAG_01134":null,"SJAG_01242":null,"SJAG_01249":null,"SJAG_01290":null,"SJAG_01307":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01806":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02173":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02260":null,"SJAG_02392":null,"SJAG_02435":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02916":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03204":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_03640":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04266":null,"SJAG_04363":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04685":null,"SJAG_04732":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05207":null,"SJAG_05268":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"side of membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21873635":null},"termid":"GO:0098552","terms_by_termid":{"GO:0005834":null,"GO:0009897":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098552":null,"GO:0098553":null,"GO:0098554":null,"GO:0099616":null,"GO:0099617":null,"GO:0106186":null}}


id: PBO:0078732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-1","termid":"PBO:0078732"}


id: PBO:0074947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111","termid":"PBO:0074947"}


id: PBO:0091804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, non-coding RNA (predicted)","termid":"PBO:0091804"}


id: PBO:0002737
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.3","termid":"PBO:0002737"}


id: GO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + an alcohol = CoA + a butyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"},{"relation_name":"is_a","term_name":"O-butanoyltransferase activity","termid":"GO:0034323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alcohol O-butanoyltransferase activity","termid":"GO:0034319"}


id: PBO:0018275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVE domain (PUA-related) protein","termid":"PBO:0018275"}


id: MOD:01882
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the carbonyl of an amino acid residue at position n with the alpha amino of a glycine residue at position n+2 to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"}


id: GO:0006253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dCTP, deoxycytidine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009213"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide catabolic process","termid":"GO:0009223"},{"relation_name":"is_a","term_name":"dCTP metabolic process","termid":"GO:0046065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"dCTP catabolic process","synonyms":[{"name":"dCTP breakdown","type":"exact"},{"name":"dCTP catabolism","type":"exact"},{"name":"dCTP degradation","type":"exact"}],"termid":"GO:0006253"}


id: PBO:0070858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 11","termid":"PBO:0070858"}


id: PATO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000717 viability value (obsolete PATO:0000717)","termid":"PATO:0000717"}


id: FYECO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any aspect of an experiment that the experimenter controls and that does not depend on which strain/organism/cells are used.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fission yeast phenotype condition","synonyms":[{"name":"phenotype condition","type":"related"}],"termid":"FYECO:0000001"}


id: GO:0060467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fertilization","termid":"GO:0060467"}


id: FYPO:0001859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased minichromosome loss","synonyms":[{"name":"minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001859"}


id: PR:Q9P782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activator of 90 kDa heat shock protein ATPase homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03151","PANTHER:PTHR13009:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1711.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.08","secondary_identifiers":["UniProtKB:Q9P782"],"synonyms":[{"name":"Spom972h-AHSA1","type":"exact"}],"termid":"PR:Q9P782"}


id: PBO:0089279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0089279"}


id: GO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of the zonula adherens, a cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction assembly","termid":"GO:0034333"},{"relation_name":"part_of","term_name":"apical junction assembly","termid":"GO:0043297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"zonula adherens assembly","termid":"GO:0045186"}


id: GO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the hormones modulates the force of heart muscle contraction. A hormone is one of a group of substances formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells, in the same organism, upon which they have a specific regulatory action.","definition_xrefs":["GOC:rl","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hormonal regulation of the force of heart contraction","synonyms":[{"name":"hormonal cardiac inotropy","type":"exact"},{"name":"hormonal regulation of the force of heart muscle contraction","type":"related"}],"termid":"GO:0003058"}


